jstar-reviewer 2.1.3 → 2.2.0

package/scripts/reviewer.ts

@@ -5,12 +5,15 @@ import * as path from "path";
 import * as fs from "fs";
 import chalk from "chalk";
 import simpleGit from "simple-git";
+import { Logger } from "./utils/logger";
 import { Config } from "./config";
 import { Detective } from "./detective";
 import { GeminiEmbedding } from "./gemini-embedding";
 import { MockLLM } from "./mock-llm";
 import { FileFinding, DashboardReport, LLMReviewResponse, EMPTY_REVIEW } from "./types";
 import { renderDashboard, determineStatus, generateRecommendation } from "./dashboard";
+import { startInteractiveSession } from "./session";
+import { critiqueFindings } from "./core/critique";
 import {
     VectorStoreIndex,
     storageContextFromDefaults,
@@ -18,7 +21,8 @@ import {
     serviceContextFromDefaults
 } from "llamaindex";
 
-const google = createGoogleGenerativeAI({ apiKey: process.env.GOOGLE_API_KEY });
+const geminiKey = process.env.GEMINI_API_KEY || process.env.GOOGLE_API_KEY || process.env.GOOGLE_GENERATIVE_AI_API_KEY;
+const google = createGoogleGenerativeAI({ apiKey: geminiKey });
 const groq = createGroq({ apiKey: process.env.GROQ_API_KEY });
 
 const embedModel = new GeminiEmbedding();
@@ -65,6 +69,38 @@ function sleep(ms: number): Promise<void> {
     return new Promise(resolve => setTimeout(resolve, ms));
 }
 
+/**
+ * Filter issues by confidence threshold and log what was removed
+ */
+function filterByConfidence(findings: FileFinding[]): FileFinding[] {
+    const threshold = Config.CONFIDENCE_THRESHOLD;
+    let removedCount = 0;
+
+    const filtered = findings.map(finding => {
+        const validIssues = finding.issues.filter(issue => {
+            const confidence = issue.confidenceScore ?? 5; // Default to high if not specified
+            if (confidence < threshold) {
+                removedCount++;
+                Logger.info(chalk.dim(`   ⚡ Low confidence (${confidence}): "${issue.title}" - filtered out`));
+                return false;
+            }
+            return true;
+        });
+
+        return {
+            ...finding,
+            issues: validIssues,
+            severity: validIssues.length === 0 ? 'LGTM' as const : finding.severity
+        };
+    });
+
+    if (removedCount > 0) {
+        Logger.info(chalk.blue(`\n   📊 Confidence Filter: ${removedCount} low-confidence issue(s) removed\n`));
+    }
+
+    return filtered;
+}
+
 function parseReviewResponse(text: string): LLMReviewResponse {
     try {
         // Try to extract JSON from the response
@@ -107,20 +143,23 @@ function parseReviewResponse(text: string): LLMReviewResponse {
 
 // --- Main ---
 async function main() {
-    console.log(chalk.blue("🕵️  J-Star Reviewer: Analyzing your changes...\n"));
+    // Initialize logger mode based on CLI flags
+    Logger.init();
+
+    Logger.info(chalk.blue("🕵️  J-Star Reviewer: Analyzing your changes...\n"));
 
     // 0. Environment Validation
-    if (!process.env.GOOGLE_API_KEY || !process.env.GROQ_API_KEY) {
-        console.error(chalk.red("❌ Missing API Keys!"));
-        console.log(chalk.yellow("\nPlease ensure you have a .env.local file with:"));
-        console.log(chalk.white("- GOOGLE_API_KEY"));
-        console.log(chalk.white("- GROQ_API_KEY"));
-        console.log(chalk.white("\nCheck .env.example for a template.\n"));
+    if (!geminiKey || !process.env.GROQ_API_KEY) {
+        Logger.error(chalk.red("❌ Missing API Keys!"));
+        Logger.info(chalk.yellow("\nPlease ensure you have a .env.local file with:"));
+        Logger.info(chalk.white("- GEMINI_API_KEY (or GOOGLE_API_KEY)"));
+        Logger.info(chalk.white("- GROQ_API_KEY"));
+        Logger.info(chalk.white("\nCheck .env.example for a template.\n"));
         return;
     }
 
