jbrowse-plugin-graphgenomeviewer 8.0.2 → 8.2.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (111) hide show
  1. package/dist/chunks/{AddTrackWorkflow-RJSOQZYQ.js → AddTrackWorkflow-7CXTSSMR.js} +2 -2
  2. package/dist/chunks/GbzBaseSyntenyAdapter-EJIR3HZM.js +2 -0
  3. package/dist/chunks/GbzBaseSyntenyAdapter-EJIR3HZM.js.map +7 -0
  4. package/dist/chunks/{GraphGenomeView-667ZUNDI.js → GraphGenomeView-2AKRM74B.js} +2 -2
  5. package/dist/chunks/{GraphTrackSettingsDialog-7M3Q635V.js → GraphTrackSettingsDialog-7XRZQW6T.js} +2 -2
  6. package/dist/chunks/{HighlightColorDialog-4F34Q4PY.js → HighlightColorDialog-LCBGD2ZA.js} +2 -2
  7. package/dist/chunks/LinearGraphDisplay-WWQ73BO5.js +2 -0
  8. package/dist/chunks/{MinigraphBubbleAdapter-G25V6MZL.js → MinigraphBubbleAdapter-4OOBJ44C.js} +2 -2
  9. package/dist/chunks/RgfaTabixAdapter-CEGFN2QY.js +2 -0
  10. package/dist/chunks/RgfaTabixAdapter-CEGFN2QY.js.map +7 -0
  11. package/dist/chunks/{WalkFormsAdapter-PBN7BJZW.js → WalkFormsAdapter-LTAKACZD.js} +2 -2
  12. package/dist/chunks/{WalkTabixSyntenyAdapter-27WDE5JF.js → WalkTabixSyntenyAdapter-B6V3YNW7.js} +2 -2
  13. package/dist/chunks/chunk-5FNGR33G.js +2 -0
  14. package/dist/chunks/chunk-5FNGR33G.js.map +7 -0
  15. package/dist/chunks/chunk-6VNDP3UB.js +2 -0
  16. package/dist/chunks/chunk-6VNDP3UB.js.map +7 -0
  17. package/dist/chunks/{chunk-CJAV55QB.js → chunk-BJHWGRMP.js} +1 -1
  18. package/dist/chunks/{chunk-CJAV55QB.js.map → chunk-BJHWGRMP.js.map} +1 -1
  19. package/dist/chunks/{chunk-IAXUZMOX.js → chunk-CNCYMJ5E.js} +2 -2
  20. package/dist/chunks/{chunk-IAXUZMOX.js.map → chunk-CNCYMJ5E.js.map} +2 -2
  21. package/dist/chunks/{chunk-2V75YPTT.js → chunk-CVHKXFVS.js} +2 -2
  22. package/dist/chunks/{chunk-2V75YPTT.js.map → chunk-CVHKXFVS.js.map} +2 -2
  23. package/dist/chunks/chunk-CZI7IP5S.js +2 -0
  24. package/dist/chunks/chunk-CZI7IP5S.js.map +7 -0
  25. package/dist/chunks/chunk-CZXJXNZN.js +3 -0
  26. package/dist/chunks/chunk-CZXJXNZN.js.map +7 -0
  27. package/dist/chunks/chunk-HAAABGE7.js +2 -0
  28. package/dist/chunks/{chunk-JMRW3IGK.js → chunk-IK3MQ4ZJ.js} +2 -2
  29. package/dist/chunks/chunk-IK3MQ4ZJ.js.map +7 -0
  30. package/dist/chunks/{chunk-JOYKGTDE.js → chunk-MCBYBZZJ.js} +2 -2
  31. package/dist/chunks/chunk-NOXHIOIM.js +2 -0
  32. package/dist/chunks/chunk-NOXHIOIM.js.map +7 -0
  33. package/dist/chunks/{chunk-FY7X6253.js → chunk-OGXVDZPS.js} +2 -2
  34. package/dist/chunks/{chunk-FY7X6253.js.map → chunk-OGXVDZPS.js.map} +2 -2
  35. package/dist/chunks/{chunk-3EQNVA3F.js → chunk-OLZZDBQJ.js} +2 -2
