k0ntext 3.1.1 → 3.2.1

package/dist/cli/commands/batch-index.d.ts

@@ -0,0 +1,20 @@
+/**
+ * Batch Index Command
+ *
+ * Indexes large monorepos by processing modules in batches.
+ * Handles the 100-file limit by splitting content across multiple batches.
+ */
+/**
+ * Batch index command options
+ */
+export interface BatchIndexOptions {
+    batchSize?: number;
+    maxFiles?: number;
+    skipEmbeddings?: boolean;
+    verbose?: boolean;
+}
+/**
+ * Batch index command
+ */
+export declare function batchIndexCommand(options: BatchIndexOptions): Promise<void>;
+//# sourceMappingURL=batch-index.d.ts.map

package/dist/cli/commands/batch-index.d.ts.map

@@ -0,0 +1 @@
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package/dist/cli/commands/batch-index.js

@@ -0,0 +1,387 @@
+/**
+ * Batch Index Command
+ *
+ * Indexes large monorepos by processing modules in batches.
+ * Handles the 100-file limit by splitting content across multiple batches.
+ */
+import chalk from 'chalk';
+import ora from 'ora';
+import fs from 'fs';
+import path from 'path';
+import { createIntelligentAnalyzer } from '../../analyzer/intelligent-analyzer.js';
+import { hasOpenRouterKey } from '../../embeddings/openrouter.js';
+import { DatabaseClient } from '../../db/client.js';
+/**
+ * Default monorepo module detection patterns
+ */
+const DEFAULT_MODULES = [
+    { name: 'root', path: '.', priority: 1, description: 'Root configuration files' },
+    { name: 'docs', path: 'docs', priority: 2, description: 'Documentation' },
+    { name: 'backend', path: 'backend', priority: 3, description: 'Backend services' },
+    { name: 'frontend', path: 'frontend', priority: 4, description: 'Frontend applications' },
+    { name: 'core', path: 'core', priority: 5, description: 'Core libraries' },
+    { name: 'shared', path: 'shared', priority: 6, description: 'Shared utilities' },
+    { name: 'packages', path: 'packages', priority: 7, description: 'Packages (npm/yarn workspaces)' },
+    { name: 'services', path: 'services', priority: 8, description: 'Microservices' },
+    { name: 'apps', path: 'apps', priority: 9, description: 'Applications' },
+    { name: 'devops', path: 'devops', priority: 10, description: 'DevOps/deployment configs' },
+];
+/**
+ * Detect monorepo structure from current directory
+ */
+function detectMonorepoStructure(projectRoot) {
+    const detectedModules = [];
+    // Always include root
+    detectedModules.push({
+        name: 'root',
+        path: '.',
+        priority: 1,
+        description: 'Root configuration and documentation'
+    });
+    // Detect common monorepo directories
+    const commonDirs = ['backend', 'frontend', 'core', 'packages', 'services', 'apps', 'docs', 'devops', 'shared', 'lib'];
+    for (const dir of commonDirs) {
+        const fullPath = path.join(projectRoot, dir);
+        if (fs.existsSync(fullPath) && fs.statSync(fullPath).isDirectory()) {
+            // Check if directory has actual code files (not empty)
+            const hasContent = fs.readdirSync(fullPath).some(item => !item.startsWith('.') && item !== 'node_modules');
+            if (hasContent) {
+                detectedModules.push({
+                    name: dir,
+                    path: dir,
+                    priority: detectedModules.length + 1,
+                    description: `${dir} module`
+                });
+            }
+        }
+    }
+    // Detect subdirectories within main modules
+    for (const module of [...detectedModules]) {
+        if (module.path === '.' || module.path === 'root')
+            continue;
+        const modulePath = path.join(projectRoot, module.path);
+        if (!fs.existsSync(modulePath))
+            continue;
+        try {
+            const entries = fs.readdirSync(modulePath, { withFileTypes: true });
+            for (const entry of entries) {
+                if (entry.isDirectory() && !entry.name.startsWith('.') && entry.name !== 'node_modules') {
+                    const subPath = path.join(module.path, entry.name);
+                    // Check if this submodule has code files
+                    const subModulePath = path.join(projectRoot, subPath);
+                    const hasCode = fs.readdirSync(subModulePath).some(item => {
+                        const ext = path.extname(item);
+                        return ['.ts', '.tsx', '.js', '.jsx', '.py', '.go', '.rs', '.java'].includes(ext);
+                    });
+                    if (hasCode) {
+                        detectedModules.push({
+                            name: `${module.name}/${entry.name}`,
+                            path: subPath,
+                            priority: detectedModules.length + 1,
+                            description: `${entry.name} submodule`
+                        });
+                    }
+                }
+            }
+        }
+        catch {
+            // Skip if we can't read directory
+        }
+    }
+    return detectedModules.sort((a, b) => a.priority - b.priority);
+}
+/**
+ * Split files into batches
+ */
+function splitIntoBatches(items, batchSize) {
+    const batches = [];
+    for (let i = 0; i < items.length; i += batchSize) {
+        batches.push(items.slice(i, i + batchSize));
+    }
+    return batches;
+}
+/**
+ * Index a single batch of files
+ */
+async function indexBatch(db, files, itemType, projectRoot, spinner) {
+    let indexedCount = 0;
+    for (const file of files) {
+        try {
+            const content = fs.existsSync(file.path)
+                ? fs.readFileSync(file.path, 'utf-8').slice(0, 20000)
+                : '';
+            if (!content)
+                continue;
+            db.upsertItem({
+                type: itemType,
+                name: path.basename(file.relativePath),
+                content,
+                filePath: file.relativePath,
+                metadata: {
+                    size: file.size,
+                    module: file.relativePath.split(path.sep)[0]
+                }
+            });
+            indexedCount++;
+        }
+        catch (error) {
+            // Skip files that can't be read
