jcampconverter 9.0.5 → 9.0.7

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -1 +1 @@
1
- {"version":3,"file":"postProcessingNMR.d.ts","sourceRoot":"","sources":["../src/postProcessingNMR.js"],"names":[],"mappings":"AAEA,kEA4FC"}
1
+ {"version":3,"file":"postProcessingNMR.d.ts","sourceRoot":"","sources":["../src/postProcessingNMR.js"],"names":[],"mappings":"AAEA,kEAgGC"}
@@ -31,7 +31,7 @@ function postProcessingNMR(entriesFlat) {
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  }
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  }
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  }
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- if (shiftOffsetVal) {
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+ if (shiftOffsetVal && spectrum.xUnits.toLowerCase().includes('ppm')) {
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  let shift = spectrum.firstX - shiftOffsetVal;
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  spectrum.firstX = spectrum.firstX - shift;
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  spectrum.lastX = spectrum.lastX - shift;
@@ -44,23 +44,24 @@ function postProcessingNMR(entriesFlat) {
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  for (let i = 0; i < entry.ntuples.nucleus.length; i++) {
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  let symbol = entry.ntuples.symbol[i];
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  let nucleus = entry.ntuples.nucleus[i];
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- if (symbol.startsWith('F') && !nucleus) {
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- if (symbol === 'F1') {
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+ if (symbol.match(/^[F|T]/) && !nucleus) {
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+ if (symbol.match(/[F|T]1/)) {
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  // if F1 is defined we will use F2
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  if (entry.tmp.$NUC2) {
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  entry.ntuples.nucleus[i] = entry.tmp.$NUC2;
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  }
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  else {
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- let f2index = entry.ntuples.symbol.indexOf('F2');
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+ let f2index = entry.ntuples.symbol.indexOf(symbol.replace(/^([F|T]).*/, '$12'));
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  if (f2index && entry.ntuples.nucleus[f2index]) {
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  entry.ntuples.nucleus[i] = entry.ntuples.nucleus[f2index];
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  }
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  }
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  }
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- if (symbol === 'F2')
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+ if (symbol.match(/[F|T]2/)) {
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  entry.ntuples.nucleus[i] = entry.tmp.$NUC1;
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+ }
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  }
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- if (symbol === 'F2') {