  36. package/dist/chunks/{chunk-3EQNVA3F.js.map → chunk-OLZZDBQJ.js.map} +2 -2
  37. package/dist/chunks/{chunk-I6F25EXY.js → chunk-PTOKTIQG.js} +2 -2
  38. package/dist/chunks/{chunk-O5FDMVL3.js → chunk-QWG7NASD.js} +2 -2
  39. package/dist/chunks/chunk-SL4JJJQJ.js +3 -0
  40. package/dist/chunks/chunk-SL4JJJQJ.js.map +7 -0
  41. package/dist/chunks/{chunk-XB5KC2EZ.js → chunk-T2VC3EEL.js} +1 -1
  42. package/dist/chunks/{chunk-XB5KC2EZ.js.map → chunk-T2VC3EEL.js.map} +1 -1
  43. package/dist/chunks/{chunk-2PNGGCQJ.js → chunk-UECOGSWM.js} +2 -2
  44. package/dist/chunks/{chunk-2PNGGCQJ.js.map → chunk-UECOGSWM.js.map} +1 -1
  45. package/dist/chunks/chunk-UHV6XIDG.js +2 -0
  46. package/dist/chunks/chunk-UHV6XIDG.js.map +7 -0
  47. package/dist/chunks/{chunk-5RHNR3TH.js → chunk-VKZALU57.js} +1 -1
  48. package/dist/chunks/{chunk-5RHNR3TH.js.map → chunk-VKZALU57.js.map} +1 -1
  49. package/dist/chunks/chunk-W7IHIVSE.js +2 -0
  50. package/dist/chunks/{chunk-XWCLYB5C.js.map → chunk-W7IHIVSE.js.map} +4 -4
  51. package/dist/chunks/{chunk-NLS74JSZ.js → chunk-WUOXZAGN.js} +2 -2
  52. package/dist/chunks/{chunk-NLS74JSZ.js.map → chunk-WUOXZAGN.js.map} +1 -1
  53. package/dist/chunks/{renderSvg-YNA5VK6A.js → renderSvg-E5Q7MLCH.js} +2 -2
  54. package/dist/jbrowse-plugin-graphgenomeviewer.esm.js +5 -5
  55. package/dist/jbrowse-plugin-graphgenomeviewer.esm.js.map +4 -4
  56. package/package.json +4 -4
  57. package/src/GraphAddTrackWorkflow/buildTrackConfig.ts +12 -2
  58. package/src/GraphAddTrackWorkflow/graphManifest.ts +16 -9
  59. package/src/GraphGenomeView/components/HoverTooltip.tsx +8 -0
  60. package/src/GraphGenomeView/pane/paneBase.ts +14 -9
  61. package/src/RgfaTabixAdapter/RgfaTabixAdapter.ts +94 -41
  62. package/src/RgfaTabixAdapter/configSchema.ts +35 -4
  63. package/src/RgfaTabixAdapter/format2.test.ts +128 -0
  64. package/src/RgfaTabixAdapter/test_data/pggb_ecoli_f1.links.bed.gz +0 -0
  65. package/src/RgfaTabixAdapter/test_data/pggb_ecoli_f1.links.bed.gz.tbi +0 -0
  66. package/src/RgfaTabixAdapter/test_data/pggb_ecoli_f1.segs.bed.gz +0 -0
  67. package/src/RgfaTabixAdapter/test_data/pggb_ecoli_f1.segs.bed.gz.tbi +0 -0
  68. package/src/RgfaTabixAdapter/test_data/pggb_ecoli_f2.graph.bed.gz +0 -0
  69. package/src/RgfaTabixAdapter/test_data/pggb_ecoli_f2.graph.bed.gz.tbi +0 -0
  70. package/src/RgfaTabixAdapter/test_data/walks5_skip.GRCh38.walks.bed.gz +0 -0
  71. package/src/RgfaTabixAdapter/test_data/walks5_skip.GRCh38.walks.bed.gz.tbi +0 -0
  72. package/src/RgfaTabixAdapter/walkFiles.test.ts +21 -0
  73. package/src/RgfaTabixAdapter/walkReader.ts +20 -15