+        }
+    }
+    return indexedCount;
+}
+/**
+ * Generate embeddings for indexed items
+ */
+async function generateEmbeddingsBatch(db, filePaths, analyzer, spinner) {
+    let embeddingsCount = 0;
+    try {
+        const embeddings = new Map();
+        spinner.text = `Generating embeddings for ${filePaths.length} files...`;
+        // Process in smaller chunks to avoid overwhelming the API
+        const embeddingBatchSize = 50;
+        const batches = splitIntoBatches(filePaths, embeddingBatchSize);
+        for (let i = 0; i < batches.length; i++) {
+            const batch = batches[i];
+            spinner.text = `Generating embeddings: batch ${i + 1}/${batches.length} (${batch.length} files)...`;
+            for (const filePath of batch) {
+                try {
+                    const item = db.getAllItems().find((item) => item.filePath === filePath);
+                    if (item && item.content) {
+                        const embedding = await analyzer.embedText(item.content.slice(0, 2000));
+                        embeddings.set(filePath, embedding);
+                    }
+                }
+                catch {
+                    // Skip embedding failures
+                }
+            }
+        }
+        if (embeddings.size > 0) {
+            spinner.text = `Storing ${embeddings.size} embeddings...`;
+            for (const [filePath, embedding] of embeddings.entries()) {
+                try {
+                    const item = db.getAllItems().find((item) => item.filePath === filePath);
+                    if (item && item.id) {
+                        db.storeEmbedding(item.id, embedding);
+                        embeddingsCount++;
+                    }
+                }
+                catch {
+                    // Skip storage failures
+                }
+            }
+        }
+    }
+    catch (error) {
+        spinner.warn(`Embeddings generation partially failed: ${error instanceof Error ? error.message : error}`);
+    }
+    return embeddingsCount;
+}
+/**
+ * Batch index command
+ */
+export async function batchIndexCommand(options) {
+    console.log(`
+${chalk.cyan('╔═══════════════════════════════════════════════════════════════╗')}
+${chalk.cyan('║')}  ${chalk.bold.white('K0ntext')} ${chalk.gray('Batch Index')}                                     ${chalk.cyan('║')}
+${chalk.cyan('║')}  ${chalk.gray('Monorepo-aware batch indexing for large codebases')}        ${chalk.cyan('║')}
+${chalk.cyan('╚═══════════════════════════════════════════════════════════════╝')}
+`);
+    const projectRoot = process.cwd();
+    const batchSize = options.batchSize ? Number(options.batchSize) : 100;
+    const maxFilesPerModule = options.maxFiles ? Number(options.maxFiles) : 500;
+    const skipEmbeddings = options.skipEmbeddings || false;
+    const verbose = options.verbose || false;
+    const spinner = ora();
+    let db;
+    try {
+        spinner.start('Analyzing monorepo structure...');
+        // Detect monorepo modules
+        const modules = detectMonorepoStructure(projectRoot);
+        if (modules.length === 0) {
+            spinner.warn('No modules detected. Are you in a project directory?');
+            return;
+        }
+        spinner.succeed(`Detected ${modules.length} modules`);
+        // Show detected modules
+        console.log(chalk.bold('\nDetected Modules:'));
+        for (const module of modules) {
+            const fullPath = path.join(projectRoot, module.path);
+            let fileCount = 0;
+            try {
+                const { glob } = await import('glob');
+                const files = await glob('**/*.{ts,tsx,js,jsx,py,go,rs,java,cs,rb,php,md}', {
+                    cwd: fullPath,
+                    ignore: ['**/node_modules/**', '**/dist/**', '**/build/**', '**/.git/**'],
+                    nodir: true
+                });
+                fileCount = files.length;
+            }
+            catch {
+                // Ignore glob errors
+            }
+            console.log(`  ${chalk.cyan('•')} ${chalk.bold(module.name.padEnd(25))} ${chalk.gray(`(${fileCount} files`)}${chalk.gray(`) - ${module.description}`)}`);
+        }
+        console.log();
+        // Initialize database
+        spinner.start('Initializing database...');
+        db = new DatabaseClient(projectRoot);
+        spinner.succeed('Database initialized');
+        // Initialize analyzer
+        const analyzer = createIntelligentAnalyzer(projectRoot);
+        const hasEmbeddings = hasOpenRouterKey() && !skipEmbeddings;
+        if (!hasEmbeddings) {
+            console.log(chalk.yellow('Note: OPENROUTER_API_KEY not set. Skipping semantic embeddings.'));
+        }
+        // Track overall progress
+        const totalStats = {
+            modulesProcessed: 0,
+            docsIndexed: 0,
+            codeIndexed: 0,
+            configsIndexed: 0,
+            embeddingsGenerated: 0,
+            filesSkipped: 0
+        };
+        // Process each module
+        for (const module of modules) {
+            const modulePath = path.join(projectRoot, module.path);
+            const moduleAnalyzer = createIntelligentAnalyzer(modulePath);
+            spinner.start(`Processing module: ${module.name}...`);
+            try {
+                // Discover content in this module
+                const [docs, code, tools] = await Promise.all([
+                    moduleAnalyzer.discoverDocs(),
+                    moduleAnalyzer.discoverCode(),
+                    moduleAnalyzer.discoverToolConfigs()
+                ]);
+                const totalFiles = docs.length + code.length + tools.length;
+                if (totalFiles === 0) {
+                    spinner.info(`Skipping ${module.name} (no files found)`);
+                    continue;
+                }
+                spinner.text = `Processing ${module.name}: ${totalFiles} files found...`;
+                // Apply per-module file limit
+                const limitedCode = code.slice(0, maxFilesPerModule);
+                // Split code into batches
+                const codeBatches = splitIntoBatches(limitedCode, batchSize);
