jbrowse-plugin-msaview 2.4.4 → 2.4.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/AddHighlightModel/GenomeMouseoverHighlight.js +2 -2
- package/dist/AddHighlightModel/HighlightComponents.js +0 -1
- package/dist/AddHighlightModel/MsaToGenomeHighlight.js +5 -3
- package/dist/AddHighlightModel/index.js +2 -2
- package/dist/AddHighlightModel/util.d.ts +1 -6
- package/dist/AddHighlightModel/util.js +1 -7
- package/dist/BgzipFastaMsaAdapter/BgzipFastaMsaAdapter.js +0 -1
- package/dist/BgzipFastaMsaAdapter/configSchema.js +0 -1
- package/dist/BgzipFastaMsaAdapter/index.js +0 -1
- package/dist/LaunchMsaView/components/LaunchMsaViewDialog.js +0 -1
- package/dist/LaunchMsaView/components/LaunchPanelContent.js +0 -1
- package/dist/LaunchMsaView/components/ManualMSALoader/ManualMSALoader.js +0 -1
- package/dist/LaunchMsaView/components/ManualMSALoader/fetchGeneList.js +0 -1
- package/dist/LaunchMsaView/components/ManualMSALoader/launchView.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/CachedBlastResults.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/MsaAlgorithmSelect.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastAutomaticPanel.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastManualPanel.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastMethodSelector.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastPanel.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastRIDPanel.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBISettingsDialog.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/blastLaunchView.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/consts.js +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/useCachedBlastResults.js +0 -1
- package/dist/LaunchMsaView/components/PreLoadedMSA/PreLoadedMSADataPanel.js +0 -1
- package/dist/LaunchMsaView/components/PreLoadedMSA/fetchMSAData.js +0 -1
- package/dist/LaunchMsaView/components/PreLoadedMSA/preCalculatedLaunchView.js +0 -1
- package/dist/LaunchMsaView/components/PreLoadedMSA/types.js +0 -1
- package/dist/LaunchMsaView/components/SubmitCancelActions.js +0 -1
- package/dist/LaunchMsaView/components/TabPanel.js +1 -2
- package/dist/LaunchMsaView/components/TranscriptSelector.js +0 -1
- package/dist/LaunchMsaView/components/calculateProteinSequence.js +0 -1
- package/dist/LaunchMsaView/components/fetchSeq.js +0 -1
- package/dist/LaunchMsaView/components/types.js +0 -1
- package/dist/LaunchMsaView/components/useFeatureSequence.js +0 -1
- package/dist/LaunchMsaView/components/useSWRFeatureSequence.js +0 -1
- package/dist/LaunchMsaView/components/useTranscriptSelection.js +0 -1
- package/dist/LaunchMsaView/components/util.js +0 -1
- package/dist/LaunchMsaView/index.js +0 -1
- package/dist/LaunchMsaView/util.js +0 -1
- package/dist/LaunchMsaViewExtensionPoint/index.js +0 -1
- package/dist/MsaViewPanel/afterCreateAutoruns.d.ts +0 -1
- package/dist/MsaViewPanel/afterCreateAutoruns.js +4 -22
- package/dist/MsaViewPanel/blosum62.js +0 -1
- package/dist/MsaViewPanel/components/ConnectStructureDialog.js +0 -1
- package/dist/MsaViewPanel/components/ErrorBoundary.d.ts +1 -1
- package/dist/MsaViewPanel/components/ErrorBoundary.js +0 -1
- package/dist/MsaViewPanel/components/LoadingBLAST.js +0 -1
- package/dist/MsaViewPanel/components/MsaViewPanel.js +0 -1
- package/dist/MsaViewPanel/components/RIDLink.js +0 -1
- package/dist/MsaViewPanel/doLaunchBlast.js +0 -1
