issue-flow 0.4.2 → 0.4.4

package/dist/{chunk-MEB3B2FI.js → analyze-PDDIU7HD.js}

@@ -5,7 +5,7 @@ import {
 import {
   loadTaskPlan,
   saveTaskPlan
-} from "./chunk-64FU2L2T.js";
+} from "./chunk-X5QCISNM.js";
 import {
   applyPlaceholders,
   loadPrompt
@@ -62,8 +62,7 @@ async function runAnalyze(issue) {
   printSuccess(`Analysis saved to ${analysisPath}`);
   return 0;
 }
-
 export {
   runAnalyze
 };
-//# sourceMappingURL=chunk-MEB3B2FI.js.map
+//# sourceMappingURL=analyze-PDDIU7HD.js.map

package/dist/{chunk-CYWHYPTU.js → chunk-65KDGHLM.js}

@@ -5,7 +5,7 @@ import {
 import {
   loadTaskPlan,
   saveTaskPlan
-} from "./chunk-64FU2L2T.js";
+} from "./chunk-X5QCISNM.js";
 import {
   applyPlaceholders,
   loadPrompt
@@ -75,4 +75,4 @@ async function runPr(issue) {
 export {
   runPr
 };
-//# sourceMappingURL=chunk-CYWHYPTU.js.map
+//# sourceMappingURL=chunk-65KDGHLM.js.map

package/dist/{chunk-4PZXIOXD.js → chunk-HPSU5GGE.js}

@@ -5,7 +5,7 @@ import {
 import {
   loadTaskPlan,
   saveTaskPlan
-} from "./chunk-64FU2L2T.js";
+} from "./chunk-X5QCISNM.js";
 import {
   applyPlaceholders,
   loadPrompt
@@ -82,4 +82,4 @@ async function runReview(issue) {
 export {
   runReview
 };
-//# sourceMappingURL=chunk-4PZXIOXD.js.map
+//# sourceMappingURL=chunk-HPSU5GGE.js.map

package/dist/{chunk-HYP64MZI.js → chunk-LTPXKMPE.js}

@@ -10,7 +10,7 @@ import {
   saveTaskPlan,
   setLastError,
   trimErrorMessage
-} from "./chunk-64FU2L2T.js";
+} from "./chunk-X5QCISNM.js";
 import {
   applyPlaceholders,
   loadPrompt
@@ -21,6 +21,7 @@ import {
   getOutputCallback,
   getStoryUpdateCallback,
   getTermWidth,
+  isVerbose,
   printError,
   printInfo,
   printRetry,
@@ -474,7 +475,9 @@ async function runEngine(config, paths) {
     }
     i++;
     plan = await loadTaskPlan(paths.prdFile);
-    printIterationHeader(i, config.maxIterations, plan.userStories);
+    if (isVerbose()) {
+      printIterationHeader(i, config.maxIterations, plan.userStories);
+    }
     const prompt = applyPlaceholders(promptTemplate, {
       __PRD_FILE__: paths.prdFile,
       __PROGRESS_FILE__: paths.progressFile
@@ -509,7 +512,9 @@ async function runEngine(config, paths) {
           config.backoffBaseSeconds,
           config.backoffMaxSeconds
         );
-        emitLog("");
+        if (isVerbose()) {
+          emitLog("");
+        }
         printRetry(
           `Transient Claude failure on iteration ${i} (attempt ${retryCount}). Retrying in ${delaySeconds}s.`
         );
@@ -559,7 +564,9 @@ async function runEngine(config, paths) {
         "Claude returned a completion signal, but tasks.json still has pending stories. Ignoring completion and continuing."
       );
     }
-    printSuccess(`Iteration ${i} complete. Continuing...`);
+    if (isVerbose()) {
+      printSuccess(`Iteration ${i} complete. Continuing...`);
+    }
     await sleep(2);
   }
   const elapsed = Math.floor((Date.now() - startTime) / 1e3);
@@ -610,4 +617,4 @@ async function runExecute(positionalMaxIter, options) {
 export {
   runExecute
 };
-//# sourceMappingURL=chunk-HYP64MZI.js.map
+//# sourceMappingURL=chunk-LTPXKMPE.js.map