+                // Index docs (no batching needed for docs usually)
+                let moduleDocsIndexed = 0;
+                for (const doc of docs) {
+                    const content = fs.existsSync(doc.path)
+                        ? fs.readFileSync(doc.path, 'utf-8').slice(0, 50000)
+                        : '';
+                    if (content) {
+                        db.upsertItem({
+                            type: 'doc',
+                            name: path.basename(doc.relativePath),
+                            content,
+                            filePath: doc.relativePath,
+                            metadata: {
+                                size: doc.size,
+                                module: module.name
+                            }
+                        });
+                        moduleDocsIndexed++;
+                    }
+                }
+                // Index tool configs
+                let moduleConfigsIndexed = 0;
+                for (const config of tools) {
+                    const content = fs.existsSync(config.path)
+                        ? fs.readFileSync(config.path, 'utf-8').slice(0, 50000)
+                        : '';
+                    if (content) {
+                        db.upsertItem({
+                            type: 'tool_config',
+                            name: `${config.tool}:${path.basename(config.relativePath)}`,
+                            content,
+                            filePath: config.relativePath,
+                            metadata: {
+                                tool: config.tool,
+                                size: config.size,
+                                module: module.name
+                            }
+                        });
+                        moduleConfigsIndexed++;
+                    }
+                }
+                // Index code in batches
+                let moduleCodeIndexed = 0;
+                const allIndexedCodePaths = [];
+                for (let i = 0; i < codeBatches.length; i++) {
+                    const batch = codeBatches[i];
+                    spinner.text = `Processing ${module.name}: code batch ${i + 1}/${codeBatches.length} (${batch.length} files)...`;
+                    for (const codeFile of batch) {
+                        const content = fs.existsSync(codeFile.path)
+                            ? fs.readFileSync(codeFile.path, 'utf-8').slice(0, 20000)
+                            : '';
+                        if (content) {
+                            const item = db.upsertItem({
+                                type: 'code',
+                                name: path.basename(codeFile.relativePath),
+                                content,
+                                filePath: codeFile.relativePath,
+                                metadata: {
+                                    size: codeFile.size,
+                                    module: module.name
+                                }
+                            });
+                            moduleCodeIndexed++;
+                            allIndexedCodePaths.push(codeFile.relativePath);
+                        }
+                    }
+                    if (verbose) {
+                        console.log(chalk.gray(`  Batch ${i + 1}/${codeBatches.length}: ${batch.length} files indexed`));
+                    }
+                }
+                // Generate embeddings for this module
+                let moduleEmbeddings = 0;
+                if (hasEmbeddings && allIndexedCodePaths.length > 0) {
+                    moduleEmbeddings = await generateEmbeddingsBatch(db, allIndexedCodePaths, analyzer, spinner);
+                }
+                // Update stats
+                totalStats.modulesProcessed++;
+                totalStats.docsIndexed += moduleDocsIndexed;
+                totalStats.codeIndexed += moduleCodeIndexed;
+                totalStats.configsIndexed += moduleConfigsIndexed;
+                totalStats.embeddingsGenerated += moduleEmbeddings;
+                if (code.length > maxFilesPerModule) {
+                    totalStats.filesSkipped += code.length - maxFilesPerModule;
+                }
+                spinner.succeed(`${module.name}: ${moduleDocsIndexed} docs, ${moduleCodeIndexed} code, ${moduleConfigsIndexed} configs` +
+                    (moduleEmbeddings > 0 ? `, ${moduleEmbeddings} embeddings` : ''));
+            }
+            catch (error) {
+                spinner.fail(`${module.name} failed: ${error instanceof Error ? error.message : error}`);
+                // Continue with next module
+            }
+        }
+        // Final summary
+        console.log();
+        console.log(chalk.bold('Batch Index Summary:'));
+        console.log(`  ${chalk.cyan('•')} Modules Processed:  ${totalStats.modulesProcessed}`);
+        console.log(`  ${chalk.cyan('•')} Documentation Files: ${totalStats.docsIndexed}`);
+        console.log(`  ${chalk.cyan('•')} Code Files:         ${totalStats.codeIndexed}`);
+        console.log(`  ${chalk.cyan('•')} Config Files:       ${totalStats.configsIndexed}`);
+        console.log(`  ${chalk.cyan('•')} Embeddings:         ${totalStats.embeddingsGenerated}`);
+        if (totalStats.filesSkipped > 0) {
+            console.log(`  ${chalk.yellow('•')} Files Skipped:      ${totalStats.filesSkipped} (hit max-files limit)`);
+            console.log(chalk.gray(`\n  Tip: Use --max-files <n> to increase the limit per module`));
+        }
+        const totalIndexed = totalStats.docsIndexed + totalStats.codeIndexed + totalStats.configsIndexed;
+        console.log(`  ${chalk.bold.green('✓')} Total Indexed:      ${totalIndexed} files`);
+        db.close();
+    }
+    catch (error) {
+        if (spinner.isSpinning) {
+            spinner.fail('Batch indexing failed');
+        }
+        console.error(chalk.red(`\nError: ${error instanceof Error ? error.message : error}`));
+        if (db) {
+            db.close();
+        }
+        process.exit(1);
+    }
+}
+//# sourceMappingURL=batch-index.js.map

