npm - kb-core - Versions diffs - 0.1.0 → 0.1.2 - Mend

kb-core 0.1.0 → 0.1.2

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Files changed (4) hide show

package/dist/index.cjs.map +1 -1
package/dist/index.js.map +1 -1
package/dist/source-reader.d.ts.map +1 -1
package/package.json +1 -3

package/dist/index.cjs.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"sources":["../src/index.ts","../src/init.ts","../src/config.ts","../src/project.ts","../src/db.ts","../src/markdown.ts","../src/indexer.ts","../src/search.ts","../src/source-reader.ts","../src/llm.ts","../src/ingest.ts","../src/query.ts","../src/lint.ts","../src/log-parser.ts"],"sourcesContent":["// Core package — business logic\n\nexport const VERSION = \"0.1.0\";\n\nexport { initProject } from \"./init.js\";\nexport type { InitOptions } from \"./init.js\";\n\nexport { parseConfig } from \"./config.js\";\nexport type { KbConfig } from \"./config.js\";\n\nexport { loadProject, tryLoadProject } from \"./project.js\";\nexport type { Project } from \"./project.js\";\n\nexport { openDb, closeDb } from \"./db.js\";\n\nexport { parsePage } from \"./markdown.js\";\nexport type { ParsedPage } from \"./markdown.js\";\n\nexport { indexProject } from \"./indexer.js\";\nexport type { IndexStats } from \"./indexer.js\";\n\nexport { searchWiki } from \"./search.js\";\nexport type { SearchResult, SearchOptions } from \"./search.js\";\n\nexport { readSource } from \"./source-reader.js\";\nexport type { SourceContent, SourceType } from \"./source-reader.js\";\n\nexport { createLlmAdapter } from \"./llm.js\";\nexport type { LlmAdapter, LlmMessage } from \"./llm.js\";\n\nexport type { IngestResult } from \"./ingest-types.js\";\n\nexport { ingestSource } from \"./ingest.js\";\nexport type { IngestOptions, IngestPlan } from \"./ingest.js\";\n\nexport { queryWiki } from \"./query.js\";\nexport type { QueryResult, QueryOptions } from \"./query.js\";\n\nexport { lintProject } from \"./lint.js\";\nexport type { LintIssue, LintResult, LintSeverity } from \"./lint.js\";\n\nexport { parseLogEntries } from \"./log-parser.js\";\nexport type { ParsedLogEntry } from \"./log-parser.js\";\n","import { mkdir, writeFile, access, rm } from \"node:fs/promises\";\nimport { join, basename } from \"node:path\";\nimport TOML from \"@iarna/toml\";\n\nexport interface InitOptions {\n name: string;\n directory: string; // absolute path where to init\n}\n\nfunction resolveProjectName(options: InitOptions): string {\n return options.name \|\| basename(options.directory);\n}\n\nfunction buildConfigToml(projectName: string): string {\n const config = {\n project: {\n name: projectName,\n version: \"0.1.0\",\n },\n directories: {\n sources: \"sources\",\n wiki: \"wiki\",\n },\n llm: {\n provider: \"anthropic\",\n model: \"claude-sonnet-4-20250514\",\n },\n };\n\n const tomlStr = TOML.stringify(config as TOML.JsonMap);\n return (\n tomlStr +\n '\\n[dependencies]\\n# shared-glossary = { path = \"../shared-glossary\" }\\n'\n );\n}\n\nfunction buildSchemaMd(): string {\n return `# KB Schema — LLM Instructions\n\nThis file defines the conventions for this knowledge base. The \\`kb\\` CLI and any\nLLM operating on this wiki MUST follow these rules.\n\n---\n\n## Wiki Structure Conventions\n\n- All pages live under the \\`wiki/\\` directory.\n- \\`wiki/_index.md\\` is the wiki root and serves as a table of contents.\n- Sub-topics may be organised into sub-directories: \\`wiki/<topic>/_index.md\\`.\n- File names use kebab-case, e.g. \\`wiki/authentication-flow.md\\`.\n- Every page must have a valid YAML frontmatter block.\n\n---\n\n## Frontmatter Schema\n\nEvery wiki page must begin with a YAML frontmatter block:\n\n\\`\\`\\`yaml\n---\ntitle: <Human-readable page title>\ntags: [tag1, tag2] # optional; array of lowercase strings\ncreated: <ISO 8601 date> # e.g. 2026-04-05\nupdated: <ISO 8601 date> # updated whenever content changes\nsource: <path or URL> # optional; original source material\n---\n\\`\\`\\`\n\nRequired fields: \\`title\\`, \\`created\\`.\n\n---\n\n## Page Templates\n\n### Entity Page\nUse for: people, systems, services, tools.\n\n\\`\\`\\`markdown\n---\ntitle: <Entity Name>\ntags: [entity]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# <Entity Name>\n\nType: <system \| person \| service \| tool>\n\n## Overview\n\n<One-paragraph description.>\n\n## Key Attributes\n\n- Attribute: value\n\n## Related\n\n- [[related-page]]\n\\`\\`\\`\n\n### Concept Page\nUse for: ideas, patterns, terminology.\n\n\\`\\`\\`markdown\n---\ntitle: <Concept Name>\ntags: [concept]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# <Concept Name>\n\n## Definition\n\n<Clear definition in 1-3 sentences.>\n\n## Context\n\n<When and why this concept matters in the project.>\n\n## See Also\n\n- [[related-concept]]\n\\`\\`\\`\n\n### Source Summary Page\nUse for: summarised source material (docs, papers, meetings).\n\n\\`\\`\\`markdown\n---\ntitle: Summary — <Source Title>\ntags: [source-summary]\ncreated: <ISO date>\nsource: <path or URL>\n---\n\n# Summary — <Source Title>\n\n## Key Points\n\n- Point one\n- Point two\n\n## Decisions / Implications\n\n<What this source means for the project.>\n\n## Raw Source\n\nSee \\`sources/<filename>\\`.\n\\`\\`\\`\n\n### Comparison Page\nUse for: side-by-side evaluation of options.\n\n\\`\\`\\`markdown\n---\ntitle: Comparison — <Topic>\ntags: [comparison]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# Comparison — <Topic>\n\n\| Criterion \| Option A \| Option B \|\n\|-----------\|----------\|----------\|\n\| ... \| ... \| ... \|\n\n## Recommendation\n\n<Which option and why.>\n\\`\\`\\`\n\n---\n\n## Wikilink Conventions\n\n- Basic link: \\`[[page-name]]\\` — links to \\`wiki/page-name.md\\`.\n- Display text: \\`[[page-name\|display text]]\\` — renders as \"display text\".\n- Cross-directory: \\`[[topic/sub-page]]\\`.\n- All wikilink targets must be lowercase kebab-case matching the file name without \\`.md\\`.\n\n---\n\n## Ingest Workflow\n\n1. Place the source file in \\`sources/\\` (PDF, Markdown, plain text, etc.).\n2. Run \\`kb ingest sources/<filename>\\`.\n3. The CLI reads the file, calls the configured LLM, and generates a source-summary\n page in \\`wiki/\\`.\n4. The summary page is linked from \\`wiki/_index.md\\` under Sources.\n5. An entry is appended to \\`log.md\\`.\n\n---\n\n## Query Workflow\n\n1. Run \\`kb query \"<natural-language question>\"\\`.\n2. The CLI searches the wiki index for relevant pages.\n3. Relevant page content is assembled into a prompt context.\n4. The LLM answers the question, citing wikilinks.\n5. The answer is printed to stdout. Nothing is written to disk unless \\`--save\\` is passed.\n\n---\n\n## Lint Workflow\n\nRun \\`kb lint\\` to check for:\n\n- Pages missing required frontmatter fields (\\`title\\`, \\`created\\`).\n- Broken wikilinks (targets that don't resolve to an existing page).\n- Pages not reachable from \\`wiki/_index.md\\`.\n- Duplicate page titles across the wiki.\n- Frontmatter fields with invalid types or formats.\n\nLint exits with code 0 on success, 1 if errors are found.\n`;\n}\n\nfunction buildIndexMd(projectName: string, isoDate: string): string {\n return `---\ntitle: ${projectName} Knowledge Base\ncreated: ${isoDate}\n---\n\n# ${projectName} Knowledge Base\n\n> This wiki is maintained by the \\`kb\\` CLI tool.\n\n## Pages\n\n(No pages yet. Use \\`kb ingest <source>\\` to add content.)\n\n## Sources\n\n(No sources yet.)\n`;\n}\n\nfunction buildLogMd(projectName: string, isoDate: string): string {\n return `# Activity Log\n\n## ${isoDate} — Project initialized\n\nProject \\`${projectName}\\` initialized.\n`;\n}\n\nasync function kbDirExists(directory: string): Promise<boolean> {\n try {\n await access(join(directory, \".kb\"));\n return true;\n } catch {\n return false;\n }\n}\n\nexport async function initProject(options: InitOptions): Promise<void> {\n const projectName = resolveProjectName(options);\n const { directory } = options;\n\n if (await kbDirExists(directory)) {\n throw new Error(\n `Knowledge base already initialized: .kb/ already exists in ${directory}`,\n );\n }\n\n const isoDate = new Date().toISOString().split(\"T\")[0]!;\n\n try {\n await Promise.all([\n mkdir(join(directory, \".kb\"), { recursive: true }),\n mkdir(join(directory, \"sources\"), { recursive: true }),\n mkdir(join(directory, \"wiki\"), { recursive: true }),\n ]);\n\n await Promise.all([\n writeFile(\n join(directory, \".kb\", \"config.toml\"),\n buildConfigToml(projectName),\n \"utf8\",\n ),\n writeFile(join(directory, \".kb\", \"schema.md\"), buildSchemaMd(), \"utf8\"),\n writeFile(join(directory, \"sources\", \".gitkeep\"), \"\", \"utf8\"),\n writeFile(\n join(directory, \"wiki\", \"_index.md\"),\n buildIndexMd(projectName, isoDate),\n \"utf8\",\n ),\n writeFile(\n join(directory, \"log.md\"),\n buildLogMd(projectName, isoDate),\n \"utf8\",\n ),\n ]);\n } catch (error) {\n // Rollback: remove .kb/ if it was created\n await rm(join(directory, \".kb\"), { recursive: true, force: true });\n throw error;\n }\n}\n","import { readFile } from \"node:fs/promises\";\nimport TOML from \"@iarna/toml\";\n\nexport interface KbConfig {\n project: {\n name: string;\n version: string;\n };\n directories: {\n sources: string;\n wiki: string;\n };\n llm: {\n provider: \"anthropic\" \| \"openai\" \| \"ollama\";\n model: string;\n };\n dependencies: Record<\n string,\n { path?: string; git?: string; branch?: string; mode?: string }\n >;\n}\n\nconst VALID_PROVIDERS = [\"anthropic\", \"openai\", \"ollama\"] as const;\n\nfunction requireSafeRelativePath(val: string, field: string): void {\n if (val.startsWith(\"/\") \|\| val.split(\"/\").includes(\"..\")) {\n throw new Error(\n `Invalid config: ${field} must be a safe relative path, got \"${val}\"`,\n );\n }\n}\n\nfunction requireString(\n obj: Record<string, unknown>,\n key: string,\n context: string,\n): string {\n const val = obj[key];\n if (typeof val !== \"string\" \|\| val.trim() === \"\") {\n throw new Error(\n `Invalid config: missing required field \"${context}.${key}\"`,\n );\n }\n return val;\n}\n\nfunction requireSection(\n obj: Record<string, unknown>,\n key: string,\n): Record<string, unknown> {\n const val = obj[key];\n if (\n val === undefined \|\|\n val === null \|\|\n typeof val !== \"object\" \|\|\n Array.isArray(val)\n ) {\n throw new Error(`Invalid config: missing required section \"[${key}]\"`);\n }\n return val as Record<string, unknown>;\n}\n\nexport async function parseConfig(configPath: string): Promise<KbConfig> {\n let raw: string;\n try {\n raw = await readFile(configPath, \"utf8\");\n } catch (err: unknown) {\n const message = err instanceof Error ? err.message : String(err);\n throw new Error(`Config file not found: ${configPath}\\n${message}`);\n }\n\n let parsed: Record<string, unknown>;\n try {\n parsed = TOML.parse(raw) as Record<string, unknown>;\n } catch (err: unknown) {\n const message = err instanceof Error ? err.message : String(err);\n throw new Error(`Invalid TOML in config file ${configPath}: ${message}`);\n }\n\n const project = requireSection(parsed, \"project\");\n const name = requireString(project, \"name\", \"project\");\n const version = requireString(project, \"version\", \"project\");\n\n const directories = requireSection(parsed, \"directories\");\n const sources = requireString(directories, \"sources\", \"directories\");\n requireSafeRelativePath(sources, \"directories.sources\");\n const wiki = requireString(directories, \"wiki\", \"directories\");\n requireSafeRelativePath(wiki, \"directories.wiki\");\n\n const llm = requireSection(parsed, \"llm\");\n const providerRaw = requireString(llm, \"provider\", \"llm\");\n if (!(VALID_PROVIDERS as readonly string[]).includes(providerRaw)) {\n throw new Error(\n `Invalid config: llm.provider must be one of ${VALID_PROVIDERS.join(\", \")}, got \"${providerRaw}\"`,\n );\n }\n const provider = providerRaw as KbConfig[\"llm\"][\"provider\"];\n const model = requireString(llm, \"model\", \"llm\");\n\n const rawDeps = parsed[\"dependencies\"];\n const dependencies: KbConfig[\"dependencies\"] = {};\n if (\n rawDeps !== undefined &&\n rawDeps !== null &&\n typeof rawDeps === \"object\" &&\n !Array.isArray(rawDeps)\n ) {\n for (const [depKey, depVal] of Object.entries(\n rawDeps as Record<string, unknown>,\n )) {\n if (\n typeof depVal === \"object\" &&\n depVal !== null &&\n !Array.isArray(depVal)\n ) {\n const dep = depVal as Record<string, unknown>;\n dependencies[depKey] = {\n ...(typeof dep[\"path\"] === \"string\" ? { path: dep[\"path\"] } : {}),\n ...(typeof dep[\"git\"] === \"string\" ? { git: dep[\"git\"] } : {}),\n ...(typeof dep[\"branch\"] === \"string\"\n ? { branch: dep[\"branch\"] }\n : {}),\n ...(typeof dep[\"mode\"] === \"string\" ? { mode: dep[\"mode\"] } : {}),\n };\n }\n }\n }\n\n return {\n project: { name, version },\n directories: { sources, wiki },\n llm: { provider, model },\n dependencies,\n };\n}\n","import { access } from \"node:fs/promises\";\nimport { join, dirname, resolve } from \"node:path\";\nimport { parseConfig, type KbConfig } from \"./config.js\";\n\nexport interface Project {\n name: string;\n root: string;\n kbDir: string;\n sourcesDir: string;\n wikiDir: string;\n config: KbConfig;\n}\n\nasync function hasKbDir(dir: string): Promise<boolean> {\n try {\n await access(join(dir, \".kb\", \"config.toml\"));\n return true;\n } catch {\n return false;\n }\n}\n\nasync function findProjectRoot(startDir: string): Promise<string \| null> {\n let current = resolve(startDir);\n\n while (true) {\n if (await hasKbDir(current)) {\n return current;\n }\n const parent = dirname(current);\n if (parent === current) {\n // Reached filesystem root\n return null;\n }\n current = parent;\n }\n}\n\nexport async function loadProject(startDir: string): Promise<Project> {\n const root = await findProjectRoot(startDir);\n if (root === null) {\n throw new Error(\n `No kb project found. Run \"kb init\" to initialize a knowledge base in the current directory.`,\n );\n }\n\n const kbDir = join(root, \".kb\");\n const configPath = join(kbDir, \"config.toml\");\n const config = await parseConfig(configPath);\n\n return {\n name: config.project.name,\n root,\n kbDir,\n sourcesDir: join(root, config.directories.sources),\n wikiDir: join(root, config.directories.wiki),\n config,\n };\n}\n\nexport async function tryLoadProject(\n startDir: string,\n): Promise<Project \| null> {\n try {\n return await loadProject(startDir);\n } catch (err: unknown) {\n if (err instanceof Error && /no kb project found/i.test(err.message)) {\n return null;\n }\n throw err;\n }\n}\n","import Database from \"better-sqlite3\";\nimport { join } from \"node:path\";\nimport type { Project } from \"./project.js\";\n\nconst SCHEMA_SQL = `\nCREATE VIRTUAL TABLE IF NOT EXISTS pages USING fts5(\n path,\n title,\n content,\n tags,\n project,\n tokenize='porter unicode61'\n);\n\nCREATE TABLE IF NOT EXISTS page_meta (\n path TEXT PRIMARY KEY,\n sha256 TEXT NOT NULL,\n mtime INTEGER NOT NULL,\n word_count INTEGER NOT NULL DEFAULT 0,\n frontmatter TEXT NOT NULL DEFAULT '{}',\n outgoing_links TEXT NOT NULL DEFAULT '[]',\n updated_at INTEGER NOT NULL\n);\n`;\n\nexport function openDb(project: Project): Database.Database {\n const dbPath = join(project.kbDir, \"index.db\");\n const db = new Database(dbPath);\n db.pragma(\"journal_mode = WAL\");\n db.exec(SCHEMA_SQL);\n return db;\n}\n\nexport function closeDb(db: Database.Database): void {\n db.close();\n}\n","import { readFile } from \"node:fs/promises\";\nimport matter from \"gray-matter\";\n\nexport interface ParsedPage {\n path: string;\n title: string;\n content: string;\n tags: string;\n frontmatter: Record<string, unknown>;\n outgoingLinks: string[];\n wordCount: number;\n}\n\nconst WIKILINK_RE = /\\[\\[([^\\]\|]+)(?:\\\|[^\\]]+)?\\]\\]/g;\nconst H1_RE = /^#\\s+(.+)$/m;\n\nfunction extractTitle(\n fm: Record<string, unknown>,\n content: string,\n relativePath: string,\n): string {\n if (typeof fm[\"title\"] === \"string\" && fm[\"title\"].trim() !== \"\") {\n return fm[\"title\"].trim();\n }\n const h1Match = H1_RE.exec(content);\n if (h1Match) {\n return h1Match[1]!.trim();\n }\n // Fallback: use filename without extension\n const filename = relativePath.split(\"/\").pop() ?? relativePath;\n return filename.replace(/\\.md$/i, \"\");\n}\n\nfunction extractTags(fm: Record<string, unknown>): string {\n const tags = fm[\"tags\"];\n if (!Array.isArray(tags)) return \"\";\n return tags.filter((t): t is string => typeof t === \"string\").join(\",\");\n}\n\nfunction extractWikiLinks(content: string): string[] {\n const links: string[] = [];\n let match: RegExpExecArray \| null;\n const re = new RegExp(WIKILINK_RE.source, \"g\");\n while ((match = re.exec(content)) !== null) {\n links.push(match[1]!.trim());\n }\n return links;\n}\n\nfunction countWords(text: string): number {\n const trimmed = text.trim();\n if (trimmed === \"\") return 0;\n return trimmed.split(/\\s+/).length;\n}\n\nexport async function parsePage(\n filePath: string,\n relativePath: string,\n rawContent?: string,\n): Promise<ParsedPage> {\n const raw = rawContent ?? (await readFile(filePath, \"utf8\"));\n const parsed = matter(raw);\n const fm = parsed.data as Record<string, unknown>;\n const content = parsed.content;\n\n const title = extractTitle(fm, content, relativePath);\n const tags = extractTags(fm);\n const outgoingLinks = extractWikiLinks(content);\n const wordCount = countWords(content);\n\n return {\n path: relativePath,\n title,\n content,\n tags,\n frontmatter: fm,\n outgoingLinks,\n wordCount,\n };\n}\n","import { createHash } from \"node:crypto\";\nimport { readFile, stat, readdir } from \"node:fs/promises\";\nimport { join, relative } from \"node:path\";\nimport Database from \"better-sqlite3\";\nimport type { Project } from \"./project.js\";\nimport { parsePage } from \"./markdown.js\";\nimport { openDb, closeDb } from \"./db.js\";\n\nexport interface IndexStats {\n indexed: number;\n skipped: number;\n deleted: number;\n errors: number;\n}\n\nasync function collectMdFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile() && e.name.endsWith(\".md\"))\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\nfunction sha256(content: string): string {\n return createHash(\"sha256\").update(content).digest(\"hex\");\n}\n\ninterface PageMetaRow {\n sha256: string;\n}\n\ninterface UpsertStmts {\n deletePages: Database.Statement;\n insertPage: Database.Statement;\n upsertMeta: Database.Statement;\n}\n\nfunction upsertParsedPage(\n stmts: UpsertStmts,\n project: Project,\n page: Awaited<ReturnType<typeof parsePage>>,\n hash: string,\n mtime: number,\n): void {\n stmts.deletePages.run(page.path);\n stmts.insertPage.run(\n page.path,\n page.title,\n page.content,\n page.tags,\n project.name,\n );\n stmts.upsertMeta.run(\n page.path,\n hash,\n mtime,\n page.wordCount,\n JSON.stringify(page.frontmatter),\n JSON.stringify(page.outgoingLinks),\n Date.now(),\n );\n}\n\nexport async function indexProject(\n project: Project,\n rebuild = false,\n): Promise<IndexStats> {\n const db = openDb(project);\n try {\n if (rebuild) {\n db.exec(\"DELETE FROM pages; DELETE FROM page_meta;\");\n }\n\n const files = await collectMdFiles(project.wikiDir);\n const stats: IndexStats = { indexed: 0, skipped: 0, deleted: 0, errors: 0 };\n\n const getMetaStmt = db.prepare<[string], PageMetaRow>(\n \"SELECT sha256 FROM page_meta WHERE path = ?\",\n );\n\n const upsertStmts: UpsertStmts = {\n deletePages: db.prepare(\"DELETE FROM pages WHERE path = ?\"),\n insertPage: db.prepare(\n \"INSERT INTO pages(path, title, content, tags, project) VALUES (?, ?, ?, ?, ?)\",\n ),\n upsertMeta: db.prepare(`\n INSERT INTO page_meta(path, sha256, mtime, word_count, frontmatter, outgoing_links, updated_at)\n VALUES (?, ?, ?, ?, ?, ?, ?)\n ON CONFLICT(path) DO UPDATE SET\n sha256 = excluded.sha256,\n mtime = excluded.mtime,\n word_count = excluded.word_count,\n frontmatter = excluded.frontmatter,\n outgoing_links = excluded.outgoing_links,\n updated_at = excluded.updated_at\n `),\n };\n\n const deleteStalePages = db.prepare(\"DELETE FROM pages WHERE path = ?\");\n const deleteStaleMeta = db.prepare(\"DELETE FROM page_meta WHERE path = ?\");\n const listMetaStmt = db.prepare<[], { path: string }>(\n \"SELECT path FROM page_meta\",\n );\n\n const processFile = db.transaction(\n (\n page: Awaited<ReturnType<typeof parsePage>>,\n hash: string,\n mtime: number,\n ) => {\n upsertParsedPage(upsertStmts, project, page, hash, mtime);\n },\n );\n\n const onDiskPaths = new Set<string>();\n\n for (const absPath of files) {\n const relPath = relative(project.root, absPath);\n onDiskPaths.add(relPath);\n\n let raw: string;\n try {\n raw = await readFile(absPath, \"utf8\");\n } catch (err) {\n stats.errors++;\n continue;\n }\n\n const hash = sha256(raw);\n const existing = getMetaStmt.get(relPath);\n\n if (existing && existing.sha256 === hash) {\n stats.skipped++;\n continue;\n }\n\n let fileStat: Awaited<ReturnType<typeof stat>>;\n try {\n fileStat = await stat(absPath);\n } catch {\n stats.errors++;\n continue;\n }\n\n let page: Awaited<ReturnType<typeof parsePage>>;\n try {\n page = await parsePage(absPath, relPath, raw);\n } catch {\n stats.errors++;\n continue;\n }\n\n try {\n processFile(page, hash, Math.floor(fileStat.mtimeMs));\n stats.indexed++;\n } catch {\n stats.errors++;\n }\n }\n\n // Remove entries for deleted files\n const allMetaPaths = listMetaStmt.all().map((r) => r.path);\n\n const stalePaths = allMetaPaths.filter((p) => !onDiskPaths.has(p));\n\n const deleteStale = db.transaction((paths: string[]) => {\n for (const p of paths) {\n deleteStalePages.run(p);\n deleteStaleMeta.run(p);\n }\n });\n\n deleteStale(stalePaths);\n stats.deleted += stalePaths.length;\n\n return stats;\n } finally {\n closeDb(db);\n }\n}\n","import Database from \"better-sqlite3\";\n\nexport interface SearchResult {\n rank: number;\n path: string;\n title: string;\n snippet: string;\n tags: string[];\n}\n\nexport interface SearchOptions {\n limit?: number;\n tags?: string[];\n}\n\ninterface FtsRow {\n path: string;\n title: string;\n tags: string;\n rank: number;\n snippet: string;\n}\n\nfunction sanitizeFtsQuery(query: string): string {\n // Split into tokens, quote each one to escape special FTS5 chars.\n // Using individual quoted tokens (AND logic) instead of a single phrase\n // so non-adjacent words still match.\n const tokens = query\n .trim()\n .split(/\\s+/)\n .filter((t) => t.length > 0);\n if (tokens.length === 0) return '\"\"';\n return tokens.map((t) => `\"${t.replace(/\"/g, '\"\"')}\"`).join(\" \");\n}\n\nfunction parseTags(raw: string): string[] {\n if (!raw \|\| raw.trim() === \"\") return [];\n return raw\n .split(\",\")\n .map((t) => t.trim())\n .filter((t) => t.length > 0);\n}\n\nexport function searchWiki(\n db: Database.Database,\n query: string,\n projectName: string,\n options?: SearchOptions,\n): SearchResult[] {\n if (!query \|\| query.trim() === \"\") {\n return [];\n }\n\n const limit = options?.limit ?? 10;\n const ftsQuery = sanitizeFtsQuery(query.trim());\n\n // Build dynamic tag WHERE clauses so filtering happens in SQL\n const filterTags = options?.tags?.length\n ? options.tags\n .map((t) => t.trim().toLowerCase())\n .filter((t) => t.length > 0)\n : [];\n\n const tagClauses = filterTags.map(() => \"AND lower(tags) LIKE ?\").join(\" \");\n const tagParams = filterTags.map((t) => `%${t}%`);\n\n const stmt = db.prepare<[string, string, ...string[], number], FtsRow>(`\n SELECT path, title, tags, bm25(pages) as rank,\n snippet(pages, 2, '', '', '...', 8) as snippet\n FROM pages\n WHERE pages MATCH ? AND project = ?\n ${tagClauses}\n ORDER BY rank\n LIMIT ?