jbrowse-plugin-msaview 5.1.1 → 5.3.0

package/dist/chunks/{LaunchMsaViewDialog-C53VHT52.js → LaunchMsaViewDialog-R6CNRASN.js}

@@ -1,5 +1,5 @@
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+`)??"",[$]),J=Me(ue,I),Pe=vo(J,`${F??""}_${c[0]??""}`),er=M??x??P.error??l;return T.default.createElement(T.default.Fragment,null,T.default.createElement(Y,{error:er},T.default.createElement(g,{select:!0,label:"Select MSA dataset",value:m,onChange:B=>{b(B.target.value)}},d?.map(B=>T.default.createElement(Re.MenuItem,{key:B.datasetId,value:B.datasetId},B.name))),S?T.default.createElement("div",{className:i.selectedContainer},!j&&_?T.default.createElement(Ce.LoadingEllipses,{variant:"h6",message:`Loading MSA for ${fe(C)||F}`}):null,j?T.default.createElement(Ce.LoadingEllipses,{variant:"h6",message:`Loading available MSAs for (${S.name})`}):null,v?T.default.createElement("div",null,T.default.createElement(Ce.SanitizedHTML,{html:S.description}),T.default.createElement(R,{feature:t,...P}),ue?T.default.createElement(he,{...J,querySeqName:Pe}):null):null):null),T.default.createElement(X,{model:e,hint:_?T.default.createElement(Ce.LoadingEllipses,{message:"Loading alignment"}):$?.length&&!Pe?T.default.createElement(Re.Typography,{color:"textSecondary",variant:"body2"},"no row matches this transcript"):T.default.createElement(ie,{status:k}),submitDisabled:!C||!$?.length||!Pe,onSubmit:B=>{C&&ue&&p(()=>Q({view:a,feature:C,placement:B,displayName:te(C),drawNodeBubbles:!1,labelsAlignRight:!0,showBranchLen:!1,colWidth:10,rowHeight:12,colorSchemeName:"percent_identity_dynamic",querySeqName:Pe,querySeqOffset:J.querySeqOffset,data:{msa:ue}}))},onCancel:o}))}),Xo=Wr;var et=s(f());function Le({children:e,value:t,index:o}){let r=t===o,[n,a]=(0,et.useState)(r);return r&&!n&&a(!0),et.default.createElement("div",{role:"tabpanel",hidden:!r},n||r?e:null)}function Ur({handleClose:e,feature:t,model:o,preferredTranscriptId:r}){let n=(0,Ro.getSession)(o),i=!!Xe(n.jbrowse)?.length,[u,c]=(0,A.useState)("orthologs");return A.default.createElement(Zo.Dialog,{maxWidth:"xl",title:"Launch MSA view",open:!0,onClose:e},A.default.createElement(Wt,null,A.default.createElement("div",{style:{display:"flex",alignItems:"center"}},A.default.createElement(ye.Tabs,{value:u,onChange:(l,p)=>{c(p)}},A.default.createElement(ye.Tab,{label:"Orthologs",value:"orthologs"}),A.default.createElement(ye.Tab,{label:"BLAST query",value:"ncbi_blast"}),i?A.default.createElement(ye.Tab,{label:"Pre-loaded MSA datasets",value:"preloaded_msa"}):null,A.default.createElement(ye.Tab,{label:"Manual upload",value:"manual_msa"})),A.default.createElement(ct,null)),A.default.createElement(Le,{value:u,index:"orthologs"},A.default.createElement(Vo,{handleClose:e,feature:t,model:o,preferredTranscriptId:r})),A.default.createElement(Le,{value:u,index:"ncbi_blast"},A.default.createElement(ut,{handleClose:e,feature:t,model:o,preferredTranscriptId:r})),i?A.default.createElement(Le,{value:u,index:"preloaded_msa"},A.default.createElement(Xo,{model:o,feature:t,handleClose:e,preferredTranscriptId:r})):null,A.default.createElement(Le,{value:u,index:"manual_msa"},A.default.createElement(Po,{model:o,feature:t,handleClose:e,preferredTranscriptId:r}))))}export{Ur as default};
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