- package/dist/MsaViewPanel/genomeToMSA.d.ts +0 -6
- package/dist/MsaViewPanel/genomeToMSA.js +8 -30
- package/dist/MsaViewPanel/genomeToMSA.test.js +0 -1
- package/dist/MsaViewPanel/index.js +0 -1
- package/dist/MsaViewPanel/model.d.ts +8 -18
- package/dist/MsaViewPanel/model.js +21 -32
- package/dist/MsaViewPanel/msaCoordToGenomeCoord.js +5 -22
- package/dist/MsaViewPanel/msaCoordToGenomeCoord.test.js +0 -1
- package/dist/MsaViewPanel/msaDataStore.js +0 -1
- package/dist/MsaViewPanel/pairwiseAlignment.js +0 -1
- package/dist/MsaViewPanel/pairwiseAlignment.test.js +0 -1
- package/dist/MsaViewPanel/structureConnection.js +0 -1
- package/dist/MsaViewPanel/structureConnection.test.js +0 -1
- package/dist/MsaViewPanel/types.js +0 -1
- package/dist/MsaViewPanel/util.d.ts +1 -3
- package/dist/MsaViewPanel/util.js +1 -3
- package/dist/components/ExternalLink.js +0 -1
- package/dist/components/ReadOnlyTextField2.js +0 -1
- package/dist/components/TextField2.js +0 -1
- package/dist/index.js +0 -1
- package/dist/jbrowse-plugin-msaview.umd.production.min.js +37 -37
- package/dist/jbrowse-plugin-msaview.umd.production.min.js.map +4 -4
- package/dist/utils/blastCache.js +2 -5
- package/dist/utils/fetch.js +0 -1
- package/dist/utils/msa.js +0 -1
- package/dist/utils/ncbiBlast.js +0 -1
- package/dist/utils/swrConfig.js +0 -1
- package/dist/utils/taxonomyNames.js +0 -1
- package/dist/utils/types.js +0 -1
- package/dist/version.d.ts +1 -1
- package/dist/version.js +1 -2
- package/package.json +4 -4
- package/src/AddHighlightModel/GenomeMouseoverHighlight.tsx +4 -1
- package/src/AddHighlightModel/MsaToGenomeHighlight.tsx +5 -8
- package/src/AddHighlightModel/index.tsx +4 -1
- package/src/AddHighlightModel/util.ts +1 -10
- package/src/LaunchMsaView/components/TabPanel.tsx +1 -1
- package/src/MsaViewPanel/afterCreateAutoruns.ts +4 -23
- package/src/MsaViewPanel/genomeToMSA.ts +10 -29
- package/src/MsaViewPanel/model.ts +26 -33
- package/src/MsaViewPanel/msaCoordToGenomeCoord.ts +5 -21
- package/src/MsaViewPanel/util.ts +3 -7
- package/src/utils/blastCache.ts +2 -4
- package/src/version.ts +1 -1
- package/dist/AddHighlightModel/GenomeMouseoverHighlight.js.map +0 -1
- package/dist/AddHighlightModel/HighlightComponents.js.map +0 -1
- package/dist/AddHighlightModel/MsaToGenomeHighlight.js.map +0 -1
- package/dist/AddHighlightModel/index.js.map +0 -1
- package/dist/AddHighlightModel/util.js.map +0 -1
- package/dist/BgzipFastaMsaAdapter/BgzipFastaMsaAdapter.js.map +0 -1
- package/dist/BgzipFastaMsaAdapter/configSchema.js.map +0 -1
- package/dist/BgzipFastaMsaAdapter/index.js.map +0 -1
- package/dist/LaunchMsaView/components/LaunchMsaViewDialog.js.map +0 -1
- package/dist/LaunchMsaView/components/LaunchPanelContent.js.map +0 -1
- package/dist/LaunchMsaView/components/ManualMSALoader/ManualMSALoader.js.map +0 -1
- package/dist/LaunchMsaView/components/ManualMSALoader/fetchGeneList.js.map +0 -1
- package/dist/LaunchMsaView/components/ManualMSALoader/launchView.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/CachedBlastResults.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/MsaAlgorithmSelect.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastAutomaticPanel.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastManualPanel.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastMethodSelector.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastPanel.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastRIDPanel.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBISettingsDialog.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/blastLaunchView.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/consts.js.map +0 -1