\n `);\n\n const rows = stmt.all(ftsQuery, projectName, ...tagParams, limit);\n\n const results: SearchResult[] = rows.map((row) => ({\n rank: row.rank,\n path: row.path,\n title: row.title,\n snippet: row.snippet,\n tags: parseTags(row.tags),\n }));\n\n return results;\n}\n","import { readFile } from \"node:fs/promises\";\nimport { basename, extname } from \"node:path\";\n\nexport type SourceType = \"markdown\" \| \"text\" \| \"pdf\" \| \"url\";\n\nexport interface SourceContent {\n type: SourceType;\n originalPath: string;\n content: string;\n filename: string;\n}\n\nfunction sanitizeFilename(name: string): string {\n return name.toLowerCase().replace(/\\s/g, \"-\");\n}\n\nfunction detectType(sourcePath: string): SourceType {\n if (sourcePath.startsWith(\"http://\") \|\| sourcePath.startsWith(\"https://\")) {\n return \"url\";\n }\n const ext = extname(sourcePath).toLowerCase();\n if (ext === \".pdf\") return \"pdf\";\n if (ext === \".md\") return \"markdown\";\n return \"text\";\n}\n\nfunction filenameFromUrl(url: string): string {\n try {\n const parsed = new URL(url);\n const parts = parsed.pathname.split(\"/\").filter(Boolean);\n const last = parts[parts.length - 1];\n const pagePart = last\n ? last.includes(\".\")\n ? last\n : `${last}.html`\n : \"index.html\";\n return sanitizeFilename(`${parsed.hostname}-${pagePart}`);\n } catch {\n return \"url-content.html\";\n }\n}\n\nfunction stripHtml(html: string): string {\n // Remove script and style blocks entirely\n let text = html.replace(/<script[\\s\\S]?<\\/script>/gi, \" \");\n text = text.replace(/<style[\\s\\S]?<\\/style>/gi, \" \");\n // Strip remaining tags\n text = text.replace(/<[^>]+>/g, \" \");\n // Decode common HTML entities\n text = text\n .replace(/&/gi, \"&\")\n .replace(/</gi, \"<\")\n .replace(/>/gi, \">\")\n .replace(/"/gi, '\"')\n .replace(/'/gi, \"'\")\n .replace(/ /gi, \" \");\n // Collapse whitespace\n text = text.replace(/\\s+/g, \" \").trim();\n return text;\n}\n\nasync function readPdf(filePath: string): Promise<string> {\n // Dynamic import to avoid issues if pdf-parse not available in test env\n const pdfParse = await import(\"pdf-parse\").then((m) => m.default ?? m);\n const buffer = await readFile(filePath);\n const data = await pdfParse(buffer);\n return data.text;\n}\n\nfunction isPrivateUrl(url: string): boolean {\n try {\n const { hostname } = new URL(url);\n return (\n hostname === \"localhost\" \|\|\n hostname === \"127.0.0.1\" \|\|\n hostname === \"::1\" \|\|\n hostname.startsWith(\"169.254.\") \|\| // link-local\n hostname.startsWith(\"10.\") \|\|\n hostname.startsWith(\"192.168.\") \|\|\n /^172\\.(1[6-9]\|2\\d\|3[01])\\./.test(hostname)\n );\n } catch {\n return false;\n }\n}\n\nasync function fetchUrl(url: string): Promise<string> {\n if (isPrivateUrl(url)) {\n throw new Error(`Fetching private/localhost URLs is not allowed: ${url}`);\n }\n const response = await fetch(url);\n if (!response.ok) {\n throw new Error(\n `Failed to fetch URL ${url}: HTTP ${response.status} ${response.statusText}`,\n );\n }\n const html = await response.text();\n return stripHtml(html);\n}\n\nexport async function readSource(sourcePath: string): Promise<SourceContent> {\n const type = detectType(sourcePath);\n\n if (type === \"url\") {\n const content = await fetchUrl(sourcePath);\n const filename = filenameFromUrl(sourcePath);\n return { type, originalPath: sourcePath, content, filename };\n }\n\n if (type === \"pdf\") {\n const content = await readPdf(sourcePath);\n const raw = basename(sourcePath);\n const filename = sanitizeFilename(raw);\n return { type, originalPath: sourcePath, content, filename };\n }\n\n // markdown or text\n const content = await readFile(sourcePath, \"utf8\");\n const raw = basename(sourcePath);\n const filename = sanitizeFilename(raw);\n return { type, originalPath: sourcePath, content, filename };\n}\n","import type { KbConfig } from \"./config.js\";\n\nexport interface LlmMessage {\n role: \"user\" \| \"assistant\";\n content: string;\n}\n\nexport interface LlmAdapter {\n complete(messages: LlmMessage[], systemPrompt: string): Promise<string>;\n}\n\nfunction createAnthropicAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const apiKey = process.env[\"ANTHROPIC_API_KEY\"];\n if (!apiKey) {\n throw new Error(\"ANTHROPIC_API_KEY environment variable is not set\");\n }\n const Anthropic = await import(\"@anthropic-ai/sdk\").then(\n (m) => m.default ?? m,\n );\n const client = new Anthropic({ apiKey });\n const response = await client.messages.create({\n model,\n max_tokens: 8192,\n system: systemPrompt,\n messages: messages.map((m) => ({\n role: m.role,\n content: m.content,\n })),\n });\n const block = response.content[0];\n if (!block \|\| block.type !== \"text\") {\n throw new Error(\"Anthropic returned no text content\");\n }\n return block.text;\n },\n };\n}\n\nfunction createOpenAiAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const apiKey = process.env[\"OPENAI_API_KEY\"];\n if (!apiKey) {\n throw new Error(\"OPENAI_API_KEY environment variable is not set\");\n }\n const body = {\n model,\n messages: [\n { role: \"system\", content: systemPrompt },\n ...messages.map((m) => ({ role: m.role, content: m.content })),\n ],\n };\n const response = await fetch(\n \"https://api.openai.com/v1/chat/completions\",\n {\n method: \"POST\",\n headers: {\n \"Content-Type\": \"application/json\",\n Authorization: `Bearer ${apiKey}`,\n },\n body: JSON.stringify(body),\n },\n );\n if (!response.ok) {\n const text = await response.text();\n throw new Error(`OpenAI API error: HTTP ${response.status} — ${text}`);\n }\n const data = (await response.json()) as {\n choices: Array<{ message: { content: string } }>;\n };\n const content = data.choices[0]?.message?.content;\n if (!content) {\n throw new Error(\"OpenAI returned no content\");\n }\n return content;\n },\n };\n}\n\nfunction createOllamaAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const baseUrl =\n process.env[\"OLLAMA_BASE_URL\"] ?? \"http://localhost:11434\";\n const body = {\n model,\n messages: [\n { role: \"system\", content: systemPrompt },\n ...messages.map((m) => ({ role: m.role, content: m.content })),\n ],\n stream: false,\n };\n const response = await fetch(`${baseUrl}/api/chat`, {\n method: \"POST\",\n headers: { \"Content-Type\": \"application/json\" },\n body: JSON.stringify(body),\n });\n if (!response.ok) {\n const text = await response.text();\n throw new Error(`Ollama API error: HTTP ${response.status} — ${text}`);\n }\n const data = (await response.json()) as {\n message?: { content: string };\n };\n const content = data.message?.content;\n if (!content) {\n throw new Error(\"Ollama returned no content\");\n }\n return content;\n },\n };\n}\n\nexport function createLlmAdapter(config: KbConfig): LlmAdapter {\n const { provider, model } = config.llm;\n switch (provider) {\n case \"anthropic\":\n return createAnthropicAdapter(model);\n case \"openai\":\n return createOpenAiAdapter(model);\n case \"ollama\":\n return createOllamaAdapter(model);\n default: {\n const _exhaustive: never = provider;\n throw new Error(`Unsupported LLM provider: ${String(_exhaustive)}`);\n }\n }\n}\n","import { readFile, writeFile, mkdir, appendFile } from \"node:fs/promises\";\nimport { join, dirname, resolve } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport type { LlmAdapter } from \"./llm.js\";\nimport type { IngestResult } from \"./ingest-types.js\";\nimport { readSource } from \"./source-reader.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport interface IngestOptions {\n apply?: boolean;\n batch?: boolean;\n}\n\nexport interface IngestPlan {\n result: IngestResult;\n sourceFile: string;\n dryRun: boolean;\n}\n\nconst SYSTEM_PROMPT = `You are an AI assistant maintaining a knowledge base wiki.\nYou will be given a new source document and the current state of the wiki.\nYour task is to integrate the new knowledge into the wiki.\n\nReturn ONLY a JSON object matching this exact schema (no markdown fences):\n{\n \"summary\": { \"path\": \"wiki/sources/<filename>-summary.md\", \"content\": \"...\" },\n \"updates\": [{ \"path\": \"...\", \"content\": \"...\", \"reason\": \"...\" }],\n \"newPages\": [{ \"path\": \"...\", \"content\": \"...\", \"reason\": \"...\" }],\n \"indexUpdate\": \"...\",\n \"logEntry\": \"...\"\n}`;\n\nfunction assertWithinRoot(absPath: string, root: string): void {\n const resolvedPath = resolve(absPath);\n const resolvedRoot = resolve(root) + \"/\";\n if (!resolvedPath.startsWith(resolvedRoot)) {\n throw new Error(\n `Unsafe path rejected: \"${absPath}\" is outside project root`,\n );\n }\n}\n\nasync function readFileSafe(filePath: string): Promise<string> {\n try {\n return await readFile(filePath, \"utf8\");\n } catch {\n return \"\";\n }\n}\n\nfunction parseIngestResult(raw: string): IngestResult {\n const cleaned = raw\n .replace(/^```(?:json)?\\s/i, \"\")\n .replace(/\\s```\\s$/i, \"\")\n .trim();\n let parsed: unknown;\n try {\n parsed = JSON.parse(cleaned);\n } catch (err) {\n throw new Error(\n `Invalid LLM response: could not parse JSON. Raw response: ${cleaned.slice(0, 200)}`,\n );\n }\n\n if (parsed === null \|\| typeof parsed !== \"object\" \|\| Array.isArray(parsed)) {\n throw new Error(\"Invalid LLM response: expected a JSON object\");\n }\n\n const obj = parsed as Record<string, unknown>;\n\n if (\n !obj[\"summary\"] \|\|\n typeof obj[\"summary\"] !== \"object\" \|\|\n Array.isArray(obj[\"summary\"])\n ) {\n throw new Error('Invalid LLM response: missing \"summary\" object');\n }\n\n const summary = obj[\"summary\"] as Record<string, unknown>;\n if (\n typeof summary[\"path\"] !== \"string\" \|\|\n typeof summary[\"content\"] !== \"string\"\n ) {\n throw new Error(\n 'Invalid LLM response: \"summary\" must have \"path\" and \"content\" strings',\n );\n }\n\n if (!Array.isArray(obj[\"updates\"])) {\n throw new Error('Invalid LLM response: \"updates\" must be an array');\n }\n\n if (!Array.isArray(obj[\"newPages\"])) {\n throw new Error('Invalid LLM response: \"newPages\" must be an array');\n }\n\n if (typeof obj[\"indexUpdate\"] !== \"string\") {\n throw new Error('Invalid LLM response: \"indexUpdate\" must be a string');\n }\n\n if (typeof obj[\"logEntry\"] !== \"string\") {\n throw new Error('Invalid LLM response: \"logEntry\" must be a string');\n }\n\n const updates = (obj[\"updates\"] as unknown[]).map((u, i) => {\n if (typeof u !== \"object\" \|\| u === null \|\| Array.isArray(u)) {\n throw new Error(`Invalid LLM response: updates[${i}] must be an object`);\n }\n const update = u as Record<string, unknown>;\n if (\n typeof update[\"path\"] !== \"string\" \|\|\n typeof update[\"content\"] !== \"string\" \|\|\n typeof update[\"reason\"] !== \"string\"\n ) {\n throw new Error(\n `Invalid LLM response: updates[${i}] must have path, content, and reason strings`,\n );\n }\n return {\n path: update[\"path\"],\n content: update[\"content\"],\n reason: update[\"reason\"],\n };\n });\n\n const newPages = (obj[\"newPages\"] as unknown[]).map((p, i) => {\n if (typeof p !== \"object\" \|\| p === null \|\| Array.isArray(p)) {\n throw new Error(`Invalid LLM response: newPages[${i}] must be an object`);\n }\n const page = p as Record<string, unknown>;\n if (\n typeof page[\"path\"] !== \"string\" \|\|\n typeof page[\"content\"] !== \"string\" \|\|\n typeof page[\"reason\"] !== \"string\"\n ) {\n throw new Error(\n `Invalid LLM response: newPages[${i}] must have path, content, and reason strings`,\n );\n }\n return {\n path: page[\"path\"],\n content: page[\"content\"],\n reason: page[\"reason\"],\n };\n });\n\n return {\n summary: { path: summary[\"path\"], content: summary[\"content\"] },\n updates,\n newPages,\n indexUpdate: obj[\"indexUpdate\"] as string,\n logEntry: obj[\"logEntry\"] as string,\n };\n}\n\nasync function applyIngestResult(\n project: Project,\n result: IngestResult,\n sourceContent: string,\n sourceFilename: string,\n): Promise<void> {\n // Write summary\n const summaryAbsPath = join(project.root, result.summary.path);\n assertWithinRoot(summaryAbsPath, project.root);\n await mkdir(dirname(summaryAbsPath), { recursive: true });\n await writeFile(summaryAbsPath, result.summary.content, \"utf8\");\n\n // Write updated pages\n for (const update of result.updates) {\n const absPath = join(project.root, update.path);\n assertWithinRoot(absPath, project.root);\n await mkdir(dirname(absPath), { recursive: true });\n await writeFile(absPath, update.content, \"utf8\");\n }\n\n // Write new pages\n for (const newPage of result.newPages) {\n const absPath = join(project.root, newPage.path);\n assertWithinRoot(absPath, project.root);\n await mkdir(dirname(absPath), { recursive: true });\n await writeFile(absPath, newPage.content, \"utf8\");\n }\n\n // Update _index.md\n const indexPath = join(project.wikiDir, \"_index.md\");\n await writeFile(indexPath, result.indexUpdate, \"utf8\");\n\n // Write source file to sources directory\n const sourceDestPath = join(project.sourcesDir, sourceFilename);\n await mkdir(project.sourcesDir, { recursive: true });\n await writeFile(sourceDestPath, sourceContent, \"utf8\");\n\n // Append to log.md\n const logPath = join(project.wikiDir, \"log.md\");\n const timestamp = new Date().toISOString().split(\"T\")[0];\n const logLine = `- ${timestamp}: ${result.logEntry}\\n`;\n await appendFile(logPath, logLine, \"utf8\");\n\n // Re-index\n await indexProject(project);\n}\n\nexport async function ingestSource(\n project: Project,\n sourcePath: string,\n llm: LlmAdapter,\n options?: IngestOptions,\n): Promise<IngestPlan> {\n const apply = options?.apply ?? false;\n\n // 1. Read source content\n const sourceContent = await readSource(sourcePath);\n\n // 2. Read current wiki index\n const indexPath = join(project.wikiDir, \"_index.md\");\n const currentIndex = await readFileSafe(indexPath);\n\n // 3. Read schema\n const schemaPath = join(project.kbDir, \"schema.md\");\n const schema = await readFileSafe(schemaPath);\n\n // 4. Build user message\n const userMessage = `## Wiki Schema\n${schema}\n\n## Current Wiki Index\n${currentIndex}\n\n## New Source: ${sourceContent.filename}\n${sourceContent.content}\n\nIntegrate this source into the wiki following the schema above.`;\n\n // 5. Call LLM\n const raw = await llm.complete(\n [{ role: \"user\", content: userMessage }],\n SYSTEM_PROMPT,\n );\n\n // 6. Parse response\n const result = parseIngestResult(raw);\n\n // 7. Apply if requested\n if (apply) {\n await applyIngestResult(\n project,\n result,\n sourceContent.content,\n sourceContent.filename,\n );\n }\n\n const sourceFile = join(project.sourcesDir, sourceContent.filename);\n\n return {\n result,\n sourceFile,\n dryRun: !apply,\n };\n}\n","import { readFile, writeFile, mkdir, appendFile } from \"node:fs/promises\";\nimport { existsSync } from \"node:fs\";\nimport { join, dirname, resolve } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport type { LlmAdapter } from \"./llm.js\";\nimport { openDb, closeDb } from \"./db.js\";\nimport { searchWiki } from \"./search.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport interface QueryResult {\n answer: string;\n sources: string[];\n}\n\nexport interface QueryOptions {\n save?: string;\n}\n\nconst SYSTEM_PROMPT = `You are a knowledgeable assistant answering questions about a project's knowledge base.\nAnswer concisely using only information from the provided wiki pages.\nUse [[page-name]] wikilink syntax to cite specific wiki pages in your answer.\nFormat your answer in markdown.`;\n\nfunction assertWithinRoot(absPath: string, root: string): void {\n const resolvedPath = resolve(absPath);\n const resolvedRoot = resolve(root) + \"/\";\n if (!resolvedPath.startsWith(resolvedRoot)) {\n throw new Error(\n `Unsafe path rejected: \"${absPath}\" is outside project root`,\n );\n }\n}\n\nasync function readFileSafe(filePath: string): Promise<string> {\n try {\n return await readFile(filePath, \"utf8\");\n } catch {\n return \"\";\n }\n}\n\nexport async function queryWiki(\n project: Project,\n question: string,\n llm: LlmAdapter,\n options?: QueryOptions,\n): Promise<QueryResult> {\n // 1. Auto-index if db doesn't exist\n const dbPath = join(project.kbDir, \"index.db\");\n if (!existsSync(dbPath)) {\n await indexProject(project);\n }\n\n // 2. Search for top relevant pages\n const db = openDb(project);\n let searchResults;\n try {\n searchResults = searchWiki(db, question, project.name, { limit: 10 });\n } finally {\n closeDb(db);\n }\n\n // 3. Read full content of each result page\n const pages: Array<{ path: string; title: string; content: string }> = [];\n for (const result of searchResults) {\n const absPath = join(project.root, result.path);\n const content = await readFileSafe(absPath);\n if (content) {\n pages.push({ path: result.path, title: result.title, content });\n }\n }\n\n // 4. Build user message\n const pagesSection =\n pages.length > 0\n ? pages\n .map((p) => `### ${p.title} (${p.path})\\n${p.content}`)\n .join(\"\\n\\n\")\n : \"(No wiki pages found for this query.)\";\n\n const userMessage = `## Question\\n${question}\\n\\n## Relevant Wiki Pages\\n\\n${pagesSection}`;\n\n // 5. Call LLM\n const answer = await llm.complete(\n [{ role: \"user\", content: userMessage }],\n SYSTEM_PROMPT,\n );\n\n const sources = pages.map((p) => p.path);\n\n // 6. If save option provided, write answer as wiki page and append to log\n if (options?.save) {\n const saveRelPath = options.save;\n const saveAbsPath = join(project.root, saveRelPath);\n assertWithinRoot(saveAbsPath, project.root);\n\n await mkdir(dirname(saveAbsPath), { recursive: true });\n await writeFile(saveAbsPath, answer, \"utf8\");\n\n // Append to log.md\n const logPath = join(project.wikiDir, \"log.md\");\n const timestamp = new Date().toISOString().split(\"T\")[0];\n const logEntry = `\\n## ${timestamp} — Queried: ${question}\\n\\nSaved to: ${saveRelPath}\\n`;\n await appendFile(logPath, logEntry, \"utf8\");\n\n // Re-index so saved page is searchable\n await indexProject(project);\n }\n\n return { answer, sources };\n}\n","import { readdir, stat } from \"node:fs/promises\";\nimport { join, relative, basename, extname } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport { openDb, closeDb } from \"./db.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport type LintSeverity = \"warning\" \| \"info\";\n\nexport interface LintIssue {\n severity: LintSeverity;\n code: string;\n path: string;\n message: string;\n detail?: string;\n}\n\nexport interface LintResult {\n issues: LintIssue[];\n pagesChecked: number;\n sourcesChecked: number;\n}\n\ninterface PageMetaRow {\n path: string;\n outgoing_links: string;\n word_count: number;\n mtime: number;\n updated_at: number;\n}\n\nasync function collectMdFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile() && e.name.endsWith(\".md\"))\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\nasync function collectSourceFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile())\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\n/\n Build a set of \"keys\" for wiki pages for wikilink resolution.\n * A wikilink [[foo-bar]] can match:\n * - a page whose filename (without extension) is \"foo-bar\"\n * - a page whose relative path is \"foo-bar\" or \"foo-bar.md\"\n /\nfunction buildPageKeySet(\n relPaths: string[],\n projectRoot: string,\n wikiDir: string,\n): Set<string> {\n const keys = new Set<string>();\n for (const rp of relPaths) {\n // rp is relative to projectRoot, e.g. \"wiki/concepts/foo.md\"\n keys.add(rp);\n // without extension\n keys.add(rp.replace(/\\.md$/i, \"\"));\n // filename without extension\n const fname = basename(rp, \".md\");\n keys.add(fname);\n // relative path from wikiDir\n const absPath = join(projectRoot, rp);\n const relToWiki = relative(wikiDir, absPath);\n keys.add(relToWiki);\n keys.add(relToWiki.replace(/\\.md$/i, \"\"));\n }\n return keys;\n}\n\nexport async function lintProject(project: Project): Promise<LintResult> {\n // Ensure index is up to date\n await indexProject(project);\n\n const issues: LintIssue[] = [];\n\n // Collect all wiki md files\n const absWikiFiles = await collectMdFiles(project.wikiDir);\n const relWikiPaths = absWikiFiles.map((f) => relative(project.root, f));\n\n const pagesChecked = relWikiPaths.length;\n\n // Always collect source files so sourcesChecked is accurate\n const sourceFiles = await collectSourceFiles(project.sourcesDir);\n const sourcesChecked = sourceFiles.filter(\n (f) => basename(f) !== \".gitkeep\",\n ).length;\n\n if (pagesChecked === 0) {\n return { issues, pagesChecked: 0, sourcesChecked };\n }\n\n // Build page key set for wikilink resolution\n const pageKeySet = buildPageKeySet(\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n\n // Query all page_meta rows\n const db = openDb(project);\n let rows: PageMetaRow[];\n try {\n rows = db\n .prepare<\n [],\n PageMetaRow\n >(\"SELECT path, outgoing_links, word_count, mtime, updated_at FROM page_meta\")\n .all();\n } finally {\n closeDb(db);\n }\n\n // Build a map from path -> row for quick lookup\n const metaMap = new Map<string, PageMetaRow>();\n for (const row of rows) {\n metaMap.set(row.path, row);\n }\n\n // Build inbound link map\n const inboundLinks = new Map<string, Set<string>>();\n for (const rp of relWikiPaths) {\n inboundLinks.set(rp, new Set());\n }\n\n for (const row of rows) {\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n // Find which page this link resolves to\n const resolved = resolveLink(\n link,\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n if (resolved !== null) {\n const set = inboundLinks.get(resolved);\n if (set) {\n set.add(row.path);\n }\n }\n }\n }\n\n // Read _index.md outgoing links for MISSING_INDEX check\n const indexPath = relWikiPaths.find((p) => basename(p) === \"_index.md\");\n let indexLinks: Set<string> = new Set();\n if (indexPath) {\n const indexRow = metaMap.get(indexPath);\n if (indexRow) {\n let links: string[] = [];\n try {\n links = JSON.parse(indexRow.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n const resolved = resolveLink(\n link,\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n if (resolved !== null) {\n indexLinks.add(resolved);\n }\n }\n }\n }\n\n // --- CHECK 1: ORPHAN_PAGE ---\n for (const rp of relWikiPaths) {\n if (basename(rp) === \"_index.md\") continue;\n const inbound = inboundLinks.get(rp);\n if (!inbound \|\| inbound.size === 0) {\n issues.push({\n severity: \"warning\",\n code: \"ORPHAN_PAGE\",\n path: rp,\n message: \"Orphan page (no inbound links)\",\n });\n }\n }\n\n // --- CHECK 2: BROKEN_LINK ---\n for (const row of rows) {\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n if (!isLinkResolvable(link, pageKeySet)) {\n issues.push({\n severity: \"warning\",\n code: \"BROKEN_LINK\",\n path: row.path,\n message: `Broken wikilink [[${link}]] not found`,\n detail: link,\n });\n }\n }\n }\n\n // --- CHECK 3: STUB_PAGE ---\n for (const row of rows) {\n if (basename(row.path) === \"_index.md\") continue;\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n if (links.length === 0 && row.word_count < 50) {\n issues.push({\n severity: \"info\",\n code: \"STUB_PAGE\",\n path: row.path,\n message: `Stub page (no links, < 50 words)`,\n });\n }\n }\n\n // --- CHECK 4: STALE_SUMMARY ---\n // wiki/sources/foo-summary.md <-> sources/foo.\n const wikiSourcesDir = join(project.wikiDir, \"sources\");\n\n for (const rp of relWikiPaths) {\n // Check if the path is under wiki/sources/\n const absWikiPage = join(project.root, rp);\n const relToWikiSources = relative(wikiSourcesDir, absWikiPage);\n\n // Skip if not under wiki/sources/ (would start with \"..\")\n if (relToWikiSources.startsWith(\"..\")) continue;\n\n // Convention: wiki/sources/foo-summary.md <-> sources/foo.