package/dist/cli/commands/batch-index.js.map

@@ -0,0 +1 @@
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package/dist/cli/index.js

@@ -25,6 +25,7 @@ import { driftDetectCommand } from './commands/drift-detect.js';
 import { crossSyncCommand } from './commands/cross-sync.js';
 import { hooksCommand } from './commands/hooks.js';
 import { factCheckCommand } from './commands/fact-check.js';
+import { batchIndexCommand } from './commands/batch-index.js';
 const __filename = fileURLToPath(import.meta.url);
 const __dirname = path.dirname(__filename);
 // Read package.json for version
@@ -518,6 +519,17 @@ function createProgram() {
             process.exit(1);
         }
     });
+    // ==================== Batch Index Command ====================
+    program
+        .command('index:batch')
+        .description('Index large monorepos by processing modules in batches')
+        .option('-b, --batch-size <n>', 'Files per batch', '100')
+        .option('-m, --max-files <n>', 'Maximum files per module', '500')
+        .option('--skip-embeddings', 'Skip generating embeddings')
+        .option('-v, --verbose', 'Show detailed output')
+        .action(async (options) => {
+        await batchIndexCommand(options);
+    });
     return program;
 }
 // Main entry point

package/dist/cli/index.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "k0ntext",
-  "version": "3.1.1",
+  "version": "3.2.1",
   "description": "Unified AI Context Engineering - Intelligent context for Claude, Copilot, Cline, and more with OpenRouter-powered initialization",
   "main": "dist/index.js",
   "types": "dist/index.d.ts",