package/dist/chunk-LTPXKMPE.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/config.ts","../src/utils/shell.ts","../src/utils/git.ts","../src/core/engine.ts","../src/ui/progress.ts","../src/ui/summary.ts","../src/utils/retry.ts","../src/core/executor.ts","../src/commands/execute.ts"],"sourcesContent":["import { platform } from 'node:os';\nimport { join } from 'node:path';\nimport type { EngineConfig, ResolvedPaths } from './types.js';\nimport { getProjectRoot } from './utils/git.js';\nimport { run } from './utils/shell.js';\n\n/**\n * Default configuration values — matching the Bash script exactly.\n */\nexport const DEFAULTS = {\n  retryLimit: 10,\n  retryForever: false,\n  backoffBaseSeconds: 30,\n  backoffMaxSeconds: 900,\n} as const;\n\n/**\n * Create a EngineConfig with defaults merged with provided options.\n */\nexport function createConfig(options: Partial<EngineConfig>): EngineConfig {\n  return {\n    issueNumber: options.issueNumber,\n    maxIterations: options.maxIterations,\n    retryLimit: options.retryLimit ?? DEFAULTS.retryLimit,\n    retryForever: options.retryForever ?? DEFAULTS.retryForever,\n    backoffBaseSeconds: options.backoffBaseSeconds ?? DEFAULTS.backoffBaseSeconds,\n    backoffMaxSeconds: options.backoffMaxSeconds ?? DEFAULTS.backoffMaxSeconds,\n  };\n}\n\n/**\n * Resolve file paths based on issue number and project root.\n *\n * With --issue N:\n *   prdFile = {projectRoot}/issues/{N}/tasks.json\n *   progressFile = {projectRoot}/issues/{N}/progress.txt\n *\n * Standalone:\n *   prdFile = {projectRoot}/prd.json\n *   progressFile = {projectRoot}/progress.txt\n */\nexport async function resolvePaths(\n  config: EngineConfig,\n  scriptDir?: string,\n): Promise<ResolvedPaths> {\n  const projectRoot = await getProjectRoot();\n\n  if (config.issueNumber) {\n    const issueDir = join(projectRoot, 'issues', config.issueNumber);\n    return {\n      prdFile: join(issueDir, 'tasks.json'),\n      progressFile: join(issueDir, 'progress.txt'),\n      archiveDir: join(issueDir, 'archive'),\n      lastBranchFile: join(issueDir, '.last-branch'),\n      projectRoot,\n    };\n  }\n\n  // Standalone mode — use scriptDir if available, otherwise projectRoot\n  const base = scriptDir ?? projectRoot;\n  return {\n    prdFile: join(base, 'prd.json'),\n    progressFile: join(base, 'progress.txt'),\n    archiveDir: join(base, 'archive'),\n    lastBranchFile: join(base, '.last-branch'),\n    projectRoot,\n  };\n}\n\n/**\n * Return a platform-appropriate install hint for a given package.\n */\nexport function getInstallHint(pkg: string): string {\n  const os = platform();\n\n  if (os === 'darwin') {\n    return `brew install ${pkg}`;\n  }\n  if (os === 'linux') {\n    return `apt install ${pkg}  (or your distro's package manager)`;\n  }\n  if (os === 'win32') {\n    return `winget install ${pkg}  (or choco install ${pkg})`;\n  }\n\n  return `install ${pkg} using your system package manager`;\n}\n\n/**\n * Validate that required external dependencies are available.\n * Returns an array of error messages (empty if all deps are found).\n */\nexport async function validateDependencies(): Promise<string[]> {\n  const errors: string[] = [];\n\n  // Check git\n  const gitResult = await run('git', ['--version']);\n  if (gitResult.exitCode !== 0) {\n    errors.push(`  - git  (install with: ${getInstallHint('git')})`);\n  }\n\n  // Check claude\n  const claudeResult = await run('claude', ['--version']);\n  if (claudeResult.exitCode !== 0) {\n    errors.push('  - claude  (install with: npm install -g @anthropic-ai/claude-code)');\n  }\n\n  // Note: jq is NOT required — the TypeScript CLI handles JSON natively\n\n  return errors;\n}\n","import { type Options as ExecaOptions, execa } from 'execa';\n\nexport interface ExecResult {\n  stdout: string;\n  stderr: string;\n  exitCode: number;\n}\n\n/**\n * Execute a command with arguments and capture its output.\n * Uses execa which calls execFile internally (no shell injection risk).\n * Does not throw on non-zero exit codes.\n */\nexport async function run(\n  command: string,\n  args: string[] = [],\n  options?: ExecaOptions,\n): Promise<ExecResult> {\n  const result = await execa(command, args, {\n    reject: false,\n    ...options,\n  });\n\n  return {\n    stdout: result.stdout?.toString() ?? '',\n    stderr: result.stderr?.toString() ?? '',\n    exitCode: result.exitCode ?? 1,\n  };\n}\n","import { run } from './shell.js';\n\n/**\n * Get the root directory of the current git repository.\n * Throws if not inside a git repository.\n */\nexport async function getProjectRoot(): Promise<string> {\n  const result = await run('git', ['rev-parse', '--show-toplevel']);\n\n  if (result.exitCode !== 0) {\n    throw new Error(\n      'Not inside a git repository. Please run issue-flow from within a git project.',\n    );\n  }\n\n  return result.stdout.trim();\n}\n\n/**\n * Get the current git branch name.\n * Returns an empty string if in detached HEAD state.\n */\nexport async function getCurrentBranch(): Promise<string> {\n  const result = await run('git', ['branch', '--show-current']);\n\n  if (result.exitCode !== 0) {\n    throw new Error(\n      'Failed to detect git branch. Ensure git is installed and you are inside a repository.',\n    );\n  }\n\n  return result.stdout.trim();\n}\n","import { existsSync } from 'node:fs';\nimport { cp, mkdir, readFile, writeFile } from 'node:fs/promises';\nimport { join } from 'node:path';\nimport type { EngineConfig, ResolvedPaths, TaskPlan } from '../types.js';\nimport { printError, printInfo, printRetry, printSuccess, printWarning } from '../ui/logger.js';\nimport { printIterationHeader } from '../ui/progress.js';\nimport { printStartupHeader, printSummaryBox } from '../ui/summary.js';\nimport { isTransientFailure, retryDelaySeconds } from '../utils/retry.js';\nimport { executeClaude } from './executor.js';\nimport { applyPlaceholders, loadPrompt } from './prompt-resolver.js';\nimport {\n  allStoriesPass,\n  clearLastError,\n  initializeState,\n  isoNow,\n  loadTaskPlan,\n  markIssueCompleted,\n  markIssueInProgress,\n  saveTaskPlan,\n  setLastError,\n  trimErrorMessage,\n} from './state-manager.js';\nimport { getOutputCallback, getStoryUpdateCallback, isVerbose } from './verbose.js';\n\n/**\n * Sleep for a given number of seconds.\n */\nfunction sleep(seconds: number): Promise<void> {\n  return new Promise((resolve) => setTimeout(resolve, seconds * 1000));\n}\n\n/**\n * Emit a message through the output callback if available, otherwise console.log.\n * Used for bare console.log calls in engine functions so they route through listr2.\n */\nfunction emitLog(message: string): void {\n  const cb = getOutputCallback();\n  if (cb) {\n    // Skip empty lines in listr2 context — they don't render meaningfully\n    if (message) {\n      cb(message);\n    }\n  } else {\n    console.log(message);\n  }\n}\n\n/**\n * Initialize the progress file if it doesn't exist.\n */\nasync function ensureProgressFile(progressFile: string): Promise<void> {\n  if (!existsSync(progressFile)) {\n    const content = `# Issue Flow Progress Log\\nStarted: ${new Date().toString()}\\n---\\n`;\n    await writeFile(progressFile, content, 'utf-8');\n  }\n}\n\n/**\n * Archive previous run artifacts if the branch has changed.\n */\nasync function archiveIfBranchChanged(plan: TaskPlan, paths: ResolvedPaths): Promise<void> {\n  const { lastBranchFile, archiveDir, prdFile, progressFile } = paths;\n\n  if (!existsSync(lastBranchFile)) {\n    return;\n  }\n\n  const currentBranch = plan.branchName ?? '';\n  let lastBranch = '';\n\n  try {\n    lastBranch = (await readFile(lastBranchFile, 'utf-8')).trim();\n  } catch {\n    return;\n  }\n\n  if (currentBranch && lastBranch && currentBranch !== lastBranch) {\n    const dateStr = new Date().toISOString().split('T')[0];\n    const folderName = lastBranch.replace(/^issue\\//, '').replace(/[<>:\"|?*\\\\]/g, '_');\n    const archiveFolder = join(archiveDir, `${dateStr}-${folderName}`);\n\n    printInfo(`Archiving previous run: ${lastBranch}`);\n    await mkdir(archiveFolder, { recursive: true });\n\n    if (existsSync(prdFile)) {\n      await cp(prdFile, join(archiveFolder, 'tasks.json'));\n    }\n    if (existsSync(progressFile)) {\n      await cp(progressFile, join(archiveFolder, 'progress.txt'));\n    }\n\n    printInfo(`   Archived to: ${archiveFolder}`);\n\n    // Reset progress file for new run\n    await writeFile(\n      progressFile,\n      `# Issue Flow Progress Log\\nStarted: ${new Date().toString()}\\n---\\n`,\n      'utf-8',\n    );\n  }\n}\n\n/**\n * Write the current branch to the last-branch tracking file.\n */\nasync function trackBranch(plan: TaskPlan, lastBranchFile: string): Promise<void> {\n  const branch = plan.branchName ?? '';\n  if (branch) {\n    await writeFile(lastBranchFile, `${branch}\\n`, 'utf-8');\n  }\n}\n\n/**\n * Run the issue-flow engine loop.\n *\n * This replicates the full execution flow:\n * 1. Load and initialize task plan state\n * 2. Check for early exit (already complete)\n * 3. Archive previous run if branch changed\n * 4. Resolve prompt\n * 5. Main loop: iterate, execute Claude, handle results\n * 6. Print summary\n */\nexport async function runEngine(config: EngineConfig, paths: ResolvedPaths): Promise<number> {\n  // Load task plan\n  if (!existsSync(paths.prdFile)) {\n    printError(`PRD file not found at ${paths.prdFile}`);\n    if (config.issueNumber) {\n      emitLog(`Have you run the resolve-issue skill for issue #${config.issueNumber} first?`);\n    }\n    return 1;\n  }\n\n  let plan = await loadTaskPlan(paths.prdFile);\n  plan = initializeState(plan);\n  await saveTaskPlan(paths.prdFile, plan);\n\n  // Check if already completed\n  if (plan.issueStatus === 'completed' && allStoriesPass(plan)) {\n    emitLog(`Issue already marked complete in ${paths.prdFile}`);\n    return 0;\n  }\n\n  // Warn if marked complete but stories still pending\n  if (plan.issueStatus === 'completed' && !allStoriesPass(plan)) {\n    printWarning(\n      'Issue marked completed but some stories are still pending. Resetting to in_progress.',\n    );\n    plan = markIssueInProgress(plan);\n    plan = setLastError(\n      plan,\n      'invalid_completion_state',\n      'tasks.json claimed the issue was completed before every story had passes=true.',\n    );\n    await saveTaskPlan(paths.prdFile, plan);\n  }\n\n  // Check if all stories already pass\n  if (allStoriesPass(plan)) {\n    emitLog('All user stories already pass. Marking issue as completed.');\n    plan = markIssueCompleted(plan);\n    await saveTaskPlan(paths.prdFile, plan);\n    return 0;\n  }\n\n  // Archive previous run if branch changed\n  await archiveIfBranchChanged(plan, paths);\n\n  // Track current branch\n  await trackBranch(plan, paths.lastBranchFile);\n\n  // Initialize progress file\n  await ensureProgressFile(paths.progressFile);\n\n  // Load prompt template\n  const promptTemplate = await loadPrompt('execute');\n\n  // Print startup header\n  printStartupHeader(config, plan);\n\n  const startTime = Date.now();\n  let i = 0;\n  let retryCount = 0;\n  let totalRetryCount = 0;\n\n  // Main loop\n  while (true) {\n    // Check iteration limit\n    if (config.maxIterations !== undefined && i >= config.maxIterations) {\n      break;\n    }\n\n    i++;\n\n    // Re-read plan to get latest state\n    plan = await loadTaskPlan(paths.prdFile);\n\n    if (isVerbose()) {\n      printIterationHeader(i, config.maxIterations, plan.userStories);\n    }\n\n    // Apply placeholders to prompt\n    const prompt = applyPlaceholders(promptTemplate, {\n      __PRD_FILE__: paths.prdFile,\n      __PROGRESS_FILE__: paths.progressFile,\n    });\n\n    const iterationStartedAt = isoNow();\n    plan = markIssueInProgress(plan, iterationStartedAt);\n    await saveTaskPlan(paths.prdFile, plan);\n\n    // Execute Claude\n    const result = await executeClaude(prompt);\n\n    if (result.exitCode !== 0) {\n      const errorMessage = trimErrorMessage(result.output);\n\n      if (isTransientFailure(result.exitCode, result.output)) {\n        retryCount++;\n        totalRetryCount++;\n        plan = await loadTaskPlan(paths.prdFile);\n        plan = setLastError(plan, 'transient_claude_failure', errorMessage);\n        await saveTaskPlan(paths.prdFile, plan);\n\n        if (!config.retryForever && retryCount > config.retryLimit) {\n          const elapsed = Math.floor((Date.now() - startTime) / 1000);\n          plan = await loadTaskPlan(paths.prdFile);\n          printSummaryBox(\n            'failed',\n            i,\n            totalRetryCount,\n            elapsed,\n            plan,\n            `Exceeded retry limit (${config.retryLimit}) on transient errors`,\n          );\n          return result.exitCode;\n        }\n\n        const delaySeconds = retryDelaySeconds(\n          retryCount,\n          config.backoffBaseSeconds,\n          config.backoffMaxSeconds,\n        );\n\n        if (isVerbose()) {\n          emitLog('');\n        }\n        printRetry(\n          `Transient Claude failure on iteration ${i} (attempt ${retryCount}). Retrying in ${delaySeconds}s.`,\n        );\n\n        // Stay within current iteration budget\n        i--;\n        await sleep(delaySeconds);\n        continue;\n      }\n\n      // Fatal failure\n      plan = await loadTaskPlan(paths.prdFile);\n      plan = setLastError(plan, 'fatal_claude_failure', errorMessage);\n      await saveTaskPlan(paths.prdFile, plan);\n\n      const elapsed = Math.floor((Date.now() - startTime) / 1000);\n      printSummaryBox(\n        'failed',\n        i,\n        totalRetryCount,\n        elapsed,\n        plan,\n        `Claude CLI failed with exit code ${result.exitCode}`,\n      );\n      return result.exitCode;\n    }\n\n    // Success — reset retry counter\n    retryCount = 0;\n    plan = await loadTaskPlan(paths.prdFile);\n    plan = clearLastError(plan, iterationStartedAt);\n    await saveTaskPlan(paths.prdFile, plan);\n\n    // Notify story progress listeners (e.g., listr2 subtasks)\n    const storyUpdateCb = getStoryUpdateCallback();\n    if (storyUpdateCb) {\n      storyUpdateCb(plan.userStories);\n    }\n\n    // Check for completion signal\n    if (result.output.includes('<promise>COMPLETE</promise>')) {\n      plan = await loadTaskPlan(paths.prdFile);\n      if (allStoriesPass(plan)) {\n        plan = markIssueCompleted(plan);\n        await saveTaskPlan(paths.prdFile, plan);\n\n        const elapsed = Math.floor((Date.now() - startTime) / 1000);\n        printSummaryBox('success', i, totalRetryCount, elapsed, plan);\n        return 0;\n      }\n\n      plan = setLastError(\n        plan,\n        'invalid_completion_signal',\n        'Claude returned <promise>COMPLETE</promise> before every story had passes=true.',\n      );\n      await saveTaskPlan(paths.prdFile, plan);\n\n      emitLog('');\n      printWarning(\n        'Claude returned a completion signal, but tasks.json still has pending stories. Ignoring completion and continuing.',\n      );\n    }\n\n    if (isVerbose()) {\n      printSuccess(`Iteration ${i} complete. Continuing...`);\n    }\n    await sleep(2);\n  }\n\n  // Reached max iterations\n  const elapsed = Math.floor((Date.now() - startTime) / 1000);\n  plan = await loadTaskPlan(paths.prdFile);\n  printSummaryBox(\n    'incomplete',\n    config.maxIterations ?? i,\n    totalRetryCount,\n    elapsed,\n    plan,\n    'Reached max iterations without completing all tasks.',\n  );\n  return 1;\n}\n","import chalk from 'chalk';\nimport { getOutputCallback } from '../core/verbose.js';\nimport type { UserStory } from '../types.js';\nimport { getIcons, useColor, useUnicode } from './logger.js';\n\n/**\n * Print a visual progress bar showing passed/total stories.\n */\nexport function printProgressBar(passed: number, total: number): string {\n  const barWidth = 20;\n  let pct = 0;\n  let filled = 0;\n\n  if (total > 0) {\n    pct = Math.floor((passed * 100) / total);\n    filled = Math.floor((passed * barWidth) / total);\n  }\n\n  const empty = barWidth - filled;\n  const fillChar = useUnicode() ? '\\u2588' : '#';\n  const emptyChar = useUnicode() ? '\\u2591' : '-';\n\n  const bar = fillChar.repeat(filled) + emptyChar.repeat(empty);\n  const text = `${passed}/${total} (${pct}%)`;\n\n  if (useColor()) {\n    return `${chalk.green(bar)} ${text}`;\n  }\n  return `${bar} ${text}`;\n}\n\n/**\n * Print the iteration header showing story statuses and progress bar.\n *\n * When a global output callback is set (e.g., inside a listr2 task),\n * output is routed through it instead of console.log.\n */\nexport function printIterationHeader(\n  iteration: number,\n  maxIter: number | undefined,\n  stories: UserStory[],\n): void {\n  const icons = getIcons();\n  const colored = useColor();\n  const cb = getOutputCallback();\n\n  const iterLabel = maxIter ? `Iteration ${iteration} of ${maxIter}` : `Iteration ${iteration}`;\n\n  const total = stories.length;\n  const passed = stories.filter((s) => s.passes).length;\n\n  const lines: string[] = [];\n\n  if (colored) {\n    lines.push(chalk.blue(`\\u2501\\u2501\\u2501 ${icons.start} ${iterLabel} \\u2501\\u2501\\u2501`));\n  } else {\n    lines.push(`--- ${icons.start} ${iterLabel} ---`);\n  }\n\n  // Display each story status\n  let foundFirstPending = false;\n  for (const story of stories) {\n    let icon: string;\n    let colorFn: (s: string) => string;\n\n    if (story.passes) {\n      icon = icons.success;\n      colorFn = colored ? chalk.green : (s: string) => s;\n    } else if (!foundFirstPending) {\n      // First non-passing story = current in-progress\n      icon = icons.pending;\n      colorFn = colored ? chalk.yellow : (s: string) => s;\n      foundFirstPending = true;\n    } else {\n      // Not yet reached\n      icon = icons.notReached;\n      colorFn = colored ? chalk.gray : (s: string) => s;\n    }\n\n    lines.push(colorFn(`  ${icon} ${story.id}: ${story.title}`));\n  }\n\n  lines.push(`  ${printProgressBar(passed, total)}`);\n\n  if (cb) {\n    // Send as single output to listr2 task context\n    cb(lines.join('\\n'));\n  } else {\n    console.log('');\n    for (const line of lines) {\n      console.log(line);\n    }\n    console.log('');\n  }\n}\n","import chalk from 'chalk';\nimport type { EngineConfig, TaskPlan } from '../types.js';\nimport { formatDuration, getIcons, getTermWidth, useColor, useUnicode } from './logger.js';\n\n/**\n * Truncate or pad a string to fit within a given width.\n */\nfunction fitLine(text: string, width: number): string {\n  if (text.length > width) {\n    return text.substring(0, width);\n  }\n  return text.padEnd(width);\n}\n\n/**\n * Print a box with border characters around content lines.\n * Lines equal to \"---\" render as separator rows.\n */\nexport function printBox(lines: string[]): void {\n  const colored = useColor();\n  const unicode = useUnicode();\n  const termWidth = getTermWidth();\n\n  // Find max content width\n  let maxContentWidth = 0;\n  for (const line of lines) {\n    if (line !== '---' && line.length > maxContentWidth) {\n      maxContentWidth = line.length;\n    }\n  }\n\n  // Cap to terminal width (border + padding = 4 chars)\n  const available = termWidth - 4;\n  if (maxContentWidth > available) {\n    maxContentWidth = available;\n  }\n  if (maxContentWidth < 20) {\n    maxContentWidth = 20;\n  }\n\n  // Box drawing characters\n  const tl = unicode ? '\\u256D' : '+';\n  const tr = unicode ? '\\u256E' : '+';\n  const bl = unicode ? '\\u2570' : '+';\n  const br = unicode ? '\\u256F' : '+';\n  const h = unicode ? '\\u2500' : '-';\n  const v = unicode ? '\\u2502' : '|';\n  const sepL = unicode ? '\\u251C' : '+';\n  const sepR = unicode ? '\\u2524' : '+';\n\n  const hrule = h.repeat(maxContentWidth + 2);\n\n  const blue = colored ? chalk.blue : (s: string) => s;\n  const _reset = (s: string) => s;\n\n  // Top border\n  console.log(blue(`${tl}${hrule}${tr}`));\n\n  // Content lines\n  for (const line of lines) {\n    if (line === '---') {\n      console.log(blue(`${sepL}${hrule}${sepR}`));\n    } else {\n      const fitted = fitLine(line, maxContentWidth);\n      console.log(`${blue(v)} ${fitted} ${blue(v)}`);\n    }\n  }\n\n  // Bottom border\n  console.log(blue(`${bl}${hrule}${br}`));\n}\n\n/**\n * Print the startup header box showing engine configuration.\n */\nexport function printStartupHeader(config: EngineConfig, plan: TaskPlan): void {\n  const icons = getIcons();\n\n  const storiesTotal = plan.userStories.length;\n  const storiesPassing = plan.userStories.filter((s) => s.passes).length;\n  const branchName = plan.branchName ?? 'N/A';\n\n  const issueLabel = config.issueNumber ? `Issue #${config.issueNumber}` : 'Standalone mode';\n\n  const maxIterLabel =\n    config.maxIterations !== undefined ? String(config.maxIterations) : 'unlimited';\n\n  const retryLabel = config.retryForever\n    ? 'unlimited retries'\n    : `${config.retryLimit} consecutive retries`;\n\n  printBox([\n    `${icons.start} Issue Flow`,\n    '---',\n    `Issue:       ${issueLabel}`,\n    `Branch:      ${branchName}`,\n    `Stories:     ${storiesPassing}/${storiesTotal} passing`,\n    `Iterations:  ${maxIterLabel}`,\n    `Retries:     ${retryLabel}`,\n  ]);\n}\n\n// Re-export formatDuration from logger to maintain backwards compatibility\nexport { formatDuration } from './logger.js';\n\n/**\n * Print the final summary box.\n */\nexport function printSummaryBox(\n  status: 'success' | 'incomplete' | 'failed',\n  iterations: number,\n  totalRetries: number,\n  elapsedSeconds: number,\n  plan: TaskPlan,\n  extraInfo?: string,\n): void {\n  const icons = getIcons();\n\n  const storiesTotal = plan.userStories.length;\n  const storiesPassing = plan.userStories.filter((s) => s.passes).length;\n  const duration = formatDuration(elapsedSeconds);\n\n  let statusIcon: string;\n  let statusLabel: string;\n\n  switch (status) {\n    case 'success':\n      statusIcon = icons.success;\n      statusLabel = 'Completed';\n      break;\n    case 'incomplete':\n      statusIcon = icons.warn;\n      statusLabel = 'Incomplete';\n      break;\n    case 'failed':\n      statusIcon = icons.fail;\n      statusLabel = 'Failed';\n      break;\n  }\n\n  const boxLines = [\n    `${icons.end} Issue Flow Summary`,\n    '---',\n    `Status:      ${statusIcon} ${statusLabel}`,\n    `Stories:     ${storiesPassing}/${storiesTotal} passing`,\n    `Iterations:  ${iterations}`,\n    `Duration:    ${duration}`,\n    `Retries:     ${totalRetries}`,\n  ];\n\n  if (extraInfo) {\n    boxLines.push('---');\n    boxLines.push(extraInfo);\n  }\n\n  console.log('');\n  printBox(boxLines);\n}\n","/**\n * Transient failure patterns — matching the Bash script's detection heuristics.\n * These are checked case-insensitively against the combined output.\n */\nconst TRANSIENT_PATTERNS = [\n  'timed out',\n  'timeout',\n  'connection reset',\n  'connection refused',\n  'connection aborted',\n  'network error',\n  'network unavailable',\n  'temporary failure',\n  'temporarily unavailable',\n  'service unavailable',\n  'overloaded',\n  'rate limit',\n  'too many requests',\n  'bad gateway',\n  'gateway timeout',\n  'internal server error',\n  'http 429',\n  'http 500',\n  'http 502',\n  'http 503',\n  'http 504',\n  'econnreset',\n  'econnrefused',\n  'enotfound',\n  'etimedout',\n  'socket hang up',\n];\n\n/**\n * Determine if a Claude CLI failure is transient (retryable).\n *\n * A failure is considered transient if:\n * - Exit code is 75 (EX_TEMPFAIL)\n * - Output contains known transient error patterns\n */\nexport function isTransientFailure(exitCode: number, output: string): boolean {\n  // Exit code 75 = EX_TEMPFAIL\n  if (exitCode === 75) {\n    return true;\n  }\n\n  const lowered = output.toLowerCase();\n  return TRANSIENT_PATTERNS.some((pattern) => lowered.includes(pattern));\n}\n\n/**\n * Calculate retry delay using exponential backoff.\n *\n * delay = baseSeconds * 2^(attempt-1), capped at maxSeconds\n *\n * @param attempt - The retry attempt number (1-based)\n * @param baseSeconds - Base delay in seconds (default: 30)\n * @param maxSeconds - Maximum delay in seconds (default: 900)\n */\nexport function retryDelaySeconds(\n  attempt: number,\n  baseSeconds: number = 30,\n  maxSeconds: number = 900,\n): number {\n  const delay = baseSeconds * 2 ** (attempt - 1);\n  return Math.min(delay, maxSeconds);\n}\n","import { execa } from 'execa';\nimport type { ClaudeResult } from '../types.js';\nimport { getOutputCallback } from './verbose.js';\n\n/**\n * Execute Claude CLI with a prompt piped to stdin.\n *\n * Runs: echo $PROMPT | claude --dangerously-skip-permissions --print\n *\n * Captures combined stdout+stderr output. Does not throw on non-zero exit codes.\n * Output is returned via ClaudeResult and routed through the output callback infrastructure.\n */\nexport async function executeClaude(prompt: string): Promise<ClaudeResult> {\n  const result = await execa('claude', ['--dangerously-skip-permissions', '--print'], {\n    input: prompt,\n    reject: false,\n    timeout: 0, // No timeout — let the engine handle iteration limits\n    stripFinalNewline: false,\n  });\n\n  // Combine stdout and stderr to match Bash's 2>&1 behavior\n  const stdout = result.stdout?.toString() ?? '';\n  const stderr = result.stderr?.toString() ?? '';\n  const output = stdout + (stderr ? `\\n${stderr}` : '');\n\n  // Forward output through the global callback (listr2 renderer) when active\n  const onOutput = getOutputCallback();\n  if (onOutput) {\n    const trimmed = output.trim();\n    if (trimmed) {\n      onOutput(trimmed);\n    }\n  }\n\n  return {\n    exitCode: result.exitCode ?? 1,\n    output,\n  };\n}\n","import { createConfig, resolvePaths, validateDependencies } from '../config.js';\nimport { runEngine } from '../core/engine.js';\nimport { allStoriesPass, loadTaskPlan, saveTaskPlan } from '../core/state-manager.js';\nimport { printError } from '../ui/logger.js';\n\nexport interface ExecuteOptions {\n  issue?: string;\n  maxIterations?: number;\n  retryLimit?: number;\n  retryForever?: boolean;\n}\n\nexport async function runExecute(\n  positionalMaxIter: number | undefined,\n  options: ExecuteOptions,\n): Promise<number> {\n  const errors = await validateDependencies();\n  if (errors.length > 0) {\n    printError('The following required tools are not installed:');\n    for (const err of errors) {\n      console.log(err);\n    }\n    return 1;\n  }\n\n  const maxIterations = options.maxIterations ?? positionalMaxIter;\n\n  const config = createConfig({\n    issueNumber: options.issue,\n    maxIterations,\n    retryLimit: options.retryLimit,\n    retryForever: options.retryForever,\n  });\n\n  const paths = await resolvePaths(config);\n  const exitCode = await runEngine(config, paths);\n\n  // Update pipeline state if all stories pass\n  if (exitCode === 0 && config.issueNumber) {\n    try {\n      const plan = await loadTaskPlan(paths.prdFile);\n      if (allStoriesPass(plan)) {\n        plan.pipeline.executionCompleted = true;\n        await saveTaskPlan(paths.prdFile, plan);\n      }\n    } catch {\n      // Non-critical — engine already handled state\n    }\n  }\n\n  return 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package/dist/{chunk-2JZCWJEQ.js → chunk-SKTTLX7R.js}