     // 1. Detective
-    console.log(chalk.blue("🔎 Running Detective Engine..."));
+    Logger.info(chalk.blue("🔎 Running Detective Engine..."));
 
     const detective = new Detective(SOURCE_DIR);
     await detective.scan();
@@ -129,13 +168,13 @@ async function main() {
     // 1. Get the Diff
     const diff = await git.diff(["--staged"]);
     if (!diff) {
-        console.log(chalk.green("\n✅ No staged changes to review. (Did you 'git add'?)"));
+        Logger.info(chalk.green("\n✅ No staged changes to review. (Did you 'git add'?)"));
         return;
     }
 
     // 2. Load the Brain
     if (!fs.existsSync(STORAGE_DIR)) {
-        console.error(chalk.red("❌ Local Brain not found. Run 'pnpm run index:init' first."));
+        Logger.error(chalk.red("❌ Local Brain not found. Run 'pnpm run index:init' first."));
         return;
     }
     const storageContext = await storageContextFromDefaults({ persistDir: STORAGE_DIR });
@@ -149,15 +188,15 @@ async function main() {
     const contextNodes = await retriever.retrieve(keywords);
     const relatedContext = contextNodes.map(n => n.node.getContent(MetadataMode.NONE).slice(0, 1500)).join("\n");
 
-    console.log(chalk.yellow(`\n🧠 Found ${contextNodes.length} context chunk.`));
+    Logger.info(chalk.yellow(`\n🧠 Found ${contextNodes.length} context chunk.`));
 
     // 4. Chunk the Diff
     const fileChunks = chunkDiffByFile(diff);
     const totalTokens = estimateTokens(diff);
-    console.log(chalk.dim(`   Total diff: ~${totalTokens} tokens across ${fileChunks.length} files.`));
+    Logger.info(chalk.dim(`   Total diff: ~${totalTokens} tokens across ${fileChunks.length} files.`));
 
-    // 5. Structured JSON Prompt
-    const systemPrompt = `You are J-Star, a Senior Code Reviewer. Be direct and professional.
+    // 5. Structured JSON Prompt (Conservative)
+    const systemPrompt = `You are J-Star, a Senior Code Reviewer. Be CONSERVATIVE and PRECISE.
 
 Analyze the Git Diff and return a JSON response with this EXACT structure:
 {
@@ -167,7 +206,8 @@ Analyze the Git Diff and return a JSON response with this EXACT structure:
       "title": "Short issue title",
       "description": "Detailed description of the problem",
       "line": 42,
-      "fixPrompt": "A specific prompt an AI can use to fix this issue"
+      "fixPrompt": "A specific prompt an AI can use to fix this issue",
+      "confidenceScore": 5
     }
   ]
 }
@@ -178,10 +218,20 @@ SEVERITY GUIDE:
 - P2_MEDIUM: Code quality, missing types, cleanup needed
 - LGTM: No issues found (return empty issues array)
 
-IMPORTANT: 
-- Return ONLY valid JSON, no markdown or explanation
-- Each issue MUST have a fixPrompt that explains exactly how to fix it
-- If the file is clean, return {"severity": "LGTM", "issues": []}
+CONFIDENCE SCORE (1-5) - BE HONEST:
+- 5: Absolutely certain. The bug is obvious in the diff.
+- 4: Very likely. Clear code smell or anti-pattern.
+- 3: Probable issue, might be missing context.
+- 2: Unsure, could be intentional.
+- 1: Speculation, likely false positive.
+
+CRITICAL RULES:
+1. Only flag issues you are HIGHLY confident about (4-5).
+2. Test mocks, stubs, and intentional patterns are NOT bugs.
+3. If the code looks intentional or well-handled, it's probably fine.
+4. When in doubt, lean towards LGTM.
+5. Return ONLY valid JSON, no markdown.
+6. If the file is clean: {"severity": "LGTM", "issues": []}
 
 Context: ${relatedContext.slice(0, 800)}`;
 
