iosm-cli 0.2.17 → 0.3.1

package/dist/iosm/init.js.map

@@ -1 +1 @@
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{\n\texistsSync,\n\tmkdirSync,\n\treaddirSync,\n\treadFileSync,\n\tstatSync,\n\twriteFileSync,\n\ttype Dirent,\n} from \"node:fs\";\nimport { promises as fsPromises } from \"node:fs\";\nimport { basename, extname, join, relative, resolve } from \"node:path\";\nimport { stringify } from \"yaml\";\nimport type { IosmConfig } from \"./config.js\";\nimport { loadIosmConfig } from \"./config.js\";\nimport {\n\tcalculateDecisionConfidence,\n\tcalculateIosmIndex,\n\tcalculateIosmMetricsFromRawMeasurements,\n\tcreateMetricRecord,\n\thasCompleteNumericMetricRecord,\n\thasCompleteTierMetricRecord,\n\tIOSM_METRICS,\n} from \"./metrics.js\";\nimport {\n\tlistIosmCycles,\n\tplanIosmCycle,\n\trecordIosmCycleHistory,\n\ttype IosmCycleListItem,\n\ttype PlannedIosmCycle,\n} from \"./cycle.js\";\nimport { writeIosmGuideDocument } from \"./guide.js\";\nimport {\n\tgetIosmBaselineReportPath,\n\tgetIosmBaselinesDir,\n\tgetIosmConfigPath,\n\tgetIosmContractCatalogPath,\n\tgetIosmCycleDir,\n\tgetIosmCycleReportPath,\n\tgetIosmCyclesDir,\n\tgetIosmDecisionLogPath,\n\tgetIosmHypothesesPath,\n\tgetIosmInvariantCatalogPath,\n\tgetIosmMetricsHistoryPath,\n\tgetIosmPatternLibraryPath,\n\tgetIosmPhaseReportPath,\n\tgetIosmWaiverRegisterPath,\n\tgetIosmWorkspaceDir,\n} from \"./paths.js\";\nimport type {\n\tIosmBaselineReport,\n\tIosmCycleReport,\n\tIosmCycleScope,\n\tIosmEvidenceTier,\n\tIosmMetric,\n\tIosmMetricRecord,\n\tIosmPhase,\n} from \"./types.js\";\nimport { IOSM_PHASES } from \"./types.js\";\nconst MAX_ANALYZED_FILES = 6000;\nconst MAX_TEXT_FILE_BYTES = 1_000_000;\n\nconst IGNORED_DIRECTORIES = new Set([\n\t\".git\",\n\t\".hg\",\n\t\".svn\",\n\t\"node_modules\",\n\t\"dist\",\n\t\"build\",\n\t\"coverage\",\n\t\".next\",\n\t\".nuxt\",\n\t\".turbo\",\n\t\".cache\",\n\t\"target\",\n\t\"vendor\",\n\t\".idea\",\n\t\".vscode\",\n\t\".iosm\",\n]);\n\nconst SOURCE_EXTENSIONS = new Set([\n\t\".ts\",\n\t\".tsx\",\n\t\".js\",\n\t\".jsx\",\n\t\".mjs\",\n\t\".cjs\",\n\t\".py\",\n\t\".go\",\n\t\".rs\",\n\t\".java\",\n\t\".kt\",\n\t\".kts\",\n\t\".cs\",\n\t\".rb\",\n\t\".php\",\n\t\".swift\",\n\t\".c\",\n\t\".cc\",\n\t\".cpp\",\n\t\".h\",\n\t\".hpp\",\n\t\".sh\",\n\t\".sql\",\n]);\n\nconst TEXT_CONFIG_EXTENSIONS = new Set([\n\t\".json\",\n\t\".yaml\",\n\t\".yml\",\n\t\".toml\",\n\t\".md\",\n\t\".txt\",\n\t\".ini\",\n\t\".env\",\n\t\".xml\",\n]);\n\nconst KNOWN_TEXT_BASENAMES = new Set([\n\t\"Dockerfile\",\n\t\"Makefile\",\n\t\"README\",\n\t\"README.md\",\n\t\"README.txt\",\n\t\"LICENSE\",\n\t\".gitignore\",\n\t\"package.json\",\n\t\"pnpm-workspace.yaml\",\n\t\"bun.lockb\",\n\t\"Cargo.toml\",\n\t\"go.mod\",\n\t\"pyproject.toml\",\n\t\"requirements.txt\",\n\t\"composer.json\",\n\t\"Gemfile\",\n\t\"pom.xml\",\n]);\n\nconst EXTENSION_TO_LANGUAGE = new Map<string, string>([\n\t[\".ts\", \"TypeScript\"],\n\t[\".tsx\", \"TypeScript\"],\n\t[\".js\", \"JavaScript\"],\n\t[\".jsx\", \"JavaScript\"],\n\t[\".mjs\", \"JavaScript\"],\n\t[\".cjs\", \"JavaScript\"],\n\t[\".py\", \"Python\"],\n\t[\".go\", \"Go\"],\n\t[\".rs\", \"Rust\"],\n\t[\".java\", \"Java\"],\n\t[\".kt\", \"Kotlin\"],\n\t[\".kts\", \"Kotlin\"],\n\t[\".cs\", \"C#\"],\n\t[\".rb\", \"Ruby\"],\n\t[\".php\", \"PHP\"],\n\t[\".swift\", \"Swift\"],\n\t[\".c\", \"C/C++\"],\n\t[\".cc\", \"C/C++\"],\n\t[\".cpp\", \"C/C++\"],\n\t[\".h\", \"C/C++\"],\n\t[\".hpp\", \"C/C++\"],\n\t[\".sql\", \"SQL\"],\n\t[\".sh\", \"Shell\"],\n]);\n\nconst