@@ -5,7 +5,7 @@ import {
 import {
   loadTaskPlan,
   saveTaskPlan
-} from "./chunk-64FU2L2T.js";
+} from "./chunk-X5QCISNM.js";
 import {
   applyPlaceholders,
   loadPrompt
@@ -24,21 +24,9 @@ async function runPrd(issue) {
   const issueDir = join("issues", issueNumber);
   const prdPath = join(issueDir, "prd.md");
   await mkdir(issueDir, { recursive: true });
-  let analysisContext = "";
-  const analysisPath = join(issueDir, "analysis.md");
-  try {
-    const content = await readFile(analysisPath, "utf-8");
-    analysisContext = `
-
-Here is the existing analysis for this issue:
-
-${content}`;
-  } catch {
-  }
   const template = await loadPrompt("prd");
   const prompt = applyPlaceholders(template, {
     __ISSUE_NUMBER__: issueNumber,
-    __ANALYSIS_CONTEXT__: analysisContext,
     __PRD_PATH__: prdPath
   });
   const result = await runHeadless({
@@ -77,4 +65,4 @@ ${content}`;
 export {
   runPrd
 };
-//# sourceMappingURL=chunk-2JZCWJEQ.js.map
+//# sourceMappingURL=chunk-SKTTLX7R.js.map

package/dist/chunk-SKTTLX7R.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/commands/prd.ts"],"sourcesContent":["import { mkdir, readFile } from 'node:fs/promises';\nimport { join } from 'node:path';\nimport { runHeadless } from '../core/headless.js';\nimport { applyPlaceholders, loadPrompt } from '../core/prompt-resolver.js';\nimport { loadTaskPlan, saveTaskPlan } from '../core/state-manager.js';\nimport { getGlobalTimeout } from '../core/verbose.js';\nimport { printError, printSuccess } from '../ui/logger.js';\n\nexport async function runPrd(issue: string): Promise<number> {\n  const issueNumber = issue.replace(/^#/, '');\n  const issueDir = join('issues', issueNumber);\n  const prdPath = join(issueDir, 'prd.md');\n\n  await mkdir(issueDir, { recursive: true });\n\n  const template = await loadPrompt('prd');\n  const prompt = applyPlaceholders(template, {\n    __ISSUE_NUMBER__: issueNumber,\n    __PRD_PATH__: prdPath,\n  });\n\n  const result = await runHeadless({\n    prompt,\n    maxTurns: 25,\n    timeout: getGlobalTimeout() ?? 300_000,\n    outputFormat: 'text',\n    allowedTools: ['Bash', 'Read', 'Glob', 'Grep', 'Write'],\n    statusMessage: `Generating PRD for issue #${issueNumber}...`,\n  });\n\n  if (!result.success) {\n    printError(`PRD generation failed: ${result.error}`);\n    return 1;\n  }\n\n  // Verify the file was created\n  try {\n    const content = await readFile(prdPath, 'utf-8');\n    if (content.length < 10) {\n      printError('PRD file was created but appears empty');\n      return 1;\n    }\n  } catch {\n    printError(`PRD file was not created at ${prdPath}`);\n    return 1;\n  }\n\n  // Update pipeline state\n  const tasksPath = join(issueDir, 'tasks.json');\n  try {\n    const plan = await loadTaskPlan(tasksPath);\n    plan.pipeline.prdCompleted = true;\n    await saveTaskPlan(tasksPath, plan);\n  } catch {\n    // tasks.json may not exist yet\n  }\n\n  printSuccess(`PRD saved to ${prdPath}`);\n  return 0;\n}\n"],"mappings":";;;;;;;;;;;;;;;;;;;AAAA,SAAS,OAAO,gBAAgB;AAChC,SAAS,YAAY;AAOrB,eAAsB,OAAO,OAAgC;AAC3D,QAAM,cAAc,MAAM,QAAQ,MAAM,EAAE;AAC1C,QAAM,WAAW,KAAK,UAAU,WAAW;AAC3C,QAAM,UAAU,KAAK,UAAU,QAAQ;AAEvC,QAAM,MAAM,UAAU,EAAE,WAAW,KAAK,CAAC;AAEzC,QAAM,WAAW,MAAM,WAAW,KAAK;AACvC,QAAM,SAAS,kBAAkB,UAAU;AAAA,IACzC,kBAAkB;AAAA,IAClB,cAAc;AAAA,EAChB,CAAC;AAED,QAAM,SAAS,MAAM,YAAY;AAAA,IAC/B;AAAA,IACA,UAAU;AAAA,IACV,SAAS,iBAAiB,KAAK;AAAA,IAC/B,cAAc;AAAA,IACd,cAAc,CAAC,QAAQ,QAAQ,QAAQ,QAAQ,OAAO;AAAA,IACtD,eAAe,6BAA6B,WAAW;AAAA,EACzD,CAAC;AAED,MAAI,CAAC,OAAO,SAAS;AACnB,eAAW,0BAA0B,OAAO,KAAK,EAAE;AACnD,WAAO;AAAA,EACT;AAGA,MAAI;AACF,UAAM,UAAU,MAAM,SAAS,SAAS,OAAO;AAC/C,QAAI,QAAQ,SAAS,IAAI;AACvB,iBAAW,wCAAwC;AACnD,aAAO;AAAA,IACT;AAAA,EACF,QAAQ;AACN,eAAW,+BAA+B,OAAO,EAAE;AACnD,WAAO;AAAA,EACT;AAGA,QAAM,YAAY,KAAK,UAAU,YAAY;AAC7C,MAAI;AACF,UAAM,OAAO,MAAM,aAAa,SAAS;AACzC,SAAK,SAAS,eAAe;AAC7B,UAAM,aAAa,WAAW,IAAI;AAAA,EACpC,QAAQ;AAAA,EAER;AAEA,eAAa,gBAAgB,OAAO,EAAE;AACtC,SAAO;AACT;","names":[]}

package/dist/{chunk-64FU2L2T.js → chunk-X5QCISNM.js}

@@ -12,7 +12,7 @@ var userStorySchema = z.object({
   notes: z.string()
 });
 var pipelineStateSchema = z.object({
-  analyzeCompleted: z.boolean(),
+  analyzeCompleted: z.boolean().optional(),
   prdCompleted: z.boolean(),
   jsonCompleted: z.boolean(),
   executionCompleted: z.boolean(),
@@ -29,6 +29,7 @@ var taskPlanSchema = z.object({
   issueNumber: z.number().int().positive(),
   issueUrl: z.string(),
   branchName: z.string(),
+  noBranch: z.boolean().optional().default(false),
   description: z.string(),
   issueStatus: z.enum(["pending", "in_progress", "completed"]),
   completedAt: z.string().nullable(),
@@ -89,7 +90,6 @@ async function saveTaskPlan(path, plan) {
 }
 function initializeState(plan) {
   const defaultPipeline = {
-    analyzeCompleted: false,
     prdCompleted: false,
     jsonCompleted: false,
     executionCompleted: false,
@@ -177,4 +177,4 @@ export {
   clearLastError,
   trimErrorMessage
 };
-//# sourceMappingURL=chunk-64FU2L2T.js.map
+//# sourceMappingURL=chunk-X5QCISNM.js.map

package/dist/chunk-X5QCISNM.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/schemas.ts","../src/core/state-manager.ts"],"sourcesContent":["import { z } from 'zod';\n\n/**\n * Zod schemas for validating tasks.json structure and headless invocation outputs.\n */\n\nexport const userStorySchema = z.object({\n  id: z.string(),\n  title: z.string(),\n  description: z.string(),\n  acceptanceCriteria: z.array(z.string()),\n  priority: z.number().int().positive(),\n  passes: z.boolean(),\n  notes: z.string(),\n});\n\nexport const pipelineStateSchema = z.object({\n  analyzeCompleted: z.boolean().optional(),\n  prdCompleted: z.boolean(),\n  jsonCompleted: z.boolean(),\n  executionCompleted: z.boolean(),\n  reviewCompleted: z.boolean(),\n  prCreated: z.boolean(),\n});\n\nconst lastErrorSchema = z.object({\n  category: z.string(),\n  message: z.string(),\n  at: z.string(),\n});\n\nexport const taskPlanSchema = z.object({\n  project: z.string(),\n  issueNumber: z.number().int().positive(),\n  issueUrl: z.string(),\n  branchName: z.string(),\n  noBranch: z.boolean().optional().default(false),\n  description: z.string(),\n  issueStatus: z.enum(['pending', 'in_progress', 'completed']),\n  completedAt: z.string().nullable(),\n  lastAttemptAt: z.string().nullable(),\n  lastError: lastErrorSchema.nullable(),\n  correctionCycle: z.number().int().min(0),\n  maxCorrectionCycles: z.number().int().min(0),\n  pipeline: pipelineStateSchema,\n  userStories: z.array(userStorySchema),\n});\n\nexport const headlessResultSchema = z.object({\n  success: z.boolean(),\n  result: z.string(),\n  cost: z\n    .object({\n      inputTokens: z.number().optional(),\n      outputTokens: z.number().optional(),\n    })\n    .nullable(),\n  error: z.string().nullable(),\n});\n\nexport type ValidatedTaskPlan = z.infer<typeof taskPlanSchema>;\nexport type ValidatedHeadlessResult = z.infer<typeof headlessResultSchema>;\n","import { copyFile, mkdtemp, readFile, rename, unlink, writeFile } from 'node:fs/promises';\nimport { tmpdir } from 'node:os';\nimport { join } from 'node:path';\nimport { ZodError } from 'zod';\nimport { taskPlanSchema } from '../schemas.js';\nimport type { LastError, PipelineState, TaskPlan } from '../types.js';\n\n/**\n * Get the current ISO timestamp.\n */\nexport function isoNow(): string {\n  return new Date().toISOString().replace(/\\.\\d{3}Z$/, 'Z');\n}\n\n/**\n * Load and parse a tasks.json file.\n * Validates that it has the expected structure.\n */\nexport async function loadTaskPlan(path: string): Promise<TaskPlan> {\n  const content = await readFile(path, 'utf-8');\n  const raw = JSON.parse(content);\n\n  try {\n    return taskPlanSchema.parse(raw) as TaskPlan;\n  } catch (err) {\n    if (err instanceof ZodError) {\n      const issues = err.issues.map((i) => `  - ${i.path.join('.')}: ${i.message}`).join('\\n');\n      throw new Error(`Invalid tasks.json at ${path}:\\n${issues}`);\n    }\n    throw err;\n  }\n}\n\n/**\n * Save a TaskPlan to disk atomically (write-to-temp + rename).\n * This prevents corruption if the process is interrupted during write.\n */\nexport async function saveTaskPlan(path: string, plan: TaskPlan): Promise<void> {\n  const tmpDir = await mkdtemp(join(tmpdir(), 'issue-flow-task-plan-'));\n  const tmpFile = join(tmpDir, 'tasks.json');\n\n  await writeFile(tmpFile, `${JSON.stringify(plan, null, 2)}\\n`, 'utf-8');\n\n  try {\n    await rename(tmpFile, path);\n  } catch (err: unknown) {\n    // EXDEV: rename fails across different devices/drives (common on Windows)\n    if ((err as NodeJS.ErrnoException).code === 'EXDEV') {\n      await copyFile(tmpFile, path);\n      await unlink(tmpFile);\n    } else {\n      throw err;\n    }\n  }\n}\n\n/**\n * Initialize default state fields on a TaskPlan.\n * Fills in missing fields with defaults, matching the Bash script behavior.\n */\nexport function initializeState(plan: TaskPlan): TaskPlan {\n  const defaultPipeline: PipelineState = {\n    prdCompleted: false,\n    jsonCompleted: false,\n    executionCompleted: false,\n    reviewCompleted: false,\n    prCreated: false,\n  };\n\n  return {\n    ...plan,\n    issueStatus: plan.issueStatus ?? 'pending',\n    completedAt: plan.completedAt ?? null,\n    lastAttemptAt: plan.lastAttemptAt ?? null,\n    lastError: plan.lastError ?? null,\n    correctionCycle: plan.correctionCycle ?? 0,\n    maxCorrectionCycles: plan.maxCorrectionCycles ?? 3,\n    pipeline: plan.pipeline ? { ...defaultPipeline, ...plan.pipeline } : defaultPipeline,\n  };\n}\n\n/**\n * Check if all user stories have passes=true.\n * Returns false if there are no stories.\n */\nexport function allStoriesPass(plan: TaskPlan): boolean {\n  if (plan.userStories.length === 0) {\n    return false;\n  }\n\n  return plan.userStories.every((story) => story.passes === true);\n}\n\n/**\n * Mark a specific story as passing.\n */\nexport function markStoryPassing(plan: TaskPlan, storyId: string): TaskPlan {\n  return {\n    ...plan,\n    userStories: plan.userStories.map((story) =>\n      story.id === storyId ? { ...story, passes: true } : story,\n    ),\n  };\n}\n\n/**\n * Mark the issue as in_progress.\n */\nexport function markIssueInProgress(plan: TaskPlan, timestamp?: string): TaskPlan {\n  const ts = timestamp ?? isoNow();\n  return {\n    ...plan,\n    issueStatus: 'in_progress',\n    completedAt: null,\n    lastAttemptAt: ts,\n  };\n}\n\n/**\n * Mark the issue as completed.\n */\nexport function markIssueCompleted(plan: TaskPlan): TaskPlan {\n  const ts = isoNow();\n  return {\n    ...plan,\n    issueStatus: 'completed',\n    completedAt: ts,\n    lastAttemptAt: ts,\n    lastError: null,\n    pipeline: plan.pipeline ? { ...plan.pipeline, executionCompleted: true } : plan.pipeline,\n  };\n}\n\n/**\n * Set the lastError field on the task plan.\n */\nexport function setLastError(plan: TaskPlan, category: string, message: string): TaskPlan {\n  const ts = isoNow();\n  const error: LastError = {\n    category,\n    message,\n    at: ts,\n  };\n\n  return {\n    ...plan,\n    lastAttemptAt: ts,\n    lastError: error,\n  };\n}\n\n/**\n * Clear the lastError field, but only if it was set before the attempt 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package/dist/{chunk-MWUIIUAS.js → chunk-ZJB2IMPU.js}