package/src/cli/commands/batch-index.ts

@@ -0,0 +1,497 @@
+/**
+ * Batch Index Command
+ *
+ * Indexes large monorepos by processing modules in batches.
+ * Handles the 100-file limit by splitting content across multiple batches.
+ */
+
+import chalk from 'chalk';
+import ora, { Ora } from 'ora';
+import fs from 'fs';
+import path from 'path';
+
+import { createIntelligentAnalyzer, type DiscoveredFile } from '../../analyzer/intelligent-analyzer.js';
+import { hasOpenRouterKey } from '../../embeddings/openrouter.js';
+import { DatabaseClient } from '../../db/client.js';
+
+/**
+ * Monorepo module configuration
+ */
+interface MonorepoModule {
+  name: string;
+  path: string;
+  priority: number;
+  description: string;
+}
+
+/**
+ * Batch index configuration
+ */
+interface BatchIndexConfig {
+  batchSize: number;
+  maxFilesPerModule: number;
+  includePatterns: string[];
+  excludePatterns: string[];
+  modules: MonorepoModule[];
+}
+
+/**
+ * Batch index command options
+ */
+export interface BatchIndexOptions {
+  batchSize?: number;
+  maxFiles?: number;
+  skipEmbeddings?: boolean;
+  verbose?: boolean;
+}
+
+/**
+ * Default monorepo module detection patterns
+ */
+const DEFAULT_MODULES: MonorepoModule[] = [
+  { name: 'root', path: '.', priority: 1, description: 'Root configuration files' },
+  { name: 'docs', path: 'docs', priority: 2, description: 'Documentation' },
+  { name: 'backend', path: 'backend', priority: 3, description: 'Backend services' },
+  { name: 'frontend', path: 'frontend', priority: 4, description: 'Frontend applications' },
+  { name: 'core', path: 'core', priority: 5, description: 'Core libraries' },
+  { name: 'shared', path: 'shared', priority: 6, description: 'Shared utilities' },
+  { name: 'packages', path: 'packages', priority: 7, description: 'Packages (npm/yarn workspaces)' },
+  { name: 'services', path: 'services', priority: 8, description: 'Microservices' },
+  { name: 'apps', path: 'apps', priority: 9, description: 'Applications' },
+  { name: 'devops', path: 'devops', priority: 10, description: 'DevOps/deployment configs' },
+];
+
+/**
+ * Detect monorepo structure from current directory
+ */
+function detectMonorepoStructure(projectRoot: string): MonorepoModule[] {
+  const detectedModules: MonorepoModule[] = [];
+
+  // Always include root
+  detectedModules.push({
+    name: 'root',
+    path: '.',
+    priority: 1,
+    description: 'Root configuration and documentation'
+  });
+
+  // Detect common monorepo directories
+  const commonDirs = ['backend', 'frontend', 'core', 'packages', 'services', 'apps', 'docs', 'devops', 'shared', 'lib'];
+
+  for (const dir of commonDirs) {
+    const fullPath = path.join(projectRoot, dir);
+    if (fs.existsSync(fullPath) && fs.statSync(fullPath).isDirectory()) {
+      // Check if directory has actual code files (not empty)
+      const hasContent = fs.readdirSync(fullPath).some(
+        item => !item.startsWith('.') && item !== 'node_modules'
+      );
+
+      if (hasContent) {
+        detectedModules.push({
+          name: dir,
+          path: dir,
+          priority: detectedModules.length + 1,
+          description: `${dir} module`
+        });
+      }
+    }
+  }
+
+  // Detect subdirectories within main modules
+  for (const module of [...detectedModules]) {
+    if (module.path === '.' || module.path === 'root') continue;
+
+    const modulePath = path.join(projectRoot, module.path);
+    if (!fs.existsSync(modulePath)) continue;
+
+    try {
+      const entries = fs.readdirSync(modulePath, { withFileTypes: true });
+      for (const entry of entries) {
+        if (entry.isDirectory() && !entry.name.startsWith('.') && entry.name !== 'node_modules') {
+          const subPath = path.join(module.path, entry.name);
+
+          // Check if this submodule has code files
+          const subModulePath = path.join(projectRoot, subPath);
+          const hasCode = fs.readdirSync(subModulePath).some(
+            item => {
+              const ext = path.extname(item);
+              return ['.ts', '.tsx', '.js', '.jsx', '.py', '.go', '.rs', '.java'].includes(ext);
+            }
+          );
+
+          if (hasCode) {
+            detectedModules.push({
+              name: `${module.name}/${entry.name}`,
+              path: subPath,
+              priority: detectedModules.length + 1,
+              description: `${entry.name} submodule`
+            });
+          }
+        }
+      }
+    } catch {
+      // Skip if we can't read directory
+    }
+  }
+
+  return detectedModules.sort((a, b) => a.priority - b.priority);
+}
+
+/**
+ * Split files into batches
+ */
+function splitIntoBatches<T>(items: T[], batchSize: number): T[][] {
+  const batches: T[][] = [];
+  for (let i = 0; i < items.length; i += batchSize) {
+    batches.push(items.slice(i, i + batchSize));
+  }
+  return batches;
+}
+
+/**
+ * Index a single batch of files
+ */
+async function indexBatch(
+  db: any,
+  files: DiscoveredFile[],
+  itemType: string,
+  projectRoot: string,
+  spinner: Ora
+): Promise<number> {
+  let indexedCount = 0;
+
+  for (const file of files) {
+    try {
+      const content = fs.existsSync(file.path)
+        ? fs.readFileSync(file.path, 'utf-8').slice(0, 20000)
+        : '';
+
+      if (!content) continue;
+
+      db.upsertItem({
+        type: itemType as any,
+        name: path.basename(file.relativePath),
+        content,