PRIMARY_SERVICE_DIRS = new Set([\"services\", \"apps\", \"api\", \"server\", \"backend\", \"workers\", \"worker\"]);\nconst DOMAIN_HINTS = [\"domain\", \"core\", \"billing\", \"payment\", \"checkout\", \"auth\", \"identity\", \"user\", \"order\"];\n\ntype UnknownRecord = Record<string, unknown>;\n\ninterface ProjectFileSample {\n\tpath: string;\n\tlines: number;\n\tbytes: number;\n\textension: string;\n\tbasename: string;\n}\n\ninterface LanguageStat {\n\tlanguage: string;\n\tfiles: number;\n\tlines: number;\n}\n\ninterface ContractSignal {\n\tkind: string;\n\tpath: string;\n\tdescription: string;\n}\n\ninterface ProjectSignals {\n\tfilesAnalyzed: number;\n\tsourceFileCount: number;\n\ttestFileCount: number;\n\tdocFileCount: number;\n\ttopLanguages: LanguageStat[];\n\tmodules: string[];\n\tservices: string[];\n\tdomains: string[];\n\tcontracts: ContractSignal[];\n\tsourceSystems: string[];\n\ttestRatio: number;\n\tdocsRatio: number;\n\tnamingConsistency: number;\n\tdependencyCount: number;\n\thasCiSignals: boolean;\n}\n\ninterface InitialCycleSummary {\n\tcycleId: string;\n\tcycleDir: string;\n\treportPath: string;\n\tbaselineReportPath: string;\n\thypothesesPath: string;\n\treusedExistingCycle: boolean;\n}\n\nexport interface IosmInitOptions {\n\tcwd?: string;\n\tforce?: boolean;\n}\n\nexport interface IosmInitAnalysis {\n\tgenerated_at: string;\n\tfiles_analyzed: number;\n\tsource_file_count: number;\n\ttest_file_count: number;\n\tdoc_file_count: number;\n\ttop_languages: LanguageStat[];\n\tcycle_scope: IosmCycleScope;\n\tdetected_contracts: ContractSignal[];\n\tsource_systems: string[];\n\tgoals: string[];\n\traw_measurements: Record<string, unknown>;\n\tmetrics: IosmMetricRecord<number | null>;\n\tmetric_confidences: IosmMetricRecord<number>;\n\tmetric_tiers: IosmMetricRecord<IosmEvidenceTier>;\n}\n\nexport interface IosmInitResult {\n\trootDir: string;\n\tcreated: string[];\n\toverwritten: string[];\n\tskipped: 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||\n\t\tnormalized.endsWith(\".test.jsx\") ||\n\t\tnormalized.endsWith(\".spec.ts\") ||\n\t\tnormalized.endsWith(\".spec.tsx\") ||\n\t\tnormalized.endsWith(\".spec.js\") ||\n\t\tnormalized.endsWith(\".spec.jsx\") ||\n\t\tnormalized.endsWith(\"_test.go\") ||\n\t\tnormalized.includes(\"/spec/\") ||\n\t\tnormalized.includes(\"/specs/\")\n\t);\n}\n\nfunction isDocPath(path: string): boolean {\n\tconst normalized = path.toLowerCase();\n\treturn (\n\t\tnormalized === \"readme.md\" ||\n\t\tnormalized.startsWith(\"docs/\") ||\n\t\tnormalized.endsWith(\".md\") ||\n\t\tnormalized.endsWith(\".mdx\")\n\t);\n}\n\nfunction isBinaryBuffer(buffer: Buffer): boolean {\n\tconst sampleLength = Math.min(buffer.length, 4096);\n\tfor (let index = 0; index < sampleLength; index++) {\n\t\tif (buffer[index] === 0) {\n\t\t\treturn true;\n\t\t}\n\t}\n\treturn false;\n}\n\nfunction shouldIgnoreDirectory(name: string): boolean {\n\tif (IGNORED_DIRECTORIES.has(name)) {\n\t\treturn true;\n\t}\n\tif (name.startsWith(\".\")) {\n\t\treturn name !