@@ -6,7 +6,7 @@ import {
   loadTaskPlan,
   saveTaskPlan,
   taskPlanSchema
-} from "./chunk-64FU2L2T.js";
+} from "./chunk-X5QCISNM.js";
 import {
   applyPlaceholders,
   loadPrompt
@@ -82,4 +82,4 @@ ${issues}`);
 export {
   runPlan
 };
-//# sourceMappingURL=chunk-MWUIIUAS.js.map
+//# sourceMappingURL=chunk-ZJB2IMPU.js.map

package/dist/cli.js

@@ -52,30 +52,30 @@ withGlobalOptions(
   process.exit(code);
 });
 withGlobalOptions(
-  program.command("run").description("Execute the full pipeline: analyze \u2192 prd \u2192 plan \u2192 execute \u2192 review \u2192 pr").argument("<issue>", "Issue number").option("--mode <mode>", "Execution mode: auto | manual", "auto").option("--from <phase>", "Resume from a specific phase")
+  program.command("run").description("Execute the full pipeline: prd \u2192 plan \u2192 execute \u2192 review \u2192 pr").argument("<issue>", "Issue number").option("--mode <mode>", "Execution mode: auto | manual", "auto").option("--from <phase>", "Resume from a specific phase").option("--no-branch", "Run pipeline on current branch without creating a new branch or PR")
 ).action(async (issue, options) => {
-  const { runPipeline } = await import("./run-PKHPULYL.js");
-  const code = await runPipeline(issue, options.mode, options.from);
+  const { runPipeline } = await import("./run-A44XQ77Z.js");
+  const code = await runPipeline(issue, options.mode, options.from, options.noBranch);
   process.exit(code);
 });
 withGlobalOptions(
   program.command("analyze").description("Analyze a GitHub issue via Claude Code Headless").argument("<issue>", "Issue number")
 ).action(async (issue) => {
-  const { runAnalyze } = await import("./analyze-3SN7ZAZU.js");
+  const { runAnalyze } = await import("./analyze-PDDIU7HD.js");
   const code = await runAnalyze(issue);
   process.exit(code);
 });
 withGlobalOptions(
   program.command("prd").description("Generate a PRD from an analyzed issue via Claude Code Headless").argument("<issue>", "Issue number")
 ).action(async (issue) => {
-  const { runPrd } = await import("./prd-ET2QN7GB.js");
+  const { runPrd } = await import("./prd-PZOY3FCC.js");
   const code = await runPrd(issue);
   process.exit(code);
 });
 withGlobalOptions(
   program.command("plan").description("Convert a PRD to a tasks.json task plan via Claude Code Headless").argument("<issue>", "Issue number")
 ).action(async (issue) => {
-  const { runPlan } = await import("./plan-HWZRG5GP.js");
+  const { runPlan } = await import("./plan-JUOBYTCD.js");
   const code = await runPlan(issue);
   process.exit(code);
 });
@@ -88,7 +88,7 @@ withGlobalOptions(
 ).action(
   async (positionalMaxIter, options) => {
     try {
-      const { runExecute } = await import("./execute-GIA4IKS5.js");
+      const { runExecute } = await import("./execute-WKYSGIGH.js");
       const code = await runExecute(positionalMaxIter, options);
       process.exit(code);
     } catch (error) {
@@ -100,14 +100,14 @@ withGlobalOptions(
 withGlobalOptions(
   program.command("review").description("Validate an issue resolution via Claude Code Headless").argument("<issue>", "Issue number")
 ).action(async (issue) => {
-  const { runReview } = await import("./review-3QDZCOMT.js");
+  const { runReview } = await import("./review-MK5FTVUE.js");
   const code = await runReview(issue);
   process.exit(code);
 });
 withGlobalOptions(
   program.command("pr").description("Create a pull request via Claude Code Headless").argument("<issue>", "Issue number")
 ).action(async (issue) => {
-  const { runPr } = await import("./pr-TTOFYUCV.js");
+  const { runPr } = await import("./pr-CYZYJZZV.js");
   const code = await runPr(issue);
   process.exit(code);
 });

package/dist/cli.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../src/cli.ts"],"sourcesContent":["import { createRequire } from 'node:module';\nimport { Command, InvalidArgumentError } from 'commander';\nimport { setGlobalTimeout, setVerbose } from './core/verbose.js';\nimport { printError } from './ui/logger.js';\n\nconst require = createRequire(import.meta.url);\nconst { version } = require('../package.json') as { version: string };\n\n/**\n * Parse a numeric string, throwing InvalidArgumentError if not a valid number.\n */\nfunction parseInteger(value: string): number {\n  const parsed = parseInt(value, 10);\n  if (Number.isNaN(parsed) || parsed < 0) {\n    throw new InvalidArgumentError('Must be a non-negative integer.');\n  }\n  return parsed;\n}\n\n/**\n * Add shared options (--verbose) to a subcommand.\n */\nfunction withGlobalOptions(cmd: Command): Command {\n  return cmd\n    .option('-v, --verbose', 'Show Claude progress output in real time')\n    .option(\n      '-t, --timeout <seconds>',\n      'Override headless timeout in seconds (0 = no limit)',\n      parseInteger,\n    );\n}\n\nconst program = new Command();\n\nprogram\n  .name('issue-flow')\n  .description(\n    'Unified CLI for orchestrating the full issue-flow pipeline via Claude Code Headless.',\n  )\n  .version(version);\n\nprogram.hook('preAction', (_thisCommand, actionCommand) => {\n  const opts = actionCommand.opts();\n  if (opts.verbose) {\n    setVerbose(true);\n  }\n  if (opts.timeout !== undefined) {\n    setGlobalTimeout(opts.timeout * 1000);\n  }\n});\n\n// ── init ────────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program.command('init').description('Verify that all prerequisites (claude, gh, git) are met'),\n).action(async () => {\n  const { runInit } = await import('./commands/init.js');\n  const code = await runInit();\n  process.exit(code);\n});\n\n// ── generate ────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('generate')\n    .description('Create a GitHub issue via Claude Code Headless')\n    .requiredOption('--prompt <text>', 'Issue description text'),\n).action(async (options: { prompt: string }) => {\n  const { runGenerate } = await import('./commands/generate.js');\n  const code = await runGenerate(options.prompt);\n  process.exit(code);\n});\n\n// ── run ─────────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('run')\n    .description('Execute the full pipeline: analyze → prd → plan → execute → review → pr')\n    .argument('<issue>', 'Issue number')\n    .option('--mode <mode>', 'Execution mode: auto | manual', 'auto')\n    .option('--from <phase>', 'Resume from a specific phase'),\n).action(async (issue: string, options: { mode: string; from?: string }) => {\n  const { runPipeline } = await import('./commands/run.js');\n  const code = await runPipeline(issue, options.mode, options.from);\n  process.exit(code);\n});\n\n// ── analyze ─────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('analyze')\n    .description('Analyze a GitHub issue via Claude Code Headless')\n    .argument('<issue>', 'Issue number'),\n).action(async (issue: string) => {\n  const { runAnalyze } = await import('./commands/analyze.js');\n  const code = await runAnalyze(issue);\n  process.exit(code);\n});\n\n// ── prd ─────────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('prd')\n    .description('Generate a PRD from an analyzed issue via Claude Code Headless')\n    .argument('<issue>', 'Issue number'),\n).action(async (issue: string) => {\n  const { runPrd } = await import('./commands/prd.js');\n  const code = await runPrd(issue);\n  process.exit(code);\n});\n\n// ── plan ────────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('plan')\n    .description('Convert a PRD to a tasks.json task plan via Claude Code Headless')\n    .argument('<issue>', 'Issue number'),\n).action(async (issue: string) => {\n  const { runPlan } = await import('./commands/plan.js');\n  const code = await runPlan(issue);\n  process.exit(code);\n});\n\n// ── execute ─────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('execute')\n    .description('Run the iterative story execution loop (issue-flow engine)')\n    .option('--issue <number>', 'Issue number — reads artifacts from issues/N/')\n    .option('--max-iterations <number>', 'Stop after N iterations', parseInteger)\n    .option(\n      '--retry-limit <number>',\n      'Retry transient Claude failures up to N consecutive times',\n      parseInteger,\n    )\n    .option('--retry-forever', 'Retry transient Claude failures indefinitely')\n    .argument('[max-iterations]', 'Backward-compatible alias for --max-iterations N', parseInteger),\n).action(\n  async (\n    positionalMaxIter: number | undefined,\n    options: {\n      issue?: string;\n      maxIterations?: number;\n      retryLimit?: number;\n      retryForever?: boolean;\n    },\n  ) => {\n    try {\n      const { runExecute } = await import('./commands/execute.js');\n      const code = await runExecute(positionalMaxIter, options);\n      process.exit(code);\n    } catch (error) {\n      printError(error instanceof Error ? error.message : String(error));\n      process.exit(1);\n    }\n  },\n);\n\n// ── review ──────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('review')\n    .description('Validate an issue resolution via Claude Code Headless')\n    .argument('<issue>', 'Issue number'),\n).action(async (issue: string) => {\n  const { runReview } = await import('./commands/review.js');\n  const code = await runReview(issue);\n  process.exit(code);\n});\n\n// ── pr 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+{"version":3,"sources":["../src/cli.ts"],"sourcesContent":["import { createRequire } from 'node:module';\nimport { Command, InvalidArgumentError } from 'commander';\nimport { setGlobalTimeout, setVerbose } from './core/verbose.js';\nimport { printError } from './ui/logger.js';\n\nconst require = createRequire(import.meta.url);\nconst { version } = require('../package.json') as { version: string };\n\n/**\n * Parse a numeric string, throwing InvalidArgumentError if not a valid number.\n */\nfunction parseInteger(value: string): number {\n  const parsed = parseInt(value, 10);\n  if (Number.isNaN(parsed) || parsed < 0) {\n    throw new InvalidArgumentError('Must be a non-negative integer.');\n  }\n  return parsed;\n}\n\n/**\n * Add shared options (--verbose) to a subcommand.\n */\nfunction withGlobalOptions(cmd: Command): Command {\n  return cmd\n    .option('-v, --verbose', 'Show Claude progress output in real time')\n    .option(\n      '-t, --timeout <seconds>',\n      'Override headless timeout in seconds (0 = no limit)',\n      parseInteger,\n    );\n}\n\nconst program = new Command();\n\nprogram\n  .name('issue-flow')\n  .description(\n    'Unified CLI for orchestrating the full issue-flow pipeline via Claude Code Headless.',\n  )\n  .version(version);\n\nprogram.hook('preAction', (_thisCommand, actionCommand) => {\n  const opts = actionCommand.opts();\n  if (opts.verbose) {\n    setVerbose(true);\n  }\n  if (opts.timeout !== undefined) {\n    setGlobalTimeout(opts.timeout * 1000);\n  }\n});\n\n// ── init ────────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program.command('init').description('Verify that all prerequisites (claude, gh, git) are met'),\n).action(async () => {\n  const { runInit } = await import('./commands/init.js');\n  const code = await runInit();\n  process.exit(code);\n});\n\n// ── generate ────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('generate')\n    .description('Create a GitHub issue via Claude Code Headless')\n    .requiredOption('--prompt <text>', 'Issue description text'),\n).action(async (options: { prompt: string }) => {\n  const { runGenerate } = await import('./commands/generate.js');\n  const code = await runGenerate(options.prompt);\n  process.exit(code);\n});\n\n// ── run ─────────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('run')\n    .description('Execute the full pipeline: prd → plan → execute → review → pr')\n    .argument('<issue>', 'Issue number')\n    .option('--mode <mode>', 'Execution mode: auto | manual', 'auto')\n    .option('--from <phase>', 'Resume from a specific phase')\n    .option('--no-branch', 'Run pipeline on current branch without creating a new branch or PR'),\n).action(async (issue: string, options: { mode: string; from?: string; noBranch?: boolean }) => {\n  const { runPipeline } = await import('./commands/run.js');\n  const code = await runPipeline(issue, options.mode, options.from, options.noBranch);\n  process.exit(code);\n});\n\n// ── analyze ─────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('analyze')\n    .description('Analyze a GitHub issue via Claude Code Headless')\n    .argument('<issue>', 'Issue number'),\n).action(async (issue: string) => {\n  const { runAnalyze } = await import('./commands/analyze.js');\n  const code = await runAnalyze(issue);\n  process.exit(code);\n});\n\n// ── prd ─────────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('prd')\n    .description('Generate a PRD from an analyzed issue via Claude Code Headless')\n    .argument('<issue>', 'Issue number'),\n).action(async (issue: string) => {\n  const { runPrd } = await import('./commands/prd.js');\n  const code = await runPrd(issue);\n  process.exit(code);\n});\n\n// ── plan ────────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('plan')\n    .description('Convert a PRD to a tasks.json task plan via Claude Code Headless')\n    .argument('<issue>', 'Issue number'),\n).action(async (issue: string) => {\n  const { runPlan } = await import('./commands/plan.js');\n  const code = await runPlan(issue);\n  process.exit(code);\n});\n\n// ── execute ─────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('execute')\n    .description('Run the iterative story execution loop (issue-flow engine)')\n    .option('--issue <number>', 'Issue number — reads artifacts from issues/N/')\n    .option('--max-iterations <number>', 'Stop after N iterations', parseInteger)\n    .option(\n      '--retry-limit <number>',\n      'Retry transient Claude failures up to N consecutive times',\n      parseInteger,\n    )\n    .option('--retry-forever', 'Retry transient Claude failures indefinitely')\n    .argument('[max-iterations]', 'Backward-compatible alias for --max-iterations N', parseInteger),\n).action(\n  async (\n    positionalMaxIter: number | undefined,\n    options: {\n      issue?: string;\n      maxIterations?: number;\n      retryLimit?: number;\n      retryForever?: boolean;\n    },\n  ) => {\n    try {\n      const { runExecute } = await import('./commands/execute.js');\n      const code = await runExecute(positionalMaxIter, options);\n      process.exit(code);\n    } catch (error) {\n      printError(error instanceof Error ? error.message : String(error));\n      process.exit(1);\n    }\n  },\n);\n\n// ── review ──────────────────────────────────────────────────────────────────\nwithGlobalOptions(\n  program\n    .command('review')\n    .description('Validate an issue resolution via Claude Code Headless')\n    .argument('<issue>', 'Issue number'),\n).action(async (issue: string) => {\n  const { runReview } = await 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package/dist/{execute-GIA4IKS5.js → execute-WKYSGIGH.js}

@@ -1,11 +1,11 @@
 #!/usr/bin/env node
 import {
   runExecute
-} from "./chunk-HYP64MZI.js";
-import "./chunk-64FU2L2T.js";
+} from "./chunk-LTPXKMPE.js";
+import "./chunk-X5QCISNM.js";
 import "./chunk-OZVHOVDT.js";
 import "./chunk-YAFHVFV5.js";
 export {
   runExecute
 };
-//# sourceMappingURL=execute-GIA4IKS5.js.map
+//# sourceMappingURL=execute-WKYSGIGH.js.map

package/dist/{plan-HWZRG5GP.js → plan-JUOBYTCD.js}

@@ -1,12 +1,12 @@
 #!/usr/bin/env node
 import {
   runPlan
-} from "./chunk-MWUIIUAS.js";
+} from "./chunk-ZJB2IMPU.js";
 import "./chunk-4OQ2ARLP.js";
-import "./chunk-64FU2L2T.js";
+import "./chunk-X5QCISNM.js";
 import "./chunk-OZVHOVDT.js";
 import "./chunk-YAFHVFV5.js";
 export {
   runPlan
 };
-//# sourceMappingURL=plan-HWZRG5GP.js.map
+//# sourceMappingURL=plan-JUOBYTCD.js.map

package/dist/{pr-TTOFYUCV.js → pr-CYZYJZZV.js}

@@ -1,12 +1,12 @@
 #!/usr/bin/env node
 import {
   runPr
-} from "./chunk-CYWHYPTU.js";
+} from "./chunk-65KDGHLM.js";
 import "./chunk-4OQ2ARLP.js";
-import "./chunk-64FU2L2T.js";
+import "./chunk-X5QCISNM.js";
 import "./chunk-OZVHOVDT.js";
 import "./chunk-YAFHVFV5.js";
 export {
   runPr
 };
-//# sourceMappingURL=pr-TTOFYUCV.js.map
+//# sourceMappingURL=pr-CYZYJZZV.js.map

package/dist/{prd-ET2QN7GB.js → prd-PZOY3FCC.js}

@@ -1,12 +1,12 @@
 #!/usr/bin/env node
 import {
   runPrd
-} from "./chunk-2JZCWJEQ.js";
+} from "./chunk-SKTTLX7R.js";
 import "./chunk-4OQ2ARLP.js";
-import "./chunk-64FU2L2T.js";
+import "./chunk-X5QCISNM.js";
 import "./chunk-OZVHOVDT.js";
 import "./chunk-YAFHVFV5.js";
 export {
   runPrd
 };
-//# sourceMappingURL=prd-ET2QN7GB.js.map
+//# sourceMappingURL=prd-PZOY3FCC.js.map

package/dist/{review-3QDZCOMT.js → review-MK5FTVUE.js}

@@ -1,12 +1,12 @@
 #!/usr/bin/env node
 import {
   runReview
-} from "./chunk-4PZXIOXD.js";
+} from "./chunk-HPSU5GGE.js";
 import "./chunk-4OQ2ARLP.js";
-import "./chunk-64FU2L2T.js";
+import "./chunk-X5QCISNM.js";
 import "./chunk-OZVHOVDT.js";
 import "./chunk-YAFHVFV5.js";
 export {
   runReview
 };
-//# sourceMappingURL=review-3QDZCOMT.js.map
+//# sourceMappingURL=review-MK5FTVUE.js.map