\n const summaryBasename = basename(rp, \".md\");\n // Strip -summary suffix\n const sourceBasename = summaryBasename.endsWith(\"-summary\")\n ? summaryBasename.slice(0, -\"-summary\".length)\n : summaryBasename;\n\n // Find matching source file\n const matchingSource = sourceFiles.find((sf) => {\n const sfBase = basename(sf, extname(sf));\n return sfBase === sourceBasename;\n });\n\n if (!matchingSource) continue;\n\n try {\n const summaryRow = metaMap.get(rp);\n if (!summaryRow) continue;\n\n const [sourceStat, summaryStat] = await Promise.all([\n stat(matchingSource),\n stat(join(project.root, summaryRow.path)),\n ]);\n\n if (sourceStat.mtimeMs > summaryStat.mtimeMs) {\n issues.push({\n severity: \"warning\",\n code: \"STALE_SUMMARY\",\n path: rp,\n message: \"Source updated after summary\",\n detail: relative(project.root, matchingSource),\n });\n }\n } catch {\n // Ignore stat errors\n }\n }\n\n // --- CHECK 5: MISSING_INDEX ---\n for (const rp of relWikiPaths) {\n if (basename(rp) === \"_index.md\") continue;\n if (!indexPath) {\n // No _index.md exists — skip this check\n continue;\n }\n if (!indexLinks.has(rp)) {\n // Check by filename too\n const fname = basename(rp, \".md\");\n if (!indexLinks.has(fname)) {\n issues.push({\n severity: \"info\",\n code: \"MISSING_INDEX\",\n path: rp,\n message: \"Not in _index.md\",\n });\n }\n }\n }\n\n return { issues, pagesChecked, sourcesChecked };\n}\n\nfunction resolveLink(\n link: string,\n relPaths: string[],\n projectRoot: string,\n wikiDir: string,\n): string \| null {\n for (const rp of relPaths) {\n const fname = basename(rp, \".md\");\n if (fname === link) return rp;\n if (rp === link \|\| rp === `${link}.md`) return rp;\n // relative to wikiDir\n const absPath = join(projectRoot, rp);\n 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1	+ {"version":3,"sources":["../src/index.ts","../src/init.ts","../src/config.ts","../src/project.ts","../src/db.ts","../src/markdown.ts","../src/indexer.ts","../src/search.ts","../src/source-reader.ts","../src/llm.ts","../src/ingest.ts","../src/query.ts","../src/lint.ts","../src/log-parser.ts"],"sourcesContent":["// Core package — business logic\n\nexport const VERSION = \"0.1.0\";\n\nexport { initProject } from \"./init.js\";\nexport type { InitOptions } from \"./init.js\";\n\nexport { parseConfig } from \"./config.js\";\nexport type { KbConfig } from \"./config.js\";\n\nexport { loadProject, tryLoadProject } from \"./project.js\";\nexport type { Project } from \"./project.js\";\n\nexport { openDb, closeDb } from \"./db.js\";\n\nexport { parsePage } from \"./markdown.js\";\nexport type { ParsedPage } from \"./markdown.js\";\n\nexport { indexProject } from \"./indexer.js\";\nexport type { IndexStats } from \"./indexer.js\";\n\nexport { searchWiki } from \"./search.js\";\nexport type { SearchResult, SearchOptions } from \"./search.js\";\n\nexport { readSource } from \"./source-reader.js\";\nexport type { SourceContent, SourceType } from \"./source-reader.js\";\n\nexport { createLlmAdapter } from \"./llm.js\";\nexport type { LlmAdapter, LlmMessage } from \"./llm.js\";\n\nexport type { IngestResult } from \"./ingest-types.js\";\n\nexport { ingestSource } from \"./ingest.js\";\nexport type { IngestOptions, IngestPlan } from \"./ingest.js\";\n\nexport { queryWiki } from \"./query.js\";\nexport type { QueryResult, QueryOptions } from \"./query.js\";\n\nexport { lintProject } from \"./lint.js\";\nexport type { LintIssue, LintResult, LintSeverity } from \"./lint.js\";\n\nexport { parseLogEntries } from \"./log-parser.js\";\nexport type { ParsedLogEntry } from \"./log-parser.js\";\n","import { mkdir, writeFile, access, rm } from \"node:fs/promises\";\nimport { join, basename } from \"node:path\";\nimport TOML from \"@iarna/toml\";\n\nexport interface InitOptions {\n name: string;\n directory: string; // absolute path where to init\n}\n\nfunction resolveProjectName(options: InitOptions): string {\n return options.name \|\| basename(options.directory);\n}\n\nfunction buildConfigToml(projectName: string): string {\n const config = {\n project: {\n name: projectName,\n version: \"0.1.0\",\n },\n directories: {\n sources: \"sources\",\n wiki: \"wiki\",\n },\n llm: {\n provider: \"anthropic\",\n model: \"claude-sonnet-4-20250514\",\n },\n };\n\n const tomlStr = TOML.stringify(config as TOML.JsonMap);\n return (\n tomlStr +\n '\\n[dependencies]\\n# shared-glossary = { path = \"../shared-glossary\" }\\n'\n );\n}\n\nfunction buildSchemaMd(): string {\n return `# KB Schema — LLM Instructions\n\nThis file defines the conventions for this knowledge base. The \\`kb\\` CLI and any\nLLM operating on this wiki MUST follow these rules.\n\n---\n\n## Wiki Structure Conventions\n\n- All pages live under the \\`wiki/\\` directory.\n- \\`wiki/_index.md\\` is the wiki root and serves as a table of contents.\n- Sub-topics may be organised into sub-directories: \\`wiki/<topic>/_index.md\\`.\n- File names use kebab-case, e.g. \\`wiki/authentication-flow.md\\`.\n- Every page must have a valid YAML frontmatter block.\n\n---\n\n## Frontmatter Schema\n\nEvery wiki page must begin with a YAML frontmatter block:\n\n\\`\\`\\`yaml\n---\ntitle: <Human-readable page title>\ntags: [tag1, tag2] # optional; array of lowercase strings\ncreated: <ISO 8601 date> # e.g. 2026-04-05\nupdated: <ISO 8601 date> # updated whenever content changes\nsource: <path or URL> # optional; original source material\n---\n\\`\\`\\`\n\nRequired fields: \\`title\\`, \\`created\\`.\n\n---\n\n## Page Templates\n\n### Entity Page\nUse for: people, systems, services, tools.\n\n\\`\\`\\`markdown\n---\ntitle: <Entity Name>\ntags: [entity]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# <Entity Name>\n\nType: <system \| person \| service \| tool>\n\n## Overview\n\n<One-paragraph description.>\n\n## Key Attributes\n\n- Attribute: value\n\n## Related\n\n- [[related-page]]\n\\`\\`\\`\n\n### Concept Page\nUse for: ideas, patterns, terminology.\n\n\\`\\`\\`markdown\n---\ntitle: <Concept Name>\ntags: [concept]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# <Concept Name>\n\n## Definition\n\n<Clear definition in 1-3 sentences.>\n\n## Context\n\n<When and why this concept matters in the project.>\n\n## See Also\n\n- [[related-concept]]\n\\`\\`\\`\n\n### Source Summary Page\nUse for: summarised source material (docs, papers, meetings).\n\n\\`\\`\\`markdown\n---\ntitle: Summary — <Source Title>\ntags: [source-summary]\ncreated: <ISO date>\nsource: <path or URL>\n---\n\n# Summary — <Source Title>\n\n## Key Points\n\n- Point one\n- Point two\n\n## Decisions / Implications\n\n<What this source means for the project.>\n\n## Raw Source\n\nSee \\`sources/<filename>\\`.\n\\`\\`\\`\n\n### Comparison Page\nUse for: side-by-side evaluation of options.\n\n\\`\\`\\`markdown\n---\ntitle: Comparison — <Topic>\ntags: [comparison]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# Comparison — <Topic>\n\n\| Criterion \| Option A \| Option B \|\n\|-----------\|----------\|----------\|\n\| ... \| ... \| ... \|\n\n## Recommendation\n\n<Which option and why.>\n\\`\\`\\`\n\n---\n\n## Wikilink Conventions\n\n- Basic link: \\`[[page-name]]\\` — links to \\`wiki/page-name.md\\`.\n- Display text: \\`[[page-name\|display text]]\\` — renders as \"display text\".\n- Cross-directory: \\`[[topic/sub-page]]\\`.\n- All wikilink targets must be lowercase kebab-case matching the file name without \\`.md\\`.\n\n---\n\n## Ingest Workflow\n\n1. Place the source file in \\`sources/\\` (PDF, Markdown, plain text, etc.).\n2. Run \\`kb ingest sources/<filename>\\`.\n3. The CLI reads the file, calls the configured LLM, and generates a source-summary\n page in \\`wiki/\\`.\n4. The summary page is linked from \\`wiki/_index.md\\` under Sources.\n5. An entry is appended to \\`log.md\\`.\n\n---\n\n## Query Workflow\n\n1. Run \\`kb query \"<natural-language question>\"\\`.\n2. The CLI searches the wiki index for relevant pages.\n3. Relevant page content is assembled into a prompt context.\n4. The LLM answers the question, citing wikilinks.\n5. The answer is printed to stdout. Nothing is written to disk unless \\`--save\\` is passed.\n\n---\n\n## Lint Workflow\n\nRun \\`kb lint\\` to check for:\n\n- Pages missing required frontmatter fields (\\`title\\`, \\`created\\`).\n- Broken wikilinks (targets that don't resolve to an existing page).\n- Pages not reachable from \\`wiki/_index.md\\`.\n- Duplicate page titles across the wiki.\n- Frontmatter fields with invalid types or formats.\n\nLint exits with code 0 on success, 1 if errors are found.\n`;\n}\n\nfunction buildIndexMd(projectName: string, isoDate: string): string {\n return `---\ntitle: ${projectName} Knowledge Base\ncreated: ${isoDate}\n---\n\n# ${projectName} Knowledge Base\n\n> This wiki is maintained by the \\`kb\\` CLI tool.\n\n## Pages\n\n(No pages yet. Use \\`kb ingest <source>\\` to add content.)\n\n## Sources\n\n(No sources yet.)\n`;\n}\n\nfunction buildLogMd(projectName: string, isoDate: string): string {\n return `# Activity Log\n\n## ${isoDate} — Project initialized\n\nProject \\`${projectName}\\` initialized.\n`;\n}\n\nasync function kbDirExists(directory: string): Promise<boolean> {\n try {\n await access(join(directory, \".kb\"));\n return true;\n } catch {\n return false;\n }\n}\n\nexport async function initProject(options: InitOptions): Promise<void> {\n const projectName = resolveProjectName(options);\n const { directory } = options;\n\n if (await kbDirExists(directory)) {\n throw new Error(\n `Knowledge base already initialized: .kb/ already exists in ${directory}`,\n );\n }\n\n const isoDate = new Date().toISOString().split(\"T\")[0]!;\n\n try {\n await Promise.all([\n mkdir(join(directory, \".kb\"), { recursive: true }),\n mkdir(join(directory, \"sources\"), { recursive: true }),\n mkdir(join(directory, \"wiki\"), { recursive: true }),\n ]);\n\n await Promise.all([\n writeFile(\n join(directory, \".kb\", \"config.toml\"),\n buildConfigToml(projectName),\n \"utf8\",\n ),\n writeFile(join(directory, \".kb\", \"schema.md\"), buildSchemaMd(), \"utf8\"),\n writeFile(join(directory, \"sources\", \".gitkeep\"), \"\", \"utf8\"),\n writeFile(\n join(directory, \"wiki\", \"_index.md\"),\n buildIndexMd(projectName, isoDate),\n \"utf8\",\n ),\n writeFile(\n join(directory, \"log.md\"),\n buildLogMd(projectName, isoDate),\n \"utf8\",\n ),\n ]);\n } catch (error) {\n // Rollback: remove .kb/ if it was created\n await rm(join(directory, \".kb\"), { recursive: true, force: true });\n throw error;\n }\n}\n","import { readFile } from \"node:fs/promises\";\nimport TOML from \"@iarna/toml\";\n\nexport interface KbConfig {\n project: {\n name: string;\n version: string;\n };\n directories: {\n sources: string;\n wiki: string;\n };\n llm: {\n provider: \"anthropic\" \| \"openai\" \| \"ollama\";\n model: string;\n };\n dependencies: Record<\n string,\n { path?: string; git?: string; branch?: string; mode?: string }\n >;\n}\n\nconst VALID_PROVIDERS = [\"anthropic\", \"openai\", \"ollama\"] as const;\n\nfunction requireSafeRelativePath(val: string, field: string): void {\n if (val.startsWith(\"/\") \|\| val.split(\"/\").includes(\"..\")) {\n throw new Error(\n `Invalid config: ${field} must be a safe relative path, got \"${val}\"`,\n );\n }\n}\n\nfunction requireString(\n obj: Record<string, unknown>,\n key: string,\n context: string,\n): string {\n const val = obj[key];\n if (typeof val !== \"string\" \|\| val.trim() === \"\") {\n throw new Error(\n `Invalid config: missing required field \"${context}.${key}\"`,\n );\n }\n return val;\n}\n\nfunction requireSection(\n obj: Record<string, unknown>,\n key: string,\n): Record<string, unknown> {\n const val = obj[key];\n if (\n val === undefined \|\|\n val === null \|\|\n typeof val !== \"object\" \|\|\n Array.isArray(val)\n ) {\n throw new Error(`Invalid config: missing required section \"[${key}]\"`);\n }\n return val as Record<string, unknown>;\n}\n\nexport async function parseConfig(configPath: string): Promise<KbConfig> {\n let raw: string;\n try {\n raw = await readFile(configPath, \"utf8\");\n } catch (err: unknown) {\n const message = err instanceof Error ? err.message : String(err);\n throw new Error(`Config file not found: ${configPath}\\n${message}`);\n }\n\n let parsed: Record<string, unknown>;\n try {\n parsed = TOML.parse(raw) as Record<string, unknown>;\n } catch (err: unknown) {\n const message = err instanceof Error ? err.message : String(err);\n throw new Error(`Invalid TOML in config file ${configPath}: ${message}`);\n }\n\n const project = requireSection(parsed, \"project\");\n const name = requireString(project, \"name\", \"project\");\n const version = requireString(project, \"version\", \"project\");\n\n const directories = requireSection(parsed, \"directories\");\n const sources = requireString(directories, \"sources\", \"directories\");\n requireSafeRelativePath(sources, \"directories.sources\");\n const wiki = requireString(directories, \"wiki\", \"directories\");\n requireSafeRelativePath(wiki, \"directories.wiki\");\n\n const llm = requireSection(parsed, \"llm\");\n const providerRaw = requireString(llm, \"provider\", \"llm\");\n if (!(VALID_PROVIDERS as readonly string[]).includes(providerRaw)) {\n throw new Error(\n `Invalid config: llm.provider must be one of ${VALID_PROVIDERS.join(\", \")}, got \"${providerRaw}\"`,\n );\n }\n const provider = providerRaw as KbConfig[\"llm\"][\"provider\"];\n const model = requireString(llm, \"model\", \"llm\");\n\n const rawDeps = parsed[\"dependencies\"];\n const dependencies: KbConfig[\"dependencies\"] = {};\n if (\n rawDeps !== undefined &&\n rawDeps !== null &&\n typeof rawDeps === \"object\" &&\n !Array.isArray(rawDeps)\n ) {\n for (const [depKey, depVal] of Object.entries(\n rawDeps as Record<string, unknown>,\n )) {\n if (\n typeof depVal === \"object\" &&\n depVal !== null &&\n !Array.isArray(depVal)\n ) {\n const dep = depVal as Record<string, unknown>;\n dependencies[depKey] = {\n ...(typeof dep[\"path\"] === \"string\" ? { path: dep[\"path\"] } : {}),\n ...(typeof dep[\"git\"] === \"string\" ? { git: dep[\"git\"] } : {}),\n ...(typeof dep[\"branch\"] === \"string\"\n ? { branch: dep[\"branch\"] }\n : {}),\n ...(typeof dep[\"mode\"] === \"string\" ? { mode: dep[\"mode\"] } : {}),\n };\n }\n }\n }\n\n return {\n project: { name, version },\n directories: { sources, wiki },\n llm: { provider, model },\n dependencies,\n };\n}\n","import { access } from \"node:fs/promises\";\nimport { join, dirname, resolve } from \"node:path\";\nimport { parseConfig, type KbConfig } from \"./config.js\";\n\nexport interface Project {\n name: string;\n root: string;\n kbDir: string;\n sourcesDir: string;\n wikiDir: string;\n config: KbConfig;\n}\n\nasync function hasKbDir(dir: string): Promise<boolean> {\n try {\n await access(join(dir, \".kb\", \"config.toml\"));\n return true;\n } catch {\n return false;\n }\n}\n\nasync function findProjectRoot(startDir: string): Promise<string \| null> {\n let current = resolve(startDir);\n\n while (true) {\n if (await hasKbDir(current)) {\n return current;\n }\n const parent = dirname(current);\n if (parent === current) {\n // Reached filesystem root\n return null;\n }\n current = parent;\n }\n}\n\nexport async function loadProject(startDir: string): Promise<Project> {\n const root = await findProjectRoot(startDir);\n if (root === null) {\n throw new Error(\n `No kb project found. Run \"kb init\" to initialize a knowledge base in the current directory.`,\n );\n }\n\n const kbDir = join(root, \".kb\");\n const configPath = join(kbDir, \"config.toml\");\n const config = await parseConfig(configPath);\n\n return {\n name: config.project.name,\n root,\n kbDir,\n sourcesDir: join(root, config.directories.sources),\n wikiDir: join(root, config.directories.wiki),\n config,\n };\n}\n\nexport async function tryLoadProject(\n startDir: string,\n): Promise<Project \| null> {\n try {\n return await loadProject(startDir);\n } catch (err: unknown) {\n if (err instanceof Error && /no kb project found/i.test(err.message)) {\n return null;\n }\n throw err;\n }\n}\n","import Database from \"better-sqlite3\";\nimport { join } from \"node:path\";\nimport type { Project } from \"./project.js\";\n\nconst SCHEMA_SQL = `\nCREATE VIRTUAL TABLE IF NOT EXISTS pages USING fts5(\n path,\n title,\n content,\n tags,\n project,\n tokenize='porter unicode61'\n);\n\nCREATE TABLE IF NOT EXISTS page_meta (\n path TEXT PRIMARY KEY,\n sha256 TEXT NOT NULL,\n mtime INTEGER NOT NULL,\n word_count INTEGER NOT NULL DEFAULT 0,\n frontmatter TEXT NOT NULL DEFAULT '{}',\n outgoing_links TEXT NOT NULL DEFAULT '[]',\n updated_at INTEGER NOT NULL\n);\n`;\n\nexport function openDb(project: Project): Database.Database {\n const dbPath = join(project.kbDir, \"index.db\");\n const db = new Database(dbPath);\n db.pragma(\"journal_mode = WAL\");\n db.exec(SCHEMA_SQL);\n return db;\n}\n\nexport function closeDb(db: Database.Database): void {\n db.close();\n}\n","import { readFile } from \"node:fs/promises\";\nimport matter from \"gray-matter\";\n\nexport interface ParsedPage {\n path: string;\n title: string;\n content: string;\n tags: string;\n frontmatter: Record<string, unknown>;\n outgoingLinks: string[];\n wordCount: number;\n}\n\nconst WIKILINK_RE = /\\[\\[([^\\]\|]+)(?:\\\|[^\\]]+)?\\]\\]/g;\nconst H1_RE = /^#\\s+(.+)$/m;\n\nfunction extractTitle(\n fm: Record<string, unknown>,\n content: string,\n relativePath: string,\n): string {\n if (typeof fm[\"title\"] === \"string\" && fm[\"title\"].trim() !== \"\") {\n return fm[\"title\"].trim();\n }\n const h1Match = H1_RE.exec(content);\n if (h1Match) {\n return h1Match[1]!.trim();\n }\n // Fallback: use filename without extension\n const filename = relativePath.split(\"/\").pop() ?? relativePath;\n return filename.replace(/\\.md$/i, \"\");\n}\n\nfunction extractTags(fm: Record<string, unknown>): string {\n const tags = fm[\"tags\"];\n if (!Array.isArray(tags)) return \"\";\n return tags.filter((t): t is string => typeof t === \"string\").join(\",\");\n}\n\nfunction extractWikiLinks(content: string): string[] {\n const links: string[] = [];\n let match: RegExpExecArray \| null;\n const re = new RegExp(WIKILINK_RE.source, \"g\");\n while ((match = re.exec(content)) !== null) {\n links.push(match[1]!.trim());\n }\n return links;\n}\n\nfunction countWords(text: string): number {\n const trimmed = text.trim();\n if (trimmed === \"\") return 0;\n return trimmed.split(/\\s+/).length;\n}\n\nexport async function parsePage(\n filePath: string,\n relativePath: string,\n rawContent?: string,\n): Promise<ParsedPage> {\n const raw = rawContent ?? (await readFile(filePath, \"utf8\"));\n const parsed = matter(raw);\n const fm = parsed.data as Record<string, unknown>;\n const content = parsed.content;\n\n const title = extractTitle(fm, content, relativePath);\n const tags = extractTags(fm);\n const outgoingLinks = extractWikiLinks(content);\n const wordCount = countWords(content);\n\n return {\n path: relativePath,\n title,\n content,\n tags,\n frontmatter: fm,\n outgoingLinks,\n wordCount,\n };\n}\n","import { createHash } from \"node:crypto\";\nimport { readFile, stat, readdir } from \"node:fs/promises\";\nimport { join, relative } from \"node:path\";\nimport Database from \"better-sqlite3\";\nimport type { Project } from \"./project.js\";\nimport { parsePage } from \"./markdown.js\";\nimport { openDb, closeDb } from \"./db.js\";\n\nexport interface IndexStats {\n indexed: number;\n skipped: number;\n deleted: number;\n errors: number;\n}\n\nasync function collectMdFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile() && e.name.endsWith(\".md\"))\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\nfunction sha256(content: string): string {\n return createHash(\"sha256\").update(content).digest(\"hex\");\n}\n\ninterface PageMetaRow {\n sha256: string;\n}\n\ninterface UpsertStmts {\n deletePages: Database.Statement;\n insertPage: Database.Statement;\n upsertMeta: Database.Statement;\n}\n\nfunction upsertParsedPage(\n stmts: UpsertStmts,\n project: Project,\n page: Awaited<ReturnType<typeof parsePage>>,\n hash: string,\n mtime: number,\n): void {\n stmts.deletePages.run(page.path);\n stmts.insertPage.run(\n page.path,\n page.title,\n page.content,\n page.tags,\n project.name,\n );\n stmts.upsertMeta.run(\n page.path,\n hash,\n mtime,\n page.wordCount,\n JSON.stringify(page.frontmatter),\n JSON.stringify(page.outgoingLinks),\n Date.now(),\n );\n}\n\nexport async function indexProject(\n project: Project,\n rebuild = false,\n): Promise<IndexStats> {\n const db = openDb(project);\n try {\n if (rebuild) {\n db.exec(\"DELETE FROM pages; DELETE FROM page_meta;\");\n }\n\n const files = await collectMdFiles(project.wikiDir);\n const stats: IndexStats = { indexed: 0, skipped: 0, deleted: 0, errors: 0 };\n\n const getMetaStmt = db.prepare<[string], PageMetaRow>(\n \"SELECT sha256 FROM page_meta WHERE path = ?\",\n );\n\n const upsertStmts: UpsertStmts = {\n deletePages: db.prepare(\"DELETE FROM pages WHERE path = ?\"),\n insertPage: db.prepare(\n \"INSERT INTO pages(path, title, content, tags, project) VALUES (?, ?, ?, ?, ?)\",\n ),\n upsertMeta: db.prepare(`\n INSERT INTO page_meta(path, sha256, mtime, word_count, frontmatter, outgoing_links, updated_at)\n VALUES (?, ?, ?, ?, ?, ?, ?)\n ON CONFLICT(path) DO UPDATE SET\n sha256 = excluded.sha256,\n mtime = excluded.mtime,\n word_count = excluded.word_count,\n frontmatter = excluded.frontmatter,\n outgoing_links = excluded.outgoing_links,\n updated_at = excluded.updated_at\n `),\n };\n\n const deleteStalePages = db.prepare(\"DELETE FROM pages WHERE path = ?\");\n const deleteStaleMeta = db.prepare(\"DELETE FROM page_meta WHERE path = ?\");\n const listMetaStmt = db.prepare<[], { path: string }>(\n \"SELECT path FROM page_meta\",\n );\n\n const processFile = db.transaction(\n (\n page: Awaited<ReturnType<typeof parsePage>>,\n hash: string,\n mtime: number,\n ) => {\n upsertParsedPage(upsertStmts, project, page, hash, mtime);\n },\n );\n\n const onDiskPaths = new Set<string>();\n\n for (const absPath of files) {\n const relPath = relative(project.root, absPath);\n onDiskPaths.add(relPath);\n\n let raw: string;\n try {\n raw = await readFile(absPath, \"utf8\");\n } catch (err) {\n stats.errors++;\n continue;\n }\n\n const hash = sha256(raw);\n const existing = getMetaStmt.get(relPath);\n\n if (existing && existing.sha256 === hash) {\n stats.skipped++;\n continue;\n }\n\n let fileStat: Awaited<ReturnType<typeof stat>>;\n try {\n fileStat = await stat(absPath);\n } catch {\n stats.errors++;\n continue;\n }\n\n let page: Awaited<ReturnType<typeof parsePage>>;\n try {\n page = await parsePage(absPath, relPath, raw);\n } catch {\n stats.errors++;\n continue;\n }\n\n try {\n processFile(page, hash, Math.floor(fileStat.mtimeMs));\n stats.indexed++;\n } catch {\n stats.errors++;\n }\n }\n\n // Remove entries for deleted files\n const allMetaPaths = listMetaStmt.all().map((r) => r.path);\n\n const stalePaths = allMetaPaths.filter((p) => !onDiskPaths.has(p));\n\n const deleteStale = db.transaction((paths: string[]) => {\n for (const p of paths) {\n deleteStalePages.run(p);\n deleteStaleMeta.run(p);\n }\n });\n\n deleteStale(stalePaths);\n stats.deleted += stalePaths.length;\n\n return stats;\n } finally {\n closeDb(db);\n }\n}\n","import Database from \"better-sqlite3\";\n\nexport interface SearchResult {\n rank: number;\n path: string;\n title: string;\n snippet: string;\n tags: string[];\n}\n\nexport interface SearchOptions {\n limit?: number;\n tags?: string[];\n}\n\ninterface FtsRow {\n path: string;\n title: string;\n tags: string;\n rank: number;\n snippet: string;\n}\n\nfunction sanitizeFtsQuery(query: string): string {\n // Split into tokens, quote each one to escape special FTS5 chars.\n // Using individual quoted tokens (AND logic) instead of a single phrase\n // so non-adjacent words still match.