@@ -189,7 +239,7 @@ Context: ${relatedContext.slice(0, 800)}`;
     let chunkIndex = 0;
     let skippedCount = 0;
 
-    console.log(chalk.blue("\n⚖️  Sending to Judge...\n"));
+    Logger.info(chalk.blue("\n⚖️  Sending to Judge...\n"));
 
     for (const chunk of fileChunks) {
         chunkIndex++;
@@ -197,7 +247,7 @@ Context: ${relatedContext.slice(0, 800)}`;
 
         // Skip excluded files
         if (shouldSkipFile(fileName)) {
-            console.log(chalk.dim(`   ⏭️  Skipping ${fileName} (excluded)`));
+            Logger.info(chalk.dim(`   ⏭️  Skipping ${fileName} (excluded)`));
             skippedCount++;
             continue;
         }
@@ -206,7 +256,7 @@ Context: ${relatedContext.slice(0, 800)}`;
 
         // Skip huge files
         if (chunkTokens > MAX_TOKENS_PER_REQUEST) {
-            console.log(chalk.yellow(`   ⚠️  Skipping ${fileName} (too large: ~${chunkTokens} tokens)`));
+            Logger.info(chalk.yellow(`   ⚠️  Skipping ${fileName} (too large: ~${chunkTokens} tokens)`));
             findings.push({
                 file: fileName,
                 severity: Config.DEFAULT_SEVERITY,
@@ -219,7 +269,7 @@ Context: ${relatedContext.slice(0, 800)}`;
             continue;
         }
 
-        process.stdout.write(chalk.dim(`   📄 ${fileName}...`));
+        Logger.progress(chalk.dim(`   📄 ${fileName}...`));
 
         try {
             const { text } = await generateText({
@@ -239,10 +289,10 @@ Context: ${relatedContext.slice(0, 800)}`;
             const emoji = response.severity === 'LGTM' ? '✅' :
                 response.severity === 'P0_CRITICAL' ? '🛑' :
                     response.severity === 'P1_HIGH' ? '⚠️' : '📝';
-            console.log(` ${emoji}`);
+            Logger.info(` ${emoji}`);
 
         } catch (error: any) {
-            console.log(chalk.red(` ❌ (${error.message.slice(0, 50)})`));
+            Logger.info(chalk.red(` ❌ (${error.message.slice(0, 50)})`));
             findings.push({
                 file: fileName,
                 severity: Config.DEFAULT_SEVERITY,
@@ -260,15 +310,24 @@ Context: ${relatedContext.slice(0, 800)}`;
         }
     }
 
-    // 6. Build Dashboard Report
+    // 6. Confidence Filtering
+    Logger.info(chalk.blue("\n🎯 Filtering by Confidence...\n"));
+    let filteredFindings = filterByConfidence(findings);
+
+    // 7. Self-Critique Pass (if enabled)
+    if (Config.ENABLE_SELF_CRITIQUE) {
+        filteredFindings = await critiqueFindings(filteredFindings, diff);
+    }
+
+    // 8. Build Dashboard Report
     const metrics = {
         filesScanned: fileChunks.length - skippedCount,
         totalTokens,
-        violations: findings.reduce((sum, f) => sum + f.issues.length, 0),
-        critical: findings.filter(f => f.severity === 'P0_CRITICAL').length,
-        high: findings.filter(f => f.severity === 'P1_HIGH').length,
-        medium: findings.filter(f => f.severity === 'P2_MEDIUM').length,
-        lgtm: findings.filter(f => f.severity === 'LGTM').length,
+        violations: filteredFindings.reduce((sum, f) => sum + f.issues.length, 0),
+        critical: filteredFindings.filter(f => f.severity === 'P0_CRITICAL').length,
+        high: filteredFindings.filter(f => f.severity === 'P1_HIGH').length,
+        medium: filteredFindings.filter(f => f.severity === 'P2_MEDIUM').length,
+        lgtm: filteredFindings.filter(f => f.severity === 'LGTM').length,
     };
 
     const report: DashboardReport = {
@@ -276,7 +335,7 @@ Context: ${relatedContext.slice(0, 800)}`;
         reviewer: 'Detective Engine & Judge',
         status: determineStatus(metrics),
         metrics,
-        findings,
+        findings: filteredFindings,
         recommendedAction: generateRecommendation(metrics)
     };
 