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+ if (symbol.match(/[F|T]2/)) {
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  entry.yType = entry.ntuples.nucleus[0];
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  }
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  }
@@ -1 +1 @@
1
- {"version":3,"file":"postProcessingNMR.js","sourceRoot":"","sources":["../src/postProcessingNMR.js"],"names":[],"mappings":";;AAAA,2DAAuD;AAEvD,SAAwB,iBAAiB,CAAC,WAAW;IACnD,yBAAyB;IAEzB,KAAK,IAAI,KAAK,IAAI,WAAW,EAAE;QAC7B,IAAI,gBAAgB,GAAG,CAAC,CAAC;QACzB,IAAI,cAAc,GAAG,CAAC,CAAC;QACvB,KAAK,IAAI,QAAQ,IAAI,KAAK,CAAC,OAAO,EAAE;YAClC,IAAI,KAAK,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,EAAE;gBACzC,IAAI,CAAC,gBAAgB,IAAI,QAAQ,CAAC,gBAAgB,EAAE;oBAClD,gBAAgB,GAAG,QAAQ,CAAC,gBAAgB,CAAC;iBAC9C;gBACD,IAAI,CAAC,cAAc,IAAI,QAAQ,CAAC,cAAc,EAAE;oBAC9C,cAAc,GAAG,QAAQ,CAAC,cAAc,CAAC;iBAC1C;aACF;iBAAM;gBACL,gBAAgB,GAAG,QAAQ,CAAC,gBAAgB,CAAC;gBAC7C,cAAc,GAAG,QAAQ,CAAC,cAAc,CAAC;aAC1C;YAED,IAAI,gBAAgB,EAAE;gBACpB,IAAI,QAAQ,CAAC,MAAM,IAAI,QAAQ,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE;oBACnE,QAAQ,CAAC,MAAM,GAAG,KAAK,CAAC;oBACxB,QAAQ,CAAC,OAAO,GAAG,QAAQ,CAAC,OAAO,GAAG,gBAAgB,CAAC;oBACvD,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,gBAAgB,CAAC;oBACrD,QAAQ,CAAC,KAAK,GAAG,QAAQ,CAAC,KAAK,GAAG,gBAAgB,CAAC;oBACnD,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,gBAAgB,CAAC;oBACrD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;wBAC/C,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,gBAAgB,CAAC;qBACxC;iBACF;aACF;YACD,IAAI,cAAc,EAAE;gBAClB,IAAI,KAAK,GAAG,QAAQ,CAAC,MAAM,GAAG,cAAc,CAAC;gBAC7C,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,KAAK,CAAC;gBAC1C,QAAQ,CAAC,KAAK,GAAG,QAAQ,CAAC,KAAK,GAAG,KAAK,CAAC;gBACxC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBAC/C,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,KAAK,CAAC;iBAC7B;aACF;YAED,gDAAgD;YAChD,IAAI,KAAK,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,EAAE;gBAClE,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBACrD,IAAI,MAAM,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;oBACrC,IAAI,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;oBACvC,IAAI,MAAM,CAAC,UAAU,CAAC,GAAG,CAAC,IAAI,CAAC,OAAO,EAAE;wBACtC,IAAI,MAAM,KAAK,IAAI,EAAE;4BACnB,kCAAkC;4BAClC,IAAI,KAAK,CAAC,GAAG,CAAC,KAAK,EAAE;gCACnB,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC;6BAC5C;iCAAM;gCACL,IAAI,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;gCACjD,IAAI,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE;oCAC7C,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;iCAC3D;6BACF;yBACF;wBACD,IAAI,MAAM,KAAK,IAAI;4BAAE,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC;qBACjE;oBACD,IAAI,MAAM,KAAK,IAAI,EAAE;wBACnB,KAAK,CAAC,KAAK,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;qBACxC;iBACF;aACF;YAED,IACE,gBAAgB;gBAChB,KAAK,CAAC,OAAO;gBACb,KAAK,CAAC,OAAO,CAAC,MAAM;gBACpB,KAAK,CAAC,OAAO,CAAC,OAAO,EACrB;gBACA,IAAI,IAAI,GAAG,EAAE,CAAC;gBACd,IAAI,eAAe,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;gBACxE,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,EAAE;oBAC/D,IAAI,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,CAAC;iBAC7C;gBACD,IAAI,IAAI,KAAK,KAAK,EAAE;oBAClB,IAAI,eAAe,KAAK,CAAC,EAAE;wBACzB,MAAM,KAAK,CAAC,oCAAoC,CAAC,CAAC;qBACnD;oBAED,IAAI,MAAM,GAAG,sCAAiB,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;oBACzD,IAAI,MAAM,GAAG,sCAAiB,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;oBACzD,IAAI,CAAC,MAAM,IAAI,CAAC,MAAM,EAAE;wBACtB,MAAM,KAAK,CAAC,kDAAkD,CAAC,CAAC;qBACjE;oBACD,IAAI,KAAK,GAAG,CAAC,MAAM,GAAG,MAAM,CAAC,GAAG,gBAAgB,CAAC;oBACjD,QAAQ,CAAC,SAAS,IAAI,KAAK,CAAC;iBAC7B;aACF;SACF;KACF;AACH,CAAC;AA5FD,oCA4FC"}