\n const tokens = query\n .trim()\n .split(/\\s+/)\n .filter((t) => t.length > 0);\n if (tokens.length === 0) return '\"\"';\n return tokens.map((t) => `\"${t.replace(/\"/g, '\"\"')}\"`).join(\" \");\n}\n\nfunction parseTags(raw: string): string[] {\n if (!raw \|\| raw.trim() === \"\") return [];\n return raw\n .split(\",\")\n .map((t) => t.trim())\n .filter((t) => t.length > 0);\n}\n\nexport function searchWiki(\n db: Database.Database,\n query: string,\n projectName: string,\n options?: SearchOptions,\n): SearchResult[] {\n if (!query \|\| query.trim() === \"\") {\n return [];\n }\n\n const limit = options?.limit ?? 10;\n const ftsQuery = sanitizeFtsQuery(query.trim());\n\n // Build dynamic tag WHERE clauses so filtering happens in SQL\n const filterTags = options?.tags?.length\n ? options.tags\n .map((t) => t.trim().toLowerCase())\n .filter((t) => t.length > 0)\n : [];\n\n const tagClauses = filterTags.map(() => \"AND lower(tags) LIKE ?\").join(\" \");\n const tagParams = filterTags.map((t) => `%${t}%`);\n\n const stmt = db.prepare<[string, string, ...string[], number], FtsRow>(`\n SELECT path, title, tags, bm25(pages) as rank,\n snippet(pages, 2, '', '', '...', 8) as snippet\n FROM pages\n WHERE pages MATCH ? AND project = ?\n ${tagClauses}\n ORDER BY rank\n LIMIT ?\n `);\n\n const rows = stmt.all(ftsQuery, projectName, ...tagParams, limit);\n\n const results: SearchResult[] = rows.map((row) => ({\n rank: row.rank,\n path: row.path,\n title: row.title,\n snippet: row.snippet,\n tags: parseTags(row.tags),\n }));\n\n return results;\n}\n","import { readFile } from \"node:fs/promises\";\nimport { basename, extname } from \"node:path\";\n\nexport type SourceType = \"markdown\" \| \"text\" \| \"pdf\" \| \"url\";\n\nexport interface SourceContent {\n type: SourceType;\n originalPath: string;\n content: string;\n filename: string;\n}\n\nfunction sanitizeFilename(name: string): string {\n return name.toLowerCase().replace(/\\s/g, \"-\");\n}\n\nfunction detectType(sourcePath: string): SourceType {\n if (sourcePath.startsWith(\"http://\") \|\| sourcePath.startsWith(\"https://\")) {\n return \"url\";\n }\n const ext = extname(sourcePath).toLowerCase();\n if (ext === \".pdf\") return \"pdf\";\n if (ext === \".md\") return \"markdown\";\n return \"text\";\n}\n\nfunction filenameFromUrl(url: string): string {\n try {\n const parsed = new URL(url);\n const parts = parsed.pathname.split(\"/\").filter(Boolean);\n const last = parts[parts.length - 1];\n const pagePart = last\n ? last.includes(\".\")\n ? last\n : `${last}.html`\n : \"index.html\";\n return sanitizeFilename(`${parsed.hostname}-${pagePart}`);\n } catch {\n return \"url-content.html\";\n }\n}\n\nfunction stripHtml(html: string): string {\n // Remove script and style blocks entirely\n let text = html.replace(/<script[\\s\\S]?<\\/script>/gi, \" \");\n text = text.replace(/<style[\\s\\S]?<\\/style>/gi, \" \");\n // Strip remaining tags\n text = text.replace(/<[^>]+>/g, \" \");\n // Decode common HTML entities\n text = text\n .replace(/&/gi, \"&\")\n .replace(/</gi, \"<\")\n .replace(/>/gi, \">\")\n .replace(/"/gi, '\"')\n .replace(/'/gi, \"'\")\n .replace(/ /gi, \" \");\n // Collapse whitespace\n text = text.replace(/\\s+/g, \" \").trim();\n return text;\n}\n\nasync function readPdf(filePath: string): Promise<string> {\n const pdfParse: (buf: Buffer) => Promise<{ text: string }> =\n await import(\"pdf-parse\")\n .then((m) => m.default ?? m)\n .catch(() => {\n throw new Error(\n \"PDF support requires pdf-parse: run `npm install pdf-parse` in your project\",\n );\n });\n const buffer = await readFile(filePath);\n const data = await pdfParse(buffer);\n return data.text;\n}\n\nfunction isPrivateUrl(url: string): boolean {\n try {\n const { hostname } = new URL(url);\n return (\n hostname === \"localhost\" \|\|\n hostname === \"127.0.0.1\" \|\|\n hostname === \"::1\" \|\|\n hostname.startsWith(\"169.254.\") \|\| // link-local\n hostname.startsWith(\"10.\") \|\|\n hostname.startsWith(\"192.168.\") \|\|\n /^172\\.(1[6-9]\|2\\d\|3[01])\\./.test(hostname)\n );\n } catch {\n return false;\n }\n}\n\nasync function fetchUrl(url: string): Promise<string> {\n if (isPrivateUrl(url)) {\n throw new Error(`Fetching private/localhost URLs is not allowed: ${url}`);\n }\n const response = await fetch(url);\n if (!response.ok) {\n throw new Error(\n `Failed to fetch URL ${url}: HTTP ${response.status} ${response.statusText}`,\n );\n }\n const html = await response.text();\n return stripHtml(html);\n}\n\nexport async function readSource(sourcePath: string): Promise<SourceContent> {\n const type = detectType(sourcePath);\n\n if (type === \"url\") {\n const content = await fetchUrl(sourcePath);\n const filename = filenameFromUrl(sourcePath);\n return { type, originalPath: sourcePath, content, filename };\n }\n\n if (type === \"pdf\") {\n const content = await readPdf(sourcePath);\n const raw = basename(sourcePath);\n const filename = sanitizeFilename(raw);\n return { type, originalPath: sourcePath, content, filename };\n }\n\n // markdown or text\n const content = await readFile(sourcePath, \"utf8\");\n const raw = basename(sourcePath);\n const filename = sanitizeFilename(raw);\n return { type, originalPath: sourcePath, content, filename };\n}\n","import type { KbConfig } from \"./config.js\";\n\nexport interface LlmMessage {\n role: \"user\" \| \"assistant\";\n content: string;\n}\n\nexport interface LlmAdapter {\n complete(messages: LlmMessage[], systemPrompt: string): Promise<string>;\n}\n\nfunction createAnthropicAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const apiKey = process.env[\"ANTHROPIC_API_KEY\"];\n if (!apiKey) {\n throw new Error(\"ANTHROPIC_API_KEY environment variable is not set\");\n }\n const Anthropic = await import(\"@anthropic-ai/sdk\").then(\n (m) => m.default ?? m,\n );\n const client = new Anthropic({ apiKey });\n const response = await client.messages.create({\n model,\n max_tokens: 8192,\n system: systemPrompt,\n messages: messages.map((m) => ({\n role: m.role,\n content: m.content,\n })),\n });\n const block = response.content[0];\n if (!block \|\| block.type !== \"text\") {\n throw new Error(\"Anthropic returned no text content\");\n }\n return block.text;\n },\n };\n}\n\nfunction createOpenAiAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const apiKey = process.env[\"OPENAI_API_KEY\"];\n if (!apiKey) {\n throw new Error(\"OPENAI_API_KEY environment variable is not set\");\n }\n const body = {\n model,\n messages: [\n { role: \"system\", content: systemPrompt },\n ...messages.map((m) => ({ role: m.role, content: m.content })),\n ],\n };\n const response = await fetch(\n \"https://api.openai.com/v1/chat/completions\",\n {\n method: \"POST\",\n headers: {\n \"Content-Type\": \"application/json\",\n Authorization: `Bearer ${apiKey}`,\n },\n body: JSON.stringify(body),\n },\n );\n if (!response.ok) {\n const text = await response.text();\n throw new Error(`OpenAI API error: HTTP ${response.status} — ${text}`);\n }\n const data = (await response.json()) as {\n choices: Array<{ message: { content: string } }>;\n };\n const content = data.choices[0]?.message?.content;\n if (!content) {\n throw new Error(\"OpenAI returned no content\");\n }\n return content;\n },\n };\n}\n\nfunction createOllamaAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const baseUrl =\n process.env[\"OLLAMA_BASE_URL\"] ?? \"http://localhost:11434\";\n const body = {\n model,\n messages: [\n { role: \"system\", content: systemPrompt },\n ...messages.map((m) => ({ role: m.role, content: m.content })),\n ],\n stream: false,\n };\n const response = await fetch(`${baseUrl}/api/chat`, {\n method: \"POST\",\n headers: { \"Content-Type\": \"application/json\" },\n body: JSON.stringify(body),\n });\n if (!response.ok) {\n const text = await response.text();\n throw new Error(`Ollama API error: HTTP ${response.status} — ${text}`);\n }\n const data = (await response.json()) as {\n message?: { content: string };\n };\n const content = data.message?.content;\n if (!content) {\n throw new Error(\"Ollama returned no content\");\n }\n return content;\n },\n };\n}\n\nexport function createLlmAdapter(config: KbConfig): LlmAdapter {\n const { provider, model } = config.llm;\n switch (provider) {\n case \"anthropic\":\n return createAnthropicAdapter(model);\n case \"openai\":\n return createOpenAiAdapter(model);\n case \"ollama\":\n return createOllamaAdapter(model);\n default: {\n const _exhaustive: never = provider;\n throw new Error(`Unsupported LLM provider: ${String(_exhaustive)}`);\n }\n }\n}\n","import { readFile, writeFile, mkdir, appendFile } from \"node:fs/promises\";\nimport { join, dirname, resolve } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport type { LlmAdapter } from \"./llm.js\";\nimport type { IngestResult } from \"./ingest-types.js\";\nimport { readSource } from \"./source-reader.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport interface IngestOptions {\n apply?: boolean;\n batch?: boolean;\n}\n\nexport interface IngestPlan {\n result: IngestResult;\n sourceFile: string;\n dryRun: boolean;\n}\n\nconst SYSTEM_PROMPT = `You are an AI assistant maintaining a knowledge base wiki.\nYou will be given a new source document and the current state of the wiki.\nYour task is to integrate the new knowledge into the wiki.\n\nReturn ONLY a JSON object matching this exact schema (no markdown fences):\n{\n \"summary\": { \"path\": \"wiki/sources/<filename>-summary.md\", \"content\": \"...\" },\n \"updates\": [{ \"path\": \"...\", \"content\": \"...\", \"reason\": \"...\" }],\n \"newPages\": [{ \"path\": \"...\", \"content\": \"...\", \"reason\": \"...\" }],\n \"indexUpdate\": \"...\",\n \"logEntry\": \"...\"\n}`;\n\nfunction assertWithinRoot(absPath: string, root: string): void {\n const resolvedPath = resolve(absPath);\n const resolvedRoot = resolve(root) + \"/\";\n if (!resolvedPath.startsWith(resolvedRoot)) {\n throw new Error(\n `Unsafe path rejected: \"${absPath}\" is outside project root`,\n );\n }\n}\n\nasync function readFileSafe(filePath: string): Promise<string> {\n try {\n return await readFile(filePath, \"utf8\");\n } catch {\n return \"\";\n }\n}\n\nfunction parseIngestResult(raw: string): IngestResult {\n const cleaned = raw\n .replace(/^```(?:json)?\\s/i, \"\")\n .replace(/\\s```\\s$/i, \"\")\n .trim();\n let parsed: unknown;\n try {\n parsed = JSON.parse(cleaned);\n } catch (err) {\n throw new Error(\n `Invalid LLM response: could not parse JSON. Raw response: ${cleaned.slice(0, 200)}`,\n );\n }\n\n if (parsed === null \|\| typeof parsed !== \"object\" \|\| Array.isArray(parsed)) {\n throw new Error(\"Invalid LLM response: expected a JSON object\");\n }\n\n const obj = parsed as Record<string, unknown>;\n\n if (\n !obj[\"summary\"] \|\|\n typeof obj[\"summary\"] !== \"object\" \|\|\n Array.isArray(obj[\"summary\"])\n ) {\n throw new Error('Invalid LLM response: missing \"summary\" object');\n }\n\n const summary = obj[\"summary\"] as Record<string, unknown>;\n if (\n typeof summary[\"path\"] !== \"string\" \|\|\n typeof summary[\"content\"] !== \"string\"\n ) {\n throw new Error(\n 'Invalid LLM response: \"summary\" must have \"path\" and \"content\" strings',\n );\n }\n\n if (!Array.isArray(obj[\"updates\"])) {\n throw new Error('Invalid LLM response: \"updates\" must be an array');\n }\n\n if (!Array.isArray(obj[\"newPages\"])) {\n throw new Error('Invalid LLM response: \"newPages\" must be an array');\n }\n\n if (typeof obj[\"indexUpdate\"] !== \"string\") {\n throw new Error('Invalid LLM response: \"indexUpdate\" must be a string');\n }\n\n if (typeof obj[\"logEntry\"] !== \"string\") {\n throw new Error('Invalid LLM response: \"logEntry\" must be a string');\n }\n\n const updates = (obj[\"updates\"] as unknown[]).map((u, i) => {\n if (typeof u !== \"object\" \|\| u === null \|\| Array.isArray(u)) {\n throw new Error(`Invalid LLM response: updates[${i}] must be an object`);\n }\n const update = u as Record<string, unknown>;\n if (\n typeof update[\"path\"] !== \"string\" \|\|\n typeof update[\"content\"] !== \"string\" \|\|\n typeof update[\"reason\"] !== \"string\"\n ) {\n throw new Error(\n `Invalid LLM response: updates[${i}] must have path, content, and reason strings`,\n );\n }\n return {\n path: update[\"path\"],\n content: update[\"content\"],\n reason: update[\"reason\"],\n };\n });\n\n const newPages = (obj[\"newPages\"] as unknown[]).map((p, i) => {\n if (typeof p !== \"object\" \|\| p === null \|\| Array.isArray(p)) {\n throw new Error(`Invalid LLM response: newPages[${i}] must be an object`);\n }\n const page = p as Record<string, unknown>;\n if (\n typeof page[\"path\"] !== \"string\" \|\|\n typeof page[\"content\"] !== \"string\" \|\|\n typeof page[\"reason\"] !== \"string\"\n ) {\n throw new Error(\n `Invalid LLM response: newPages[${i}] must have path, content, and reason strings`,\n );\n }\n return {\n path: page[\"path\"],\n content: page[\"content\"],\n reason: page[\"reason\"],\n };\n });\n\n return {\n summary: { path: summary[\"path\"], content: summary[\"content\"] },\n updates,\n newPages,\n indexUpdate: obj[\"indexUpdate\"] as string,\n logEntry: obj[\"logEntry\"] as string,\n };\n}\n\nasync function applyIngestResult(\n project: Project,\n result: IngestResult,\n sourceContent: string,\n sourceFilename: string,\n): Promise<void> {\n // Write summary\n const summaryAbsPath = join(project.root, result.summary.path);\n assertWithinRoot(summaryAbsPath, project.root);\n await mkdir(dirname(summaryAbsPath), { recursive: true });\n await writeFile(summaryAbsPath, result.summary.content, \"utf8\");\n\n // Write updated pages\n for (const update of result.updates) {\n const absPath = join(project.root, update.path);\n assertWithinRoot(absPath, project.root);\n await mkdir(dirname(absPath), { recursive: true });\n await writeFile(absPath, update.content, \"utf8\");\n }\n\n // Write new pages\n for (const newPage of result.newPages) {\n const absPath = join(project.root, newPage.path);\n assertWithinRoot(absPath, project.root);\n await mkdir(dirname(absPath), { recursive: true });\n await writeFile(absPath, newPage.content, \"utf8\");\n }\n\n // Update _index.md\n const indexPath = join(project.wikiDir, \"_index.md\");\n await writeFile(indexPath, result.indexUpdate, \"utf8\");\n\n // Write source file to sources directory\n const sourceDestPath = join(project.sourcesDir, sourceFilename);\n await mkdir(project.sourcesDir, { recursive: true });\n await writeFile(sourceDestPath, sourceContent, \"utf8\");\n\n // Append to log.md\n const logPath = join(project.wikiDir, \"log.md\");\n const timestamp = new Date().toISOString().split(\"T\")[0];\n const logLine = `- ${timestamp}: ${result.logEntry}\\n`;\n await appendFile(logPath, logLine, \"utf8\");\n\n // Re-index\n await indexProject(project);\n}\n\nexport async function ingestSource(\n project: Project,\n sourcePath: string,\n llm: LlmAdapter,\n options?: IngestOptions,\n): Promise<IngestPlan> {\n const apply = options?.apply ?? false;\n\n // 1. Read source content\n const sourceContent = await readSource(sourcePath);\n\n // 2. Read current wiki index\n const indexPath = join(project.wikiDir, \"_index.md\");\n const currentIndex = await readFileSafe(indexPath);\n\n // 3. Read schema\n const schemaPath = join(project.kbDir, \"schema.md\");\n const schema = await readFileSafe(schemaPath);\n\n // 4. Build user message\n const userMessage = `## Wiki Schema\n${schema}\n\n## Current Wiki Index\n${currentIndex}\n\n## New Source: ${sourceContent.filename}\n${sourceContent.content}\n\nIntegrate this source into the wiki following the schema above.`;\n\n // 5. Call LLM\n const raw = await llm.complete(\n [{ role: \"user\", content: userMessage }],\n SYSTEM_PROMPT,\n );\n\n // 6. Parse response\n const result = parseIngestResult(raw);\n\n // 7. Apply if requested\n if (apply) {\n await applyIngestResult(\n project,\n result,\n sourceContent.content,\n sourceContent.filename,\n );\n }\n\n const sourceFile = join(project.sourcesDir, sourceContent.filename);\n\n return {\n result,\n sourceFile,\n dryRun: !apply,\n };\n}\n","import { readFile, writeFile, mkdir, appendFile } from \"node:fs/promises\";\nimport { existsSync } from \"node:fs\";\nimport { join, dirname, resolve } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport type { LlmAdapter } from \"./llm.js\";\nimport { openDb, closeDb } from \"./db.js\";\nimport { searchWiki } from \"./search.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport interface QueryResult {\n answer: string;\n sources: string[];\n}\n\nexport interface QueryOptions {\n save?: string;\n}\n\nconst SYSTEM_PROMPT = `You are a knowledgeable assistant answering questions about a project's knowledge base.\nAnswer concisely using only information from the provided wiki pages.\nUse [[page-name]] wikilink syntax to cite specific wiki pages in your answer.\nFormat your answer in markdown.`;\n\nfunction assertWithinRoot(absPath: string, root: string): void {\n const resolvedPath = resolve(absPath);\n const resolvedRoot = resolve(root) + \"/\";\n if (!resolvedPath.startsWith(resolvedRoot)) {\n throw new Error(\n `Unsafe path rejected: \"${absPath}\" is outside project root`,\n );\n }\n}\n\nasync function readFileSafe(filePath: string): Promise<string> {\n try {\n return await readFile(filePath, \"utf8\");\n } catch {\n return \"\";\n }\n}\n\nexport async function queryWiki(\n project: Project,\n question: string,\n llm: LlmAdapter,\n options?: QueryOptions,\n): Promise<QueryResult> {\n // 1. Auto-index if db doesn't exist\n const dbPath = join(project.kbDir, \"index.db\");\n if (!existsSync(dbPath)) {\n await indexProject(project);\n }\n\n // 2. Search for top relevant pages\n const db = openDb(project);\n let searchResults;\n try {\n searchResults = searchWiki(db, question, project.name, { limit: 10 });\n } finally {\n closeDb(db);\n }\n\n // 3. Read full content of each result page\n const pages: Array<{ path: string; title: string; content: string }> = [];\n for (const result of searchResults) {\n const absPath = join(project.root, result.path);\n const content = await readFileSafe(absPath);\n if (content) {\n pages.push({ path: result.path, title: result.title, content });\n }\n }\n\n // 4. Build user message\n const pagesSection =\n pages.length > 0\n ? pages\n .map((p) => `### ${p.title} (${p.path})\\n${p.content}`)\n .join(\"\\n\\n\")\n : \"(No wiki pages found for this query.)\";\n\n const userMessage = `## Question\\n${question}\\n\\n## Relevant Wiki Pages\\n\\n${pagesSection}`;\n\n // 5. Call LLM\n const answer = await llm.complete(\n [{ role: \"user\", content: userMessage }],\n SYSTEM_PROMPT,\n );\n\n const sources = pages.map((p) => p.path);\n\n // 6. If save option provided, write answer as wiki page and append to log\n if (options?.save) {\n const saveRelPath = options.save;\n const saveAbsPath = join(project.root, saveRelPath);\n assertWithinRoot(saveAbsPath, project.root);\n\n await mkdir(dirname(saveAbsPath), { recursive: true });\n await writeFile(saveAbsPath, answer, \"utf8\");\n\n // Append to log.md\n const logPath = join(project.wikiDir, \"log.md\");\n const timestamp = new Date().toISOString().split(\"T\")[0];\n const logEntry = `\\n## ${timestamp} — Queried: ${question}\\n\\nSaved to: ${saveRelPath}\\n`;\n await appendFile(logPath, logEntry, \"utf8\");\n\n // Re-index so saved page is searchable\n await indexProject(project);\n }\n\n return { answer, sources };\n}\n","import { readdir, stat } from \"node:fs/promises\";\nimport { join, relative, basename, extname } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport { openDb, closeDb } from \"./db.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport type LintSeverity = \"warning\" \| \"info\";\n\nexport interface LintIssue {\n severity: LintSeverity;\n code: string;\n path: string;\n message: string;\n detail?: string;\n}\n\nexport interface LintResult {\n issues: LintIssue[];\n pagesChecked: number;\n sourcesChecked: number;\n}\n\ninterface PageMetaRow {\n path: string;\n outgoing_links: string;\n word_count: number;\n mtime: number;\n updated_at: number;\n}\n\nasync function collectMdFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile() && e.name.endsWith(\".md\"))\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\nasync function collectSourceFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile())\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\n/\n Build a set of \"keys\" for wiki pages for wikilink resolution.\n * A wikilink [[foo-bar]] can match:\n * - a page whose filename (without extension) is \"foo-bar\"\n * - a page whose relative path is \"foo-bar\" or \"foo-bar.md\"\n /\nfunction buildPageKeySet(\n relPaths: string[],\n projectRoot: string,\n wikiDir: string,\n): Set<string> {\n const keys = new Set<string>();\n for (const rp of relPaths) {\n // rp is relative to projectRoot, e.g. \"wiki/concepts/foo.md\"\n keys.add(rp);\n // without extension\n keys.add(rp.replace(/\\.md$/i, \"\"));\n // filename without extension\n const fname = basename(rp, \".md\");\n keys.add(fname);\n // relative path from wikiDir\n const absPath = join(projectRoot, rp);\n const relToWiki = relative(wikiDir, absPath);\n keys.add(relToWiki);\n keys.add(relToWiki.replace(/\\.md$/i, \"\"));\n }\n return keys;\n}\n\nexport async function lintProject(project: Project): Promise<LintResult> {\n // Ensure index is up to date\n await indexProject(project);\n\n const issues: LintIssue[] = [];\n\n // Collect all wiki md files\n const absWikiFiles = await collectMdFiles(project.wikiDir);\n const relWikiPaths = absWikiFiles.map((f) => relative(project.root, f));\n\n const pagesChecked = relWikiPaths.length;\n\n // Always collect source files so sourcesChecked is accurate\n const sourceFiles = await collectSourceFiles(project.sourcesDir);\n const sourcesChecked = sourceFiles.filter(\n (f) => basename(f) !== \".gitkeep\",\n ).length;\n\n if (pagesChecked === 0) {\n return { issues, pagesChecked: 0, sourcesChecked };\n }\n\n // Build page key set for wikilink resolution\n const pageKeySet = buildPageKeySet(\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n\n // Query all page_meta rows\n const db = openDb(project);\n let rows: PageMetaRow[];\n try {\n rows = db\n .prepare<\n [],\n PageMetaRow\n >(\"SELECT path, outgoing_links, word_count, mtime, updated_at FROM page_meta\")\n .all();\n } finally {\n closeDb(db);\n }\n\n // Build a map from path -> row for quick lookup\n const metaMap = new Map<string, PageMetaRow>();\n for (const row of rows) {\n metaMap.set(row.path, row);\n }\n\n // Build inbound link map\n const inboundLinks = new Map<string, Set<string>>();\n for (const rp of relWikiPaths) {\n inboundLinks.set(rp, new Set());\n }\n\n for (const row of rows) {\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n // Find which page this link resolves to\n const resolved = resolveLink(\n link,\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n if (resolved !== null) {\n const set = inboundLinks.get(resolved);\n if (set) {\n set.add(row.path);\n }\n }\n }\n }\n\n // Read _index.md outgoing links for MISSING_INDEX check\n const indexPath = relWikiPaths.find((p) => basename(p) === \"_index.md\");\n let indexLinks: Set<string> = new Set();\n if (indexPath) {\n const indexRow = metaMap.get(indexPath);\n if (indexRow) {\n let links: string[] = [];\n try {\n links = JSON.parse(indexRow.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n const resolved = resolveLink(\n link,\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n if (resolved !