package/dist/{run-PKHPULYL.js → run-A44XQ77Z.js}

@@ -1,31 +1,28 @@
 #!/usr/bin/env node
-import {
-  runReview
-} from "./chunk-4PZXIOXD.js";
 import {
   runInit
 } from "./chunk-CSSXTPWE.js";
-import {
-  runAnalyze
-} from "./chunk-MEB3B2FI.js";
 import {
   runExecute
-} from "./chunk-HYP64MZI.js";
+} from "./chunk-LTPXKMPE.js";
 import {
   runPlan
-} from "./chunk-MWUIIUAS.js";
+} from "./chunk-ZJB2IMPU.js";
 import {
   runPr
-} from "./chunk-CYWHYPTU.js";
+} from "./chunk-65KDGHLM.js";
 import {
   runPrd
-} from "./chunk-2JZCWJEQ.js";
+} from "./chunk-SKTTLX7R.js";
+import {
+  runReview
+} from "./chunk-HPSU5GGE.js";
 import "./chunk-4OQ2ARLP.js";
 import {
   isoNow,
   loadTaskPlan,
   saveTaskPlan
-} from "./chunk-64FU2L2T.js";
+} from "./chunk-X5QCISNM.js";
 import "./chunk-OZVHOVDT.js";
 import {
   formatDuration,
@@ -45,16 +42,17 @@ import { execa } from "execa";
 // src/core/pipeline.ts
 var PIPELINE_PHASES = [
   "init",
-  "analyze",
   "prd",
   "plan",
   "execute",
   "review",
   "pr"
 ];
+var PIPELINE_PHASES_NO_BRANCH = PIPELINE_PHASES.filter(
+  (p) => p !== "pr"
+);
 var PHASE_TO_FIELD = {
   init: null,
-  analyze: "analyzeCompleted",
   prd: "prdCompleted",
   plan: "jsonCompleted",
   execute: "executionCompleted",
@@ -64,9 +62,11 @@ var PHASE_TO_FIELD = {
 var PipelineManager = class {
   tasksJsonPath;
   plan;
-  constructor(plan, tasksJsonPath) {
+  activePhases;
+  constructor(plan, tasksJsonPath, activePhases) {
     this.plan = plan;
     this.tasksJsonPath = tasksJsonPath;
+    this.activePhases = activePhases ?? PIPELINE_PHASES;
   }
   /**
    * Reload state from disk.
@@ -87,7 +87,7 @@ var PipelineManager = class {
    * Returns null if all phases are complete.
    */
   getNextPhase() {
-    for (const phase of PIPELINE_PHASES) {
+    for (const phase of this.activePhases) {
       if (!this.isPhaseComplete(phase)) {
         return phase;
       }
@@ -105,10 +105,10 @@ var PipelineManager = class {
    * All prerequisite phases must be complete.
    */
   canResume(fromPhase) {
-    const idx = PIPELINE_PHASES.indexOf(fromPhase);
+    const idx = this.activePhases.indexOf(fromPhase);
     if (idx < 0) return false;
     for (let i = 0; i < idx; i++) {
-      if (!this.isPhaseComplete(PIPELINE_PHASES[i])) {
+      if (!this.isPhaseComplete(this.activePhases[i])) {
         return false;
       }
     }
@@ -124,7 +124,6 @@ var PipelineManager = class {
       ...this.plan,
       pipeline: {
         ...this.plan.pipeline ?? {
-          analyzeCompleted: false,
           prdCompleted: false,
           jsonCompleted: false,
           executionCompleted: false,
@@ -141,7 +140,6 @@ var PipelineManager = class {
 // src/ui/pipeline-renderer.ts
 import { Listr, PRESET_TIMER, PRESET_TIMESTAMP } from "listr2";
 var PHASE_LABELS = {
-  analyze: "Analyze",
   prd: "PRD",
   plan: "Plan",
   execute: "Execute",
@@ -221,7 +219,7 @@ function buildExecutePhaseTask(runner, tasksPath, verbose) {
         timer: PRESET_TIMER,
         outputBar: verbose ? Infinity : false,
         persistentOutput: false,
-        bottomBar: verbose ? Infinity : 5
+        bottomBar: verbose ? Infinity : 3
       }
     };
     return task.newListr([engineSubtask, ...subtaskDefs], {
@@ -304,7 +302,9 @@ async function runPipelineWithRenderer(options) {
 }
 
 // src/commands/run.ts
-async function runPipeline(issue, mode, from) {
+var RUNNABLE_PHASES = ["prd", "plan", "execute", "review", "pr"];
+var RUNNABLE_PHASES_NO_BRANCH = ["prd", "plan", "execute", "review"];
+async function runPipeline(issue, mode, from, noBranch) {
   const issueNumber = issue.replace(/^#/, "");
   const issueDir = join("issues", issueNumber);
   const tasksPath = join(issueDir, "tasks.json");
@@ -315,17 +315,44 @@ async function runPipeline(issue, mode, from) {
     printError("Prerequisites not met. Fix the issues above and try again.");
     return 1;
   }
-  let startPhase = "analyze";
+  let effectiveNoBranch = noBranch ?? false;
+  try {
+    const existingPlan = await loadTaskPlan(tasksPath);
+    const persistedNoBranch = existingPlan.noBranch ?? false;
+    if (noBranch !== void 0 && noBranch !== persistedNoBranch) {
+      if (persistedNoBranch) {
+        printWarning(
+          "This pipeline was started with --no-branch. Ignoring current flag; using persisted mode."
+        );
+      } else {
+        printWarning(
+          "This pipeline was started without --no-branch. Ignoring current flag; using persisted mode."
+        );
+      }
+    }
+    effectiveNoBranch = persistedNoBranch;
+  } catch {
+  }
+  const activePhases = effectiveNoBranch ? PIPELINE_PHASES_NO_BRANCH : PIPELINE_PHASES;
+  const phaseOrder = effectiveNoBranch ? RUNNABLE_PHASES_NO_BRANCH : RUNNABLE_PHASES;
+  let startPhase = "prd";
   if (from) {
-    if (!PIPELINE_PHASES.includes(from)) {
-      printError(`Invalid phase: ${from}. Valid phases: ${PIPELINE_PHASES.join(", ")}`);
+    if (!activePhases.includes(from)) {
+      const validPhases = activePhases.filter((p) => p !== "init").join(", ");
+      if (effectiveNoBranch && PIPELINE_PHASES.includes(from)) {
+        printError(
+          `The '${from}' phase is not available in --no-branch mode. Valid phases: ${validPhases}`
+        );
+      } else {
+        printError(`Invalid phase: ${from}. Valid phases: ${validPhases}`);
+      }
       return 1;
     }
     startPhase = from;
   } else {
     try {
       const plan = await loadTaskPlan(tasksPath);
-      const mgr = new PipelineManager(plan, tasksPath);
+      const mgr = new PipelineManager(plan, tasksPath, activePhases);
       const nextPhase = mgr.getNextPhase();
       if (nextPhase && nextPhase !== "init") {
         startPhase = nextPhase;
@@ -337,19 +364,18 @@ async function runPipeline(issue, mode, from) {
   if (from) {
     try {
       const plan = await loadTaskPlan(tasksPath);
-      const mgr = new PipelineManager(plan, tasksPath);
+      const mgr = new PipelineManager(plan, tasksPath, activePhases);
       if (!mgr.canResume(startPhase)) {
         printError(`Cannot resume from ${startPhase}: prerequisite phases not complete`);
         return 1;
       }
     } catch {
-      if (startPhase !== "analyze") {
+      if (startPhase !== "prd") {
         printError(`Cannot resume from ${startPhase}: no pipeline state found`);
         return 1;
       }
     }
   }
-  const phaseOrder = ["analyze", "prd", "plan", "execute", "review", "pr"];
   const startIdx = phaseOrder.indexOf(startPhase);
   const makeRunner = (fn, phase) => async () => {
     const code = await fn();
@@ -358,9 +384,18 @@ async function runPipeline(issue, mode, from) {
     }
   };
   const runners = {
-    analyze: makeRunner(() => runAnalyze(issueNumber), "analyze"),
     prd: makeRunner(() => runPrd(issueNumber), "prd"),
-    plan: makeRunner(() => runPlan(issueNumber), "plan"),
+    plan: async () => {
+      await makeRunner(() => runPlan(issueNumber), "plan")();
+      if (effectiveNoBranch) {
+        try {
+          const plan = await loadTaskPlan(tasksPath);
+          plan.noBranch = true;
+          await saveTaskPlan(tasksPath, plan);
+        } catch {
+        }
+      }
+    },
     execute: makeRunner(() => runExecute(void 0, { issue: issueNumber }), "execute"),
     review: async () => {
       let maxCycles = 3;
@@ -410,15 +445,19 @@ async function runPipeline(issue, mode, from) {
     printWarning("Failed to close issue automatically");
   }
   let prUrl = "unknown";
-  try {
-    const proc = await execa("gh", ["pr", "list", "--head", "", "--json", "url", "--limit", "1"], {
-      reject: false
-    });
-    const parsed = JSON.parse(proc.stdout?.toString() ?? "[]");
-    if (parsed[0]?.url) {
-      prUrl = parsed[0].url;
+  if (!effectiveNoBranch) {
+    try {
+      const proc = await execa(
+        "gh",
+        ["pr", "list", "--head", "", "--json", "url", "--limit", "1"],
+        { reject: false }
+      );
+      const parsed = JSON.parse(proc.stdout?.toString() ?? "[]");
+      if (parsed[0]?.url) {
+        prUrl = parsed[0].url;
+      }
+    } catch {
     }
-  } catch {
   }
   let branchName = "unknown";
   try {
@@ -439,13 +478,15 @@ async function runPipeline(issue, mode, from) {
   const totalDuration = formatDuration(result.overallElapsedSeconds);
   console.log("");
   printSuccess(`Pipeline complete for issue #${issueNumber}!`);
-  console.log(`  Branch:   ${branchName}`);
+  console.log(`  Branch:   ${branchName}${effectiveNoBranch ? " (current)" : ""}`);
   console.log(`  Stories:  ${storyCount}`);
   console.log(`  Duration: ${totalDuration}`);
-  console.log(`  PR:       ${prUrl}`);
+  if (!effectiveNoBranch) {
+    console.log(`  PR:       ${prUrl}`);
+  }
   return 0;
 }
 export {
   runPipeline
 };
-//# sourceMappingURL=run-PKHPULYL.js.map
+//# sourceMappingURL=run-A44XQ77Z.js.map

