jbrowse-plugin-msaview 2.4.2 → 2.4.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (71) hide show
  1. package/dist/LaunchMsaView/components/LaunchMsaViewDialog.js +3 -4
  2. package/dist/LaunchMsaView/components/LaunchMsaViewDialog.js.map +1 -1
  3. package/dist/LaunchMsaView/components/LaunchPanelContent.d.ts +5 -0
  4. package/dist/LaunchMsaView/components/LaunchPanelContent.js +16 -0
  5. package/dist/LaunchMsaView/components/LaunchPanelContent.js.map +1 -0
  6. package/dist/LaunchMsaView/components/ManualMSALoader/ManualMSALoader.js +22 -25
  7. package/dist/LaunchMsaView/components/ManualMSALoader/ManualMSALoader.js.map +1 -1
  8. package/dist/LaunchMsaView/components/NCBIBlastQuery/CachedBlastResults.js +12 -24
  9. package/dist/LaunchMsaView/components/NCBIBlastQuery/CachedBlastResults.js.map +1 -1
  10. package/dist/LaunchMsaView/components/NCBIBlastQuery/MsaAlgorithmSelect.d.ts +7 -0
  11. package/dist/LaunchMsaView/components/NCBIBlastQuery/MsaAlgorithmSelect.js +10 -0
  12. package/dist/LaunchMsaView/components/NCBIBlastQuery/MsaAlgorithmSelect.js.map +1 -0
  13. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastAutomaticPanel.js +23 -32
  14. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastAutomaticPanel.js.map +1 -1
  15. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastManualPanel.js +9 -15
  16. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastManualPanel.js.map +1 -1
  17. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastMethodSelector.d.ts +3 -2
  18. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastMethodSelector.js.map +1 -1
  19. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastPanel.d.ts +25 -0
  20. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastPanel.js.map +1 -1
  21. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastRIDPanel.js +22 -32
  22. package/dist/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastRIDPanel.js.map +1 -1
  23. package/dist/LaunchMsaView/components/NCBIBlastQuery/useCachedBlastResults.js +2 -9
  24. package/dist/LaunchMsaView/components/NCBIBlastQuery/useCachedBlastResults.js.map +1 -1
  25. package/dist/LaunchMsaView/components/PreLoadedMSA/PreLoadedMSADataPanel.js +30 -29
  26. package/dist/LaunchMsaView/components/PreLoadedMSA/PreLoadedMSADataPanel.js.map +1 -1
  27. package/dist/LaunchMsaView/components/PreLoadedMSA/fetchMSAData.js +8 -6
  28. package/dist/LaunchMsaView/components/PreLoadedMSA/fetchMSAData.js.map +1 -1
  29. package/dist/LaunchMsaView/components/SubmitCancelActions.d.ts +8 -0
  30. package/dist/LaunchMsaView/components/SubmitCancelActions.js +12 -0
  31. package/dist/LaunchMsaView/components/SubmitCancelActions.js.map +1 -0
  32. package/dist/LaunchMsaView/components/TranscriptSelector.d.ts +2 -2
  33. package/dist/LaunchMsaView/components/TranscriptSelector.js +2 -2
  34. package/dist/LaunchMsaView/components/TranscriptSelector.js.map +1 -1
  35. package/dist/LaunchMsaView/components/useSWRFeatureSequence.js +3 -13
  36. package/dist/LaunchMsaView/components/useSWRFeatureSequence.js.map +1 -1
  37. package/dist/LaunchMsaView/components/useTranscriptSelection.js +10 -12
  38. package/dist/LaunchMsaView/components/useTranscriptSelection.js.map +1 -1
  39. package/dist/LaunchMsaView/util.d.ts +4 -1
  40. package/dist/LaunchMsaView/util.js +29 -24
  41. package/dist/LaunchMsaView/util.js.map +1 -1
  42. package/dist/jbrowse-plugin-msaview.umd.production.min.js +24 -24