== null) {\n indexLinks.add(resolved);\n }\n }\n }\n }\n\n // --- CHECK 1: ORPHAN_PAGE ---\n for (const rp of relWikiPaths) {\n if (basename(rp) === \"_index.md\") continue;\n const inbound = inboundLinks.get(rp);\n if (!inbound \|\| inbound.size === 0) {\n issues.push({\n severity: \"warning\",\n code: \"ORPHAN_PAGE\",\n path: rp,\n message: \"Orphan page (no inbound links)\",\n });\n }\n }\n\n // --- CHECK 2: BROKEN_LINK ---\n for (const row of rows) {\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n if (!isLinkResolvable(link, pageKeySet)) {\n issues.push({\n severity: \"warning\",\n code: \"BROKEN_LINK\",\n path: row.path,\n message: `Broken wikilink [[${link}]] not found`,\n detail: link,\n });\n }\n }\n }\n\n // --- CHECK 3: STUB_PAGE ---\n for (const row of rows) {\n if (basename(row.path) === \"_index.md\") continue;\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n if (links.length === 0 && row.word_count < 50) {\n issues.push({\n severity: \"info\",\n code: \"STUB_PAGE\",\n path: row.path,\n message: `Stub page (no links, < 50 words)`,\n });\n }\n }\n\n // --- CHECK 4: STALE_SUMMARY ---\n // wiki/sources/foo-summary.md <-> sources/foo.\n const wikiSourcesDir = join(project.wikiDir, \"sources\");\n\n for (const rp of relWikiPaths) {\n // Check if the path is under wiki/sources/\n const absWikiPage = join(project.root, rp);\n const relToWikiSources = relative(wikiSourcesDir, absWikiPage);\n\n // Skip if not under wiki/sources/ (would start with \"..\")\n if (relToWikiSources.startsWith(\"..\")) continue;\n\n // Convention: wiki/sources/foo-summary.md <-> sources/foo.\n const summaryBasename = basename(rp, \".md\");\n // Strip -summary suffix\n const sourceBasename = summaryBasename.endsWith(\"-summary\")\n ? summaryBasename.slice(0, -\"-summary\".length)\n : summaryBasename;\n\n // Find matching source file\n const matchingSource = sourceFiles.find((sf) => {\n const sfBase = basename(sf, extname(sf));\n return sfBase === sourceBasename;\n });\n\n if (!matchingSource) continue;\n\n try {\n const summaryRow = metaMap.get(rp);\n if (!summaryRow) continue;\n\n const [sourceStat, summaryStat] = await Promise.all([\n stat(matchingSource),\n stat(join(project.root, summaryRow.path)),\n ]);\n\n if (sourceStat.mtimeMs > summaryStat.mtimeMs) {\n issues.push({\n severity: \"warning\",\n code: \"STALE_SUMMARY\",\n path: rp,\n message: \"Source updated after summary\",\n detail: relative(project.root, matchingSource),\n });\n }\n } catch {\n // Ignore stat errors\n }\n }\n\n // --- CHECK 5: MISSING_INDEX ---\n for (const rp of relWikiPaths) {\n if (basename(rp) === \"_index.md\") continue;\n if (!indexPath) {\n // No _index.md exists — skip this check\n continue;\n }\n if (!indexLinks.has(rp)) {\n // Check by filename too\n const fname = basename(rp, \".md\");\n if (!indexLinks.has(fname)) {\n issues.push({\n severity: \"info\",\n code: \"MISSING_INDEX\",\n path: rp,\n message: \"Not in _index.md\",\n });\n }\n }\n }\n\n return { issues, pagesChecked, sourcesChecked };\n}\n\nfunction resolveLink(\n link: string,\n relPaths: string[],\n projectRoot: string,\n wikiDir: string,\n): string \| null {\n for (const rp of relPaths) {\n const fname = basename(rp, \".md\");\n if (fname === link) return rp;\n if (rp === link \|\| rp === `${link}.md`) return rp;\n // relative to wikiDir\n const absPath = join(projectRoot, rp);\n const relToWiki = relative(wikiDir, absPath);\n if (relToWiki === link \|\| relToWiki.replace(/\\.md$/i, \"\") === link) {\n return rp;\n }\n }\n return null;\n}\n\nfunction isLinkResolvable(link: string, pageKeySet: Set<string>): boolean {\n return pageKeySet.has(link);\n}\n","// packages/core/src/log-parser.ts\n\nexport interface ParsedLogEntry {\n heading: string;\n body: string;\n}\n\n/\n Parses a log.md file into an array of entries.\n * Each entry starts with a level-2 heading (## ...).\n * The top-level \"# Activity Log\" heading is skipped.\n */\nexport function parseLogEntries(content: string): ParsedLogEntry[] {\n const entries: ParsedLogEntry[] = [];\n const sections = content.split(/^(?=## )/m);\n\n for (const section of sections) {\n const trimmed = section.trim();\n if (!trimmed) continue;\n if (trimmed.startsWith(\"# \")) continue;\n if (!trimmed.startsWith(\"## \")) continue;\n\n const newlineIdx = trimmed.indexOf(\"\\n\");\n if (newlineIdx === -1) {\n entries.push({ heading: trimmed.slice(3).trim(), body: \"\" });\n } else {\n const heading = trimmed.slice(3, newlineIdx).trim();\n const body = trimmed.slice(newlineIdx + 1).trim();\n entries.push({ heading, body });\n }\n }\n\n return 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package/dist/index.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"sources":["../src/init.ts","../src/config.ts","../src/project.ts","../src/db.ts","../src/markdown.ts","../src/indexer.ts","../src/search.ts","../src/source-reader.ts","../src/llm.ts","../src/ingest.ts","../src/query.ts","../src/lint.ts","../src/log-parser.ts","../src/index.ts"],"sourcesContent":["import { mkdir, writeFile, access, rm } from \"node:fs/promises\";\nimport { join, basename } from \"node:path\";\nimport TOML from \"@iarna/toml\";\n\nexport interface InitOptions {\n name: string;\n directory: string; // absolute path where to init\n}\n\nfunction resolveProjectName(options: InitOptions): string {\n return options.name \|\| basename(options.directory);\n}\n\nfunction buildConfigToml(projectName: string): string {\n const config = {\n project: {\n name: projectName,\n version: \"0.1.0\",\n },\n directories: {\n sources: \"sources\",\n wiki: \"wiki\",\n },\n llm: {\n provider: \"anthropic\",\n model: \"claude-sonnet-4-20250514\",\n },\n };\n\n const tomlStr = TOML.stringify(config as TOML.JsonMap);\n return (\n tomlStr +\n '\\n[dependencies]\\n# shared-glossary = { path = \"../shared-glossary\" }\\n'\n );\n}\n\nfunction buildSchemaMd(): string {\n return `# KB Schema — LLM Instructions\n\nThis file defines the conventions for this knowledge base. The \\`kb\\` CLI and any\nLLM operating on this wiki MUST follow these rules.\n\n---\n\n## Wiki Structure Conventions\n\n- All pages live under the \\`wiki/\\` directory.\n- \\`wiki/_index.md\\` is the wiki root and serves as a table of contents.\n- Sub-topics may be organised into sub-directories: \\`wiki/<topic>/_index.md\\`.\n- File names use kebab-case, e.g. \\`wiki/authentication-flow.md\\`.\n- Every page must have a valid YAML frontmatter block.\n\n---\n\n## Frontmatter Schema\n\nEvery wiki page must begin with a YAML frontmatter block:\n\n\\`\\`\\`yaml\n---\ntitle: <Human-readable page title>\ntags: [tag1, tag2] # optional; array of lowercase strings\ncreated: <ISO 8601 date> # e.g. 2026-04-05\nupdated: <ISO 8601 date> # updated whenever content changes\nsource: <path or URL> # optional; original source material\n---\n\\`\\`\\`\n\nRequired fields: \\`title\\`, \\`created\\`.\n\n---\n\n## Page Templates\n\n### Entity Page\nUse for: people, systems, services, tools.\n\n\\`\\`\\`markdown\n---\ntitle: <Entity Name>\ntags: [entity]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# <Entity Name>\n\nType: <system \| person \| service \| tool>\n\n## Overview\n\n<One-paragraph description.>\n\n## Key Attributes\n\n- Attribute: value\n\n## Related\n\n- [[related-page]]\n\\`\\`\\`\n\n### Concept Page\nUse for: ideas, patterns, terminology.\n\n\\`\\`\\`markdown\n---\ntitle: <Concept Name>\ntags: [concept]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# <Concept Name>\n\n## Definition\n\n<Clear definition in 1-3 sentences.>\n\n## Context\n\n<When and why this concept matters in the project.>\n\n## See Also\n\n- [[related-concept]]\n\\`\\`\\`\n\n### Source Summary Page\nUse for: summarised source material (docs, papers, meetings).\n\n\\`\\`\\`markdown\n---\ntitle: Summary — <Source Title>\ntags: [source-summary]\ncreated: <ISO date>\nsource: <path or URL>\n---\n\n# Summary — <Source Title>\n\n## Key Points\n\n- Point one\n- Point two\n\n## Decisions / Implications\n\n<What this source means for the project.>\n\n## Raw Source\n\nSee \\`sources/<filename>\\`.\n\\`\\`\\`\n\n### Comparison Page\nUse for: side-by-side evaluation of options.\n\n\\`\\`\\`markdown\n---\ntitle: Comparison — <Topic>\ntags: [comparison]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# Comparison — <Topic>\n\n\| Criterion \| Option A \| Option B \|\n\|-----------\|----------\|----------\|\n\| ... \| ... \| ... \|\n\n## Recommendation\n\n<Which option and why.>\n\\`\\`\\`\n\n---\n\n## Wikilink Conventions\n\n- Basic link: \\`[[page-name]]\\` — links to \\`wiki/page-name.md\\`.\n- Display text: \\`[[page-name\|display text]]\\` — renders as \"display text\".\n- Cross-directory: \\`[[topic/sub-page]]\\`.\n- All wikilink targets must be lowercase kebab-case matching the file name without \\`.md\\`.\n\n---\n\n## Ingest Workflow\n\n1. Place the source file in \\`sources/\\` (PDF, Markdown, plain text, etc.).\n2. Run \\`kb ingest sources/<filename>\\`.\n3. The CLI reads the file, calls the configured LLM, and generates a source-summary\n page in \\`wiki/\\`.\n4. The summary page is linked from \\`wiki/_index.md\\` under Sources.\n5. An entry is appended to \\`log.md\\`.\n\n---\n\n## Query Workflow\n\n1. Run \\`kb query \"<natural-language question>\"\\`.\n2. The CLI searches the wiki index for relevant pages.\n3. Relevant page content is assembled into a prompt context.\n4. The LLM answers the question, citing wikilinks.\n5. The answer is printed to stdout. Nothing is written to disk unless \\`--save\\` is passed.\n\n---\n\n## Lint Workflow\n\nRun \\`kb lint\\` to check for:\n\n- Pages missing required frontmatter fields (\\`title\\`, \\`created\\`).\n- Broken wikilinks (targets that don't resolve to an existing page).\n- Pages not reachable from \\`wiki/_index.md\\`.\n- Duplicate page titles across the wiki.\n- Frontmatter fields with invalid types or formats.\n\nLint exits with code 0 on success, 1 if errors are found.\n`;\n}\n\nfunction buildIndexMd(projectName: string, isoDate: string): string {\n return `---\ntitle: ${projectName} Knowledge Base\ncreated: ${isoDate}\n---\n\n# ${projectName} Knowledge Base\n\n> This wiki is maintained by the \\`kb\\` CLI tool.\n\n## Pages\n\n(No pages yet. Use \\`kb ingest <source>\\` to add content.)\n\n## Sources\n\n(No sources yet.)\n`;\n}\n\nfunction buildLogMd(projectName: string, isoDate: string): string {\n return `# Activity Log\n\n## ${isoDate} — Project initialized\n\nProject \\`${projectName}\\` initialized.\n`;\n}\n\nasync function kbDirExists(directory: string): Promise<boolean> {\n try {\n await access(join(directory, \".kb\"));\n return true;\n } catch {\n return false;\n }\n}\n\nexport async function initProject(options: InitOptions): Promise<void> {\n const projectName = resolveProjectName(options);\n const { directory } = options;\n\n if (await kbDirExists(directory)) {\n throw new Error(\n `Knowledge base already initialized: .kb/ already exists in ${directory}`,\n );\n }\n\n const isoDate = new Date().toISOString().split(\"T\")[0]!;\n\n try {\n await Promise.all([\n mkdir(join(directory, \".kb\"), { recursive: true }),\n mkdir(join(directory, \"sources\"), { recursive: true }),\n mkdir(join(directory, \"wiki\"), { recursive: true }),\n ]);\n\n await Promise.all([\n writeFile(\n join(directory, \".kb\", \"config.toml\"),\n buildConfigToml(projectName),\n \"utf8\",\n ),\n writeFile(join(directory, \".kb\", \"schema.md\"), buildSchemaMd(), \"utf8\"),\n writeFile(join(directory, \"sources\", \".gitkeep\"), \"\", \"utf8\"),\n writeFile(\n join(directory, \"wiki\", \"_index.md\"),\n buildIndexMd(projectName, isoDate),\n \"utf8\",\n ),\n writeFile(\n join(directory, \"log.md\"),\n buildLogMd(projectName, isoDate),\n \"utf8\",\n ),\n ]);\n } catch (error) {\n // Rollback: remove .kb/ if it was created\n await rm(join(directory, \".kb\"), { recursive: true, force: true });\n throw error;\n }\n}\n","import { readFile } from \"node:fs/promises\";\nimport TOML from \"@iarna/toml\";\n\nexport interface KbConfig {\n project: {\n name: string;\n version: string;\n };\n directories: {\n sources: string;\n wiki: string;\n };\n llm: {\n provider: \"anthropic\" \| \"openai\" \| \"ollama\";\n model: string;\n };\n dependencies: Record<\n string,\n { path?: string; git?: string; branch?: string; mode?: string }\n >;\n}\n\nconst VALID_PROVIDERS = [\"anthropic\", \"openai\", \"ollama\"] as const;\n\nfunction requireSafeRelativePath(val: string, field: string): void {\n if (val.startsWith(\"/\") \|\| val.split(\"/\").includes(\"..\")) {\n throw new Error(\n `Invalid config: ${field} must be a safe relative path, got \"${val}\"`,\n );\n }\n}\n\nfunction requireString(\n obj: Record<string, unknown>,\n key: string,\n context: string,\n): string {\n const val = obj[key];\n if (typeof val !== \"string\" \|\| val.trim() === \"\") {\n throw new Error(\n `Invalid config: missing required field \"${context}.${key}\"`,\n );\n }\n return val;\n}\n\nfunction requireSection(\n obj: Record<string, unknown>,\n key: string,\n): Record<string, unknown> {\n const val = obj[key];\n if (\n val === undefined \|\|\n val === null \|\|\n typeof val !== \"object\" \|\|\n Array.isArray(val)\n ) {\n throw new Error(`Invalid config: missing required section \"[${key}]\"`);\n }\n return val as Record<string, unknown>;\n}\n\nexport async function parseConfig(configPath: string): Promise<KbConfig> {\n let raw: string;\n try {\n raw = await readFile(configPath, \"utf8\");\n } catch (err: unknown) {\n const message = err instanceof Error ? err.message : String(err);\n throw new Error(`Config file not found: ${configPath}\\n${message}`);\n }\n\n let parsed: Record<string, unknown>;\n try {\n parsed = TOML.parse(raw) as Record<string, unknown>;\n } catch (err: unknown) {\n const message = err instanceof Error ? err.message : String(err);\n throw new Error(`Invalid TOML in config file ${configPath}: ${message}`);\n }\n\n const project = requireSection(parsed, \"project\");\n const name = requireString(project, \"name\", \"project\");\n const version = requireString(project, \"version\", \"project\");\n\n const directories = requireSection(parsed, \"directories\");\n const sources = requireString(directories, \"sources\", \"directories\");\n requireSafeRelativePath(sources, \"directories.sources\");\n const wiki = requireString(directories, \"wiki\", \"directories\");\n requireSafeRelativePath(wiki, \"directories.wiki\");\n\n const llm = requireSection(parsed, \"llm\");\n const providerRaw = requireString(llm, \"provider\", \"llm\");\n if (!(VALID_PROVIDERS as readonly string[]).includes(providerRaw)) {\n throw new Error(\n `Invalid config: llm.provider must be one of ${VALID_PROVIDERS.join(\", \")}, got \"${providerRaw}\"`,\n );\n }\n const provider = providerRaw as KbConfig[\"llm\"][\"provider\"];\n const model = requireString(llm, \"model\", \"llm\");\n\n const rawDeps = parsed[\"dependencies\"];\n const dependencies: KbConfig[\"dependencies\"] = {};\n if (\n rawDeps !== undefined &&\n rawDeps !== null &&\n typeof rawDeps === \"object\" &&\n !Array.isArray(rawDeps)\n ) {\n for (const [depKey, depVal] of Object.entries(\n rawDeps as Record<string, unknown>,\n )) {\n if (\n typeof depVal === \"object\" &&\n depVal !== null &&\n !Array.isArray(depVal)\n ) {\n const dep = depVal as Record<string, unknown>;\n dependencies[depKey] = {\n ...(typeof dep[\"path\"] === \"string\" ? { path: dep[\"path\"] } : {}),\n ...(typeof dep[\"git\"] === \"string\" ? { git: dep[\"git\"] } : {}),\n ...(typeof dep[\"branch\"] === \"string\"\n ? { branch: dep[\"branch\"] }\n : {}),\n ...(typeof dep[\"mode\"] === \"string\" ? { mode: dep[\"mode\"] } : {}),\n };\n }\n }\n }\n\n return {\n project: { name, version },\n directories: { sources, wiki },\n llm: { provider, model },\n dependencies,\n };\n}\n","import { access } from \"node:fs/promises\";\nimport { join, dirname, resolve } from \"node:path\";\nimport { parseConfig, type KbConfig } from \"./config.js\";\n\nexport interface Project {\n name: string;\n root: string;\n kbDir: string;\n sourcesDir: string;\n wikiDir: string;\n config: KbConfig;\n}\n\nasync function hasKbDir(dir: string): Promise<boolean> {\n try {\n await access(join(dir, \".kb\", \"config.toml\"));\n return true;\n } catch {\n return false;\n }\n}\n\nasync function findProjectRoot(startDir: string): Promise<string \| null> {\n let current = resolve(startDir);\n\n while (true) {\n if (await hasKbDir(current)) {\n return current;\n }\n const parent = dirname(current);\n if (parent === current) {\n // Reached filesystem root\n return null;\n }\n current = parent;\n }\n}\n\nexport async function loadProject(startDir: string): Promise<Project> {\n const root = await findProjectRoot(startDir);\n if (root === null) {\n throw new Error(\n `No kb project found. Run \"kb init\" to initialize a knowledge base in the current directory.`,\n );\n }\n\n const kbDir = join(root, \".kb\");\n const configPath = join(kbDir, \"config.toml\");\n const config = await parseConfig(configPath);\n\n return {\n name: config.project.name,\n root,\n kbDir,\n sourcesDir: join(root, config.directories.sources),\n wikiDir: join(root, config.directories.wiki),\n config,\n };\n}\n\nexport async function tryLoadProject(\n startDir: string,\n): Promise<Project \| null> {\n try {\n return await loadProject(startDir);\n } catch (err: unknown) {\n if (err instanceof Error && /no kb project found/i.test(err.message)) {\n return null;\n }\n throw err;\n }\n}\n","import Database from \"better-sqlite3\";\nimport { join } from \"node:path\";\nimport type { Project } from \"./project.js\";\n\nconst SCHEMA_SQL = `\nCREATE VIRTUAL TABLE IF NOT EXISTS pages USING fts5(\n path,\n title,\n content,\n tags,\n project,\n tokenize='porter unicode61'\n);\n\nCREATE TABLE IF NOT EXISTS page_meta (\n path TEXT PRIMARY KEY,\n sha256 TEXT NOT NULL,\n mtime INTEGER NOT NULL,\n word_count INTEGER NOT NULL DEFAULT 0,\n frontmatter TEXT NOT NULL DEFAULT '{}',\n outgoing_links TEXT NOT NULL DEFAULT '[]',\n updated_at INTEGER NOT NULL\n);\n`;\n\nexport function openDb(project: Project): Database.Database {\n const dbPath = join(project.kbDir, \"index.db\");\n const db = new Database(dbPath);\n db.pragma(\"journal_mode = WAL\");\n db.exec(SCHEMA_SQL);\n return db;\n}\n\nexport function closeDb(db: Database.Database): void {\n db.close();\n}\n","import { readFile } from \"node:fs/promises\";\nimport matter from \"gray-matter\";\n\nexport interface ParsedPage {\n path: string;\n title: string;\n content: string;\n tags: string;\n frontmatter: Record<string, unknown>;\n outgoingLinks: string[];\n wordCount: number;\n}\n\nconst WIKILINK_RE = /\\[\\[([^\\]\|]+)(?:\\\|[^\\]]+)?\\]\\]/g;\nconst H1_RE = /^#\\s+(.+)$/m;\n\nfunction extractTitle(\n fm: Record<string, unknown>,\n content: string,\n relativePath: string,\n): string {\n if (typeof fm[\"title\"] === \"string\" && fm[\"title\"].trim() !== \"\") {\n return fm[\"title\"].trim();\n }\n const h1Match = H1_RE.exec(content);\n if (h1Match) {\n return h1Match[1]!.trim();\n }\n // Fallback: use filename without extension\n const filename = relativePath.split(\"/\").pop() ?? relativePath;\n return filename.replace(/\\.md$/i, \"\");\n}\n\nfunction extractTags(fm: Record<string, unknown>): string {\n const tags = fm[\"tags\"];\n if (!Array.isArray(tags)) return \"\";\n return tags.filter((t): t is string => typeof t === \"string\").join(\",\");\n}\n\nfunction extractWikiLinks(content: string): string[] {\n const links: string[] = [];\n let match: RegExpExecArray \| null;\n const re = new RegExp(WIKILINK_RE.source, \"g\");\n while ((match = re.exec(content)) !== null) {\n links.push(match[1]!.trim());\n }\n return links;\n}\n\nfunction countWords(text: string): number {\n const trimmed = text.trim();\n if (trimmed === \"\") return 0;\n return trimmed.split(/\\s+/).length;\n}\n\nexport async function parsePage(\n filePath: string,\n relativePath: string,\n rawContent?: string,\n): Promise<ParsedPage> {\n const raw = rawContent ?? (await readFile(filePath, \"utf8\"));\n const parsed = matter(raw);\n const fm = parsed.data as Record<string, unknown>;\n const content = parsed.content;\n\n const title = extractTitle(fm, content, relativePath);\n const tags = extractTags(fm);\n const outgoingLinks = extractWikiLinks(content);\n const wordCount = countWords(content);\n\n return {\n path: relativePath,\n title,\n content,\n tags,\n frontmatter: fm,\n outgoingLinks,\n wordCount,\n };\n}\n","import { createHash } from \"node:crypto\";\nimport { readFile, stat, readdir } from \"node:fs/promises\";\nimport { join, relative } from \"node:path\";\nimport Database from \"better-sqlite3\";\nimport type { Project } from \"./project.js\";\nimport { parsePage } from \"./markdown.js\";\nimport { openDb, closeDb } from \"./db.js\";\n\nexport interface IndexStats {\n indexed: number;\n skipped: number;\n deleted: number;\n errors: number;\n}\n\nasync function collectMdFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile() && e.name.endsWith(\".md\"))\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\nfunction sha256(content: string): string {\n return createHash(\"sha256\").update(content).digest(\"hex\");\n}\n\ninterface PageMetaRow {\n sha256: string;\n}\n\ninterface UpsertStmts {\n deletePages: Database.Statement;\n insertPage: Database.Statement;\n upsertMeta: Database.Statement;\n}\n\nfunction upsertParsedPage(\n stmts: UpsertStmts,\n project: Project,\n page: Awaited<ReturnType<typeof parsePage>>,\n hash: string,\n mtime: number,\n): void {\n stmts.deletePages.run(page.path);\n stmts.insertPage.run(\n page.path,\n page.title,\n page.content,\n page.tags,\n project.name,\n );\n stmts.upsertMeta.run(\n page.path,\n hash,\n mtime,\n page.wordCount,\n JSON.stringify(page.frontmatter),\n JSON.stringify(page.outgoingLinks),\n Date.now(),\n );\n}\n\nexport async function indexProject(\n project: Project,\n rebuild = false,\n): Promise<IndexStats> {\n const db = openDb(project);\n try {\n if (rebuild) {\n db.exec(\"DELETE FROM pages; DELETE FROM page_meta;\");\n }\n\n const files = await collectMdFiles(project.wikiDir);\n const stats: IndexStats = { indexed: 0, skipped: 0, deleted: 0, errors: 0 };\n\n const getMetaStmt = db.prepare<[string], PageMetaRow>(\n \"SELECT sha256 FROM page_meta WHERE path = ?\",\n );\n\n const upsertStmts: UpsertStmts = {\n deletePages: db.prepare(\"DELETE FROM pages WHERE path = ?\"),\n insertPage: db.prepare(\n \"INSERT INTO pages(path, title, content, tags, project) VALUES (?, ?, ?, ?, ?)\",\n ),\n upsertMeta: db.prepare(`\n INSERT INTO page_meta(path, sha256, mtime, word_count, frontmatter, outgoing_links, updated_at)\n VALUES (?, ?, ?, ?, ?, ?, ?)\n ON CONFLICT(path) DO UPDATE SET\n sha256 = excluded.sha256,\n mtime = excluded.mtime,\n word_count = excluded.word_count,\n frontmatter = excluded.frontmatter,\n outgoing_links = excluded.outgoing_links,\n updated_at = excluded.updated_at\n `),\n };\n\n const deleteStalePages = db.prepare(\"DELETE FROM pages WHERE path = ?\");\n const deleteStaleMeta = db.prepare(\"DELETE FROM page_meta WHERE path = ?\");\n const listMetaStmt = db.prepare<[], { path: string }>(\n \"SELECT path FROM page_meta\",\n );\n\n const processFile = db.transaction(\n (\n page: Awaited<ReturnType<typeof parsePage>>,\n hash: string,\n mtime: number,\n ) => {\n upsertParsedPage(upsertStmts, project, page, hash, mtime);\n },\n );\n\n const onDiskPaths = new Set<string>();\n\n for (const absPath of files) {\n const relPath = relative(project.root, absPath);\n onDiskPaths.add(relPath);\n\n let raw: string;\n try {\n raw = await readFile(absPath, \"utf8\");\n } catch (err) {\n stats.errors++;\n continue;\n }\n\n const hash = sha256(raw);\n const existing = getMetaStmt.get(relPath);\n\n if (existing && existing.sha256 === hash) {\n stats.skipped++;\n continue;\n }\n\n let fileStat: Awaited<ReturnType<typeof stat>>;\n try {\n fileStat = await stat(absPath);\n } catch {\n stats.errors++;\n continue;\n }\n\n let page: Awaited<ReturnType<typeof parsePage>>;\n try {\n page = await parsePage(absPath, relPath, raw);\n } catch {\n stats.errors++;\n continue;\n }\n\n try {\n processFile(page, hash, Math.floor(fileStat.mtimeMs));\n stats.indexed++;\n } catch {\n stats.errors++;\n }\n }\n\n // Remove entries for deleted files\n const allMetaPaths = listMetaStmt.all().map((r) => r.path);\n\n const stalePaths = allMetaPaths.filter((p) => !onDiskPaths.has(p));\n\n const deleteStale = db.transaction((paths: string[]) => {\n for (const p of paths) {\n deleteStalePages.run(p);\n deleteStaleMeta.run(p);\n }\n });\n\n deleteStale(stalePaths);\n stats.deleted += stalePaths.length;\n\n return stats;\n } finally {\n closeDb(db);\n }\n}\n","import Database from \"better-sqlite3\";\n\nexport interface SearchResult {\n rank: number;\n path: string;\n title: string;\n snippet: string;\n tags: string[];\n}\n\nexport interface SearchOptions {\n limit?: number;\n tags?: string[];\n}\n\ninterface FtsRow {\n path: string;\n title: string;\n tags: string;\n rank: number;\n snippet: string;\n}\n\nfunction sanitizeFtsQuery(query: string): string {\n // Split into tokens, quote each one to escape special FTS5 chars.