+        filePath: file.relativePath,
+        metadata: {
+          size: file.size,
+          module: file.relativePath.split(path.sep)[0]
+        }
+      });
+
+      indexedCount++;
+    } catch (error) {
+      // Skip files that can't be read
+    }
+  }
+
+  return indexedCount;
+}
+
+/**
+ * Generate embeddings for indexed items
+ */
+async function generateEmbeddingsBatch(
+  db: any,
+  filePaths: string[],
+  analyzer: any,
+  spinner: Ora
+): Promise<number> {
+  let embeddingsCount = 0;
+
+  try {
+    const embeddings = new Map<string, number[]>();
+
+    spinner.text = `Generating embeddings for ${filePaths.length} files...`;
+
+    // Process in smaller chunks to avoid overwhelming the API
+    const embeddingBatchSize = 50;
+    const batches = splitIntoBatches(filePaths, embeddingBatchSize);
+
+    for (let i = 0; i < batches.length; i++) {
+      const batch = batches[i];
+      spinner.text = `Generating embeddings: batch ${i + 1}/${batches.length} (${batch.length} files)...`;
+
+      for (const filePath of batch) {
+        try {
+          const item = db.getAllItems().find((item: any) => item.filePath === filePath);
+          if (item && item.content) {
+            const embedding = await analyzer.embedText(item.content.slice(0, 2000));
+            embeddings.set(filePath, embedding);
+          }
+        } catch {
+          // Skip embedding failures
+        }
+      }
+    }
+
+    if (embeddings.size > 0) {
+      spinner.text = `Storing ${embeddings.size} embeddings...`;
+
+      for (const [filePath, embedding] of embeddings.entries()) {
+        try {
+          const item = db.getAllItems().find((item: any) => item.filePath === filePath);
+          if (item && item.id) {
+            db.storeEmbedding(item.id, embedding);
+            embeddingsCount++;
+          }
+        } catch {
+          // Skip storage failures
+        }
+      }
+    }
+  } catch (error) {
+    spinner.warn(`Embeddings generation partially failed: ${error instanceof Error ? error.message : error}`);
+  }
+
+  return embeddingsCount;
+}
+
+/**
+ * Batch index command
+ */
+export async function batchIndexCommand(options: BatchIndexOptions): Promise<void> {
+  console.log(`
+${chalk.cyan('╔═══════════════════════════════════════════════════════════════╗')}
+${chalk.cyan('║')}  ${chalk.bold.white('K0ntext')} ${chalk.gray('Batch Index')}                                     ${chalk.cyan('║')}
+${chalk.cyan('║')}  ${chalk.gray('Monorepo-aware batch indexing for large codebases')}        ${chalk.cyan('║')}
+${chalk.cyan('╚═══════════════════════════════════════════════════════════════╝')}
+`);
+
+  const projectRoot = process.cwd();
+  const batchSize = options.batchSize ? Number(options.batchSize) : 100;
+  const maxFilesPerModule = options.maxFiles ? Number(options.maxFiles) : 500;
+  const skipEmbeddings = options.skipEmbeddings || false;
+  const verbose = options.verbose || false;
+
+  const spinner = ora();
+  let db: any;
+
+  try {
+    spinner.start('Analyzing monorepo structure...');
+
+    // Detect monorepo modules
+    const modules = detectMonorepoStructure(projectRoot);
+
+    if (modules.length === 0) {
+      spinner.warn('No modules detected. Are you in a project directory?');
+      return;
+    }
+
+    spinner.succeed(`Detected ${modules.length} modules`);
+
+    // Show detected modules
+    console.log(chalk.bold('\nDetected Modules:'));
+    for (const module of modules) {
+      const fullPath = path.join(projectRoot, module.path);
+      let fileCount = 0;
+
+      try {
+        const { glob } = await import('glob');
+        const files = await glob('**/*.{ts,tsx,js,jsx,py,go,rs,java,cs,rb,php,md}', {
+          cwd: fullPath,
+          ignore: ['**/node_modules/**', '**/dist/**', '**/build/**', '**/.git/**'],
+          nodir: true
+        });
+        fileCount = files.length;
+      } catch {
+        // Ignore glob errors
+      }
+
+      console.log(
+        `  ${chalk.cyan('•')} ${chalk.bold(module.name.padEnd(25))} ${chalk.gray(`(${fileCount} files`)}${chalk.gray(`) - ${module.description}`)}`
+      );
+    }
+
+    console.log();
+
+    // Initialize database
+    spinner.start('Initializing database...');
+    db = new DatabaseClient(projectRoot);
+    spinner.succeed('Database initialized');
+
+    // Initialize analyzer
+    const analyzer = createIntelligentAnalyzer(projectRoot);
+    const hasEmbeddings = hasOpenRouterKey() && !skipEmbeddings;
+
+    if (!hasEmbeddings) {
+      console.log(chalk.yellow('Note: OPENROUTER_API_KEY not set. Skipping semantic embeddings.'));
+    }
+
+    // Track overall progress
+    const totalStats = {
+      modulesProcessed: 0,
+      docsIndexed: 0,
+      codeIndexed: 0,
+      configsIndexed: 0,
+      embeddingsGenerated: 0,
+      filesSkipped: 0
+    };
+
+    // Process each module
+    for (const module of modules) {
+      const modulePath = path.join(projectRoot, module.path);
+      const moduleAnalyzer = createIntelligentAnalyzer(modulePath);
+
+      spinner.start(`Processing module: ${module.name}...`);
+
+      try {
+        // Discover content in this module
+        const [docs, code, tools] = await Promise.all([
+          moduleAnalyzer.discoverDocs(),
+          moduleAnalyzer.discoverCode(),
+          moduleAnalyzer.discoverToolConfigs()
+        ]);
+
+        const totalFiles = docs.length + code.length + tools.length;
+