1
+ {"version":3,"file":"postProcessingNMR.js","sourceRoot":"","sources":["../src/postProcessingNMR.js"],"names":[],"mappings":";;AAAA,2DAAuD;AAEvD,SAAwB,iBAAiB,CAAC,WAAW;IACnD,yBAAyB;IAEzB,KAAK,IAAI,KAAK,IAAI,WAAW,EAAE;QAC7B,IAAI,gBAAgB,GAAG,CAAC,CAAC;QACzB,IAAI,cAAc,GAAG,CAAC,CAAC;QACvB,KAAK,IAAI,QAAQ,IAAI,KAAK,CAAC,OAAO,EAAE;YAClC,IAAI,KAAK,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,EAAE;gBACzC,IAAI,CAAC,gBAAgB,IAAI,QAAQ,CAAC,gBAAgB,EAAE;oBAClD,gBAAgB,GAAG,QAAQ,CAAC,gBAAgB,CAAC;iBAC9C;gBACD,IAAI,CAAC,cAAc,IAAI,QAAQ,CAAC,cAAc,EAAE;oBAC9C,cAAc,GAAG,QAAQ,CAAC,cAAc,CAAC;iBAC1C;aACF;iBAAM;gBACL,gBAAgB,GAAG,QAAQ,CAAC,gBAAgB,CAAC;gBAC7C,cAAc,GAAG,QAAQ,CAAC,cAAc,CAAC;aAC1C;YAED,IAAI,gBAAgB,EAAE;gBACpB,IAAI,QAAQ,CAAC,MAAM,IAAI,QAAQ,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE;oBACnE,QAAQ,CAAC,MAAM,GAAG,KAAK,CAAC;oBACxB,QAAQ,CAAC,OAAO,GAAG,QAAQ,CAAC,OAAO,GAAG,gBAAgB,CAAC;oBACvD,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,gBAAgB,CAAC;oBACrD,QAAQ,CAAC,KAAK,GAAG,QAAQ,CAAC,KAAK,GAAG,gBAAgB,CAAC;oBACnD,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,gBAAgB,CAAC;oBACrD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;wBAC/C,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,gBAAgB,CAAC;qBACxC;iBACF;aACF;YACD,IAAI,cAAc,IAAI,QAAQ,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBACnE,IAAI,KAAK,GAAG,QAAQ,CAAC,MAAM,GAAG,cAAc,CAAC;gBAC7C,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,KAAK,CAAC;gBAC1C,QAAQ,CAAC,KAAK,GAAG,QAAQ,CAAC,KAAK,GAAG,KAAK,CAAC;gBACxC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBAC/C,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,KAAK,CAAC;iBAC7B;aACF;YAED,gDAAgD;YAChD,IAAI,KAAK,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,EAAE;gBAClE,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBACrD,IAAI,MAAM,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;oBACrC,IAAI,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;oBACvC,IAAI,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,OAAO,EAAE;wBACtC,IAAI,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,EAAE;4BAC1B,kCAAkC;4BAClC,IAAI,KAAK,CAAC,GAAG,CAAC,KAAK,EAAE;gCACnB,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC;6BAC5C;iCAAM;gCACL,IAAI,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CACxC,MAAM,CAAC,OAAO,CAAC,YAAY,EAAE,KAAK,CAAC,CACpC,CAAC;gCACF,IAAI,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE;oCAC7C,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;iCAC3D;6BACF;yBACF;wBACD,IAAI,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,EAAE;4BAC1B,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC;yBAC5C;qBACF;oBACD,IAAI,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,EAAE;wBAC1B,KAAK,CAAC,KAAK,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;qBACxC;iBACF;aACF;YAED,IACE,gBAAgB;gBAChB,KAAK,CAAC,OAAO;gBACb,KAAK,CAAC,OAAO,CAAC,MAAM;gBACpB,KAAK,CAAC,OAAO,CAAC,OAAO,EACrB;gBACA,IAAI,IAAI,GAAG,EAAE,CAAC;gBACd,IAAI,eAAe,