\n // Using individual quoted tokens (AND logic) instead of a single phrase\n // so non-adjacent words still match.\n const tokens = query\n .trim()\n .split(/\\s+/)\n .filter((t) => t.length > 0);\n if (tokens.length === 0) return '\"\"';\n return tokens.map((t) => `\"${t.replace(/\"/g, '\"\"')}\"`).join(\" \");\n}\n\nfunction parseTags(raw: string): string[] {\n if (!raw \|\| raw.trim() === \"\") return [];\n return raw\n .split(\",\")\n .map((t) => t.trim())\n .filter((t) => t.length > 0);\n}\n\nexport function searchWiki(\n db: Database.Database,\n query: string,\n projectName: string,\n options?: SearchOptions,\n): SearchResult[] {\n if (!query \|\| query.trim() === \"\") {\n return [];\n }\n\n const limit = options?.limit ?? 10;\n const ftsQuery = sanitizeFtsQuery(query.trim());\n\n // Build dynamic tag WHERE clauses so filtering happens in SQL\n const filterTags = options?.tags?.length\n ? options.tags\n .map((t) => t.trim().toLowerCase())\n .filter((t) => t.length > 0)\n : [];\n\n const tagClauses = filterTags.map(() => \"AND lower(tags) LIKE ?\").join(\" \");\n const tagParams = filterTags.map((t) => `%${t}%`);\n\n const stmt = db.prepare<[string, string, ...string[], number], FtsRow>(`\n SELECT path, title, tags, bm25(pages) as rank,\n snippet(pages, 2, '', '', '...', 8) as snippet\n FROM pages\n WHERE pages MATCH ? AND project = ?\n ${tagClauses}\n ORDER BY rank\n LIMIT ?\n `);\n\n const rows = stmt.all(ftsQuery, projectName, ...tagParams, limit);\n\n const results: SearchResult[] = rows.map((row) => ({\n rank: row.rank,\n path: row.path,\n title: row.title,\n snippet: row.snippet,\n tags: parseTags(row.tags),\n }));\n\n return results;\n}\n","import { readFile } from \"node:fs/promises\";\nimport { basename, extname } from \"node:path\";\n\nexport type SourceType = \"markdown\" \| \"text\" \| \"pdf\" \| \"url\";\n\nexport interface SourceContent {\n type: SourceType;\n originalPath: string;\n content: string;\n filename: string;\n}\n\nfunction sanitizeFilename(name: string): string {\n return name.toLowerCase().replace(/\\s/g, \"-\");\n}\n\nfunction detectType(sourcePath: string): SourceType {\n if (sourcePath.startsWith(\"http://\") \|\| sourcePath.startsWith(\"https://\")) {\n return \"url\";\n }\n const ext = extname(sourcePath).toLowerCase();\n if (ext === \".pdf\") return \"pdf\";\n if (ext === \".md\") return \"markdown\";\n return \"text\";\n}\n\nfunction filenameFromUrl(url: string): string {\n try {\n const parsed = new URL(url);\n const parts = parsed.pathname.split(\"/\").filter(Boolean);\n const last = parts[parts.length - 1];\n const pagePart = last\n ? last.includes(\".\")\n ? last\n : `${last}.html`\n : \"index.html\";\n return sanitizeFilename(`${parsed.hostname}-${pagePart}`);\n } catch {\n return \"url-content.html\";\n }\n}\n\nfunction stripHtml(html: string): string {\n // Remove script and style blocks entirely\n let text = html.replace(/<script[\\s\\S]?<\\/script>/gi, \" \");\n text = text.replace(/<style[\\s\\S]?<\\/style>/gi, \" \");\n // Strip remaining tags\n text = text.replace(/<[^>]+>/g, \" \");\n // Decode common HTML entities\n text = text\n .replace(/&/gi, \"&\")\n .replace(/</gi, \"<\")\n .replace(/>/gi, \">\")\n .replace(/"/gi, '\"')\n .replace(/'/gi, \"'\")\n .replace(/ /gi, \" \");\n // Collapse whitespace\n text = text.replace(/\\s+/g, \" \").trim();\n return text;\n}\n\nasync function readPdf(filePath: string): Promise<string> {\n // Dynamic import to avoid issues if pdf-parse not available in test env\n const pdfParse = await import(\"pdf-parse\").then((m) => m.default ?? m);\n const buffer = await readFile(filePath);\n const data = await pdfParse(buffer);\n return data.text;\n}\n\nfunction isPrivateUrl(url: string): boolean {\n try {\n const { hostname } = new URL(url);\n return (\n hostname === \"localhost\" \|\|\n hostname === \"127.0.0.1\" \|\|\n hostname === \"::1\" \|\|\n hostname.startsWith(\"169.254.\") \|\| // link-local\n hostname.startsWith(\"10.\") \|\|\n hostname.startsWith(\"192.168.\") \|\|\n /^172\\.(1[6-9]\|2\\d\|3[01])\\./.test(hostname)\n );\n } catch {\n return false;\n }\n}\n\nasync function fetchUrl(url: string): Promise<string> {\n if (isPrivateUrl(url)) {\n throw new Error(`Fetching private/localhost URLs is not allowed: ${url}`);\n }\n const response = await fetch(url);\n if (!response.ok) {\n throw new Error(\n `Failed to fetch URL ${url}: HTTP ${response.status} ${response.statusText}`,\n );\n }\n const html = await response.text();\n return stripHtml(html);\n}\n\nexport async function readSource(sourcePath: string): Promise<SourceContent> {\n const type = detectType(sourcePath);\n\n if (type === \"url\") {\n const content = await fetchUrl(sourcePath);\n const filename = filenameFromUrl(sourcePath);\n return { type, originalPath: sourcePath, content, filename };\n }\n\n if (type === \"pdf\") {\n const content = await readPdf(sourcePath);\n const raw = basename(sourcePath);\n const filename = sanitizeFilename(raw);\n return { type, originalPath: sourcePath, content, filename };\n }\n\n // markdown or text\n const content = await readFile(sourcePath, \"utf8\");\n const raw = basename(sourcePath);\n const filename = sanitizeFilename(raw);\n return { type, originalPath: sourcePath, content, filename };\n}\n","import type { KbConfig } from \"./config.js\";\n\nexport interface LlmMessage {\n role: \"user\" \| \"assistant\";\n content: string;\n}\n\nexport interface LlmAdapter {\n complete(messages: LlmMessage[], systemPrompt: string): Promise<string>;\n}\n\nfunction createAnthropicAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const apiKey = process.env[\"ANTHROPIC_API_KEY\"];\n if (!apiKey) {\n throw new Error(\"ANTHROPIC_API_KEY environment variable is not set\");\n }\n const Anthropic = await import(\"@anthropic-ai/sdk\").then(\n (m) => m.default ?? m,\n );\n const client = new Anthropic({ apiKey });\n const response = await client.messages.create({\n model,\n max_tokens: 8192,\n system: systemPrompt,\n messages: messages.map((m) => ({\n role: m.role,\n content: m.content,\n })),\n });\n const block = response.content[0];\n if (!block \|\| block.type !== \"text\") {\n throw new Error(\"Anthropic returned no text content\");\n }\n return block.text;\n },\n };\n}\n\nfunction createOpenAiAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const apiKey = process.env[\"OPENAI_API_KEY\"];\n if (!apiKey) {\n throw new Error(\"OPENAI_API_KEY environment variable is not set\");\n }\n const body = {\n model,\n messages: [\n { role: \"system\", content: systemPrompt },\n ...messages.map((m) => ({ role: m.role, content: m.content })),\n ],\n };\n const response = await fetch(\n \"https://api.openai.com/v1/chat/completions\",\n {\n method: \"POST\",\n headers: {\n \"Content-Type\": \"application/json\",\n Authorization: `Bearer ${apiKey}`,\n },\n body: JSON.stringify(body),\n },\n );\n if (!response.ok) {\n const text = await response.text();\n throw new Error(`OpenAI API error: HTTP ${response.status} — ${text}`);\n }\n const data = (await response.json()) as {\n choices: Array<{ message: { content: string } }>;\n };\n const content = data.choices[0]?.message?.content;\n if (!content) {\n throw new Error(\"OpenAI returned no content\");\n }\n return content;\n },\n };\n}\n\nfunction createOllamaAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const baseUrl =\n process.env[\"OLLAMA_BASE_URL\"] ?? \"http://localhost:11434\";\n const body = {\n model,\n messages: [\n { role: \"system\", content: systemPrompt },\n ...messages.map((m) => ({ role: m.role, content: m.content })),\n ],\n stream: false,\n };\n const response = await fetch(`${baseUrl}/api/chat`, {\n method: \"POST\",\n headers: { \"Content-Type\": \"application/json\" },\n body: JSON.stringify(body),\n });\n if (!response.ok) {\n const text = await response.text();\n throw new Error(`Ollama API error: HTTP ${response.status} — ${text}`);\n }\n const data = (await response.json()) as {\n message?: { content: string };\n };\n const content = data.message?.content;\n if (!content) {\n throw new Error(\"Ollama returned no content\");\n }\n return content;\n },\n };\n}\n\nexport function createLlmAdapter(config: KbConfig): LlmAdapter {\n const { provider, model } = config.llm;\n switch (provider) {\n case \"anthropic\":\n return createAnthropicAdapter(model);\n case \"openai\":\n return createOpenAiAdapter(model);\n case \"ollama\":\n return createOllamaAdapter(model);\n default: {\n const _exhaustive: never = provider;\n throw new Error(`Unsupported LLM provider: ${String(_exhaustive)}`);\n }\n }\n}\n","import { readFile, writeFile, mkdir, appendFile } from \"node:fs/promises\";\nimport { join, dirname, resolve } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport type { LlmAdapter } from \"./llm.js\";\nimport type { IngestResult } from \"./ingest-types.js\";\nimport { readSource } from \"./source-reader.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport interface IngestOptions {\n apply?: boolean;\n batch?: boolean;\n}\n\nexport interface IngestPlan {\n result: IngestResult;\n sourceFile: string;\n dryRun: boolean;\n}\n\nconst SYSTEM_PROMPT = `You are an AI assistant maintaining a knowledge base wiki.\nYou will be given a new source document and the current state of the wiki.\nYour task is to integrate the new knowledge into the wiki.\n\nReturn ONLY a JSON object matching this exact schema (no markdown fences):\n{\n \"summary\": { \"path\": \"wiki/sources/<filename>-summary.md\", \"content\": \"...\" },\n \"updates\": [{ \"path\": \"...\", \"content\": \"...\", \"reason\": \"...\" }],\n \"newPages\": [{ \"path\": \"...\", \"content\": \"...\", \"reason\": \"...\" }],\n \"indexUpdate\": \"...\",\n \"logEntry\": \"...\"\n}`;\n\nfunction assertWithinRoot(absPath: string, root: string): void {\n const resolvedPath = resolve(absPath);\n const resolvedRoot = resolve(root) + \"/\";\n if (!resolvedPath.startsWith(resolvedRoot)) {\n throw new Error(\n `Unsafe path rejected: \"${absPath}\" is outside project root`,\n );\n }\n}\n\nasync function readFileSafe(filePath: string): Promise<string> {\n try {\n return await readFile(filePath, \"utf8\");\n } catch {\n return \"\";\n }\n}\n\nfunction parseIngestResult(raw: string): IngestResult {\n const cleaned = raw\n .replace(/^```(?:json)?\\s/i, \"\")\n .replace(/\\s```\\s$/i, \"\")\n .trim();\n let parsed: unknown;\n try {\n parsed = JSON.parse(cleaned);\n } catch (err) {\n throw new Error(\n `Invalid LLM response: could not parse JSON. Raw response: ${cleaned.slice(0, 200)}`,\n );\n }\n\n if (parsed === null \|\| typeof parsed !== \"object\" \|\| Array.isArray(parsed)) {\n throw new Error(\"Invalid LLM response: expected a JSON object\");\n }\n\n const obj = parsed as Record<string, unknown>;\n\n if (\n !obj[\"summary\"] \|\|\n typeof obj[\"summary\"] !== \"object\" \|\|\n Array.isArray(obj[\"summary\"])\n ) {\n throw new Error('Invalid LLM response: missing \"summary\" object');\n }\n\n const summary = obj[\"summary\"] as Record<string, unknown>;\n if (\n typeof summary[\"path\"] !== \"string\" \|\|\n typeof summary[\"content\"] !== \"string\"\n ) {\n throw new Error(\n 'Invalid LLM response: \"summary\" must have \"path\" and \"content\" strings',\n );\n }\n\n if (!Array.isArray(obj[\"updates\"])) {\n throw new Error('Invalid LLM response: \"updates\" must be an array');\n }\n\n if (!Array.isArray(obj[\"newPages\"])) {\n throw new Error('Invalid LLM response: \"newPages\" must be an array');\n }\n\n if (typeof obj[\"indexUpdate\"] !== \"string\") {\n throw new Error('Invalid LLM response: \"indexUpdate\" must be a string');\n }\n\n if (typeof obj[\"logEntry\"] !== \"string\") {\n throw new Error('Invalid LLM response: \"logEntry\" must be a string');\n }\n\n const updates = (obj[\"updates\"] as unknown[]).map((u, i) => {\n if (typeof u !== \"object\" \|\| u === null \|\| Array.isArray(u)) {\n throw new Error(`Invalid LLM response: updates[${i}] must be an object`);\n }\n const update = u as Record<string, unknown>;\n if (\n typeof update[\"path\"] !== \"string\" \|\|\n typeof update[\"content\"] !== \"string\" \|\|\n typeof update[\"reason\"] !== \"string\"\n ) {\n throw new Error(\n `Invalid LLM response: updates[${i}] must have path, content, and reason strings`,\n );\n }\n return {\n path: update[\"path\"],\n content: update[\"content\"],\n reason: update[\"reason\"],\n };\n });\n\n const newPages = (obj[\"newPages\"] as unknown[]).map((p, i) => {\n if (typeof p !== \"object\" \|\| p === null \|\| Array.isArray(p)) {\n throw new Error(`Invalid LLM response: newPages[${i}] must be an object`);\n }\n const page = p as Record<string, unknown>;\n if (\n typeof page[\"path\"] !== \"string\" \|\|\n typeof page[\"content\"] !== \"string\" \|\|\n typeof page[\"reason\"] !== \"string\"\n ) {\n throw new Error(\n `Invalid LLM response: newPages[${i}] must have path, content, and reason strings`,\n );\n }\n return {\n path: page[\"path\"],\n content: page[\"content\"],\n reason: page[\"reason\"],\n };\n });\n\n return {\n summary: { path: summary[\"path\"], content: summary[\"content\"] },\n updates,\n newPages,\n indexUpdate: obj[\"indexUpdate\"] as string,\n logEntry: obj[\"logEntry\"] as string,\n };\n}\n\nasync function applyIngestResult(\n project: Project,\n result: IngestResult,\n sourceContent: string,\n sourceFilename: string,\n): Promise<void> {\n // Write summary\n const summaryAbsPath = join(project.root, result.summary.path);\n assertWithinRoot(summaryAbsPath, project.root);\n await mkdir(dirname(summaryAbsPath), { recursive: true });\n await writeFile(summaryAbsPath, result.summary.content, \"utf8\");\n\n // Write updated pages\n for (const update of result.updates) {\n const absPath = join(project.root, update.path);\n assertWithinRoot(absPath, project.root);\n await mkdir(dirname(absPath), { recursive: true });\n await writeFile(absPath, update.content, \"utf8\");\n }\n\n // Write new pages\n for (const newPage of result.newPages) {\n const absPath = join(project.root, newPage.path);\n assertWithinRoot(absPath, project.root);\n await mkdir(dirname(absPath), { recursive: true });\n await writeFile(absPath, newPage.content, \"utf8\");\n }\n\n // Update _index.md\n const indexPath = join(project.wikiDir, \"_index.md\");\n await writeFile(indexPath, result.indexUpdate, \"utf8\");\n\n // Write source file to sources directory\n const sourceDestPath = join(project.sourcesDir, sourceFilename);\n await mkdir(project.sourcesDir, { recursive: true });\n await writeFile(sourceDestPath, sourceContent, \"utf8\");\n\n // Append to log.md\n const logPath = join(project.wikiDir, \"log.md\");\n const timestamp = new Date().toISOString().split(\"T\")[0];\n const logLine = `- ${timestamp}: ${result.logEntry}\\n`;\n await appendFile(logPath, logLine, \"utf8\");\n\n // Re-index\n await indexProject(project);\n}\n\nexport async function ingestSource(\n project: Project,\n sourcePath: string,\n llm: LlmAdapter,\n options?: IngestOptions,\n): Promise<IngestPlan> {\n const apply = options?.apply ?? false;\n\n // 1. Read source content\n const sourceContent = await readSource(sourcePath);\n\n // 2. Read current wiki index\n const indexPath = join(project.wikiDir, \"_index.md\");\n const currentIndex = await readFileSafe(indexPath);\n\n // 3. Read schema\n const schemaPath = join(project.kbDir, \"schema.md\");\n const schema = await readFileSafe(schemaPath);\n\n // 4. Build user message\n const userMessage = `## Wiki Schema\n${schema}\n\n## Current Wiki Index\n${currentIndex}\n\n## New Source: ${sourceContent.filename}\n${sourceContent.content}\n\nIntegrate this source into the wiki following the schema above.`;\n\n // 5. Call LLM\n const raw = await llm.complete(\n [{ role: \"user\", content: userMessage }],\n SYSTEM_PROMPT,\n );\n\n // 6. Parse response\n const result = parseIngestResult(raw);\n\n // 7. Apply if requested\n if (apply) {\n await applyIngestResult(\n project,\n result,\n sourceContent.content,\n sourceContent.filename,\n );\n }\n\n const sourceFile = join(project.sourcesDir, sourceContent.filename);\n\n return {\n result,\n sourceFile,\n dryRun: !apply,\n };\n}\n","import { readFile, writeFile, mkdir, appendFile } from \"node:fs/promises\";\nimport { existsSync } from \"node:fs\";\nimport { join, dirname, resolve } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport type { LlmAdapter } from \"./llm.js\";\nimport { openDb, closeDb } from \"./db.js\";\nimport { searchWiki } from \"./search.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport interface QueryResult {\n answer: string;\n sources: string[];\n}\n\nexport interface QueryOptions {\n save?: string;\n}\n\nconst SYSTEM_PROMPT = `You are a knowledgeable assistant answering questions about a project's knowledge base.\nAnswer concisely using only information from the provided wiki pages.\nUse [[page-name]] wikilink syntax to cite specific wiki pages in your answer.\nFormat your answer in markdown.`;\n\nfunction assertWithinRoot(absPath: string, root: string): void {\n const resolvedPath = resolve(absPath);\n const resolvedRoot = resolve(root) + \"/\";\n if (!resolvedPath.startsWith(resolvedRoot)) {\n throw new Error(\n `Unsafe path rejected: \"${absPath}\" is outside project root`,\n );\n }\n}\n\nasync function readFileSafe(filePath: string): Promise<string> {\n try {\n return await readFile(filePath, \"utf8\");\n } catch {\n return \"\";\n }\n}\n\nexport async function queryWiki(\n project: Project,\n question: string,\n llm: LlmAdapter,\n options?: QueryOptions,\n): Promise<QueryResult> {\n // 1. Auto-index if db doesn't exist\n const dbPath = join(project.kbDir, \"index.db\");\n if (!existsSync(dbPath)) {\n await indexProject(project);\n }\n\n // 2. Search for top relevant pages\n const db = openDb(project);\n let searchResults;\n try {\n searchResults = searchWiki(db, question, project.name, { limit: 10 });\n } finally {\n closeDb(db);\n }\n\n // 3. Read full content of each result page\n const pages: Array<{ path: string; title: string; content: string }> = [];\n for (const result of searchResults) {\n const absPath = join(project.root, result.path);\n const content = await readFileSafe(absPath);\n if (content) {\n pages.push({ path: result.path, title: result.title, content });\n }\n }\n\n // 4. Build user message\n const pagesSection =\n pages.length > 0\n ? pages\n .map((p) => `### ${p.title} (${p.path})\\n${p.content}`)\n .join(\"\\n\\n\")\n : \"(No wiki pages found for this query.)\";\n\n const userMessage = `## Question\\n${question}\\n\\n## Relevant Wiki Pages\\n\\n${pagesSection}`;\n\n // 5. Call LLM\n const answer = await llm.complete(\n [{ role: \"user\", content: userMessage }],\n SYSTEM_PROMPT,\n );\n\n const sources = pages.map((p) => p.path);\n\n // 6. If save option provided, write answer as wiki page and append to log\n if (options?.save) {\n const saveRelPath = options.save;\n const saveAbsPath = join(project.root, saveRelPath);\n assertWithinRoot(saveAbsPath, project.root);\n\n await mkdir(dirname(saveAbsPath), { recursive: true });\n await writeFile(saveAbsPath, answer, \"utf8\");\n\n // Append to log.md\n const logPath = join(project.wikiDir, \"log.md\");\n const timestamp = new Date().toISOString().split(\"T\")[0];\n const logEntry = `\\n## ${timestamp} — Queried: ${question}\\n\\nSaved to: ${saveRelPath}\\n`;\n await appendFile(logPath, logEntry, \"utf8\");\n\n // Re-index so saved page is searchable\n await indexProject(project);\n }\n\n return { answer, sources };\n}\n","import { readdir, stat } from \"node:fs/promises\";\nimport { join, relative, basename, extname } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport { openDb, closeDb } from \"./db.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport type LintSeverity = \"warning\" \| \"info\";\n\nexport interface LintIssue {\n severity: LintSeverity;\n code: string;\n path: string;\n message: string;\n detail?: string;\n}\n\nexport interface LintResult {\n issues: LintIssue[];\n pagesChecked: number;\n sourcesChecked: number;\n}\n\ninterface PageMetaRow {\n path: string;\n outgoing_links: string;\n word_count: number;\n mtime: number;\n updated_at: number;\n}\n\nasync function collectMdFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile() && e.name.endsWith(\".md\"))\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\nasync function collectSourceFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile())\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\n/\n Build a set of \"keys\" for wiki pages for wikilink resolution.\n * A wikilink [[foo-bar]] can match:\n * - a page whose filename (without extension) is \"foo-bar\"\n * - a page whose relative path is \"foo-bar\" or \"foo-bar.md\"\n /\nfunction buildPageKeySet(\n relPaths: string[],\n projectRoot: string,\n wikiDir: string,\n): Set<string> {\n const keys = new Set<string>();\n for (const rp of relPaths) {\n // rp is relative to projectRoot, e.g. \"wiki/concepts/foo.md\"\n keys.add(rp);\n // without extension\n keys.add(rp.replace(/\\.md$/i, \"\"));\n // filename without extension\n const fname = basename(rp, \".md\");\n keys.add(fname);\n // relative path from wikiDir\n const absPath = join(projectRoot, rp);\n const relToWiki = relative(wikiDir, absPath);\n keys.add(relToWiki);\n keys.add(relToWiki.replace(/\\.md$/i, \"\"));\n }\n return keys;\n}\n\nexport async function lintProject(project: Project): Promise<LintResult> {\n // Ensure index is up to date\n await indexProject(project);\n\n const issues: LintIssue[] = [];\n\n // Collect all wiki md files\n const absWikiFiles = await collectMdFiles(project.wikiDir);\n const relWikiPaths = absWikiFiles.map((f) => relative(project.root, f));\n\n const pagesChecked = relWikiPaths.length;\n\n // Always collect source files so sourcesChecked is accurate\n const sourceFiles = await collectSourceFiles(project.sourcesDir);\n const sourcesChecked = sourceFiles.filter(\n (f) => basename(f) !== \".gitkeep\",\n ).length;\n\n if (pagesChecked === 0) {\n return { issues, pagesChecked: 0, sourcesChecked };\n }\n\n // Build page key set for wikilink resolution\n const pageKeySet = buildPageKeySet(\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n\n // Query all page_meta rows\n const db = openDb(project);\n let rows: PageMetaRow[];\n try {\n rows = db\n .prepare<\n [],\n PageMetaRow\n >(\"SELECT path, outgoing_links, word_count, mtime, updated_at FROM page_meta\")\n .all();\n } finally {\n closeDb(db);\n }\n\n // Build a map from path -> row for quick lookup\n const metaMap = new Map<string, PageMetaRow>();\n for (const row of rows) {\n metaMap.set(row.path, row);\n }\n\n // Build inbound link map\n const inboundLinks = new Map<string, Set<string>>();\n for (const rp of relWikiPaths) {\n inboundLinks.set(rp, new Set());\n }\n\n for (const row of rows) {\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n // Find which page this link resolves to\n const resolved = resolveLink(\n link,\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n if (resolved !