+        if (totalFiles === 0) {
+          spinner.info(`Skipping ${module.name} (no files found)`);
+          continue;
+        }
+
+        spinner.text = `Processing ${module.name}: ${totalFiles} files found...`;
+
+        // Apply per-module file limit
+        const limitedCode = code.slice(0, maxFilesPerModule);
+
+        // Split code into batches
+        const codeBatches = splitIntoBatches(limitedCode, batchSize);
+
+        // Index docs (no batching needed for docs usually)
+        let moduleDocsIndexed = 0;
+        for (const doc of docs) {
+          const content = fs.existsSync(doc.path)
+            ? fs.readFileSync(doc.path, 'utf-8').slice(0, 50000)
+            : '';
+
+          if (content) {
+            db.upsertItem({
+              type: 'doc',
+              name: path.basename(doc.relativePath),
+              content,
+              filePath: doc.relativePath,
+              metadata: {
+                size: doc.size,
+                module: module.name
+              }
+            });
+            moduleDocsIndexed++;
+          }
+        }
+
+        // Index tool configs
+        let moduleConfigsIndexed = 0;
+        for (const config of tools) {
+          const content = fs.existsSync(config.path)
+            ? fs.readFileSync(config.path, 'utf-8').slice(0, 50000)
+            : '';
+
+          if (content) {
+            db.upsertItem({
+              type: 'tool_config',
+              name: `${config.tool}:${path.basename(config.relativePath)}`,
+              content,
+              filePath: config.relativePath,
+              metadata: {
+                tool: config.tool,
+                size: config.size,
+                module: module.name
+              }
+            });
+            moduleConfigsIndexed++;
+          }
+        }
+
+        // Index code in batches
+        let moduleCodeIndexed = 0;
+        const allIndexedCodePaths: string[] = [];
+
+        for (let i = 0; i < codeBatches.length; i++) {
+          const batch = codeBatches[i];
+          spinner.text = `Processing ${module.name}: code batch ${i + 1}/${codeBatches.length} (${batch.length} files)...`;
+
+          for (const codeFile of batch) {
+            const content = fs.existsSync(codeFile.path)
+              ? fs.readFileSync(codeFile.path, 'utf-8').slice(0, 20000)
+              : '';
+
+            if (content) {
+              const item = db.upsertItem({
+                type: 'code',
+                name: path.basename(codeFile.relativePath),
+                content,
+                filePath: codeFile.relativePath,
+                metadata: {
+                  size: codeFile.size,
+                  module: module.name
+                }
+              });
+              moduleCodeIndexed++;
+              allIndexedCodePaths.push(codeFile.relativePath);
+            }
+          }
+
+          if (verbose) {
+            console.log(chalk.gray(`  Batch ${i + 1}/${codeBatches.length}: ${batch.length} files indexed`));
+          }
+        }
+
+        // Generate embeddings for this module
+        let moduleEmbeddings = 0;
+        if (hasEmbeddings && allIndexedCodePaths.length > 0) {
+          moduleEmbeddings = await generateEmbeddingsBatch(db, allIndexedCodePaths, analyzer, spinner);
+        }
+
+        // Update stats
+        totalStats.modulesProcessed++;
+        totalStats.docsIndexed += moduleDocsIndexed;
+        totalStats.codeIndexed += moduleCodeIndexed;
+        totalStats.configsIndexed += moduleConfigsIndexed;
+        totalStats.embeddingsGenerated += moduleEmbeddings;
+
+        if (code.length > maxFilesPerModule) {
+          totalStats.filesSkipped += code.length - maxFilesPerModule;
+        }
+
+        spinner.succeed(
+          `${module.name}: ${moduleDocsIndexed} docs, ${moduleCodeIndexed} code, ${moduleConfigsIndexed} configs` +
+            (moduleEmbeddings > 0 ? `, ${moduleEmbeddings} embeddings` : '')
+        );
+
+      } catch (error) {
+        spinner.fail(`${module.name} failed: ${error instanceof Error ? error.message : error}`);
+        // Continue with next module
+      }
+    }
+
+    // Final summary
+    console.log();
+    console.log(chalk.bold('Batch Index Summary:'));
+    console.log(`  ${chalk.cyan('•')} Modules Processed:  ${totalStats.modulesProcessed}`);
+    console.log(`  ${chalk.cyan('•')} Documentation Files: ${totalStats.docsIndexed}`);
+    console.log(`  ${chalk.cyan('•')} Code Files:         ${totalStats.codeIndexed}`);
+    console.log(`  ${chalk.cyan('•')} Config Files:       ${totalStats.configsIndexed}`);
+    console.log(`  ${chalk.cyan('•')} Embeddings:         ${totalStats.embeddingsGenerated}`);
+
+    if (totalStats.filesSkipped > 0) {
+      console.log(`  ${chalk.yellow('•')} Files Skipped:      ${totalStats.filesSkipped} (hit max-files limit)`);
+      console.log(chalk.gray(`\n  Tip: Use --max-files <n> to increase the limit per module`));
+    }
+
+    const totalIndexed = totalStats.docsIndexed + totalStats.codeIndexed + totalStats.configsIndexed;
+    console.log(`  ${chalk.bold.green('✓')} Total Indexed:      ${totalIndexed} files`);
+
+    db.close();
+
+  } catch (error) {
+    if (spinner.isSpinning) {
+      spinner.fail('Batch indexing failed');
+    }
+    console.error(chalk.red(`\nError: ${error instanceof Error ? error.message : error}`));
+    if (db) {
+      db.close();
+    }
+    process.exit(1);
+  }
+}