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;gBACxE,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,EAAE;oBAC/D,IAAI,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,CAAC;iBAC7C;gBACD,IAAI,IAAI,KAAK,KAAK,EAAE;oBAClB,IAAI,eAAe,KAAK,CAAC,EAAE;wBACzB,MAAM,KAAK,CAAC,oCAAoC,CAAC,CAAC;qBACnD;oBAED,IAAI,MAAM,GAAG,sCAAiB,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;oBACzD,IAAI,MAAM,GAAG,sCAAiB,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;oBACzD,IAAI,CAAC,MAAM,IAAI,CAAC,MAAM,EAAE;wBACtB,MAAM,KAAK,CAAC,kDAAkD,CAAC,CAAC;qBACjE;oBACD,IAAI,KAAK,GAAG,CAAC,MAAM,GAAG,MAAM,CAAC,GAAG,gBAAgB,CAAC;oBACjD,QAAQ,CAAC,SAAS,IAAI,KAAK,CAAC;iBAC7B;aACF;SACF;KACF;AACH,CAAC;AAhGD,oCAgGC"}
@@ -1 +1 @@
1
- {"version":3,"file":"postProcessingNMR.d.ts","sourceRoot":"","sources":["../src/postProcessingNMR.js"],"names":[],"mappings":"AAEA,kEA4FC"}
1
+ {"version":3,"file":"postProcessingNMR.d.ts","sourceRoot":"","sources":["../src/postProcessingNMR.js"],"names":[],"mappings":"AAEA,kEAgGC"}
@@ -29,7 +29,7 @@ export default function postProcessingNMR(entriesFlat) {
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  }
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  }
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  }
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- if (shiftOffsetVal) {
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+ if (shiftOffsetVal && spectrum.xUnits.toLowerCase().includes('ppm')) {
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  let shift = spectrum.firstX - shiftOffsetVal;
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  spectrum.firstX = spectrum.firstX - shift;
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  spectrum.lastX = spectrum.lastX - shift;
@@ -42,23 +42,24 @@ export default function postProcessingNMR(entriesFlat) {
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  for (let i = 0; i < entry.ntuples.nucleus.length; i++) {
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  let symbol = entry.ntuples.symbol[i];
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  let nucleus = entry.ntuples.nucleus[i];
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- if (symbol.startsWith('F') && !nucleus) {
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- if (symbol === 'F1') {
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+ if (symbol.match(/^[F|T]/) && !nucleus) {
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+ if (symbol.match(/[F|T]1/)) {
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  // if F1 is defined we will use F2
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  if (entry.tmp.$NUC2) {
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  entry.ntuples.nucleus[i] = entry.tmp.$NUC2;
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  }
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  else {
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- let f2index = entry.ntuples.symbol.indexOf('F2');
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+ let f2index = entry.ntuples.symbol.indexOf(symbol.replace(/^([F|T]).*/, '$12'));
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  if (f2index && entry.ntuples.nucleus[f2index]) {
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  entry.ntuples.nucleus[i] = entry.ntuples.nucleus[f2index];