@@ -287,20 +346,72 @@ Context: ${relatedContext.slice(0, 800)}`;
     fs.mkdirSync(path.dirname(OUTPUT_FILE), { recursive: true });
     fs.writeFileSync(OUTPUT_FILE, dashboard);
 
-    console.log("\n" + chalk.bold.green("📊 DASHBOARD GENERATED"));
-    console.log(chalk.dim(`   Saved to: ${OUTPUT_FILE}`));
-    console.log("\n" + chalk.bold.white("─".repeat(50)));
+    // Save Session State for "jstar chat"
+    const SESSION_FILE = path.join(process.cwd(), ".jstar", "session.json");
+    fs.writeFileSync(SESSION_FILE, JSON.stringify({
+        date: report.date,
+        findings: report.findings,
+        metrics: report.metrics
+    }, null, 2));
+
+    Logger.info("\n" + chalk.bold.green("📊 DASHBOARD GENERATED"));
+    Logger.info(chalk.dim(`   Saved to: ${OUTPUT_FILE}`));
+    Logger.info("\n" + chalk.bold.white("─".repeat(50)));
 
     // Print summary to console
     const statusEmoji = report.status === 'APPROVED' ? '🟢' :
         report.status === 'NEEDS_REVIEW' ? '🟡' : '🔴';
-    console.log(`\n${statusEmoji} Status: ${report.status.replace('_', ' ')}`);
-    console.log(`   🛑 Critical: ${metrics.critical}`);
-    console.log(`   ⚠️  High: ${metrics.high}`);
-    console.log(`   📝 Medium: ${metrics.medium}`);
-    console.log(`   ✅ LGTM: ${metrics.lgtm}`);
-    console.log(`\n💡 ${report.recommendedAction}`);
-    console.log(chalk.dim(`\n📄 Full report: ${OUTPUT_FILE}`));
+    Logger.info(`\n${statusEmoji} Status: ${report.status.replace('_', ' ')}`);
+    Logger.info(`   🛑 Critical: ${metrics.critical}`);
+    Logger.info(`   ⚠️  High: ${metrics.high}`);
+    Logger.info(`   📝 Medium: ${metrics.medium}`);
+    Logger.info(`   ✅ LGTM: ${metrics.lgtm}`);
+    Logger.info(`\n💡 ${report.recommendedAction}`);
+    Logger.info(chalk.dim(`\n📄 Full report: ${OUTPUT_FILE}`));
+
+    // 8. Interactive Session OR JSON Output
+    if (Logger.isHeadless()) {
+        // In JSON mode: output report to stdout and skip interactive session
+        Logger.json(report);
+    } else {
+        // Normal TUI mode: start interactive session
+        const { updatedFindings, hasUpdates } = await startInteractiveSession(findings, index);
+
+        if (hasUpdates) {
+            Logger.info(chalk.blue("\n🔄 Updating Dashboard with session changes..."));
+
+            // Recalculate metrics
+            const newMetrics = {
+                filesScanned: fileChunks.length - skippedCount,
+                totalTokens,
+                violations: updatedFindings.reduce((sum, f) => sum + f.issues.length, 0),
+                critical: updatedFindings.filter(f => f.severity === 'P0_CRITICAL').length,
+                high: updatedFindings.filter(f => f.severity === 'P1_HIGH').length,
+                medium: updatedFindings.filter(f => f.severity === 'P2_MEDIUM').length,
+                lgtm: updatedFindings.filter(f => f.severity === 'LGTM').length,
+            };
+
+            const newReport: DashboardReport = {
+                ...report, // Keep date/reviewer
+                metrics: newMetrics,
+                findings: updatedFindings,
+                status: determineStatus(newMetrics),
+                recommendedAction: generateRecommendation(newMetrics)
+            };
+
+            const newDashboard = renderDashboard(newReport);
+            fs.writeFileSync(OUTPUT_FILE, newDashboard);
+
+            // Also update session file with new findings
+            fs.writeFileSync(SESSION_FILE, JSON.stringify({
+                date: newReport.date,
+                findings: newReport.findings,
+                metrics: newReport.metrics
+            }, null, 2));
+
+            Logger.info(chalk.bold.green("📊 DASHBOARD UPDATED"));
+        }
+    }
 }
 
