jbrowse-plugin-msaview 2.2.8 → 2.2.11

package/dist/BgzipFastaMsaAdapter/configSchema.d.ts

@@ -1,7 +1,7 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-export default function configSchemaF(pluginManager: PluginManager): import("@jbrowse/core/esm/configuration/configurationSchema").ConfigurationSchemaType<{
+export default function configSchemaF(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
     msaRegex: {
         type: string;
         defaultValue: string;
     };
-}, import("@jbrowse/core/esm/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration").AnyConfigurationSchemaType, undefined>>;
+}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration").AnyConfigurationSchemaType, undefined>>;

package/dist/MsaViewPanel/model.d.ts

@@ -540,6 +540,12 @@ export default function stateModelFactory(): import("@jbrowse/mobx-state-tree").
     seqPosToGlobalCol(rowName: string, seqPos: number): number;
     seqPosToVisibleCol(rowName: string, seqPos: number): number | undefined;
 } & {
+    readonly hoveredCell: {
+        rowName: string;
+        col: number;
+        base: string | undefined;
+        seqPos: number | undefined;
+    } | undefined;
     readonly msaAreaHeight: number;
     readonly totalTrackAreaHeight: number;
     readonly tidyInterProAnnotationTypes: Map<string, import("react-msaview").Accession>;

package/dist/index.d.ts

@@ -5,9 +5,9 @@ export default class MsaViewPlugin extends Plugin {
     version: string;
     install(pluginManager: PluginManager): void;
     configure(pluginManager: PluginManager): void;
-    rootConfigurationSchema(pluginManager: PluginManager): {
-        msa: import("@jbrowse/core/esm/configuration/configurationSchema").ConfigurationSchemaType<{
-            datasets: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/core/esm/configuration/configurationSchema").ConfigurationSchemaType<{
+    rootConfigurationSchema: (pluginManager: PluginManager) => {
+        msa: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+            datasets: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
                 datasetId: {
                     type: string;
                     defaultValue: string;
@@ -21,7 +21,7 @@ export default class MsaViewPlugin extends Plugin {
                     defaultValue: string;
                 };
                 adapter: import("@jbrowse/mobx-state-tree").IAnyModelType;
-            }, import("@jbrowse/core/esm/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>>>;
-        }, import("@jbrowse/core/esm/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
+            }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>>>;
+        }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
     };
 }

package/dist/index.js

@@ -14,6 +14,27 @@ export default class MsaViewPlugin extends Plugin {
         super(...arguments);
         this.name = 'MsaViewPlugin';
         this.version = version;
+        this.rootConfigurationSchema = (pluginManager) => {
+            return {
+                msa: ConfigurationSchema('MSA', {
+                    datasets: types.maybe(types.array(ConfigurationSchema('MSAEntry', {
+                        datasetId: {
+                            type: 'string',
+                            defaultValue: '',
+                        },
+                        description: {
+                            type: 'string',
+                            defaultValue: '',
+                        },
+                        name: {
+                            type: 'string',
+                            defaultValue: '',
+                        },
+                        adapter: pluginManager.pluggableConfigSchemaType('adapter'),
+                    }))),
+                }),
+            };
+        };
     }
     install(pluginManager) {
         MsaViewF(pluginManager);
@@ -33,27 +54,5 @@ export default class MsaViewPlugin extends Plugin {
             });
         }
     }
-    // @ts-expect-error
-    rootConfigurationSchema(pluginManager) {
-        return {
-            msa: ConfigurationSchema('MSA', {
-                datasets: types.maybe(types.array(ConfigurationSchema('MSAEntry', {
-                    datasetId: {
-                        type: 'string',
-                        defaultValue: '',
-                    },
-                    description: {
-                        type: 'string',
-                        defaultValue: '',
-                    },
-                    name: {
-                        type: 'string',
-                        defaultValue: '',
-                    },
-                    adapter: pluginManager.pluggableConfigSchemaType('adapter'),
-                }))),
-            }),
-        };
-    }
 }
 //# sourceMappingURL=index.js.map

package/dist/index.js.map

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