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  }
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  }
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  }
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- if (symbol === 'F2')
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+ if (symbol.match(/[F|T]2/)) {
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  entry.ntuples.nucleus[i] = entry.tmp.$NUC1;
60
+ }
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  }
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- if (symbol === 'F2') {
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+ if (symbol.match(/[F|T]2/)) {
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  entry.yType = entry.ntuples.nucleus[0];
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  }
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  }
@@ -1 +1 @@
1
- {"version":3,"file":"postProcessingNMR.js","sourceRoot":"","sources":["../src/postProcessingNMR.js"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAC;AAEvD,MAAM,CAAC,OAAO,UAAU,iBAAiB,CAAC,WAAW;IACnD,yBAAyB;IAEzB,KAAK,IAAI,KAAK,IAAI,WAAW,EAAE;QAC7B,IAAI,gBAAgB,GAAG,CAAC,CAAC;QACzB,IAAI,cAAc,GAAG,CAAC,CAAC;QACvB,KAAK,IAAI,QAAQ,IAAI,KAAK,CAAC,OAAO,EAAE;YAClC,IAAI,KAAK,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,EAAE;gBACzC,IAAI,CAAC,gBAAgB,IAAI,QAAQ,CAAC,gBAAgB,EAAE;oBAClD,gBAAgB,GAAG,QAAQ,CAAC,gBAAgB,CAAC;iBAC9C;gBACD,IAAI,CAAC,cAAc,IAAI,QAAQ,CAAC,cAAc,EAAE;oBAC9C,cAAc,GAAG,QAAQ,CAAC,cAAc,CAAC;iBAC1C;aACF;iBAAM;gBACL,gBAAgB,GAAG,QAAQ,CAAC,gBAAgB,CAAC;gBAC7C,cAAc,GAAG,QAAQ,CAAC,cAAc,CAAC;aAC1C;YAED,IAAI,gBAAgB,EAAE;gBACpB,IAAI,QAAQ,CAAC,MAAM,IAAI,QAAQ,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE;oBACnE,QAAQ,CAAC,MAAM,GAAG,KAAK,CAAC;oBACxB,QAAQ,CAAC,OAAO,GAAG,QAAQ,CAAC,OAAO,GAAG,gBAAgB,CAAC;oBACvD,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,gBAAgB,CAAC;oBACrD,QAAQ,CAAC,KAAK,GAAG,QAAQ,CAAC,KAAK,GAAG,gBAAgB,CAAC;oBACnD,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,gBAAgB,CAAC;oBACrD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;wBAC/C,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,gBAAgB,CAAC;qBACxC;iBACF;aACF;YACD,IAAI,cAAc,EAAE;gBAClB,IAAI,KAAK,GAAG,QAAQ,CAAC,MAAM,GAAG,cAAc,CAAC;gBAC7C,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,KAAK,CAAC;gBAC1C,QAAQ,CAAC,KAAK,GAAG,QAAQ,CAAC,KAAK,GAAG,KAAK,CAAC;gBACxC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBAC/C,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,KAAK,CAAC;iBAC7B;aACF;YAED,gDAAgD;YAChD,IAAI,KAAK,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,EAAE;gBAClE,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBACrD,IAAI,MAAM,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;oBACrC,IAAI,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;oBACvC,IAAI,MAAM,CAAC,UAAU,CAAC,GAAG,CAAC,IAAI,CAAC,OAAO,EAAE;wBACtC,IAAI,MAAM,KAAK,IAAI,EAAE;4BACnB,kCAAkC;4BAClC,IAAI,KAAK,CAAC,GAAG,CAAC,KAAK,EAAE;gCACnB,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC;6BAC5C;iCAAM;gCACL,IAAI,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;gCACjD,IAAI,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE;oCAC7C,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;iCAC3D;6BACF;yBACF;wBACD,IAAI,MAAM,KAAK,IAAI;4BAAE,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC;qBACjE;oBACD,IAAI,MAAM,KAAK,IAAI,EAAE;wBACnB,KAAK,CAAC,KAAK,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;qBACxC;iBACF;aACF;YAED,IACE,gBAAgB;gBAChB,KAAK,CAAC,OAAO;gBACb,KAAK,CAAC,OAAO,CAAC,MAAM;gBACpB,KAAK,CAAC,OAAO,CAAC,OAAO,EACrB;gBACA,IAAI,IAAI,GAAG,EAAE,CAAC;gBACd,IAAI,eAAe,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;gBACxE,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,EAAE;oBAC/D,IAAI,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,CAAC;iBAC7C;gBACD,IAAI,IAAI,KAAK,KAAK,EAAE;oBAClB,IAAI,eAAe,KAAK,CAAC,EAAE;wBACzB,MAAM,KAAK,CAAC,oCAAoC,CAAC,CAAC;qBACnD;oBAED,IAAI,MAAM,GAAG,iBAAiB,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;oBACzD,IAAI,MAAM,GAAG,iBAAiB,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;oBACzD,IAAI,CAAC,MAAM,IAAI,CAAC,MAAM,EAAE;wBACtB,MAAM,KAAK,CAAC,kDAAkD,CAAC,CAAC;qBACjE;oBACD,IAAI,KAAK,GAAG,CAAC,MAAM,GAAG,MAAM,CAAC,GAAG,gBAAgB,CAAC;oBACjD,QAAQ,CAAC,SAAS,IAAI,KAAK,CAAC;iBAC7B;aACF;SACF;KACF;AACH,CAAC"}
1
+ {"version":3,"file":"postProcessingNMR.js","sourceRoot":"","sources":["../src/postProcessingNMR.js"],"names":[],"mappings":"AAAA,OAAO,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAC;AAEvD,MAAM,CAAC,OAAO,UAAU,iBAAiB,CAAC,WAAW;IACnD,yBAAyB;IAEzB,KAAK,IAAI,KAAK,IAAI,WAAW,EAAE;QAC7B,IAAI,gBAAgB,GAAG,CAAC,CAAC;QACzB,IAAI,cAAc,GAAG,CAAC,CAAC;QACvB,KAAK,IAAI,QAAQ,IAAI,KAAK,CAAC,OAAO,EAAE;YAClC,IAAI,KAAK,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,EAAE;gBACzC,IAAI,CAAC,gBAAgB,IAAI,QAAQ,CAAC,gBAAgB,EAAE;oBAClD,gBAAgB,GAAG,QAAQ,CAAC,gBAAgB,CAAC;iBAC9C;gBACD,IAAI,CAAC,cAAc,IAAI,QAAQ,CAAC,cAAc,EAAE;oBAC9C,cAAc,GAAG,QAAQ,CAAC,cAAc,CAAC;iBAC1C;aACF;iBAAM;gBACL,gBAAgB,GAAG,QAAQ,CAAC,gBAAgB,CAAC;gBAC7C,cAAc,GAAG,QAAQ,CAAC,cAAc,CAAC;aAC1C;YAED,IAAI,gBAAgB,EAAE;gBACpB,IAAI,QAAQ,CAAC,MAAM,IAAI,QAAQ,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,IAAI,CAAC,EAAE;oBACnE,QAAQ,CAAC,MAAM,GAAG,KAAK,CAAC;oBACxB,QAAQ,CAAC,OAAO,GAAG,QAAQ,CAAC,OAAO,GAAG,gBAAgB,CAAC;oBACvD,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,gBAAgB,CAAC;oBACrD,QAAQ,CAAC,KAAK,GAAG,QAAQ,CAAC,KAAK,GAAG,gBAAgB,CAAC;oBACnD,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,gBAAgB,CAAC;oBACrD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;wBAC/C,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,gBAAgB,CAAC;qBACxC;iBACF;aACF;YACD,IAAI,cAAc,IAAI,QAAQ,CAAC,MAAM,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE;gBACnE,IAAI,KAAK,GAAG,QAAQ,CAAC,MAAM,GAAG,cAAc,CAAC;gBAC7C,QAAQ,CAAC,MAAM,GAAG,QAAQ,CAAC,MAAM,GAAG,KAAK,CAAC;gBAC1C,QAAQ,CAAC,KAAK,GAAG,QAAQ,CAAC,KAAK,GAAG,KAAK,CAAC;gBACxC,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBAC/C,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,KAAK,CAAC;iBAC7B;aACF;YAED,gDAAgD;YAChD,IAAI,KAAK,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,EAAE;gBAClE,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBACrD,IAAI,MAAM,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,CAAC,CAAC,CAAC;oBACrC,IAAI,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;oBACvC,IAAI,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,IAAI,CAAC,OAAO,EAAE;wBACtC,IAAI,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,EAAE;4BAC1B,kCAAkC;4BAClC,IAAI,KAAK,CAAC,GAAG,CAAC,KAAK,EAAE;gCACnB,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC;6BAC5C;iCAAM;gCACL,IAAI,OAAO,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CACxC,MAAM,CAAC,OAAO,CAAC,YAAY,EAAE,KAAK,CAAC,CACpC,CAAC;gCACF,IAAI,OAAO,IAAI,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,OAAO,CAAC,EAAE;oCAC7C,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC;iCAC3D;6BACF;yBACF;wBACD,IAAI,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,EAAE;4BAC1B,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC;yBAC5C;qBACF;oBACD,IAAI,MAAM,CAAC,KAAK,CAAC,QAAQ,CAAC,EAAE;wBAC1B,KAAK,CAAC,KAAK,GAAG,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;qBACxC;iBACF;aACF;YAED,IACE,gBAAgB;gBAChB,KAAK,CAAC,OAAO;gBACb,KAAK,CAAC,OAAO,CAAC,MAAM;gBACpB,KAAK,CAAC,OAAO,CAAC,OAAO,EACrB;gBACA,IAAI,IAAI,GAAG,EAAE,CAAC;gBACd,IAAI,eAAe,GAAG,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,OAAO,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC;gBACxE,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,IAAI,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,EAAE;oBAC/D,IAAI,GAAG,KAAK,CAAC,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,CAAC;iBAC7C;gBACD,IAAI,IAAI,KAAK,KAAK,EAAE;oBAClB,IAAI,eAAe,KAAK,CAAC,EAAE;wBACzB,MAAM,KAAK,CAAC,oCAAoC,CAAC,CAAC;qBACnD;oBAED,IAAI,MAAM,GAAG,iBAAiB,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;oBACzD,IAAI,MAAM,GAAG,iBAAiB,CAAC,KAAK,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;oBACzD,IAAI,CAAC,MAAM,IAAI,CAAC,MAAM,EAAE;wBACtB,MAAM,KAAK,CAAC,kDAAkD,CAAC,CAAC;qBACjE;oBACD,IAAI,KAAK,GAAG,CAAC,MAAM,GAAG,MAAM,CAAC,GAAG,gBAAgB,CAAC;oBACjD,QAAQ,CAAC,SAAS,IAAI,KAAK,CAAC;iBAC7B;aACF;SACF;KACF;AACH,CAAC"}
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "jcampconverter",
3
- "version": "9.0.5",
3
+ "version": "9.0.7",
4
4
  "description": "Parse and convert JCAMP data",
5
5
  "main": "lib/index.js",
6
6
  "module": "lib-esm/index.js",
@@ -31,7 +31,7 @@ export default function postProcessingNMR(entriesFlat) {
31
31
  }
32
32
  }
33
33
  }
34
- if (shiftOffsetVal) {
34
+ if (shiftOffsetVal && spectrum.xUnits.toLowerCase().includes('ppm')) {
35
35
  let shift = spectrum.firstX - shiftOffsetVal;
36
36
  spectrum.firstX = spectrum.firstX - shift;
37
37
  spectrum.lastX = spectrum.lastX - shift;
@@ -45,21 +45,25 @@ export default function postProcessingNMR(entriesFlat) {
45
45
  for (let i = 0; i < entry.ntuples.nucleus.length; i++) {
46
46
  let symbol = entry.ntuples.symbol[i];
47
47
  let nucleus = entry.ntuples.nucleus[i];
48
- if (symbol.startsWith('F') && !nucleus) {
49
- if (symbol === 'F1') {
48
+ if (symbol.match(/^[F|T]/) && !nucleus) {
49
+ if (symbol.match(/[F|T]1/)) {
50
50
  // if F1 is defined we will use F2
51
51
  if (entry.tmp.$NUC2) {
52
52
  entry.ntuples.nucleus[i] = entry.tmp.$NUC2;
53
53
  } else {
54
- let f2index = entry.ntuples.symbol.indexOf('F2');
54
+ let f2index = entry.ntuples.symbol.indexOf(
55
+ symbol.replace(/^([F|T]).*/, '$12'),
56
+ );
55
57
  if (f2index && entry.ntuples.nucleus[f2index]) {
56
58
  entry.ntuples.nucleus[i] = entry.ntuples.nucleus[f2index];
57
59
  }
58
60
  }
59
61
  }
60
- if (symbol === 'F2') entry.ntuples.nucleus[i] = entry.tmp.$NUC1;
62
+ if (symbol.match(/[F|T]2/)) {
63
+ entry.ntuples.nucleus[i] = entry.tmp.$NUC1;
64
+ }
61
65
  }
62
- if (symbol === 'F2') {
66
+ if (symbol.match(/[F|T]2/)) {
63
67
  entry.yType = entry.ntuples.nucleus[0];
64
68
  }
65
69
  }