== null) {\n const set = inboundLinks.get(resolved);\n if (set) {\n set.add(row.path);\n }\n }\n }\n }\n\n // Read _index.md outgoing links for MISSING_INDEX check\n const indexPath = relWikiPaths.find((p) => basename(p) === \"_index.md\");\n let indexLinks: Set<string> = new Set();\n if (indexPath) {\n const indexRow = metaMap.get(indexPath);\n if (indexRow) {\n let links: string[] = [];\n try {\n links = JSON.parse(indexRow.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n const resolved = resolveLink(\n link,\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n if (resolved !== null) {\n indexLinks.add(resolved);\n }\n }\n }\n }\n\n // --- CHECK 1: ORPHAN_PAGE ---\n for (const rp of relWikiPaths) {\n if (basename(rp) === \"_index.md\") continue;\n const inbound = inboundLinks.get(rp);\n if (!inbound \|\| inbound.size === 0) {\n issues.push({\n severity: \"warning\",\n code: \"ORPHAN_PAGE\",\n path: rp,\n message: \"Orphan page (no inbound links)\",\n });\n }\n }\n\n // --- CHECK 2: BROKEN_LINK ---\n for (const row of rows) {\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } 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1	+ {"version":3,"sources":["../src/init.ts","../src/config.ts","../src/project.ts","../src/db.ts","../src/markdown.ts","../src/indexer.ts","../src/search.ts","../src/source-reader.ts","../src/llm.ts","../src/ingest.ts","../src/query.ts","../src/lint.ts","../src/log-parser.ts","../src/index.ts"],"sourcesContent":["import { mkdir, writeFile, access, rm } from \"node:fs/promises\";\nimport { join, basename } from \"node:path\";\nimport TOML from \"@iarna/toml\";\n\nexport interface InitOptions {\n name: string;\n directory: string; // absolute path where to init\n}\n\nfunction resolveProjectName(options: InitOptions): string {\n return options.name \|\| basename(options.directory);\n}\n\nfunction buildConfigToml(projectName: string): string {\n const config = {\n project: {\n name: projectName,\n version: \"0.1.0\",\n },\n directories: {\n sources: \"sources\",\n wiki: \"wiki\",\n },\n llm: {\n provider: \"anthropic\",\n model: \"claude-sonnet-4-20250514\",\n },\n };\n\n const tomlStr = TOML.stringify(config as TOML.JsonMap);\n return (\n tomlStr +\n '\\n[dependencies]\\n# shared-glossary = { path = \"../shared-glossary\" }\\n'\n );\n}\n\nfunction buildSchemaMd(): string {\n return `# KB Schema — LLM Instructions\n\nThis file defines the conventions for this knowledge base. The \\`kb\\` CLI and any\nLLM operating on this wiki MUST follow these rules.\n\n---\n\n## Wiki Structure Conventions\n\n- All pages live under the \\`wiki/\\` directory.\n- \\`wiki/_index.md\\` is the wiki root and serves as a table of contents.\n- Sub-topics may be organised into sub-directories: \\`wiki/<topic>/_index.md\\`.\n- File names use kebab-case, e.g. \\`wiki/authentication-flow.md\\`.\n- Every page must have a valid YAML frontmatter block.\n\n---\n\n## Frontmatter Schema\n\nEvery wiki page must begin with a YAML frontmatter block:\n\n\\`\\`\\`yaml\n---\ntitle: <Human-readable page title>\ntags: [tag1, tag2] # optional; array of lowercase strings\ncreated: <ISO 8601 date> # e.g. 2026-04-05\nupdated: <ISO 8601 date> # updated whenever content changes\nsource: <path or URL> # optional; original source material\n---\n\\`\\`\\`\n\nRequired fields: \\`title\\`, \\`created\\`.\n\n---\n\n## Page Templates\n\n### Entity Page\nUse for: people, systems, services, tools.\n\n\\`\\`\\`markdown\n---\ntitle: <Entity Name>\ntags: [entity]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# <Entity Name>\n\nType: <system \| person \| service \| tool>\n\n## Overview\n\n<One-paragraph description.>\n\n## Key Attributes\n\n- Attribute: value\n\n## Related\n\n- [[related-page]]\n\\`\\`\\`\n\n### Concept Page\nUse for: ideas, patterns, terminology.\n\n\\`\\`\\`markdown\n---\ntitle: <Concept Name>\ntags: [concept]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# <Concept Name>\n\n## Definition\n\n<Clear definition in 1-3 sentences.>\n\n## Context\n\n<When and why this concept matters in the project.>\n\n## See Also\n\n- [[related-concept]]\n\\`\\`\\`\n\n### Source Summary Page\nUse for: summarised source material (docs, papers, meetings).\n\n\\`\\`\\`markdown\n---\ntitle: Summary — <Source Title>\ntags: [source-summary]\ncreated: <ISO date>\nsource: <path or URL>\n---\n\n# Summary — <Source Title>\n\n## Key Points\n\n- Point one\n- Point two\n\n## Decisions / Implications\n\n<What this source means for the project.>\n\n## Raw Source\n\nSee \\`sources/<filename>\\`.\n\\`\\`\\`\n\n### Comparison Page\nUse for: side-by-side evaluation of options.\n\n\\`\\`\\`markdown\n---\ntitle: Comparison — <Topic>\ntags: [comparison]\ncreated: <ISO date>\nupdated: <ISO date>\n---\n\n# Comparison — <Topic>\n\n\| Criterion \| Option A \| Option B \|\n\|-----------\|----------\|----------\|\n\| ... \| ... \| ... \|\n\n## Recommendation\n\n<Which option and why.>\n\\`\\`\\`\n\n---\n\n## Wikilink Conventions\n\n- Basic link: \\`[[page-name]]\\` — links to \\`wiki/page-name.md\\`.\n- Display text: \\`[[page-name\|display text]]\\` — renders as \"display text\".\n- Cross-directory: \\`[[topic/sub-page]]\\`.\n- All wikilink targets must be lowercase kebab-case matching the file name without \\`.md\\`.\n\n---\n\n## Ingest Workflow\n\n1. Place the source file in \\`sources/\\` (PDF, Markdown, plain text, etc.).\n2. Run \\`kb ingest sources/<filename>\\`.\n3. The CLI reads the file, calls the configured LLM, and generates a source-summary\n page in \\`wiki/\\`.\n4. The summary page is linked from \\`wiki/_index.md\\` under Sources.\n5. An entry is appended to \\`log.md\\`.\n\n---\n\n## Query Workflow\n\n1. Run \\`kb query \"<natural-language question>\"\\`.\n2. The CLI searches the wiki index for relevant pages.\n3. Relevant page content is assembled into a prompt context.\n4. The LLM answers the question, citing wikilinks.\n5. The answer is printed to stdout. Nothing is written to disk unless \\`--save\\` is passed.\n\n---\n\n## Lint Workflow\n\nRun \\`kb lint\\` to check for:\n\n- Pages missing required frontmatter fields (\\`title\\`, \\`created\\`).\n- Broken wikilinks (targets that don't resolve to an existing page).\n- Pages not reachable from \\`wiki/_index.md\\`.\n- Duplicate page titles across the wiki.\n- Frontmatter fields with invalid types or formats.\n\nLint exits with code 0 on success, 1 if errors are found.\n`;\n}\n\nfunction buildIndexMd(projectName: string, isoDate: string): string {\n return `---\ntitle: ${projectName} Knowledge Base\ncreated: ${isoDate}\n---\n\n# ${projectName} Knowledge Base\n\n> This wiki is maintained by the \\`kb\\` CLI tool.\n\n## Pages\n\n(No pages yet. 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{ path: dep[\"path\"] } : {}),\n ...(typeof dep[\"git\"] === \"string\" ? { git: dep[\"git\"] } : {}),\n ...(typeof dep[\"branch\"] === \"string\"\n ? { branch: dep[\"branch\"] }\n : {}),\n ...(typeof dep[\"mode\"] === \"string\" ? { mode: dep[\"mode\"] } : {}),\n };\n }\n }\n }\n\n return {\n project: { name, version },\n directories: { sources, wiki },\n llm: { provider, model },\n dependencies,\n };\n}\n","import { access } from \"node:fs/promises\";\nimport { join, dirname, resolve } from \"node:path\";\nimport { parseConfig, type KbConfig } from \"./config.js\";\n\nexport interface Project {\n name: string;\n root: string;\n kbDir: string;\n sourcesDir: string;\n wikiDir: string;\n config: KbConfig;\n}\n\nasync function hasKbDir(dir: string): Promise<boolean> {\n try {\n await access(join(dir, \".kb\", \"config.toml\"));\n return true;\n } catch {\n return false;\n }\n}\n\nasync function findProjectRoot(startDir: string): Promise<string \| null> {\n let current = resolve(startDir);\n\n while (true) {\n if (await hasKbDir(current)) {\n return current;\n }\n const parent = dirname(current);\n if (parent === current) {\n // Reached filesystem root\n return null;\n }\n current = parent;\n }\n}\n\nexport async function loadProject(startDir: string): Promise<Project> {\n const root = await findProjectRoot(startDir);\n if (root === null) {\n throw new Error(\n `No kb project found. Run \"kb init\" to initialize a knowledge base in the current directory.`,\n );\n }\n\n const kbDir = join(root, \".kb\");\n const configPath = join(kbDir, \"config.toml\");\n const config = await parseConfig(configPath);\n\n return {\n name: config.project.name,\n root,\n kbDir,\n sourcesDir: join(root, config.directories.sources),\n wikiDir: join(root, config.directories.wiki),\n config,\n };\n}\n\nexport async function tryLoadProject(\n startDir: string,\n): Promise<Project \| null> {\n try {\n return await loadProject(startDir);\n } catch (err: unknown) {\n if (err instanceof Error && /no kb project found/i.test(err.message)) {\n return null;\n }\n throw err;\n }\n}\n","import Database from \"better-sqlite3\";\nimport { join } from \"node:path\";\nimport type { Project } from \"./project.js\";\n\nconst SCHEMA_SQL = `\nCREATE VIRTUAL TABLE IF NOT EXISTS pages USING fts5(\n path,\n title,\n content,\n tags,\n project,\n tokenize='porter unicode61'\n);\n\nCREATE TABLE IF NOT EXISTS page_meta (\n path TEXT PRIMARY KEY,\n sha256 TEXT NOT NULL,\n mtime INTEGER NOT NULL,\n word_count INTEGER NOT NULL DEFAULT 0,\n frontmatter TEXT NOT NULL DEFAULT '{}',\n outgoing_links TEXT NOT NULL DEFAULT '[]',\n updated_at INTEGER NOT NULL\n);\n`;\n\nexport function openDb(project: Project): Database.Database {\n const dbPath = join(project.kbDir, \"index.db\");\n const db = new Database(dbPath);\n db.pragma(\"journal_mode = WAL\");\n db.exec(SCHEMA_SQL);\n return db;\n}\n\nexport function closeDb(db: Database.Database): void {\n db.close();\n}\n","import { readFile } from \"node:fs/promises\";\nimport matter from \"gray-matter\";\n\nexport interface ParsedPage {\n path: string;\n title: string;\n content: string;\n tags: string;\n frontmatter: Record<string, unknown>;\n outgoingLinks: string[];\n wordCount: number;\n}\n\nconst WIKILINK_RE = /\\[\\[([^\\]\|]+)(?:\\\|[^\\]]+)?\\]\\]/g;\nconst H1_RE = /^#\\s+(.+)$/m;\n\nfunction extractTitle(\n fm: Record<string, unknown>,\n content: string,\n relativePath: string,\n): string {\n if (typeof fm[\"title\"] === \"string\" && fm[\"title\"].trim() !== \"\") {\n return fm[\"title\"].trim();\n }\n const h1Match = H1_RE.exec(content);\n if (h1Match) {\n return h1Match[1]!.trim();\n }\n // Fallback: use filename without extension\n const filename = relativePath.split(\"/\").pop() ?? relativePath;\n return filename.replace(/\\.md$/i, \"\");\n}\n\nfunction extractTags(fm: Record<string, unknown>): string {\n const tags = fm[\"tags\"];\n if (!Array.isArray(tags)) return \"\";\n return tags.filter((t): t is string => typeof t === \"string\").join(\",\");\n}\n\nfunction extractWikiLinks(content: string): string[] {\n const links: string[] = [];\n let match: RegExpExecArray \| null;\n const re = new RegExp(WIKILINK_RE.source, \"g\");\n while ((match = re.exec(content)) !== null) {\n links.push(match[1]!.trim());\n }\n return links;\n}\n\nfunction countWords(text: string): number {\n const trimmed = text.trim();\n if (trimmed === \"\") return 0;\n return trimmed.split(/\\s+/).length;\n}\n\nexport async function parsePage(\n filePath: string,\n relativePath: string,\n rawContent?: string,\n): Promise<ParsedPage> {\n const raw = rawContent ?? (await readFile(filePath, \"utf8\"));\n const parsed = matter(raw);\n const fm = parsed.data as Record<string, unknown>;\n const content = parsed.content;\n\n const title = extractTitle(fm, content, relativePath);\n const tags = extractTags(fm);\n const outgoingLinks = extractWikiLinks(content);\n const wordCount = countWords(content);\n\n return {\n path: relativePath,\n title,\n content,\n tags,\n frontmatter: fm,\n outgoingLinks,\n wordCount,\n };\n}\n","import { createHash } from \"node:crypto\";\nimport { readFile, stat, readdir } from \"node:fs/promises\";\nimport { join, relative } from \"node:path\";\nimport Database from \"better-sqlite3\";\nimport type { Project } from \"./project.js\";\nimport { parsePage } from \"./markdown.js\";\nimport { openDb, closeDb } from \"./db.js\";\n\nexport interface IndexStats {\n indexed: number;\n skipped: number;\n deleted: number;\n errors: number;\n}\n\nasync function collectMdFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile() && e.name.endsWith(\".md\"))\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\nfunction sha256(content: string): string {\n return createHash(\"sha256\").update(content).digest(\"hex\");\n}\n\ninterface PageMetaRow {\n sha256: string;\n}\n\ninterface UpsertStmts {\n deletePages: Database.Statement;\n insertPage: Database.Statement;\n upsertMeta: Database.Statement;\n}\n\nfunction upsertParsedPage(\n stmts: UpsertStmts,\n project: Project,\n page: Awaited<ReturnType<typeof parsePage>>,\n hash: string,\n mtime: number,\n): void {\n stmts.deletePages.run(page.path);\n stmts.insertPage.run(\n page.path,\n page.title,\n page.content,\n page.tags,\n project.name,\n );\n stmts.upsertMeta.run(\n page.path,\n hash,\n mtime,\n page.wordCount,\n JSON.stringify(page.frontmatter),\n JSON.stringify(page.outgoingLinks),\n Date.now(),\n );\n}\n\nexport async function indexProject(\n project: Project,\n rebuild = false,\n): Promise<IndexStats> {\n const db = openDb(project);\n try {\n if (rebuild) {\n db.exec(\"DELETE FROM pages; DELETE FROM page_meta;\");\n }\n\n const files = await collectMdFiles(project.wikiDir);\n const stats: IndexStats = { indexed: 0, skipped: 0, deleted: 0, errors: 0 };\n\n const getMetaStmt = db.prepare<[string], PageMetaRow>(\n \"SELECT sha256 FROM page_meta WHERE path = ?\",\n );\n\n const upsertStmts: UpsertStmts = {\n deletePages: db.prepare(\"DELETE FROM pages WHERE path = ?\"),\n insertPage: db.prepare(\n \"INSERT INTO pages(path, title, content, tags, project) VALUES (?, ?, ?, ?, ?)\",\n ),\n upsertMeta: db.prepare(`\n INSERT INTO page_meta(path, sha256, mtime, word_count, frontmatter, outgoing_links, updated_at)\n VALUES (?, ?, ?, ?, ?, ?, ?)\n ON CONFLICT(path) DO UPDATE SET\n sha256 = excluded.sha256,\n mtime = excluded.mtime,\n word_count = excluded.word_count,\n frontmatter = excluded.frontmatter,\n outgoing_links = excluded.outgoing_links,\n updated_at = excluded.updated_at\n `),\n };\n\n const deleteStalePages = db.prepare(\"DELETE FROM pages WHERE path = ?\");\n const deleteStaleMeta = db.prepare(\"DELETE FROM page_meta WHERE path = ?\");\n const listMetaStmt = db.prepare<[], { path: string }>(\n \"SELECT path FROM page_meta\",\n );\n\n const processFile = db.transaction(\n (\n page: Awaited<ReturnType<typeof parsePage>>,\n hash: string,\n mtime: number,\n ) => {\n upsertParsedPage(upsertStmts, project, page, hash, mtime);\n },\n );\n\n const onDiskPaths = new Set<string>();\n\n for (const absPath of files) {\n const relPath = relative(project.root, absPath);\n onDiskPaths.add(relPath);\n\n let raw: string;\n try {\n raw = await readFile(absPath, \"utf8\");\n } catch (err) {\n stats.errors++;\n continue;\n }\n\n const hash = sha256(raw);\n const existing = getMetaStmt.get(relPath);\n\n if (existing && existing.sha256 === hash) {\n stats.skipped++;\n continue;\n }\n\n let fileStat: Awaited<ReturnType<typeof stat>>;\n try {\n fileStat = await stat(absPath);\n } catch {\n stats.errors++;\n continue;\n }\n\n let page: Awaited<ReturnType<typeof parsePage>>;\n try {\n page = await parsePage(absPath, relPath, raw);\n } catch {\n stats.errors++;\n continue;\n }\n\n try {\n processFile(page, hash, Math.floor(fileStat.mtimeMs));\n stats.indexed++;\n } catch {\n stats.errors++;\n }\n }\n\n // Remove entries for deleted files\n const allMetaPaths = listMetaStmt.all().map((r) => r.path);\n\n const stalePaths = allMetaPaths.filter((p) => !onDiskPaths.has(p));\n\n const deleteStale = db.transaction((paths: string[]) => {\n for (const p of paths) {\n deleteStalePages.run(p);\n deleteStaleMeta.run(p);\n }\n });\n\n deleteStale(stalePaths);\n stats.deleted += stalePaths.length;\n\n return stats;\n } finally {\n closeDb(db);\n }\n}\n","import Database from \"better-sqlite3\";\n\nexport interface SearchResult {\n rank: number;\n path: string;\n title: string;\n snippet: string;\n tags: string[];\n}\n\nexport interface SearchOptions {\n limit?: number;\n tags?: string[];\n}\n\ninterface FtsRow {\n path: string;\n title: string;\n tags: string;\n rank: number;\n snippet: string;\n}\n\nfunction sanitizeFtsQuery(query: string): string {\n // Split into tokens, quote each one to escape special FTS5 chars.\n // Using individual quoted tokens (AND logic) instead of a single phrase\n // so non-adjacent words still match.\n const tokens = query\n .trim()\n .split(/\\s+/)\n .filter((t) => t.length > 0);\n if (tokens.length === 0) return '\"\"';\n return tokens.map((t) => `\"${t.replace(/\"/g, '\"\"')}\"`).join(\" \");\n}\n\nfunction parseTags(raw: string): string[] {\n if (!raw \|\| raw.trim() === \"\") return [];\n return raw\n .split(\",\")\n .map((t) => t.trim())\n .filter((t) => t.length > 0);\n}\n\nexport function searchWiki(\n db: Database.Database,\n query: string,\n projectName: string,\n options?: SearchOptions,\n): SearchResult[] {\n if (!query \|\| query.trim() === \"\") {\n return [];\n }\n\n const limit = options?.limit ?? 10;\n const ftsQuery = sanitizeFtsQuery(query.trim());\n\n // Build dynamic tag WHERE clauses so filtering happens in SQL\n const filterTags = options?.tags?.length\n ? options.tags\n .map((t) => t.trim().toLowerCase())\n .filter((t) => t.length > 0)\n : [];\n\n const tagClauses = filterTags.map(() => \"AND lower(tags) LIKE ?\").join(\" \");\n const tagParams = filterTags.map((t) => `%${t}%`);\n\n const stmt = db.prepare<[string, string, ...string[], number], FtsRow>(`\n SELECT path, title, tags, bm25(pages) as rank,\n snippet(pages, 2, '', '', '...', 8) as snippet\n FROM pages\n WHERE pages MATCH ? AND project = ?\n ${tagClauses}\n ORDER BY rank\n LIMIT ?\n `);\n\n const rows = stmt.all(ftsQuery, projectName, ...tagParams, limit);\n\n const results: SearchResult[] = rows.map((row) => ({\n rank: row.rank,\n path: row.path,\n title: row.title,\n snippet: row.snippet,\n tags: parseTags(row.tags),\n }));\n\n return results;\n}\n","import { readFile } from \"node:fs/promises\";\nimport { basename, extname } from \"node:path\";\n\nexport type SourceType = \"markdown\" \| \"text\" \| \"pdf\" \| \"url\";\n\nexport interface SourceContent {\n type: SourceType;\n originalPath: string;\n content: string;\n filename: string;\n}\n\nfunction sanitizeFilename(name: string): string {\n return name.toLowerCase().replace(/\\s/g, \"-\");\n}\n\nfunction detectType(sourcePath: string): SourceType {\n if (sourcePath.startsWith(\"http://\") \|\| sourcePath.startsWith(\"https://\")) {\n return \"url\";\n }\n const ext = extname(sourcePath).toLowerCase();\n if (ext === \".pdf\") return \"pdf\";\n if (ext === \".md\") return \"markdown\";\n return \"text\";\n}\n\nfunction filenameFromUrl(url: string): string {\n try {\n const parsed = new URL(url);\n const parts = parsed.pathname.split(\"/\").filter(Boolean);\n const last = parts[parts.length - 1];\n const pagePart = last\n ? last.includes(\".\")\n ? last\n : `${last}.html`\n : \"index.html\";\n return sanitizeFilename(`${parsed.hostname}-${pagePart}`);\n } catch {\n return \"url-content.html\";\n }\n}\n\nfunction stripHtml(html: string): string {\n // Remove script and style blocks entirely\n let text = html.replace(/<script[\\s\\S]?<\\/script>/gi, \" \");\n text = text.replace(/<style[\\s\\S]?<\\/style>/gi, \" \");\n // Strip remaining tags\n text = text.replace(/<[^>]+>/g, \" \");\n // Decode common HTML entities\n text = text\n .replace(/&/gi, \"&\")\n .replace(/</gi, \"<\")\n .replace(/>/gi, \">\")\n .replace(/"/gi, '\"')\n .replace(/'/gi, \"'\")\n .replace(/ /gi, \" \");\n // Collapse whitespace\n text = text.replace(/\\s+/g, \" \").trim();\n return text;\n}\n\nasync function readPdf(filePath: string): Promise<string> {\n const pdfParse: (buf: Buffer) => Promise<{ text: string }> =\n await import(\"pdf-parse\")\n .then((m) => m.default ?? m)\n .catch(() => {\n throw new Error(\n \"PDF support requires pdf-parse: run `npm install pdf-parse` in your project\",\n );\n });\n const buffer = await readFile(filePath);\n const data = await pdfParse(buffer);\n return data.text;\n}\n\nfunction isPrivateUrl(url: string): boolean {\n try {\n const { hostname } = new URL(url);\n return (\n hostname === \"localhost\" \|\|\n hostname === \"127.0.0.1\" \|\|\n hostname === \"::1\" \|\|\n hostname.startsWith(\"169.254.\") \|\| // link-local\n hostname.startsWith(\"10.\") \|\|\n hostname.startsWith(\"192.168.\") \|\|\n /^172\\.(1[6-9]\|2\\d\|3[01])\\./.test(hostname)\n );\n } catch {\n return false;\n }\n}\n\nasync function fetchUrl(url: string): Promise<string> {\n if (isPrivateUrl(url)) {\n throw new Error(`Fetching private/localhost URLs is not allowed: ${url}`);\n }\n const response = await fetch(url);\n if (!response.ok) {\n throw new Error(\n `Failed to fetch URL ${url}: HTTP ${response.status} ${response.statusText}`,\n );\n }\n const html = await response.text();\n return stripHtml(html);\n}\n\nexport async function readSource(sourcePath: string): Promise<SourceContent> {\n const type = detectType(sourcePath);\n\n if (type === \"url\") {\n const content = await fetchUrl(sourcePath);\n const filename = filenameFromUrl(sourcePath);\n return { type, originalPath: sourcePath, content, filename };\n }\n\n if (type === \"pdf\") {\n const content = await readPdf(sourcePath);\n const raw = basename(sourcePath);\n const filename = sanitizeFilename(raw);\n return { type, originalPath: sourcePath, content, filename };\n }\n\n // markdown or text\n const content = await readFile(sourcePath, \"utf8\");\n const raw = basename(sourcePath);\n const filename = sanitizeFilename(raw);\n return { type, originalPath: sourcePath, content, filename };\n}\n","import type { KbConfig } from \"./config.js\";\n\nexport interface LlmMessage {\n role: \"user\" \| \"assistant\";\n content: string;\n}\n\nexport interface LlmAdapter {\n complete(messages: LlmMessage[], systemPrompt: string): Promise<string>;\n}\n\nfunction createAnthropicAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const apiKey = process.env[\"ANTHROPIC_API_KEY\"];\n if (!apiKey) {\n throw new Error(\"ANTHROPIC_API_KEY environment variable is not set\");\n }\n const Anthropic = await import(\"@anthropic-ai/sdk\").then(\n (m) => m.default ?? m,\n );\n const client = new Anthropic({ apiKey });\n const response = await client.messages.create({\n model,\n max_tokens: 8192,\n system: systemPrompt,\n messages: messages.map((m) => ({\n role: m.role,\n content: m.content,\n })),\n });\n const block = response.content[0];\n if (!block \|\| block.type !