 main().catch(console.error);

package/scripts/session.ts

@@ -0,0 +1,312 @@
+import { FileFinding, ReviewIssue } from "./types";
+import { showActionMenu, askForArgument } from "./ui/interaction";
+import { debateIssue } from "./core/debate";
+import { VectorStoreIndex } from "llamaindex";
+import { Logger } from "./utils/logger";
+import chalk from "chalk";
+import prompts from "prompts";
+import * as readline from "readline";
+
+export async function startInteractiveSession(
+    findings: FileFinding[],
+    index: VectorStoreIndex
+): Promise<{ updatedFindings: FileFinding[], hasUpdates: boolean }> {
+
+    // Deep clone to track local state without mutating original immediately (though we return updated findings)
+    const interactiveFindings: FileFinding[] = JSON.parse(JSON.stringify(findings));
+    let hasUpdates = false;
+    let active = true;
+
+    if (interactiveFindings.length === 0 || interactiveFindings.every(f => f.issues.length === 0)) {
+        return { updatedFindings: interactiveFindings, hasUpdates: false };
+    }
+
+    console.log(chalk.bold.magenta("\n🗣️  Interactive Review Session"));
+    console.log(chalk.dim("   Use arrow keys to navigate. Select an issue to debate."));
+
+    while (active) {
+        // Re-calculate choices every loop to reflect status changes
+        // Flatten
+        const flatIssues: {
+            issue: ReviewIssue,
+            fileIndex: number,
+            issueIndex: number,
+            file: string
+        }[] = [];
+
+        interactiveFindings.forEach((f, fIdx) => {
+            f.issues.forEach((i, iIdx) => {
+                flatIssues.push({
+                    issue: i,
+                    fileIndex: fIdx,
+                    issueIndex: iIdx,
+                    file: f.file
+                });
+            });
+        });
+
+        const choices = flatIssues.map((item, idx) => {
+            const i = item.issue;
+            const statusIcon = i.status === 'resolved' ? '✅ ' : i.status === 'ignored' ? '🗑️ ' : '';
+            return {
+                title: `${statusIcon}${i.confidenceScore ? `[${i.confidenceScore}/5] ` : ''}${i.title} ${chalk.dim(`(${item.file})`)}`,
+                value: idx,
+                description: i.status ? `Marked as ${i.status}` : i.description.slice(0, 80)
+            };
+        });
+
+        choices.push({ title: '🚪 Finish Review', value: -1, description: 'Exit and save report' });
+
+        const { selectedIdx } = await prompts({
+            type: 'select',
+            name: 'selectedIdx',
+            message: 'Select an issue:',
+            choices: choices,
+            initial: 0
+        });
+
+        if (selectedIdx === undefined || selectedIdx === -1) {
+            active = false;
+            break;
+        }
+
+        const selected = flatIssues[selectedIdx];
+        const { issue, file } = selected;
+
+        // Show Details
+        console.log(chalk.cyan(`\nTitle: ${issue.title}`));
+        console.log(chalk.white(issue.description));
+        console.log(chalk.dim(`File: ${file}`));
+        if (issue.confidenceScore) console.log(chalk.yellow(`Confidence: ${issue.confidenceScore}/5`));
+        if (issue.status) console.log(chalk.green(`Status: ${issue.status}`));
+
+        // Action Menu
+        const action = await showActionMenu(issue.title);
+
+        if (action === 'discuss') {
+            const argument = await askForArgument();
+            const result = await debateIssue(
+                issue.title,
+                issue.description,
+                file,
+                argument,
+                index
+            );
+
+            console.log(chalk.yellow(`\n🤖 Bot: ${result.text}`));
+
+            if (result.severity === 'LGTM') {
+                console.log(chalk.green("✅ Issue withdrawn by AI!"));
+                // Direct update to our state
+                interactiveFindings[selected.fileIndex].issues[selected.issueIndex].status = 'resolved';
+                hasUpdates = true;
+            }
+
+        } else if (action === 'ignore') {
+            console.log(chalk.dim('Issue ignored locally.'));