package/dist/run-A44XQ77Z.js.map

@@ -0,0 +1 @@
+{"version":3,"sources":["../src/commands/run.ts","../src/core/pipeline.ts","../src/ui/pipeline-renderer.ts"],"sourcesContent":["import { join } from 'node:path';\nimport { execa } from 'execa';\nimport {\n  PIPELINE_PHASES,\n  PIPELINE_PHASES_NO_BRANCH,\n  PipelineManager,\n  type PipelinePhase,\n} from '../core/pipeline.js';\nimport { isoNow, loadTaskPlan, saveTaskPlan } from '../core/state-manager.js';\nimport { isVerbose } from '../core/verbose.js';\nimport { formatDuration, printError, printInfo, printSuccess, printWarning } from '../ui/logger.js';\nimport { runPipelineWithRenderer } from '../ui/pipeline-renderer.js';\nimport { runExecute } from './execute.js';\nimport { runInit } from './init.js';\nimport { runPlan } from './plan.js';\nimport { runPr } from './pr.js';\nimport { runPrd } from './prd.js';\nimport { runReview } from './review.js';\n\n/** Runnable phase lists (excluding 'init' which is handled separately). */\nconst RUNNABLE_PHASES: PipelinePhase[] = ['prd', 'plan', 'execute', 'review', 'pr'];\nconst RUNNABLE_PHASES_NO_BRANCH: PipelinePhase[] = ['prd', 'plan', 'execute', 'review'];\n\nexport async function runPipeline(\n  issue: string,\n  mode: string,\n  from?: string,\n  noBranch?: boolean,\n): Promise<number> {\n  const issueNumber = issue.replace(/^#/, '');\n  const issueDir = join('issues', issueNumber);\n  const tasksPath = join(issueDir, 'tasks.json');\n\n  printInfo(`Starting pipeline for issue #${issueNumber} (mode: ${mode})`);\n\n  // Phase 1: Init check\n  printInfo('Running prerequisite checks...');\n  const initCode = await runInit();\n  if (initCode !== 0) {\n    printError('Prerequisites not met. Fix the issues above and try again.');\n    return 1;\n  }\n\n  // Resolve noBranch mode: persisted value takes precedence on resume\n  let effectiveNoBranch = noBranch ?? false;\n  try {\n    const existingPlan = await loadTaskPlan(tasksPath);\n    const persistedNoBranch = existingPlan.noBranch ?? false;\n\n    // Only warn when the user explicitly passed a flag that conflicts with the persisted value\n    if (noBranch !== undefined && noBranch !== persistedNoBranch) {\n      if (persistedNoBranch) {\n        printWarning(\n          'This pipeline was started with --no-branch. Ignoring current flag; using persisted mode.',\n        );\n      } else {\n        printWarning(\n          'This pipeline was started without --no-branch. Ignoring current flag; using persisted mode.',\n        );\n      }\n    }\n\n    // Persisted mode wins on resume\n    effectiveNoBranch = persistedNoBranch;\n  } catch {\n    // No tasks.json yet — use the CLI flag as-is\n  }\n\n  const activePhases = effectiveNoBranch ? PIPELINE_PHASES_NO_BRANCH : PIPELINE_PHASES;\n  const phaseOrder = effectiveNoBranch ? RUNNABLE_PHASES_NO_BRANCH : RUNNABLE_PHASES;\n\n  // Determine starting phase\n  let startPhase: PipelinePhase = 'prd';\n  if (from) {\n    if (!(activePhases as readonly string[]).includes(from)) {\n      const validPhases = activePhases.filter((p) => p !== 'init').join(', ');\n      // Check if the phase exists in the full set but is excluded by --no-branch\n      if (effectiveNoBranch && (PIPELINE_PHASES as readonly string[]).includes(from)) {\n        printError(\n          `The '${from}' phase is not available in --no-branch mode. Valid phases: ${validPhases}`,\n        );\n      } else {\n        printError(`Invalid phase: ${from}. Valid phases: ${validPhases}`);\n      }\n      return 1;\n    }\n    startPhase = from as PipelinePhase;\n  } else {\n    // Try to auto-resume from pipeline state\n    try {\n      const plan = await loadTaskPlan(tasksPath);\n      const mgr = new PipelineManager(plan, tasksPath, activePhases);\n      const nextPhase = mgr.getNextPhase();\n      if (nextPhase && nextPhase !== 'init') {\n        startPhase = nextPhase;\n        printInfo(`Resuming from phase: ${startPhase}`);\n      }\n    } catch {\n      // No tasks.json yet — start from beginning\n    }\n  }\n\n  // Validate resume prerequisites if starting from a later phase\n  if (from) {\n    try {\n      const plan = await loadTaskPlan(tasksPath);\n      const mgr = new PipelineManager(plan, tasksPath, activePhases);\n      if (!mgr.canResume(startPhase)) {\n        printError(`Cannot resume from ${startPhase}: prerequisite phases not complete`);\n        return 1;\n      }\n    } catch {\n      if (startPhase !== 'prd') {\n        printError(`Cannot resume from ${startPhase}: no pipeline state found`);\n        return 1;\n      }\n    }\n  }\n\n  const startIdx = phaseOrder.indexOf(startPhase);\n\n  // Build phase runner functions that throw on failure\n  const makeRunner = (fn: () => Promise<number>, phase: string) => async () => {\n    const code = await fn();\n    if (code !== 0) {\n      throw new Error(`Phase ${phase} failed with exit code ${code}`);\n    }\n  };\n\n  const runners: Record<string, () => Promise<void>> = {\n    prd: makeRunner(() => runPrd(issueNumber), 'prd'),\n    plan: async () => {\n      await makeRunner(() => runPlan(issueNumber), 'plan')();\n      // Persist noBranch into the newly created tasks.json\n      if (effectiveNoBranch) {\n        try {\n          const plan = await loadTaskPlan(tasksPath);\n          plan.noBranch = true;\n          await saveTaskPlan(tasksPath, plan);\n        } catch {\n          /* non-critical: tasks.json may not exist yet if plan phase didn't create it */\n        }\n      }\n    },\n    execute: makeRunner(() => runExecute(undefined, { issue: issueNumber }), 'execute'),\n    review: async () => {\n      // Read maxCorrectionCycles\n      let maxCycles = 3;\n      try {\n        const plan = await loadTaskPlan(tasksPath);\n        maxCycles = plan.maxCorrectionCycles;\n      } catch {\n        /* use default */\n      }\n\n      let code = await runReview(issueNumber);\n\n      // Auto-correction loop on failure\n      let cycle = 0;\n      while (code !== 0 && cycle < maxCycles) {\n        cycle++;\n        printWarning(`Review failed. Starting correction cycle ${cycle}/${maxCycles}...`);\n\n        // Update correction cycle in tasks.json\n        try {\n          const plan = await loadTaskPlan(tasksPath);\n          plan.correctionCycle = cycle;\n          await saveTaskPlan(tasksPath, plan);\n        } catch {\n          /* non-critical */\n        }\n\n        // Re-execute\n        const execCode = await runExecute(undefined, { issue: issueNumber });\n        if (execCode !== 0) {\n          throw new Error('Correction execution failed');\n        }\n\n        // Re-review\n        code = await runReview(issueNumber);\n      }\n\n      if (code !== 0) {\n        throw new Error(`Review failed after ${maxCycles} correction cycles`);\n      }\n    },\n    pr: makeRunner(() => runPr(issueNumber), 'pr'),\n  };\n\n  // Run pipeline with listr2 renderer — startup header printed above, summary below\n  const result = await runPipelineWithRenderer({\n    phases: phaseOrder,\n    startIndex: startIdx,\n    verbose: isVerbose(),\n    runners,\n    tasksPath,\n  });\n\n  if (!result.success) {\n    printError(`Phase ${result.failedPhase} failed`);\n    return 1;\n  }\n\n  // Close the issue\n  printInfo('Closing issue...');\n  try {\n    await execa('gh', ['issue', 'close', issueNumber], { reject: false });\n  } catch {\n    printWarning('Failed to close issue automatically');\n  }\n\n  // Get PR URL for summary (skip in --no-branch mode)\n  let prUrl = 'unknown';\n  if (!effectiveNoBranch) {\n    try {\n      const proc = await execa(\n        'gh',\n        ['pr', 'list', '--head', '', '--json', 'url', '--limit', '1'],\n        { reject: false },\n      );\n      const parsed = JSON.parse(proc.stdout?.toString() ?? '[]');\n      if (parsed[0]?.url) {\n        prUrl = parsed[0].url;\n      }\n    } catch {\n      /* non-critical */\n    }\n  }\n\n  // Get branch and story count\n  let branchName = 'unknown';\n  try {\n    const proc = await execa('git', ['branch', '--show-current'], { reject: false });\n    branchName = proc.stdout?.toString().trim() ?? 'unknown';\n  } catch {\n    /* non-critical */\n  }\n\n  let storyCount = 0;\n  try {\n    const plan = await loadTaskPlan(tasksPath);\n    storyCount = plan.userStories.length;\n\n    // Mark as completed\n    plan.issueStatus = 'completed';\n    plan.completedAt = isoNow();\n    plan.lastAttemptAt = isoNow();\n    await saveTaskPlan(tasksPath, plan);\n  } catch {\n    /* non-critical */\n  }\n\n  const totalDuration = formatDuration(result.overallElapsedSeconds);\n\n  console.log('');\n  printSuccess(`Pipeline complete for issue #${issueNumber}!`);\n  console.log(`  Branch:   ${branchName}${effectiveNoBranch ? ' (current)' : ''}`);\n  console.log(`  Stories:  ${storyCount}`);\n  console.log(`  Duration: ${totalDuration}`);\n  if (!effectiveNoBranch) {\n    console.log(`  PR:       ${prUrl}`);\n  }\n\n  return 0;\n}\n","import type { PipelineState, TaskPlan } from '../types.js';\nimport { loadTaskPlan, saveTaskPlan } from './state-manager.js';\n\n/**\n * Ordered pipeline phases. Each phase must complete before the next can start.\n */\nexport const PIPELINE_PHASES = [\n  'init',\n  'prd',\n  'plan',\n  'execute',\n  'review',\n  'pr',\n] as const;\n\nexport type PipelinePhase = (typeof PIPELINE_PHASES)[number];\n\n/**\n * Pipeline phases excluding the 'pr' phase, for --no-branch mode.\n */\nexport const PIPELINE_PHASES_NO_BRANCH = PIPELINE_PHASES.filter(\n  (p): p is Exclude<PipelinePhase, 'pr'> => p !== 'pr',\n);\n\n/**\n * Map pipeline phases to their corresponding PipelineState field.\n * 'init' has no persisted state — it's a runtime-only check.\n */\nconst PHASE_TO_FIELD: Record<PipelinePhase, keyof PipelineState | null> = {\n  init: null,\n  prd: 'prdCompleted',\n  plan: 'jsonCompleted',\n  execute: 'executionCompleted',\n  review: 'reviewCompleted',\n  pr: 'prCreated',\n};\n\nexport class PipelineManager {\n  private tasksJsonPath: string;\n  private plan: TaskPlan;\n  private activePhases: readonly PipelinePhase[];\n\n  constructor(plan: TaskPlan, tasksJsonPath: string, activePhases?: readonly PipelinePhase[]) {\n    this.plan = plan;\n    this.tasksJsonPath = tasksJsonPath;\n    this.activePhases = activePhases ?? PIPELINE_PHASES;\n  }\n\n  /**\n   * Reload state from disk.\n   */\n  async reload(): Promise<void> {\n    this.plan = await loadTaskPlan(this.tasksJsonPath);\n  }\n\n  /**\n   * Check if a phase is complete.\n   */\n  isPhaseComplete(phase: PipelinePhase): boolean {\n    const field = PHASE_TO_FIELD[phase];\n    if (field === null) return true; // init is always \"complete\" after running\n    return this.plan.pipeline?.[field] ?? false;\n  }\n\n  /**\n   * Get the first incomplete phase in the pipeline.\n   * Returns null if all phases are complete.\n   */\n  getNextPhase(): PipelinePhase | null {\n    for (const phase of this.activePhases) {\n      if (!this.isPhaseComplete(phase)) {\n        return phase;\n      }\n    }\n    return null;\n  }\n\n  /**\n   * Get the current phase (alias for getNextPhase).\n   */\n  getCurrentPhase(): PipelinePhase | null {\n    return this.getNextPhase();\n  }\n\n  /**\n   * Check whether we can resume from a specific phase.\n   * All prerequisite phases must be complete.\n   */\n  canResume(fromPhase: PipelinePhase): boolean {\n    const idx = this.activePhases.indexOf(fromPhase);\n    if (idx < 0) return false;\n\n    // All active phases before fromPhase must be complete\n    for (let i = 0; i < idx; i++) {\n      if (!this.isPhaseComplete(this.activePhases[i])) {\n        return false;\n      }\n    }\n    return true;\n  }\n\n  /**\n   * Mark a phase as complete and persist to disk.\n   */\n  async markPhaseComplete(phase: PipelinePhase): Promise<void> {\n    const field = PHASE_TO_FIELD[phase];\n    if (field === null) return; // init has no persisted state\n\n    this.plan = {\n      ...this.plan,\n      pipeline: {\n        ...(this.plan.pipeline ?? {\n          prdCompleted: false,\n          jsonCompleted: false,\n          executionCompleted: false,\n          reviewCompleted: false,\n          prCreated: false,\n        }),\n        [field]: true,\n      },\n    };\n\n    await saveTaskPlan(this.tasksJsonPath, this.plan);\n  }\n}\n","import { Listr, type ListrTask, PRESET_TIMER, PRESET_TIMESTAMP } from 'listr2';\nimport type { PipelinePhase } from '../core/pipeline.js';\nimport { loadTaskPlan } from '../core/state-manager.js';\nimport { setOutputCallback, setStoryUpdateCallback } from '../core/verbose.js';\nimport type { UserStory } from '../types.js';\n\n/** Minimal interface for the listr2 task wrapper properties we use. */\ninterface TaskContext {\n  title: string;\n  output: string;\n  newListr(tasks: ListrTask[], options?: Record<string, unknown>): Listr;\n}\n\n/**\n * Result returned after the pipeline renderer finishes.\n */\nexport interface PipelineResult {\n  success: boolean;\n  failedPhase?: string;\n  overallElapsedSeconds: number;\n}\n\n/**\n * Options for runPipelineWithRenderer.\n */\nexport interface PipelineRendererOptions {\n  /** All pipeline phases in order */\n  phases: PipelinePhase[];\n  /** Index of the first phase to run (phases before this are skipped) */\n  startIndex: number;\n  /** Whether verbose mode is enabled */\n  verbose: boolean;\n  /** Map of phase name to its async runner function */\n  runners: Record<string, () => Promise<void>>;\n  /** Path to tasks.json — enables execute-phase subtask progress when set */\n  tasksPath?: string;\n}\n\n/**\n * Phase labels for display.\n */\nconst PHASE_LABELS: Record<string, string> = {\n  prd: 'PRD',\n  plan: 'Plan',\n  execute: 'Execute',\n  review: 'Review',\n  pr: 'PR',\n};\n\n/**\n * Select the appropriate listr2 renderer based on environment.\n *\n * - TTY + not verbose -> 'default' (animated spinners)\n * - TTY + verbose -> 'verbose' (sequential lines)\n * - Non-TTY / CI -> 'simple' (plain timestamped output)\n *\n * NO_COLOR is handled by listr2's own color support and the useColor() utility,\n * not by switching renderers — a TTY with NO_COLOR still benefits from the\n * default renderer's layout and spinners.\n */\nfunction selectRenderer(verbose: boolean): 'default' | 'verbose' | 'simple' {\n  const isTTY = !!process.stdout.isTTY;\n  const isCI = !!process.env.CI;\n\n  if (!isTTY || isCI) {\n    return 'simple';\n  }\n\n  return verbose ? 'verbose' : 'default';\n}\n\n/**\n * Build the execute phase task with dynamic subtasks for each user story.\n *\n * Stories that already pass are displayed as skipped. Pending stories wait for\n * the engine to complete them via the story update callback. The parent task\n * title is updated with aggregate progress (e.g., \"Execute (3/5 stories passing)\").\n */\nfunction buildExecutePhaseTask(runner: () => Promise<void>, tasksPath: string, verbose: boolean) {\n  return async (_ctx: unknown, task: TaskContext) => {\n    let stories: UserStory[];\n    try {\n      const plan = await loadTaskPlan(tasksPath);\n      stories = [...plan.userStories].sort((a, b) => a.priority - b.priority);\n    } catch {\n      // If we can't read the plan, fall back to running without subtasks\n      setOutputCallback((line: string) => {\n        task.output = line;\n      });\n      try {\n        await runner();\n      } finally {\n        setOutputCallback(undefined);\n      }\n      return;\n    }\n\n    const totalStories = stories.length;\n    const initialPassed = stories.filter((s) => s.passes).length;\n    task.title = `Execute (${initialPassed}/${totalStories} stories passing)`;\n\n    // Create promise resolvers for pending stories\n    const resolvers = new Map<string, { resolve: () => void; reject: (err: Error) => void }>();\n\n    // Set up story update callback — engine calls this after each iteration\n    setStoryUpdateCallback((updatedStories: UserStory[]) => {\n      const passed = updatedStories.filter((s) => s.passes).length;\n      task.title = `Execute (${passed}/${totalStories} stories passing)`;\n\n      for (const s of updatedStories) {\n        if (s.passes && resolvers.has(s.id)) {\n          resolvers.get(s.id)!.resolve();\n          resolvers.delete(s.id);\n        }\n      }\n    });\n\n    // Build subtask definitions for each story\n    const subtaskDefs = stories.map((story) => ({\n      title: `${story.id}: ${story.title}`,\n      skip: story.passes ? 'already passing' : false,\n      // eslint-disable-next-line @typescript-eslint/no-explicit-any\n      task: async () => {\n        await new Promise<void>((resolve, reject) => {\n          resolvers.set(story.id, { resolve, reject });\n        });\n      },\n      rendererOptions: {\n        timer: PRESET_TIMER,\n      },\n    }));\n\n    // Engine runner subtask — drives the execution loop\n    const engineSubtask = {\n      title: 'Running engine',\n      task: async (_c: unknown, engineTask: TaskContext) => {\n        setOutputCallback((line: string) => {\n          engineTask.output = line;\n        });\n        try {\n          await runner();\n        } finally {\n          setOutputCallback(undefined);\n          setStoryUpdateCallback(undefined);\n          // Resolve any remaining pending stories (engine finished successfully)\n          for (const [, { resolve }] of resolvers) {\n            resolve();\n          }\n          resolvers.clear();\n        }\n      },\n      rendererOptions: {\n        timer: PRESET_TIMER,\n        outputBar: verbose ? Infinity : false,\n        persistentOutput: false,\n        bottomBar: verbose ? 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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "issue-flow",
-  "version": "0.4.2",
+  "version": "0.4.4",
   "description": "Unified CLI for orchestrating the full issue-flow pipeline via Claude Code Headless",
   "type": "module",
   "bin": {

package/prompts/prd.md

@@ -1,9 +1,10 @@
-You are generating a Product Requirements Document (PRD) for GitHub issue #__ISSUE_NUMBER__ in this repository.__ANALYSIS_CONTEXT__
+You are generating a Product Requirements Document (PRD) for GitHub issue #__ISSUE_NUMBER__ in this repository.
 
 Steps:
-1. If no analysis was provided above, fetch the issue data using: gh issue view __ISSUE_NUMBER__ --json title,body,labels,comments
-2. Analyze the codebase to understand the context
-3. Generate a structured PRD
+1. Fetch the issue data using: gh issue view __ISSUE_NUMBER__ --json title,body,labels,comments
+2. If the file issues/__ISSUE_NUMBER__/analysis.md exists, read it for additional context
+3. Analyze the codebase to understand the context
+4. Generate a structured PRD
 
 Save the PRD to __PRD_PATH__ with this structure:
 

package/dist/analyze-3SN7ZAZU.js

@@ -1,12 +0,0 @@
-#!/usr/bin/env node
-import {
-  runAnalyze
-} from "./chunk-MEB3B2FI.js";
-import "./chunk-4OQ2ARLP.js";
-import "./chunk-64FU2L2T.js";
-import "./chunk-OZVHOVDT.js";
-import "./chunk-YAFHVFV5.js";
-export {
-  runAnalyze
-};
-//# sourceMappingURL=analyze-3SN7ZAZU.js.map

package/dist/chunk-2JZCWJEQ.js.map

@@ -1 +0,0 @@
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package/dist/chunk-64FU2L2T.js.map

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package/dist/chunk-HYP64MZI.js.map