package/src/cli/index.ts

@@ -28,6 +28,7 @@ import { driftDetectCommand } from './commands/drift-detect.js';
 import { crossSyncCommand } from './commands/cross-sync.js';
 import { hooksCommand } from './commands/hooks.js';
 import { factCheckCommand } from './commands/fact-check.js';
+import { batchIndexCommand } from './commands/batch-index.js';
 
 const __filename = fileURLToPath(import.meta.url);
 const __dirname = path.dirname(__filename);
@@ -586,15 +587,27 @@ function createProgram(): Command {
         console.log(`  ${chalk.cyan('•')} Embeddings: ${stats.embeddings}`);
         console.log(`  ${chalk.cyan('•')} Tool Configs: ${stats.toolConfigs}`);
         console.log(`  ${chalk.cyan('•')} Database Path: ${db.getPath()}`);
-        
+
         db.close();
-        
+
       } catch (error) {
         console.error(chalk.red(`\nError: ${error instanceof Error ? error.message : error}`));
         process.exit(1);
       }
     });
 
+  // ==================== Batch Index Command ====================
+  program
+    .command('index:batch')
+    .description('Index large monorepos by processing modules in batches')
+    .option('-b, --batch-size <n>', 'Files per batch', '100')
+    .option('-m, --max-files <n>', 'Maximum files per module', '500')
+    .option('--skip-embeddings', 'Skip generating embeddings')
+    .option('-v, --verbose', 'Show detailed output')
+    .action(async (options) => {
+      await batchIndexCommand(options);
+    });
+
   return program;
 }