  43. package/dist/jbrowse-plugin-msaview.umd.production.min.js.map +4 -4
  44. package/dist/{LaunchMsaView/components/PreLoadedMSA/consts.d.ts → utils/swrConfig.d.ts} +1 -1
  45. package/dist/{LaunchMsaView/components/PreLoadedMSA/consts.js → utils/swrConfig.js} +2 -2
  46. package/dist/utils/swrConfig.js.map +1 -0
  47. package/dist/version.d.ts +1 -1
  48. package/dist/version.js +1 -1
  49. package/package.json +1 -1
  50. package/src/LaunchMsaView/components/LaunchMsaViewDialog.tsx +9 -6
  51. package/src/LaunchMsaView/components/LaunchPanelContent.tsx +27 -0
  52. package/src/LaunchMsaView/components/ManualMSALoader/ManualMSALoader.tsx +28 -60
  53. package/src/LaunchMsaView/components/NCBIBlastQuery/CachedBlastResults.tsx +21 -33
  54. package/src/LaunchMsaView/components/NCBIBlastQuery/MsaAlgorithmSelect.tsx +37 -0
  55. package/src/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastAutomaticPanel.tsx +29 -75
  56. package/src/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastManualPanel.tsx +10 -31
  57. package/src/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastMethodSelector.tsx +5 -3
  58. package/src/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastPanel.tsx +5 -2
  59. package/src/LaunchMsaView/components/NCBIBlastQuery/NCBIBlastRIDPanel.tsx +28 -78
  60. package/src/LaunchMsaView/components/NCBIBlastQuery/useCachedBlastResults.ts +2 -10
  61. package/src/LaunchMsaView/components/PreLoadedMSA/PreLoadedMSADataPanel.tsx +34 -57
  62. package/src/LaunchMsaView/components/PreLoadedMSA/fetchMSAData.ts +17 -8
  63. package/src/LaunchMsaView/components/SubmitCancelActions.tsx +41 -0
  64. package/src/LaunchMsaView/components/TranscriptSelector.tsx +3 -3
  65. package/src/LaunchMsaView/components/useSWRFeatureSequence.ts +6 -15
  66. package/src/LaunchMsaView/components/useTranscriptSelection.ts +13 -15
  67. package/src/LaunchMsaView/util.ts +35 -25
  68. package/src/MsaViewPanel/util.ts +3 -3
  69. package/src/{LaunchMsaView/components/PreLoadedMSA/consts.ts → utils/swrConfig.ts} +1 -1
  70. package/src/version.ts +1 -1
  71. package/dist/LaunchMsaView/components/PreLoadedMSA/consts.js.map +0 -1
package/src/MsaViewPanel/util.ts CHANGED
@@ -14,9 +14,9 @@ export function checkHovered(hovered: unknown): hovered is {
14
14
  }
15
15
 
16
16
  interface AssemblyManagerLike {
17
- get: (name: string) =>
18
- | { getCanonicalRefName: (r: string) => string | undefined }
19
- | undefined
17
+ get: (
18
+ name: string,
19
+ ) => { getCanonicalRefName: (r: string) => string | undefined } | undefined
20
20
  }
21
21
 
22
22
  export function getCanonicalRefName({
package/src/{LaunchMsaView/components/PreLoadedMSA/consts.ts → utils/swrConfig.ts} RENAMED
@@ -1,4 +1,4 @@
1
- export const swrFlags = {
1
+ export const staticSwrConfig = {
2
2
  revalidateOnFocus: false,
3
3
  revalidateOnReconnect: false,
4
4
  revalidateIfStale: false,
package/src/version.ts CHANGED
@@ -1 +1 @@
1
- export const version = '2.4.2'
1
+ export const version = '2.4.3'
package/dist/LaunchMsaView/components/PreLoadedMSA/consts.js.map DELETED
@@ -1 +0,0 @@
1
- {"version":3,"file":"consts.js","sourceRoot":"","sources":["../../../../src/LaunchMsaView/components/PreLoadedMSA/consts.ts"],"names":[],"mappings":"AAAA,MAAM,CAAC,MAAM,QAAQ,GAAG;IACtB,iBAAiB,EAAE,KAAK;IACxB,qBAAqB,EAAE,KAAK;IAC5B,iBAAiB,EAAE,KAAK;IACxB,iBAAiB,EAAE,KAAK;IACxB,kBAAkB,EAAE,KAAK;IACzB,kBAAkB,EAAE,KAAK;CAC1B,CAAA"}