@@ -1 +0,0 @@
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DEFAULTS.backoffMaxSeconds,\n  };\n}\n\n/**\n * Resolve file paths based on issue number and project root.\n *\n * With --issue N:\n *   prdFile = {projectRoot}/issues/{N}/tasks.json\n *   progressFile = {projectRoot}/issues/{N}/progress.txt\n *\n * Standalone:\n *   prdFile = {projectRoot}/prd.json\n *   progressFile = {projectRoot}/progress.txt\n */\nexport async function resolvePaths(\n  config: EngineConfig,\n  scriptDir?: string,\n): Promise<ResolvedPaths> {\n  const projectRoot = await getProjectRoot();\n\n  if (config.issueNumber) {\n    const issueDir = join(projectRoot, 'issues', config.issueNumber);\n    return {\n      prdFile: join(issueDir, 'tasks.json'),\n      progressFile: join(issueDir, 'progress.txt'),\n      archiveDir: join(issueDir, 'archive'),\n      lastBranchFile: join(issueDir, '.last-branch'),\n      projectRoot,\n    };\n  }\n\n  // Standalone mode — use scriptDir if available, otherwise projectRoot\n  const base = scriptDir ?? projectRoot;\n  return {\n    prdFile: join(base, 'prd.json'),\n    progressFile: join(base, 'progress.txt'),\n    archiveDir: join(base, 'archive'),\n    lastBranchFile: join(base, '.last-branch'),\n    projectRoot,\n  };\n}\n\n/**\n * Return a platform-appropriate install hint for a given package.\n */\nexport function getInstallHint(pkg: string): string {\n  const os = platform();\n\n  if (os === 'darwin') {\n    return `brew install ${pkg}`;\n  }\n  if (os === 'linux') {\n    return `apt install ${pkg}  (or your distro's package manager)`;\n  }\n  if (os === 'win32') {\n    return `winget install ${pkg}  (or choco install ${pkg})`;\n  }\n\n  return `install ${pkg} using your system package manager`;\n}\n\n/**\n * Validate that required external dependencies are available.\n * Returns an array of error messages (empty if all deps are found).\n */\nexport async function validateDependencies(): Promise<string[]> {\n  const errors: string[] = [];\n\n  // Check git\n  const gitResult = await run('git', ['--version']);\n  if (gitResult.exitCode !== 0) {\n    errors.push(`  - git  (install with: ${getInstallHint('git')})`);\n  }\n\n  // Check claude\n  const claudeResult = await run('claude', ['--version']);\n  if (claudeResult.exitCode !== 0) {\n    errors.push('  - claude  (install with: npm install -g @anthropic-ai/claude-code)');\n  }\n\n  // Note: jq is NOT required — the TypeScript CLI handles JSON natively\n\n  return errors;\n}\n","import { type Options as ExecaOptions, execa } from 'execa';\n\nexport interface ExecResult {\n  stdout: string;\n  stderr: string;\n  exitCode: number;\n}\n\n/**\n * Execute a command with arguments and capture its output.\n * Uses execa which calls execFile internally (no shell injection risk).\n * Does not throw on non-zero exit codes.\n */\nexport async function run(\n  command: string,\n  args: string[] = [],\n  options?: ExecaOptions,\n): Promise<ExecResult> {\n  const result = await execa(command, args, {\n    reject: false,\n    ...options,\n  });\n\n  return {\n    stdout: result.stdout?.toString() ?? '',\n    stderr: result.stderr?.toString() ?? '',\n    exitCode: result.exitCode ?? 1,\n  };\n}\n","import { run } from './shell.js';\n\n/**\n * Get the root directory of the current git repository.\n * Throws if not inside a git repository.\n */\nexport async function getProjectRoot(): Promise<string> {\n  const result = await run('git', ['rev-parse', '--show-toplevel']);\n\n  if (result.exitCode !== 0) {\n    throw new Error(\n      'Not inside a git repository. Please run issue-flow from within a git project.',\n    );\n  }\n\n  return result.stdout.trim();\n}\n\n/**\n * Get the current git branch name.\n * Returns an empty string if in detached HEAD state.\n */\nexport async function getCurrentBranch(): Promise<string> {\n  const result = await run('git', ['branch', '--show-current']);\n\n  if (result.exitCode !== 0) {\n    throw new Error(\n      'Failed to detect git branch. Ensure git is installed and you are inside a repository.',\n    );\n  }\n\n  return result.stdout.trim();\n}\n","import { existsSync } from 'node:fs';\nimport { cp, mkdir, readFile, writeFile } from 'node:fs/promises';\nimport { join } from 'node:path';\nimport type { EngineConfig, ResolvedPaths, TaskPlan } from '../types.js';\nimport { printError, printInfo, printRetry, printSuccess, printWarning } from '../ui/logger.js';\nimport { printIterationHeader } from '../ui/progress.js';\nimport { printStartupHeader, printSummaryBox } from '../ui/summary.js';\nimport { isTransientFailure, retryDelaySeconds } from '../utils/retry.js';\nimport { executeClaude } from './executor.js';\nimport { applyPlaceholders, loadPrompt } from './prompt-resolver.js';\nimport {\n  allStoriesPass,\n  clearLastError,\n  initializeState,\n  isoNow,\n  loadTaskPlan,\n  markIssueCompleted,\n  markIssueInProgress,\n  saveTaskPlan,\n  setLastError,\n  trimErrorMessage,\n} from './state-manager.js';\nimport { getOutputCallback, getStoryUpdateCallback } from './verbose.js';\n\n/**\n * Sleep for a given number of seconds.\n */\nfunction sleep(seconds: number): Promise<void> {\n  return new Promise((resolve) => setTimeout(resolve, seconds * 1000));\n}\n\n/**\n * Emit a message through the output callback if available, otherwise console.log.\n * Used for bare console.log calls in engine functions so they route through listr2.\n */\nfunction emitLog(message: string): void {\n  const cb = getOutputCallback();\n  if (cb) {\n    // Skip empty lines in listr2 context — they don't render meaningfully\n    if (message) {\n      cb(message);\n    }\n  } else {\n    console.log(message);\n  }\n}\n\n/**\n * Initialize the progress file if it doesn't exist.\n */\nasync function ensureProgressFile(progressFile: string): Promise<void> {\n  if (!existsSync(progressFile)) {\n    const content = `# Issue Flow Progress Log\\nStarted: ${new Date().toString()}\\n---\\n`;\n    await writeFile(progressFile, content, 'utf-8');\n  }\n}\n\n/**\n * Archive previous run artifacts if the branch has changed.\n */\nasync function archiveIfBranchChanged(plan: TaskPlan, paths: ResolvedPaths): Promise<void> {\n  const { lastBranchFile, archiveDir, prdFile, progressFile } = paths;\n\n  if (!existsSync(lastBranchFile)) {\n    return;\n  }\n\n  const currentBranch = plan.branchName ?? '';\n  let lastBranch = '';\n\n  try {\n    lastBranch = (await readFile(lastBranchFile, 'utf-8')).trim();\n  } catch {\n    return;\n  }\n\n  if (currentBranch && lastBranch && currentBranch !== lastBranch) {\n    const dateStr = new Date().toISOString().split('T')[0];\n    const folderName = lastBranch.replace(/^issue\\//, '').replace(/[<>:\"|?*\\\\]/g, '_');\n    const archiveFolder = join(archiveDir, `${dateStr}-${folderName}`);\n\n    printInfo(`Archiving previous run: ${lastBranch}`);\n    await mkdir(archiveFolder, { recursive: true });\n\n    if (existsSync(prdFile)) {\n      await cp(prdFile, join(archiveFolder, 'tasks.json'));\n    }\n    if (existsSync(progressFile)) {\n      await cp(progressFile, join(archiveFolder, 'progress.txt'));\n    }\n\n    printInfo(`   Archived to: ${archiveFolder}`);\n\n    // Reset progress file for new run\n    await writeFile(\n      progressFile,\n      `# Issue Flow Progress Log\\nStarted: ${new Date().toString()}\\n---\\n`,\n      'utf-8',\n    );\n  }\n}\n\n/**\n * Write the current branch to the last-branch tracking file.\n */\nasync function trackBranch(plan: TaskPlan, lastBranchFile: string): Promise<void> {\n  const branch = plan.branchName ?? '';\n  if (branch) {\n    await writeFile(lastBranchFile, `${branch}\\n`, 'utf-8');\n  }\n}\n\n/**\n * Run the issue-flow engine loop.\n *\n * This replicates the full execution flow:\n * 1. Load and initialize task plan state\n * 2. Check for early exit (already complete)\n * 3. Archive previous run if branch changed\n * 4. Resolve prompt\n * 5. Main loop: iterate, execute Claude, handle results\n * 6. Print summary\n */\nexport async function runEngine(config: EngineConfig, paths: ResolvedPaths): Promise<number> {\n  // Load task plan\n  if (!existsSync(paths.prdFile)) {\n    printError(`PRD file not found at ${paths.prdFile}`);\n    if (config.issueNumber) {\n      emitLog(`Have you run the resolve-issue skill for issue #${config.issueNumber} first?`);\n    }\n    return 1;\n  }\n\n  let plan = await loadTaskPlan(paths.prdFile);\n  plan = initializeState(plan);\n  await saveTaskPlan(paths.prdFile, plan);\n\n  // Check if already completed\n  if (plan.issueStatus === 'completed' && allStoriesPass(plan)) {\n    emitLog(`Issue already marked complete in ${paths.prdFile}`);\n    return 0;\n  }\n\n  // Warn if marked complete but stories still pending\n  if (plan.issueStatus === 'completed' && !allStoriesPass(plan)) {\n    printWarning(\n      'Issue marked completed but some stories are still pending. Resetting to in_progress.',\n    );\n    plan = markIssueInProgress(plan);\n    plan = setLastError(\n      plan,\n      'invalid_completion_state',\n      'tasks.json claimed the issue was completed before every story had passes=true.',\n    );\n    await saveTaskPlan(paths.prdFile, plan);\n  }\n\n  // Check if all stories already pass\n  if (allStoriesPass(plan)) {\n    emitLog('All user stories already pass. Marking issue as completed.');\n    plan = markIssueCompleted(plan);\n    await saveTaskPlan(paths.prdFile, plan);\n    return 0;\n  }\n\n  // Archive previous run if branch changed\n  await archiveIfBranchChanged(plan, paths);\n\n  // Track current branch\n  await trackBranch(plan, paths.lastBranchFile);\n\n  // Initialize progress file\n  await ensureProgressFile(paths.progressFile);\n\n  // Load prompt template\n  const promptTemplate = await loadPrompt('execute');\n\n  // Print startup header\n  printStartupHeader(config, plan);\n\n  const startTime = Date.now();\n  let i = 0;\n  let retryCount = 0;\n  let totalRetryCount = 0;\n\n  // Main loop\n  while (true) {\n    // Check iteration limit\n    if (config.maxIterations !== undefined && i >= config.maxIterations) {\n      break;\n    }\n\n    i++;\n\n    // Re-read plan to get latest state\n    plan = await loadTaskPlan(paths.prdFile);\n\n    printIterationHeader(i, config.maxIterations, plan.userStories);\n\n    // Apply placeholders to prompt\n    const prompt = applyPlaceholders(promptTemplate, {\n      __PRD_FILE__: paths.prdFile,\n      __PROGRESS_FILE__: paths.progressFile,\n    });\n\n    const iterationStartedAt = isoNow();\n    plan = markIssueInProgress(plan, iterationStartedAt);\n    await saveTaskPlan(paths.prdFile, plan);\n\n    // Execute Claude\n    const result = await executeClaude(prompt);\n\n    if (result.exitCode !== 0) {\n      const errorMessage = trimErrorMessage(result.output);\n\n      if (isTransientFailure(result.exitCode, result.output)) {\n        retryCount++;\n        totalRetryCount++;\n        plan = await loadTaskPlan(paths.prdFile);\n        plan = setLastError(plan, 'transient_claude_failure', errorMessage);\n        await saveTaskPlan(paths.prdFile, plan);\n\n        if (!config.retryForever && retryCount > config.retryLimit) {\n          const elapsed = Math.floor((Date.now() - startTime) / 1000);\n          plan = await loadTaskPlan(paths.prdFile);\n          printSummaryBox(\n            'failed',\n            i,\n            totalRetryCount,\n            elapsed,\n            plan,\n            `Exceeded retry limit (${config.retryLimit}) on transient errors`,\n          );\n          return result.exitCode;\n        }\n\n        const delaySeconds = retryDelaySeconds(\n          retryCount,\n          config.backoffBaseSeconds,\n          config.backoffMaxSeconds,\n        );\n\n        emitLog('');\n        printRetry(\n          `Transient Claude failure on iteration ${i} (attempt ${retryCount}). Retrying in ${delaySeconds}s.`,\n        );\n\n        // Stay within current iteration budget\n        i--;\n        await sleep(delaySeconds);\n        continue;\n      }\n\n      // Fatal failure\n      plan = await loadTaskPlan(paths.prdFile);\n      plan = setLastError(plan, 'fatal_claude_failure', errorMessage);\n      await saveTaskPlan(paths.prdFile, plan);\n\n      const elapsed = Math.floor((Date.now() - startTime) / 1000);\n      printSummaryBox(\n        'failed',\n        i,\n        totalRetryCount,\n        elapsed,\n        plan,\n        `Claude CLI failed with exit code ${result.exitCode}`,\n      );\n      return result.exitCode;\n    }\n\n    // Success — reset retry counter\n    retryCount = 0;\n    plan = await loadTaskPlan(paths.prdFile);\n    plan = clearLastError(plan, iterationStartedAt);\n    await saveTaskPlan(paths.prdFile, plan);\n\n    // Notify story progress listeners (e.g., listr2 subtasks)\n    const storyUpdateCb = getStoryUpdateCallback();\n    if (storyUpdateCb) {\n      storyUpdateCb(plan.userStories);\n    }\n\n    // Check for completion signal\n    if (result.output.includes('<promise>COMPLETE</promise>')) {\n      plan = await loadTaskPlan(paths.prdFile);\n      if (allStoriesPass(plan)) {\n        plan = markIssueCompleted(plan);\n        await saveTaskPlan(paths.prdFile, plan);\n\n        const elapsed = Math.floor((Date.now() - startTime) / 1000);\n        printSummaryBox('success', i, totalRetryCount, elapsed, plan);\n        return 0;\n      }\n\n      plan = setLastError(\n        plan,\n        'invalid_completion_signal',\n        'Claude returned <promise>COMPLETE</promise> before every story had passes=true.',\n      );\n      await saveTaskPlan(paths.prdFile, plan);\n\n      emitLog('');\n      printWarning(\n        'Claude returned a completion signal, but tasks.json still has pending stories. Ignoring completion and continuing.',\n      );\n    }\n\n    printSuccess(`Iteration ${i} complete. Continuing...`);\n    await sleep(2);\n  }\n\n  // Reached max iterations\n  const elapsed = Math.floor((Date.now() - startTime) / 1000);\n  plan = await loadTaskPlan(paths.prdFile);\n  printSummaryBox(\n    'incomplete',\n    config.maxIterations ?? i,\n    totalRetryCount,\n    elapsed,\n    plan,\n    'Reached max iterations without completing all tasks.',\n  );\n  return 1;\n}\n","import chalk from 'chalk';\nimport { getOutputCallback } from '../core/verbose.js';\nimport type { UserStory } from '../types.js';\nimport { getIcons, useColor, useUnicode } from './logger.js';\n\n/**\n * Print a visual progress bar showing passed/total stories.\n */\nexport function printProgressBar(passed: number, total: number): string {\n  const barWidth = 20;\n  let pct = 0;\n  let filled = 0;\n\n  if (total > 0) {\n    pct = Math.floor((passed * 100) / total);\n    filled = Math.floor((passed * barWidth) / total);\n  }\n\n  const empty = barWidth - filled;\n  const fillChar = useUnicode() ? '\\u2588' : '#';\n  const emptyChar = useUnicode() ? '\\u2591' : '-';\n\n  const bar = fillChar.repeat(filled) + emptyChar.repeat(empty);\n  const text = `${passed}/${total} (${pct}%)`;\n\n  if (useColor()) {\n    return `${chalk.green(bar)} ${text}`;\n  }\n  return `${bar} ${text}`;\n}\n\n/**\n * Print the iteration header showing story statuses and progress bar.\n *\n * When a global output callback is set (e.g., inside a listr2 task),\n * output is routed through it instead of console.log.\n */\nexport function printIterationHeader(\n  iteration: number,\n  maxIter: number | undefined,\n  stories: UserStory[],\n): void {\n  const icons = getIcons();\n  const colored = useColor();\n  const cb = getOutputCallback();\n\n  const iterLabel = maxIter ? `Iteration ${iteration} of ${maxIter}` : `Iteration ${iteration}`;\n\n  const total = stories.length;\n  const passed = stories.filter((s) => s.passes).length;\n\n  const lines: string[] = [];\n\n  if (colored) {\n    lines.push(chalk.blue(`\\u2501\\u2501\\u2501 ${icons.start} ${iterLabel} \\u2501\\u2501\\u2501`));\n  } else {\n    lines.push(`--- ${icons.start} ${iterLabel} ---`);\n  }\n\n  // Display each story status\n  let foundFirstPending = false;\n  for (const story of stories) {\n    let icon: string;\n    let colorFn: (s: string) => string;\n\n    if (story.passes) {\n      icon = icons.success;\n      colorFn = colored ? chalk.green : (s: string) => s;\n    } else if (!foundFirstPending) {\n      // First non-passing story = current in-progress\n      icon = icons.pending;\n      colorFn = colored ? chalk.yellow : (s: string) => s;\n      foundFirstPending = true;\n    } else {\n      // Not yet reached\n      icon = icons.notReached;\n      colorFn = colored ? chalk.gray : (s: string) => s;\n    }\n\n    lines.push(colorFn(`  ${icon} ${story.id}: ${story.title}`));\n  }\n\n  lines.push(`  ${printProgressBar(passed, total)}`);\n\n  if (cb) {\n    // Send as single output to listr2 task context\n    cb(lines.join('\\n'));\n  } else {\n    console.log('');\n    for (const line of lines) {\n      console.log(line);\n    }\n    console.log('');\n  }\n}\n","import chalk from 'chalk';\nimport type { EngineConfig, TaskPlan } from '../types.js';\nimport { formatDuration, getIcons, getTermWidth, useColor, useUnicode } from './logger.js';\n\n/**\n * Truncate or pad a string to fit within a given width.\n */\nfunction fitLine(text: string, width: number): string {\n  if (text.length > width) {\n    return text.substring(0, width);\n  }\n  return text.padEnd(width);\n}\n\n/**\n * Print a box with border characters around content lines.\n * Lines equal to \"---\" render as separator rows.\n */\nexport function printBox(lines: string[]): void {\n  const colored = useColor();\n  const unicode = useUnicode();\n  const termWidth = getTermWidth();\n\n  // Find max content width\n  let maxContentWidth = 0;\n  for (const line of lines) {\n    if (line !== '---' && line.length > maxContentWidth) {\n      maxContentWidth = line.length;\n    }\n  }\n\n  // Cap to terminal width (border + padding = 4 chars)\n  const available = termWidth - 4;\n  if (maxContentWidth > available) {\n    maxContentWidth = available;\n  }\n  if (maxContentWidth < 20) {\n    maxContentWidth = 20;\n  }\n\n  // Box drawing characters\n  const tl = unicode ? '\\u256D' : '+';\n  const tr = unicode ? '\\u256E' : '+';\n  const bl = unicode ? '\\u2570' : '+';\n  const br = unicode ? '\\u256F' : '+';\n  const h = unicode ? '\\u2500' : '-';\n  const v = unicode ? '\\u2502' : '|';\n  const sepL = unicode ? '\\u251C' : '+';\n  const sepR = unicode ? '\\u2524' : '+';\n\n  const hrule = h.repeat(maxContentWidth + 2);\n\n  const blue = colored ? chalk.blue : (s: string) => s;\n  const _reset = (s: string) => s;\n\n  // Top border\n  console.log(blue(`${tl}${hrule}${tr}`));\n\n  // Content lines\n  for (const line of lines) {\n    if (line === '---') {\n      console.log(blue(`${sepL}${hrule}${sepR}`));\n    } else {\n      const fitted = fitLine(line, maxContentWidth);\n      console.log(`${blue(v)} ${fitted} ${blue(v)}`);\n    }\n  }\n\n  // Bottom border\n  console.log(blue(`${bl}${hrule}${br}`));\n}\n\n/**\n * Print the startup header box showing engine configuration.\n */\nexport function printStartupHeader(config: EngineConfig, plan: TaskPlan): void {\n  const icons = getIcons();\n\n  const storiesTotal = plan.userStories.length;\n  const storiesPassing = plan.userStories.filter((s) => s.passes).length;\n  const branchName = plan.branchName ?? 'N/A';\n\n  const issueLabel = config.issueNumber ? `Issue #${config.issueNumber}` : 'Standalone mode';\n\n  const maxIterLabel =\n    config.maxIterations !== undefined ? String(config.maxIterations) : 'unlimited';\n\n  const retryLabel = config.retryForever\n    ? 'unlimited retries'\n    : `${config.retryLimit} consecutive retries`;\n\n  printBox([\n    `${icons.start} Issue Flow`,\n    '---',\n    `Issue:       ${issueLabel}`,\n    `Branch:      ${branchName}`,\n    `Stories:     ${storiesPassing}/${storiesTotal} passing`,\n    `Iterations:  ${maxIterLabel}`,\n    `Retries:     ${retryLabel}`,\n  ]);\n}\n\n// Re-export formatDuration from logger to maintain backwards compatibility\nexport { formatDuration } from './logger.js';\n\n/**\n * Print the final summary box.\n */\nexport function printSummaryBox(\n  status: 'success' | 'incomplete' | 'failed',\n  iterations: number,\n  totalRetries: number,\n  elapsedSeconds: number,\n  plan: TaskPlan,\n  extraInfo?: string,\n): void {\n  const icons = getIcons();\n\n  const storiesTotal = plan.userStories.length;\n  const storiesPassing = plan.userStories.filter((s) => s.passes).length;\n  const duration = formatDuration(elapsedSeconds);\n\n  let statusIcon: string;\n  let statusLabel: string;\n\n  switch (status) {\n    case 'success':\n      statusIcon = icons.success;\n      statusLabel = 'Completed';\n      break;\n    case 'incomplete':\n      statusIcon = icons.warn;\n      statusLabel = 'Incomplete';\n      break;\n    case 'failed':\n      statusIcon = icons.fail;\n      statusLabel = 'Failed';\n      break;\n  }\n\n  const boxLines = [\n    `${icons.end} Issue Flow Summary`,\n    '---',\n    `Status:      ${statusIcon} ${statusLabel}`,\n    `Stories:     ${storiesPassing}/${storiesTotal} passing`,\n    `Iterations:  ${iterations}`,\n    `Duration:    ${duration}`,\n    `Retries:     ${totalRetries}`,\n  ];\n\n  if (extraInfo) {\n    boxLines.push('---');\n    boxLines.push(extraInfo);\n  }\n\n  console.log('');\n  printBox(boxLines);\n}\n","/**\n * Transient failure patterns — matching the Bash script's detection heuristics.\n * These are checked case-insensitively against the combined output.\n */\nconst TRANSIENT_PATTERNS = [\n  'timed out',\n  'timeout',\n  'connection reset',\n  'connection refused',\n  'connection aborted',\n  'network error',\n  'network unavailable',\n  'temporary failure',\n  'temporarily unavailable',\n  'service unavailable',\n  'overloaded',\n  'rate limit',\n  'too many requests',\n  'bad gateway',\n  'gateway timeout',\n  'internal server error',\n  'http 429',\n  'http 500',\n  'http 502',\n  'http 503',\n  'http 504',\n  'econnreset',\n  'econnrefused',\n  'enotfound',\n  'etimedout',\n  'socket hang up',\n];\n\n/**\n * Determine if a Claude CLI failure is transient (retryable).\n *\n * A failure is considered transient if:\n * - Exit code is 75 (EX_TEMPFAIL)\n * - Output contains known transient error patterns\n */\nexport function isTransientFailure(exitCode: number, output: string): boolean {\n  // Exit code 75 = EX_TEMPFAIL\n  if (exitCode === 75) {\n    return true;\n  }\n\n  const lowered = output.toLowerCase();\n  return TRANSIENT_PATTERNS.some((pattern) => lowered.includes(pattern));\n}\n\n/**\n * Calculate retry delay using exponential backoff.\n *\n * delay = baseSeconds * 2^(attempt-1), capped at maxSeconds\n *\n * @param attempt - The retry attempt number (1-based)\n * @param baseSeconds - Base delay in seconds (default: 30)\n * @param maxSeconds - Maximum delay in seconds (default: 900)\n */\nexport function retryDelaySeconds(\n  attempt: number,\n  baseSeconds: number = 30,\n  maxSeconds: number = 900,\n): number {\n  const delay = baseSeconds * 2 ** (attempt - 1);\n  return Math.min(delay, maxSeconds);\n}\n","import { execa } from 'execa';\nimport type { ClaudeResult } from '../types.js';\nimport { getOutputCallback } from './verbose.js';\n\n/**\n * Execute Claude CLI with a prompt piped to stdin.\n *\n * Runs: echo $PROMPT | claude --dangerously-skip-permissions --print\n *\n * Captures combined stdout+stderr output. Does not throw on non-zero exit codes.\n * Output is returned via ClaudeResult and routed through the output callback infrastructure.\n */\nexport async function executeClaude(prompt: string): Promise<ClaudeResult> {\n  const result = await execa('claude', ['--dangerously-skip-permissions', '--print'], {\n    input: prompt,\n    reject: false,\n    timeout: 0, // No timeout — let the engine handle iteration limits\n    stripFinalNewline: false,\n  });\n\n  // Combine stdout and stderr to match Bash's 2>&1 behavior\n  const stdout = result.stdout?.toString() ?? '';\n  const stderr = result.stderr?.toString() ?? '';\n  const output = stdout + (stderr ? `\\n${stderr}` : '');\n\n  // Forward output through the global callback (listr2 renderer) when active\n  const onOutput = getOutputCallback();\n  if (onOutput) {\n    const trimmed = output.trim();\n    if (trimmed) {\n      onOutput(trimmed);\n    }\n  }\n\n  return {\n    exitCode: result.exitCode ?? 1,\n    output,\n  };\n}\n","import { createConfig, resolvePaths, validateDependencies } from '../config.js';\nimport { runEngine } from '../core/engine.js';\nimport { allStoriesPass, loadTaskPlan, saveTaskPlan } from '../core/state-manager.js';\nimport { printError } from '../ui/logger.js';\n\nexport interface ExecuteOptions {\n  issue?: string;\n  maxIterations?: number;\n  retryLimit?: number;\n  retryForever?: boolean;\n}\n\nexport async function runExecute(\n  positionalMaxIter: number | undefined,\n  options: ExecuteOptions,\n): Promise<number> {\n  const errors = await validateDependencies();\n  if (errors.length > 0) {\n    printError('The following required tools are not installed:');\n    for (const err of errors) {\n      console.log(err);\n    }\n    return 1;\n  }\n\n  const maxIterations = options.maxIterations ?? positionalMaxIter;\n\n  const config = createConfig({\n    issueNumber: options.issue,\n    maxIterations,\n    retryLimit: options.retryLimit,\n    retryForever: options.retryForever,\n  });\n\n  const paths = await resolvePaths(config);\n  const exitCode = await runEngine(config, paths);\n\n  // Update pipeline state if all stories pass\n  if (exitCode === 0 && config.issueNumber) {\n    try {\n      const plan = await loadTaskPlan(paths.prdFile);\n      if (allStoriesPass(plan)) {\n        plan.pipeline.executionCompleted = true;\n        await saveTaskPlan(paths.prdFile, plan);\n      }\n    } catch {\n      // Non-critical — engine already handled state\n    }\n  }\n\n  return 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package/dist/review-3QDZCOMT.js.map