+            interactiveFindings[selected.fileIndex].issues[selected.issueIndex].status = 'ignored';
+            hasUpdates = true;
+        } else if (action === 'accept') {
+            console.log(chalk.green('Issue accepted.'));
+        } else if (action === 'exit') {
+            active = false;
+        }
+    }
+
+    // Filter out resolved/ignored issues for the final report
+    const finalFindings: FileFinding[] = interactiveFindings.map(f => ({
+        ...f,
+        issues: f.issues.filter(i => i.status !== 'resolved' && i.status !== 'ignored')
+    })).filter(f => f.issues.length > 0);
+
+    return { updatedFindings: finalFindings, hasUpdates };
+}
+
+/**
+ * Headless interface for flatIssues structure
+ */
+interface FlatIssue {
+    id: number;
+    title: string;
+    description: string;
+    file: string;
+    confidenceScore?: number;
+    status?: 'resolved' | 'ignored';
+    fileIndex: number;
+    issueIndex: number;
+}
+
+/**
+ * Headless command protocol
+ */
+interface HeadlessCommand {
+    action: 'list' | 'debate' | 'ignore' | 'accept' | 'exit';
+    issueId?: number;
+    argument?: string;
+}
+
+/**
+ * Flatten findings into a simple array for headless mode
+ */
+function flattenIssues(findings: FileFinding[]): FlatIssue[] {
+    const flat: FlatIssue[] = [];
+    findings.forEach((f, fIdx) => {
+        f.issues.forEach((i, iIdx) => {
+            flat.push({
+                id: flat.length,
+                title: i.title,
+                description: i.description,
+                file: f.file,
+                confidenceScore: i.confidenceScore,
+                status: i.status,
+                fileIndex: fIdx,
+                issueIndex: iIdx
+            });
+        });
+    });
+    return flat;
+}
+
+/**
+ * Headless session for AI agents and CI/CD.
+ * 
+ * Protocol:
+ * - Input (stdin): JSON commands, one per line
+ *   { "action": "list" }
+ *   { "action": "debate", "issueId": 0, "argument": "This is intentional" }
+ *   { "action": "ignore", "issueId": 0 }
+ *   { "action": "accept", "issueId": 0 }
+ *   { "action": "exit" }
+ * 
+ * - Output (stdout): JSON events, one per line
+ *   { "type": "ready", "issues": [...] }
+ *   { "type": "list", "issues": [...] }
+ *   { "type": "response", "issueId": 0, "text": "...", "verdict": "LGTM" | "STANDS" }
+ *   { "type": "update", "issueId": 0, "status": "ignored" | "resolved" | "accepted" }
+ *   { "type": "error", "message": "..." }
+ *   { "type": "done", "hasUpdates": true, "updatedFindings": [...] }
+ */
+export async function startHeadlessSession(
+    findings: FileFinding[],
+    index: VectorStoreIndex
+): Promise<{ updatedFindings: FileFinding[], hasUpdates: boolean }> {
+
+    // Deep clone to track state
+    const sessionFindings: FileFinding[] = JSON.parse(JSON.stringify(findings));
+    let hasUpdates = false;
+
+    // Emit ready event with all issues
+    const issues = flattenIssues(sessionFindings);
+    Logger.json({ type: 'ready', issues });
+
+    // Create readline interface for stdin
+    const rl = readline.createInterface({
+        input: process.stdin,
+        output: process.stdout,
+        terminal: false
+    });
+
+    // Process commands
+    for await (const line of rl) {
+        if (!line.trim()) continue;
+
+        let cmd: HeadlessCommand;
+        try {
+            cmd = JSON.parse(line);
+        } catch (e) {
+            Logger.json({ type: 'error', message: 'Invalid JSON command' });
+            continue;
+        }
+
+        const currentIssues = flattenIssues(sessionFindings);
+
+        switch (cmd.action) {
+            case 'list':
+                Logger.json({ type: 'list', issues: currentIssues });
+                break;
+
+            case 'debate':
+                if (cmd.issueId === undefined || !cmd.argument) {
+                    Logger.json({ type: 'error', message: 'debate requires issueId and argument' });
+                    break;
+                }
+                const debateTarget = currentIssues.find(i => i.id === cmd.issueId);
+                if (!debateTarget) {