== \"text\") {\n throw new Error(\"Anthropic returned no text content\");\n }\n return block.text;\n },\n };\n}\n\nfunction createOpenAiAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const apiKey = process.env[\"OPENAI_API_KEY\"];\n if (!apiKey) {\n throw new Error(\"OPENAI_API_KEY environment variable is not set\");\n }\n const body = {\n model,\n messages: [\n { role: \"system\", content: systemPrompt },\n ...messages.map((m) => ({ role: m.role, content: m.content })),\n ],\n };\n const response = await fetch(\n \"https://api.openai.com/v1/chat/completions\",\n {\n method: \"POST\",\n headers: {\n \"Content-Type\": \"application/json\",\n Authorization: `Bearer ${apiKey}`,\n },\n body: JSON.stringify(body),\n },\n );\n if (!response.ok) {\n const text = await response.text();\n throw new Error(`OpenAI API error: HTTP ${response.status} — ${text}`);\n }\n const data = (await response.json()) as {\n choices: Array<{ message: { content: string } }>;\n };\n const content = data.choices[0]?.message?.content;\n if (!content) {\n throw new Error(\"OpenAI returned no content\");\n }\n return content;\n },\n };\n}\n\nfunction createOllamaAdapter(model: string): LlmAdapter {\n return {\n async complete(messages, systemPrompt) {\n const baseUrl =\n process.env[\"OLLAMA_BASE_URL\"] ?? \"http://localhost:11434\";\n const body = {\n model,\n messages: [\n { role: \"system\", content: systemPrompt },\n ...messages.map((m) => ({ role: m.role, content: m.content })),\n ],\n stream: false,\n };\n const response = await fetch(`${baseUrl}/api/chat`, {\n method: \"POST\",\n headers: { \"Content-Type\": \"application/json\" },\n body: JSON.stringify(body),\n });\n if (!response.ok) {\n const text = await response.text();\n throw new Error(`Ollama API error: HTTP ${response.status} — ${text}`);\n }\n const data = (await response.json()) as {\n message?: { content: string };\n };\n const content = data.message?.content;\n if (!content) {\n throw new Error(\"Ollama returned no content\");\n }\n return content;\n },\n };\n}\n\nexport function createLlmAdapter(config: KbConfig): LlmAdapter {\n const { provider, model } = config.llm;\n switch (provider) {\n case \"anthropic\":\n return createAnthropicAdapter(model);\n case \"openai\":\n return createOpenAiAdapter(model);\n case \"ollama\":\n return createOllamaAdapter(model);\n default: {\n const _exhaustive: never = provider;\n throw new Error(`Unsupported LLM provider: ${String(_exhaustive)}`);\n }\n }\n}\n","import { readFile, writeFile, mkdir, appendFile } from \"node:fs/promises\";\nimport { join, dirname, resolve } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport type { LlmAdapter } from \"./llm.js\";\nimport type { IngestResult } from \"./ingest-types.js\";\nimport { readSource } from \"./source-reader.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport interface IngestOptions {\n apply?: boolean;\n batch?: boolean;\n}\n\nexport interface IngestPlan {\n result: IngestResult;\n sourceFile: string;\n dryRun: boolean;\n}\n\nconst SYSTEM_PROMPT = `You are an AI assistant maintaining a knowledge base wiki.\nYou will be given a new source document and the current state of the wiki.\nYour task is to integrate the new knowledge into the wiki.\n\nReturn ONLY a JSON object matching this exact schema (no markdown fences):\n{\n \"summary\": { \"path\": \"wiki/sources/<filename>-summary.md\", \"content\": \"...\" },\n \"updates\": [{ \"path\": \"...\", \"content\": \"...\", \"reason\": \"...\" }],\n \"newPages\": [{ \"path\": \"...\", \"content\": \"...\", \"reason\": \"...\" }],\n \"indexUpdate\": \"...\",\n \"logEntry\": \"...\"\n}`;\n\nfunction assertWithinRoot(absPath: string, root: string): void {\n const resolvedPath = resolve(absPath);\n const resolvedRoot = resolve(root) + \"/\";\n if (!resolvedPath.startsWith(resolvedRoot)) {\n throw new Error(\n `Unsafe path rejected: \"${absPath}\" is outside project root`,\n );\n }\n}\n\nasync function readFileSafe(filePath: string): Promise<string> {\n try {\n return await readFile(filePath, \"utf8\");\n } catch {\n return \"\";\n }\n}\n\nfunction parseIngestResult(raw: string): IngestResult {\n const cleaned = raw\n .replace(/^```(?:json)?\\s/i, \"\")\n .replace(/\\s```\\s$/i, \"\")\n .trim();\n let parsed: unknown;\n try {\n parsed = JSON.parse(cleaned);\n } catch (err) {\n throw new Error(\n `Invalid LLM response: could not parse JSON. Raw response: ${cleaned.slice(0, 200)}`,\n );\n }\n\n if (parsed === null \|\| typeof parsed !== \"object\" \|\| Array.isArray(parsed)) {\n throw new Error(\"Invalid LLM response: expected a JSON object\");\n }\n\n const obj = parsed as Record<string, unknown>;\n\n if (\n !obj[\"summary\"] \|\|\n typeof obj[\"summary\"] !== \"object\" \|\|\n Array.isArray(obj[\"summary\"])\n ) {\n throw new Error('Invalid LLM response: missing \"summary\" object');\n }\n\n const summary = obj[\"summary\"] as Record<string, unknown>;\n if (\n typeof summary[\"path\"] !== \"string\" \|\|\n typeof summary[\"content\"] !== \"string\"\n ) {\n throw new Error(\n 'Invalid LLM response: \"summary\" must have \"path\" and \"content\" strings',\n );\n }\n\n if (!Array.isArray(obj[\"updates\"])) {\n throw new Error('Invalid LLM response: \"updates\" must be an array');\n }\n\n if (!Array.isArray(obj[\"newPages\"])) {\n throw new Error('Invalid LLM response: \"newPages\" must be an array');\n }\n\n if (typeof obj[\"indexUpdate\"] !== \"string\") {\n throw new Error('Invalid LLM response: \"indexUpdate\" must be a string');\n }\n\n if (typeof obj[\"logEntry\"] !== \"string\") {\n throw new Error('Invalid LLM response: \"logEntry\" must be a string');\n }\n\n const updates = (obj[\"updates\"] as unknown[]).map((u, i) => {\n if (typeof u !== \"object\" \|\| u === null \|\| Array.isArray(u)) {\n throw new Error(`Invalid LLM response: updates[${i}] must be an object`);\n }\n const update = u as Record<string, unknown>;\n if (\n typeof update[\"path\"] !== \"string\" \|\|\n typeof update[\"content\"] !== \"string\" \|\|\n typeof update[\"reason\"] !== \"string\"\n ) {\n throw new Error(\n `Invalid LLM response: updates[${i}] must have path, content, and reason strings`,\n );\n }\n return {\n path: update[\"path\"],\n content: update[\"content\"],\n reason: update[\"reason\"],\n };\n });\n\n const newPages = (obj[\"newPages\"] as unknown[]).map((p, i) => {\n if (typeof p !== \"object\" \|\| p === null \|\| Array.isArray(p)) {\n throw new Error(`Invalid LLM response: newPages[${i}] must be an object`);\n }\n const page = p as Record<string, unknown>;\n if (\n typeof page[\"path\"] !== \"string\" \|\|\n typeof page[\"content\"] !== \"string\" \|\|\n typeof page[\"reason\"] !== \"string\"\n ) {\n throw new Error(\n `Invalid LLM response: newPages[${i}] must have path, content, and reason strings`,\n );\n }\n return {\n path: page[\"path\"],\n content: page[\"content\"],\n reason: page[\"reason\"],\n };\n });\n\n return {\n summary: { path: summary[\"path\"], content: summary[\"content\"] },\n updates,\n newPages,\n indexUpdate: obj[\"indexUpdate\"] as string,\n logEntry: obj[\"logEntry\"] as string,\n };\n}\n\nasync function applyIngestResult(\n project: Project,\n result: IngestResult,\n sourceContent: string,\n sourceFilename: string,\n): Promise<void> {\n // Write summary\n const summaryAbsPath = join(project.root, result.summary.path);\n assertWithinRoot(summaryAbsPath, project.root);\n await mkdir(dirname(summaryAbsPath), { recursive: true });\n await writeFile(summaryAbsPath, result.summary.content, \"utf8\");\n\n // Write updated pages\n for (const update of result.updates) {\n const absPath = join(project.root, update.path);\n assertWithinRoot(absPath, project.root);\n await mkdir(dirname(absPath), { recursive: true });\n await writeFile(absPath, update.content, \"utf8\");\n }\n\n // Write new pages\n for (const newPage of result.newPages) {\n const absPath = join(project.root, newPage.path);\n assertWithinRoot(absPath, project.root);\n await mkdir(dirname(absPath), { recursive: true });\n await writeFile(absPath, newPage.content, \"utf8\");\n }\n\n // Update _index.md\n const indexPath = join(project.wikiDir, \"_index.md\");\n await writeFile(indexPath, result.indexUpdate, \"utf8\");\n\n // Write source file to sources directory\n const sourceDestPath = join(project.sourcesDir, sourceFilename);\n await mkdir(project.sourcesDir, { recursive: true });\n await writeFile(sourceDestPath, sourceContent, \"utf8\");\n\n // Append to log.md\n const logPath = join(project.wikiDir, \"log.md\");\n const timestamp = new Date().toISOString().split(\"T\")[0];\n const logLine = `- ${timestamp}: ${result.logEntry}\\n`;\n await appendFile(logPath, logLine, \"utf8\");\n\n // Re-index\n await indexProject(project);\n}\n\nexport async function ingestSource(\n project: Project,\n sourcePath: string,\n llm: LlmAdapter,\n options?: IngestOptions,\n): Promise<IngestPlan> {\n const apply = options?.apply ?? false;\n\n // 1. Read source content\n const sourceContent = await readSource(sourcePath);\n\n // 2. Read current wiki index\n const indexPath = join(project.wikiDir, \"_index.md\");\n const currentIndex = await readFileSafe(indexPath);\n\n // 3. Read schema\n const schemaPath = join(project.kbDir, \"schema.md\");\n const schema = await readFileSafe(schemaPath);\n\n // 4. Build user message\n const userMessage = `## Wiki Schema\n${schema}\n\n## Current Wiki Index\n${currentIndex}\n\n## New Source: ${sourceContent.filename}\n${sourceContent.content}\n\nIntegrate this source into the wiki following the schema above.`;\n\n // 5. Call LLM\n const raw = await llm.complete(\n [{ role: \"user\", content: userMessage }],\n SYSTEM_PROMPT,\n );\n\n // 6. Parse response\n const result = parseIngestResult(raw);\n\n // 7. Apply if requested\n if (apply) {\n await applyIngestResult(\n project,\n result,\n sourceContent.content,\n sourceContent.filename,\n );\n }\n\n const sourceFile = join(project.sourcesDir, sourceContent.filename);\n\n return {\n result,\n sourceFile,\n dryRun: !apply,\n };\n}\n","import { readFile, writeFile, mkdir, appendFile } from \"node:fs/promises\";\nimport { existsSync } from \"node:fs\";\nimport { join, dirname, resolve } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport type { LlmAdapter } from \"./llm.js\";\nimport { openDb, closeDb } from \"./db.js\";\nimport { searchWiki } from \"./search.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport interface QueryResult {\n answer: string;\n sources: string[];\n}\n\nexport interface QueryOptions {\n save?: string;\n}\n\nconst SYSTEM_PROMPT = `You are a knowledgeable assistant answering questions about a project's knowledge base.\nAnswer concisely using only information from the provided wiki pages.\nUse [[page-name]] wikilink syntax to cite specific wiki pages in your answer.\nFormat your answer in markdown.`;\n\nfunction assertWithinRoot(absPath: string, root: string): void {\n const resolvedPath = resolve(absPath);\n const resolvedRoot = resolve(root) + \"/\";\n if (!resolvedPath.startsWith(resolvedRoot)) {\n throw new Error(\n `Unsafe path rejected: \"${absPath}\" is outside project root`,\n );\n }\n}\n\nasync function readFileSafe(filePath: string): Promise<string> {\n try {\n return await readFile(filePath, \"utf8\");\n } catch {\n return \"\";\n }\n}\n\nexport async function queryWiki(\n project: Project,\n question: string,\n llm: LlmAdapter,\n options?: QueryOptions,\n): Promise<QueryResult> {\n // 1. Auto-index if db doesn't exist\n const dbPath = join(project.kbDir, \"index.db\");\n if (!existsSync(dbPath)) {\n await indexProject(project);\n }\n\n // 2. Search for top relevant pages\n const db = openDb(project);\n let searchResults;\n try {\n searchResults = searchWiki(db, question, project.name, { limit: 10 });\n } finally {\n closeDb(db);\n }\n\n // 3. Read full content of each result page\n const pages: Array<{ path: string; title: string; content: string }> = [];\n for (const result of searchResults) {\n const absPath = join(project.root, result.path);\n const content = await readFileSafe(absPath);\n if (content) {\n pages.push({ path: result.path, title: result.title, content });\n }\n }\n\n // 4. Build user message\n const pagesSection =\n pages.length > 0\n ? pages\n .map((p) => `### ${p.title} (${p.path})\\n${p.content}`)\n .join(\"\\n\\n\")\n : \"(No wiki pages found for this query.)\";\n\n const userMessage = `## Question\\n${question}\\n\\n## Relevant Wiki Pages\\n\\n${pagesSection}`;\n\n // 5. Call LLM\n const answer = await llm.complete(\n [{ role: \"user\", content: userMessage }],\n SYSTEM_PROMPT,\n );\n\n const sources = pages.map((p) => p.path);\n\n // 6. If save option provided, write answer as wiki page and append to log\n if (options?.save) {\n const saveRelPath = options.save;\n const saveAbsPath = join(project.root, saveRelPath);\n assertWithinRoot(saveAbsPath, project.root);\n\n await mkdir(dirname(saveAbsPath), { recursive: true });\n await writeFile(saveAbsPath, answer, \"utf8\");\n\n // Append to log.md\n const logPath = join(project.wikiDir, \"log.md\");\n const timestamp = new Date().toISOString().split(\"T\")[0];\n const logEntry = `\\n## ${timestamp} — Queried: ${question}\\n\\nSaved to: ${saveRelPath}\\n`;\n await appendFile(logPath, logEntry, \"utf8\");\n\n // Re-index so saved page is searchable\n await indexProject(project);\n }\n\n return { answer, sources };\n}\n","import { readdir, stat } from \"node:fs/promises\";\nimport { join, relative, basename, extname } from \"node:path\";\nimport type { Project } from \"./project.js\";\nimport { openDb, closeDb } from \"./db.js\";\nimport { indexProject } from \"./indexer.js\";\n\nexport type LintSeverity = \"warning\" \| \"info\";\n\nexport interface LintIssue {\n severity: LintSeverity;\n code: string;\n path: string;\n message: string;\n detail?: string;\n}\n\nexport interface LintResult {\n issues: LintIssue[];\n pagesChecked: number;\n sourcesChecked: number;\n}\n\ninterface PageMetaRow {\n path: string;\n outgoing_links: string;\n word_count: number;\n mtime: number;\n updated_at: number;\n}\n\nasync function collectMdFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile() && e.name.endsWith(\".md\"))\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\nasync function collectSourceFiles(dir: string): Promise<string[]> {\n try {\n const entries = await readdir(dir, {\n recursive: true,\n withFileTypes: true,\n });\n return (\n entries\n .filter((e) => e.isFile())\n // parentPath added Node 21.4+; fall back to the pre-deprecation path property\n .map((e) => join((e as any).parentPath ?? (e as any).path, e.name))\n );\n } catch (err: unknown) {\n if ((err as NodeJS.ErrnoException).code !== \"ENOENT\") throw err;\n return [];\n }\n}\n\n/\n Build a set of \"keys\" for wiki pages for wikilink resolution.\n * A wikilink [[foo-bar]] can match:\n * - a page whose filename (without extension) is \"foo-bar\"\n * - a page whose relative path is \"foo-bar\" or \"foo-bar.md\"\n /\nfunction buildPageKeySet(\n relPaths: string[],\n projectRoot: string,\n wikiDir: string,\n): Set<string> {\n const keys = new Set<string>();\n for (const rp of relPaths) {\n // rp is relative to projectRoot, e.g. \"wiki/concepts/foo.md\"\n keys.add(rp);\n // without extension\n keys.add(rp.replace(/\\.md$/i, \"\"));\n // filename without extension\n const fname = basename(rp, \".md\");\n keys.add(fname);\n // relative path from wikiDir\n const absPath = join(projectRoot, rp);\n const relToWiki = relative(wikiDir, absPath);\n keys.add(relToWiki);\n keys.add(relToWiki.replace(/\\.md$/i, \"\"));\n }\n return keys;\n}\n\nexport async function lintProject(project: Project): Promise<LintResult> {\n // Ensure index is up to date\n await indexProject(project);\n\n const issues: LintIssue[] = [];\n\n // Collect all wiki md files\n const absWikiFiles = await collectMdFiles(project.wikiDir);\n const relWikiPaths = absWikiFiles.map((f) => relative(project.root, f));\n\n const pagesChecked = relWikiPaths.length;\n\n // Always collect source files so sourcesChecked is accurate\n const sourceFiles = await collectSourceFiles(project.sourcesDir);\n const sourcesChecked = sourceFiles.filter(\n (f) => basename(f) !== \".gitkeep\",\n ).length;\n\n if (pagesChecked === 0) {\n return { issues, pagesChecked: 0, sourcesChecked };\n }\n\n // Build page key set for wikilink resolution\n const pageKeySet = buildPageKeySet(\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n\n // Query all page_meta rows\n const db = openDb(project);\n let rows: PageMetaRow[];\n try {\n rows = db\n .prepare<\n [],\n PageMetaRow\n >(\"SELECT path, outgoing_links, word_count, mtime, updated_at FROM page_meta\")\n .all();\n } finally {\n closeDb(db);\n }\n\n // Build a map from path -> row for quick lookup\n const metaMap = new Map<string, PageMetaRow>();\n for (const row of rows) {\n metaMap.set(row.path, row);\n }\n\n // Build inbound link map\n const inboundLinks = new Map<string, Set<string>>();\n for (const rp of relWikiPaths) {\n inboundLinks.set(rp, new Set());\n }\n\n for (const row of rows) {\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n // Find which page this link resolves to\n const resolved = resolveLink(\n link,\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n if (resolved !== null) {\n const set = inboundLinks.get(resolved);\n if (set) {\n set.add(row.path);\n }\n }\n }\n }\n\n // Read _index.md outgoing links for MISSING_INDEX check\n const indexPath = relWikiPaths.find((p) => basename(p) === \"_index.md\");\n let indexLinks: Set<string> = new Set();\n if (indexPath) {\n const indexRow = metaMap.get(indexPath);\n if (indexRow) {\n let links: string[] = [];\n try {\n links = JSON.parse(indexRow.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n const resolved = resolveLink(\n link,\n relWikiPaths,\n project.root,\n project.wikiDir,\n );\n if (resolved !== null) {\n indexLinks.add(resolved);\n }\n }\n }\n }\n\n // --- CHECK 1: ORPHAN_PAGE ---\n for (const rp of relWikiPaths) {\n if (basename(rp) === \"_index.md\") continue;\n const inbound = inboundLinks.get(rp);\n if (!inbound \|\| inbound.size === 0) {\n issues.push({\n severity: \"warning\",\n code: \"ORPHAN_PAGE\",\n path: rp,\n message: \"Orphan page (no inbound links)\",\n });\n }\n }\n\n // --- CHECK 2: BROKEN_LINK ---\n for (const row of rows) {\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n for (const link of links) {\n if (!isLinkResolvable(link, pageKeySet)) {\n issues.push({\n severity: \"warning\",\n code: \"BROKEN_LINK\",\n path: row.path,\n message: `Broken wikilink [[${link}]] not found`,\n detail: link,\n });\n }\n }\n }\n\n // --- CHECK 3: STUB_PAGE ---\n for (const row of rows) {\n if (basename(row.path) === \"_index.md\") continue;\n let links: string[] = [];\n try {\n links = JSON.parse(row.outgoing_links) as string[];\n } catch {\n links = [];\n }\n if (links.length === 0 && row.word_count < 50) {\n issues.push({\n severity: \"info\",\n code: \"STUB_PAGE\",\n path: row.path,\n message: `Stub page (no links, < 50 words)`,\n });\n }\n }\n\n // --- CHECK 4: STALE_SUMMARY ---\n // wiki/sources/foo-summary.md <-> sources/foo.\n const wikiSourcesDir = join(project.wikiDir, \"sources\");\n\n for (const rp of relWikiPaths) {\n // Check if the path is under wiki/sources/\n const absWikiPage = join(project.root, rp);\n const relToWikiSources = relative(wikiSourcesDir, absWikiPage);\n\n // Skip if not under wiki/sources/ (would start with \"..\")\n if (relToWikiSources.startsWith(\"..\")) continue;\n\n // Convention: wiki/sources/foo-summary.md <-> sources/foo.\n const summaryBasename = basename(rp, \".md\");\n // Strip -summary suffix\n const sourceBasename = summaryBasename.endsWith(\"-summary\")\n ? summaryBasename.slice(0, -\"-summary\".length)\n : summaryBasename;\n\n // Find matching source file\n const matchingSource = sourceFiles.find((sf) => {\n const sfBase = basename(sf, extname(sf));\n return sfBase === sourceBasename;\n });\n\n if (!matchingSource) continue;\n\n try {\n const summaryRow = metaMap.get(rp);\n if (!summaryRow) continue;\n\n const [sourceStat, summaryStat] = await Promise.all([\n stat(matchingSource),\n stat(join(project.root, summaryRow.path)),\n ]);\n\n if (sourceStat.mtimeMs > summaryStat.mtimeMs) {\n issues.push({\n severity: \"warning\",\n code: \"STALE_SUMMARY\",\n path: rp,\n message: \"Source updated after summary\",\n detail: relative(project.root, matchingSource),\n });\n }\n } catch {\n // Ignore stat errors\n }\n }\n\n // --- CHECK 5: MISSING_INDEX ---\n for (const rp of relWikiPaths) {\n if (basename(rp) === \"_index.md\") continue;\n if (!indexPath) {\n // No _index.md exists — skip this check\n continue;\n }\n if (!indexLinks.has(rp)) {\n // Check by filename too\n const fname = basename(rp, \".md\");\n if (!indexLinks.has(fname)) {\n issues.push({\n severity: \"info\",\n code: \"MISSING_INDEX\",\n path: rp,\n message: \"Not in _index.md\",\n });\n }\n }\n }\n\n return { issues, pagesChecked, sourcesChecked };\n}\n\nfunction resolveLink(\n link: string,\n relPaths: string[],\n projectRoot: string,\n wikiDir: string,\n): string \| null {\n for (const rp of relPaths) {\n const fname = basename(rp, \".md\");\n if (fname === link) return rp;\n if (rp === link \|\| rp === `${link}.md`) return rp;\n // relative to wikiDir\n const absPath = join(projectRoot, rp);\n const relToWiki = relative(wikiDir, absPath);\n if (relToWiki === link \|\| relToWiki.replace(/\\.md$/i, \"\") === link) {\n return rp;\n }\n }\n return null;\n}\n\nfunction isLinkResolvable(link: string, pageKeySet: Set<string>): boolean {\n return pageKeySet.has(link);\n}\n","// packages/core/src/log-parser.ts\n\nexport interface ParsedLogEntry {\n heading: string;\n body: string;\n}\n\n/\n Parses a log.md file into an array of entries.\n * Each entry starts with a level-2 heading (## ...).\n * The top-level \"# Activity Log\" heading is skipped.\n */\nexport function parseLogEntries(content: string): ParsedLogEntry[] {\n const entries: ParsedLogEntry[] = [];\n const sections = content.split(/^(?=## )/m);\n\n for (const section of sections) {\n const trimmed = section.trim();\n if (!trimmed) continue;\n if (trimmed.startsWith(\"# \")) continue;\n if (!trimmed.startsWith(\"## \")) continue;\n\n const newlineIdx = trimmed.indexOf(\"\\n\");\n if (newlineIdx === -1) {\n entries.push({ heading: trimmed.slice(3).trim(), body: \"\" });\n } else {\n const heading = trimmed.slice(3, newlineIdx).trim();\n const body = trimmed.slice(newlineIdx + 1).trim();\n entries.push({ heading, body });\n }\n }\n\n return entries;\n}\n","// Core package — business logic\n\nexport const VERSION = \"0.1.0\";\n\nexport { initProject } from \"./init.js\";\nexport type { InitOptions } from \"./init.js\";\n\nexport { parseConfig } from \"./config.js\";\nexport type { KbConfig } from \"./config.js\";\n\nexport { loadProject, tryLoadProject } from \"./project.js\";\nexport type { Project } from \"./project.js\";\n\nexport { openDb, closeDb } from \"./db.js\";\n\nexport { parsePage } from \"./markdown.js\";\nexport type { ParsedPage } from \"./markdown.js\";\n\nexport { indexProject } from \"./indexer.js\";\nexport type { IndexStats } from \"./indexer.js\";\n\nexport { searchWiki } from \"./search.js\";\nexport type { SearchResult, SearchOptions } from \"./search.js\";\n\nexport { readSource } from \"./source-reader.js\";\nexport type { SourceContent, SourceType } from \"./source-reader.js\";\n\nexport { createLlmAdapter } from \"./llm.js\";\nexport type { LlmAdapter, LlmMessage } from \"./llm.js\";\n\nexport type { IngestResult } from \"./ingest-types.js\";\n\nexport { ingestSource } from \"./ingest.js\";\nexport type { IngestOptions, IngestPlan } from \"./ingest.js\";\n\nexport { queryWiki } from \"./query.js\";\nexport type { QueryResult, QueryOptions } from \"./query.js\";\n\nexport { lintProject } from \"./lint.js\";\nexport type { LintIssue, LintResult, LintSeverity } from \"./lint.js\";\n\nexport { parseLogEntries } from \"./log-parser.js\";\nexport type { ParsedLogEntry } from 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package/dist/source-reader.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"source-reader.d.ts","sourceRoot":"","sources":["../src/source-reader.ts"],"names":[],"mappings":"AAGA,MAAM,MAAM,UAAU,GAAG,UAAU,GAAG,MAAM,GAAG,KAAK,GAAG,KAAK,CAAC;AAE7D,MAAM,WAAW,aAAa;IAC5B,IAAI,EAAE,UAAU,CAAC;IACjB,YAAY,EAAE,MAAM,CAAC;IACrB,OAAO,EAAE,MAAM,CAAC;IAChB,QAAQ,EAAE,MAAM,CAAC;CAClB;AAgGD,wBAAsB,UAAU,CAAC,UAAU,EAAE,MAAM,GAAG,OAAO,CAAC,aAAa,CAAC,CAqB3E"}

package/package.json CHANGED Viewed

@@ -1,6 +1,6 @@
 {
   "name": "kb-core",
-  "version": "0.1.0",
+  "version": "0.1.2",
   "type": "module",
   "main": "dist/index.js",
   "types": "dist/index.d.ts",
@@ -16,10 +16,8 @@
     "@anthropic-ai/sdk": "^0.30.0",
     "@iarna/toml": "^2.2.5",
     "@types/better-sqlite3": "^7.6.0",
-    "@types/pdf-parse": "^1.1.4",
     "better-sqlite3": "^9.0.0",
     "gray-matter": "^4.0.3",
-    "pdf-parse": "^1.1.4",
     "remark": "^15.0.0",
     "remark-frontmatter": "^5.0.0",
     "remark-wiki-link": "^2.0.0"