@@ -1 +0,0 @@
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package/dist/run-PKHPULYL.js.map

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{\n          analyzeCompleted: false,\n          prdCompleted: false,\n          jsonCompleted: false,\n          executionCompleted: false,\n          reviewCompleted: false,\n          prCreated: false,\n        }),\n        [field]: true,\n      },\n    };\n\n    await saveTaskPlan(this.tasksJsonPath, this.plan);\n  }\n}\n","import { Listr, type ListrTask, PRESET_TIMER, PRESET_TIMESTAMP } from 'listr2';\nimport type { PipelinePhase } from '../core/pipeline.js';\nimport { loadTaskPlan } from '../core/state-manager.js';\nimport { setOutputCallback, setStoryUpdateCallback } from '../core/verbose.js';\nimport type { UserStory } from '../types.js';\n\n/** Minimal interface for the listr2 task wrapper properties we use. */\ninterface TaskContext {\n  title: string;\n  output: string;\n  newListr(tasks: ListrTask[], options?: Record<string, unknown>): Listr;\n}\n\n/**\n * Result returned after the pipeline renderer finishes.\n */\nexport interface PipelineResult {\n  success: boolean;\n  failedPhase?: string;\n  overallElapsedSeconds: number;\n}\n\n/**\n * Options for runPipelineWithRenderer.\n */\nexport interface PipelineRendererOptions {\n  /** All pipeline phases in order */\n  phases: PipelinePhase[];\n  /** Index of the first phase to run (phases before this are skipped) */\n  startIndex: number;\n  /** Whether verbose mode is enabled */\n  verbose: boolean;\n  /** Map of phase name to its async runner function */\n  runners: Record<string, () => Promise<void>>;\n  /** Path to tasks.json — enables execute-phase subtask progress when set */\n  tasksPath?: string;\n}\n\n/**\n * Phase labels for display.\n */\nconst PHASE_LABELS: Record<string, string> = {\n  analyze: 'Analyze',\n  prd: 'PRD',\n  plan: 'Plan',\n  execute: 'Execute',\n  review: 'Review',\n  pr: 'PR',\n};\n\n/**\n * Select the appropriate listr2 renderer based on environment.\n *\n * - TTY + not verbose -> 'default' (animated spinners)\n * - TTY + verbose -> 'verbose' (sequential lines)\n * - Non-TTY / CI -> 'simple' (plain timestamped output)\n *\n * NO_COLOR is handled by listr2's own color support and the useColor() utility,\n * not by switching renderers — a TTY with NO_COLOR still benefits from the\n * default renderer's layout and spinners.\n */\nfunction selectRenderer(verbose: boolean): 'default' | 'verbose' | 'simple' {\n  const isTTY = !!process.stdout.isTTY;\n  const isCI = !!process.env.CI;\n\n  if (!isTTY || isCI) {\n    return 'simple';\n  }\n\n  return verbose ? 'verbose' : 'default';\n}\n\n/**\n * Build the execute phase task with dynamic subtasks for each user story.\n *\n * Stories that already pass are displayed as skipped. Pending stories wait for\n * the engine to complete them via the story update callback. The parent task\n * title is updated with aggregate progress (e.g., \"Execute (3/5 stories passing)\").\n */\nfunction buildExecutePhaseTask(runner: () => Promise<void>, tasksPath: string, verbose: boolean) {\n  return async (_ctx: unknown, task: TaskContext) => {\n    let stories: UserStory[];\n    try {\n      const plan = await loadTaskPlan(tasksPath);\n      stories = [...plan.userStories].sort((a, b) => a.priority - b.priority);\n    } catch {\n      // If we can't read the plan, fall back to running without subtasks\n      setOutputCallback((line: string) => {\n        task.output = line;\n      });\n      try {\n        await runner();\n      } finally {\n        setOutputCallback(undefined);\n      }\n      return;\n    }\n\n    const totalStories = stories.length;\n    const initialPassed = stories.filter((s) => s.passes).length;\n    task.title = `Execute (${initialPassed}/${totalStories} stories passing)`;\n\n    // Create promise resolvers for pending stories\n    const resolvers = new Map<string, { resolve: () => void; reject: (err: Error) => void }>();\n\n    // Set up story update callback — engine calls this after each iteration\n    setStoryUpdateCallback((updatedStories: UserStory[]) => {\n      const passed = updatedStories.filter((s) => s.passes).length;\n      task.title = `Execute (${passed}/${totalStories} stories passing)`;\n\n      for (const s of updatedStories) {\n        if (s.passes && resolvers.has(s.id)) {\n          resolvers.get(s.id)!.resolve();\n          resolvers.delete(s.id);\n        }\n      }\n    });\n\n    // Build subtask definitions for each story\n    const subtaskDefs = stories.map((story) => ({\n      title: `${story.id}: ${story.title}`,\n      skip: story.passes ? 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Infinity : false,\n        persistentOutput: false,\n        bottomBar: verbose ? Infinity : 5,\n      },\n    };\n\n    // Run engine + story subtasks concurrently:\n    // - Engine subtask runs the actual execution loop\n    // - Story subtasks resolve as the engine completes each story\n    // Cleanup of setStoryUpdateCallback is handled in engineSubtask's finally block\n    return task.newListr([engineSubtask, ...subtaskDefs], {\n      concurrent: true,\n      exitOnError: false,\n      rendererOptions: {\n        timer: PRESET_TIMER,\n        collapseSkips: false,\n      },\n    });\n  };\n}\n\n/**\n * Run the pipeline phases through listr2 for single-writer terminal output.\n *\n * Phases before startIndex are displayed as \"skipped\".\n * Each running phase shows an animated spinner with elapsed time.\n * Completed phases show a checkmark with final duration.\n * The execute phase shows per-story subtask progress when tasksPath is provided.\n */\nexport async function runPipelineWithRenderer(\n  options: PipelineRendererOptions,\n): Promise<PipelineResult> {\n  const { phases, startIndex, verbose, runners, tasksPath } = options;\n  const overallStart = Date.now();\n  let currentPhase: string | undefined;\n  const renderer = selectRenderer(verbose);\n  const isSimple = renderer === 'simple';\n\n  const tasks = new Listr(\n    phases.map((phase, index) => {\n      const label = PHASE_LABELS[phase] ?? phase.charAt(0).toUpperCase() + phase.slice(1);\n      const isExecutePhase = phase === 'execute' && tasksPath;\n\n      return {\n        title: label,\n        skip: index < startIndex ? 'skipped' : false,\n        task: isExecutePhase\n          ? async (_ctx: unknown, task: TaskContext) => {\n              currentPhase = phase;\n              const runner = runners[phase];\n              if (!runner) {\n                throw new Error(`No runner defined for phase: ${phase}`);\n              }\n              return buildExecutePhaseTask(runner, tasksPath, verbose)(_ctx, task);\n            }\n          : async (_ctx: unknown, task: TaskContext) => {\n              currentPhase = phase;\n              const runner = runners[phase];\n              if (!runner) {\n                throw new Error(`No runner defined for phase: ${phase}`);\n              }\n              // Route all output through task.output so listr2 controls rendering\n              setOutputCallback((line: string) => {\n                task.output = line;\n              });\n              try {\n                await runner();\n              } finally {\n                setOutputCallback(undefined);\n              }\n            },\n        rendererOptions: {\n          timer: PRESET_TIMER,\n          outputBar: verbose ? 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