+                    Logger.json({ type: 'error', message: `Issue ${cmd.issueId} not found` });
+                    break;
+                }
+
+                try {
+                    const result = await debateIssue(
+                        debateTarget.title,
+                        debateTarget.description,
+                        debateTarget.file,
+                        cmd.argument,
+                        index
+                    );
+
+                    const verdict = result.severity === 'LGTM' ? 'LGTM' : 'STANDS';
+                    Logger.json({
+                        type: 'response',
+                        issueId: cmd.issueId,
+                        text: result.text,
+                        verdict
+                    });
+
+                    if (result.severity === 'LGTM') {
+                        sessionFindings[debateTarget.fileIndex].issues[debateTarget.issueIndex].status = 'resolved';
+                        hasUpdates = true;
+                        Logger.json({ type: 'update', issueId: cmd.issueId, status: 'resolved' });
+                    }
+                } catch (e: any) {
+                    Logger.json({ type: 'error', message: e.message });
+                }
+                break;
+
+            case 'ignore':
+                if (cmd.issueId === undefined) {
+                    Logger.json({ type: 'error', message: 'ignore requires issueId' });
+                    break;
+                }
+                const ignoreTarget = currentIssues.find(i => i.id === cmd.issueId);
+                if (!ignoreTarget) {
+                    Logger.json({ type: 'error', message: `Issue ${cmd.issueId} not found` });
+                    break;
+                }
+                sessionFindings[ignoreTarget.fileIndex].issues[ignoreTarget.issueIndex].status = 'ignored';
+                hasUpdates = true;
+                Logger.json({ type: 'update', issueId: cmd.issueId, status: 'ignored' });
+                break;
+
+            case 'accept':
+                if (cmd.issueId === undefined) {
+                    Logger.json({ type: 'error', message: 'accept requires issueId' });
+                    break;
+                }
+                Logger.json({ type: 'update', issueId: cmd.issueId, status: 'accepted' });
+                break;
+
+            case 'exit':
+                // Filter out resolved/ignored for final report
+                const finalFindings: FileFinding[] = sessionFindings.map(f => ({
+                    ...f,
+                    issues: f.issues.filter(i => i.status !== 'resolved' && i.status !== 'ignored')
+                })).filter(f => f.issues.length > 0);
+
+                Logger.json({ type: 'done', hasUpdates, updatedFindings: finalFindings });
+                rl.close();
+                return { updatedFindings: finalFindings, hasUpdates };
+
+            default:
+                Logger.json({ type: 'error', message: `Unknown action: ${(cmd as any).action}` });
+        }
+    }
+
+    // If stdin closes without exit command, still return
+    const finalFindings: FileFinding[] = sessionFindings.map(f => ({
+        ...f,
+        issues: f.issues.filter(i => i.status !== 'resolved' && i.status !== 'ignored')
+    })).filter(f => f.issues.length > 0);
+
+    return { updatedFindings: finalFindings, hasUpdates };
+}

package/scripts/types.ts

@@ -10,6 +10,8 @@ export interface ReviewIssue {
     description: string;
     line?: number;
     fixPrompt: string;
+    confidenceScore?: number;
+    status?: 'resolved' | 'ignored';
 }
 
 export interface FileFinding {
@@ -35,6 +37,12 @@ export interface DashboardReport {
     recommendedAction: string;
 }
 
+export interface SessionState {
+    date: string;
+    findings: FileFinding[];
+    metrics: DashboardReport['metrics'];
+}
+
 /**
  * Schema for LLM response (per-file review)
  */
@@ -45,6 +53,7 @@ export interface LLMReviewResponse {
         description: string;
         line?: number;
         fixPrompt: string;
+        confidenceScore?: number;  // 1-5 confidence rating
     }[];
 }