  74. package/src/graphTrackDefaults/index.ts +2 -2
  75. package/src/locationName.ts +2 -0
  76. package/src/version.ts +1 -1
  77. package/dist/chunks/GbzBaseSyntenyAdapter-EGNUOKB2.js +0 -2
  78. package/dist/chunks/GbzBaseSyntenyAdapter-EGNUOKB2.js.map +0 -7
  79. package/dist/chunks/LinearGraphDisplay-BAEMS5WG.js +0 -2
  80. package/dist/chunks/RgfaTabixAdapter-JPTUWO2Z.js +0 -2
  81. package/dist/chunks/RgfaTabixAdapter-JPTUWO2Z.js.map +0 -7
  82. package/dist/chunks/chunk-AH5UWTAV.js +0 -2
  83. package/dist/chunks/chunk-AH5UWTAV.js.map +0 -7
  84. package/dist/chunks/chunk-DG3E6BSX.js +0 -3
  85. package/dist/chunks/chunk-DG3E6BSX.js.map +0 -7
  86. package/dist/chunks/chunk-HLAQQI6G.js +0 -2
  87. package/dist/chunks/chunk-HLAQQI6G.js.map +0 -7
  88. package/dist/chunks/chunk-IKJZPPOA.js +0 -2
  89. package/dist/chunks/chunk-IKJZPPOA.js.map +0 -7
  90. package/dist/chunks/chunk-JMRW3IGK.js.map +0 -7
  91. package/dist/chunks/chunk-Q7QC2EQU.js +0 -2
  92. package/dist/chunks/chunk-RHYBJCA4.js +0 -2
  93. package/dist/chunks/chunk-RHYBJCA4.js.map +0 -7
  94. package/dist/chunks/chunk-X7YIGIYW.js +0 -2
  95. package/dist/chunks/chunk-X7YIGIYW.js.map +0 -7
  96. package/dist/chunks/chunk-XWCLYB5C.js +0 -2
  97. package/dist/chunks/chunk-ZGTG74GE.js +0 -3
  98. package/dist/chunks/chunk-ZGTG74GE.js.map +0 -7
  99. /package/dist/chunks/{AddTrackWorkflow-RJSOQZYQ.js.map → AddTrackWorkflow-7CXTSSMR.js.map} +0 -0
  100. /package/dist/chunks/{GraphGenomeView-667ZUNDI.js.map → GraphGenomeView-2AKRM74B.js.map} +0 -0
  101. /package/dist/chunks/{GraphTrackSettingsDialog-7M3Q635V.js.map → GraphTrackSettingsDialog-7XRZQW6T.js.map} +0 -0
  102. /package/dist/chunks/{HighlightColorDialog-4F34Q4PY.js.map → HighlightColorDialog-LCBGD2ZA.js.map} +0 -0
  103. /package/dist/chunks/{LinearGraphDisplay-BAEMS5WG.js.map → LinearGraphDisplay-WWQ73BO5.js.map} +0 -0
  104. /package/dist/chunks/{MinigraphBubbleAdapter-G25V6MZL.js.map → MinigraphBubbleAdapter-4OOBJ44C.js.map} +0 -0
  105. /package/dist/chunks/{WalkFormsAdapter-PBN7BJZW.js.map → WalkFormsAdapter-LTAKACZD.js.map} +0 -0
  106. /package/dist/chunks/{WalkTabixSyntenyAdapter-27WDE5JF.js.map → WalkTabixSyntenyAdapter-B6V3YNW7.js.map} +0 -0
  107. /package/dist/chunks/{chunk-Q7QC2EQU.js.map → chunk-HAAABGE7.js.map} +0 -0
  108. /package/dist/chunks/{chunk-JOYKGTDE.js.map → chunk-MCBYBZZJ.js.map} +0 -0
  109. /package/dist/chunks/{chunk-I6F25EXY.js.map → chunk-PTOKTIQG.js.map} +0 -0
  110. /package/dist/chunks/{chunk-O5FDMVL3.js.map → chunk-QWG7NASD.js.map} +0 -0
  111. /package/dist/chunks/{renderSvg-YNA5VK6A.js.map → renderSvg-E5Q7MLCH.js.map} +0 -0