jbrowse-plugin-graphgenomeviewer 4.4.0 → 4.4.1

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Files changed (14) hide show
  1. package/dist/chunks/{GraphGenomeView-NHYVE7GZ.js → GraphGenomeView-QGJN2S27.js} +2 -2
  2. package/dist/chunks/{LinearGraphDisplay-742CW5KL.js → LinearGraphDisplay-WPXUCJNR.js} +2 -2
  3. package/dist/chunks/{chunk-QHMGWDDH.js → chunk-EI5D5NAM.js} +2 -2
  4. package/dist/chunks/{chunk-QHMGWDDH.js.map → chunk-EI5D5NAM.js.map} +3 -3
  5. package/dist/chunks/{chunk-5GUQPO7Y.js → chunk-I2IONPCZ.js} +3 -3
  6. package/dist/chunks/{chunk-5GUQPO7Y.js.map → chunk-I2IONPCZ.js.map} +2 -2
  7. package/dist/jbrowse-plugin-graphgenomeviewer.esm.js +5 -5
  8. package/dist/jbrowse-plugin-graphgenomeviewer.esm.js.map +3 -3
  9. package/package.json +2 -2
  10. package/src/GraphGenomeView/components/WalkStrip.tsx +1 -3
  11. package/src/GraphGenomeView/model.ts +3 -1
  12. package/src/version.ts +1 -1
  13. /package/dist/chunks/{GraphGenomeView-NHYVE7GZ.js.map → GraphGenomeView-QGJN2S27.js.map} +0 -0
  14. /package/dist/chunks/{LinearGraphDisplay-742CW5KL.js.map → LinearGraphDisplay-WPXUCJNR.js.map} +0 -0
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "jbrowse-plugin-graphgenomeviewer",
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- "version": "4.4.0",
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+ "version": "4.4.1",
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  "description": "JBrowse 2 graph genome (pangenome) view: rGFA reference-anchored layouts, the Bandage force-directed engine, and haplotype lanes read from a gbz-base database",
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  "license": "GPL-3.0-or-later",
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  "repository": {
@@ -76,7 +76,7 @@
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  "typescript-eslint": "^8.70.1",
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  "typescript7": "npm:typescript@^7.0.2",
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  "vitest": "^5.0.2",
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- "@jbrowse/bandage-core": "4.4.0"
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+ "@jbrowse/bandage-core": "4.4.1"
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  },
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  "peerDependencies": {
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  "react": ">=18.0.0",
package/src/GraphGenomeView/components/WalkStrip.tsx CHANGED
@@ -99,9 +99,7 @@ const WalkStrip = observer(function WalkStrip({
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  const key = walkRowsKey(bars, {
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  ramp: model.referenceRampDomain,
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  rampCss: RAMP_GRADIENT_CSS,
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- genes: model.walkRowGenes?.size
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- ? stripGeneGaps(frame, model.walkRowGeneGaps)
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- : undefined,
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+ genes: stripGeneGaps(frame, model.walkRowGeneGaps, model.walkRowGenes),
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  })
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  return (
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  <div
package/src/GraphGenomeView/model.ts CHANGED
@@ -2344,7 +2344,9 @@ export function GraphPaneMixin() {
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  panSN?.[region.assemblyName] ||
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  region.assemblyName,
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  context: adapter!.context as number | undefined,
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- snarls: adapter!.subgraphSnarls as string | undefined,
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+ snarls: self.cutsWholeWalks
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+ ? 'overlapping'
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+ : (adapter!.subgraphSnarls as string | undefined),
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  },
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  }
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  : undefined
package/src/version.ts CHANGED
@@ -1 +1 @@
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- export const version = '4.4.0'
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+ export const version = '4.4.1'