- package/dist/LaunchMsaView/components/NCBIBlastQuery/useCachedBlastResults.js.map +0 -1
- package/dist/LaunchMsaView/components/PreLoadedMSA/PreLoadedMSADataPanel.js.map +0 -1
- package/dist/LaunchMsaView/components/PreLoadedMSA/fetchMSAData.js.map +0 -1
- package/dist/LaunchMsaView/components/PreLoadedMSA/preCalculatedLaunchView.js.map +0 -1
- package/dist/LaunchMsaView/components/PreLoadedMSA/types.js.map +0 -1
- package/dist/LaunchMsaView/components/SubmitCancelActions.js.map +0 -1
- package/dist/LaunchMsaView/components/TabPanel.js.map +0 -1
- package/dist/LaunchMsaView/components/TranscriptSelector.js.map +0 -1
- package/dist/LaunchMsaView/components/calculateProteinSequence.js.map +0 -1
- package/dist/LaunchMsaView/components/fetchSeq.js.map +0 -1
- package/dist/LaunchMsaView/components/types.js.map +0 -1
- package/dist/LaunchMsaView/components/useFeatureSequence.js.map +0 -1
- package/dist/LaunchMsaView/components/useSWRFeatureSequence.js.map +0 -1
- package/dist/LaunchMsaView/components/useTranscriptSelection.js.map +0 -1
- package/dist/LaunchMsaView/components/util.js.map +0 -1
- package/dist/LaunchMsaView/index.js.map +0 -1
- package/dist/LaunchMsaView/util.js.map +0 -1
- package/dist/LaunchMsaViewExtensionPoint/index.js.map +0 -1
- package/dist/MsaViewPanel/afterCreateAutoruns.js.map +0 -1
- package/dist/MsaViewPanel/blosum62.js.map +0 -1
- package/dist/MsaViewPanel/components/ConnectStructureDialog.js.map +0 -1
- package/dist/MsaViewPanel/components/ErrorBoundary.js.map +0 -1
- package/dist/MsaViewPanel/components/LoadingBLAST.js.map +0 -1
- package/dist/MsaViewPanel/components/MsaViewPanel.js.map +0 -1
- package/dist/MsaViewPanel/components/RIDLink.js.map +0 -1
- package/dist/MsaViewPanel/doLaunchBlast.js.map +0 -1
- package/dist/MsaViewPanel/genomeToMSA.js.map +0 -1
- package/dist/MsaViewPanel/genomeToMSA.test.js.map +0 -1
- package/dist/MsaViewPanel/index.js.map +0 -1
- package/dist/MsaViewPanel/model.js.map +0 -1
- package/dist/MsaViewPanel/msaCoordToGenomeCoord.js.map +0 -1
- package/dist/MsaViewPanel/msaCoordToGenomeCoord.test.js.map +0 -1
- package/dist/MsaViewPanel/msaDataStore.js.map +0 -1
- package/dist/MsaViewPanel/pairwiseAlignment.js.map +0 -1
- package/dist/MsaViewPanel/pairwiseAlignment.test.js.map +0 -1
- package/dist/MsaViewPanel/structureConnection.js.map +0 -1
- package/dist/MsaViewPanel/structureConnection.test.js.map +0 -1
- package/dist/MsaViewPanel/types.js.map +0 -1
- package/dist/MsaViewPanel/util.js.map +0 -1
- package/dist/components/ExternalLink.js.map +0 -1
- package/dist/components/ReadOnlyTextField2.js.map +0 -1
- package/dist/components/TextField2.js.map +0 -1
- package/dist/index.js.map +0 -1
- package/dist/utils/blastCache.js.map +0 -1
- package/dist/utils/fetch.js.map +0 -1
- package/dist/utils/msa.js.map +0 -1
- package/dist/utils/ncbiBlast.js.map +0 -1
- package/dist/utils/swrConfig.js.map +0 -1
- package/dist/utils/taxonomyNames.js.map +0 -1
- package/dist/utils/types.js.map +0 -1
- package/dist/version.js.map +0 -1
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@@ -1 +0,0 @@
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1
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