== \".github\";\n\t}\n\treturn false;\n}\n\nfunction isPotentialTextFile(filePath: string, extension: string, basenameValue: string): boolean {\n\tif (SOURCE_EXTENSIONS.has(extension) || TEXT_CONFIG_EXTENSIONS.has(extension)) {\n\t\treturn true;\n\t}\n\tif (KNOWN_TEXT_BASENAMES.has(basenameValue)) {\n\t\treturn true;\n\t}\n\tconst lower = filePath.toLowerCase();\n\tif (lower.endsWith(\".proto\") || lower.endsWith(\".graphql\") || lower.endsWith(\".gql\")) {\n\t\treturn true;\n\t}\n\treturn false;\n}\n\nfunction collectProjectFiles(rootDir: string): ProjectFileSample[] {\n\tconst files: ProjectFileSample[] = [];\n\tconst queue: string[] = [rootDir];\n\n\twhile (queue.length > 0 && files.length < MAX_ANALYZED_FILES) {\n\t\tconst current = queue.shift();\n\t\tif (!current) {\n\t\t\tcontinue;\n\t\t}\n\n\t\tlet entries: Dirent[];\n\t\ttry {\n\t\t\tentries = readdirSync(current, { withFileTypes: true });\n\t\t} catch {\n\t\t\tcontinue;\n\t\t}\n\n\t\tfor (const entry of entries) {\n\t\t\tif (files.length >= MAX_ANALYZED_FILES) {\n\t\t\t\tbreak;\n\t\t\t}\n\n\t\t\tconst absolutePath = join(current, entry.name);\n\t\t\tconst relativePath = relative(rootDir, absolutePath).split(\"\\\\\").join(\"/\");\n\n\t\t\tif (entry.isDirectory()) {\n\t\t\t\tif (!shouldIgnoreDirectory(entry.name)) {\n\t\t\t\t\tqueue.push(absolutePath);\n\t\t\t\t}\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tif (!entry.isFile()) {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tconst extension = extname(entry.name).toLowerCase();\n\t\t\tif (!isPotentialTextFile(relativePath, extension, entry.name)) {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tlet bytes = 0;\n\t\t\ttry {\n\t\t\t\tbytes = statSync(absolutePath).size;\n\t\t\t} catch {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tif (bytes > MAX_TEXT_FILE_BYTES) {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tlet contentBuffer: Buffer;\n\t\t\ttry {\n\t\t\t\tcontentBuffer = readFileSync(absolutePath);\n\t\t\t} catch {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tif (isBinaryBuffer(contentBuffer)) {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tconst content = contentBuffer.toString(\"utf8\");\n\t\t\tconst lines = content.length === 0 ? 0 : content.split(/\\r?\\n/).length;\n\n\t\t\tfiles.push({\n\t\t\t\tpath: relativePath,\n\t\t\t\tlines,\n\t\t\t\tbytes,\n\t\t\t\textension,\n\t\t\t\tbasename: entry.name,\n\t\t\t});\n\t\t}\n\t}\n\n\treturn files;\n}\n\n// Concurrency-limited Promise.all using a simple semaphore\nasync function withConcurrencyLimit<T>(\n\titems: T[],\n\tlimit: number,\n\tfn: (item: T) => Promise<unknown>\n): Promise<void> {\n\tconst executing: Promise<unknown>[] = [];\n\tfor (const item of items) {\n\t\tconst p: Promise<unknown> = fn(item).then(() => executing.splice(executing.indexOf(p), 1));\n\t\texecuting.push(p);\n\t\tif (executing.length >= limit) await Promise.race(executing);\n\t}\n\tawait Promise.all(executing);\n}\n\nexport async function collectProjectFilesAsync(rootDir: string): Promise<ProjectFileSample[]> {\n\tconst files: ProjectFileSample[] = [];\n\tconst queue: string[] = [rootDir];\n\n\twhile (queue.length > 0 && files.length < MAX_ANALYZED_FILES) {\n\t\tconst currentBatch = queue.splice(0, queue.length);\n\t\tconst pendingFiles: Array<{ absolutePath: string; relativePath: string; extension: string; entryName: string }> = [];\n\n\t\tawait Promise.all(\n\t\t\tcurrentBatch.map(async (current) => {\n\t\t\t\tlet entries: Dirent[];\n\t\t\t\ttry {\n\t\t\t\t\tentries = await fsPromises.readdir(current, { withFileTypes: true });\n\t\t\t\t} catch {\n\t\t\t\t\treturn;\n\t\t\t\t}\n\n\t\t\t\tfor (const entry of entries) {\n\t\t\t\t\tif (files.length >= MAX_ANALYZED_FILES) {\n\t\t\t\t\t\tbreak;\n\t\t\t\t\t}\n\n\t\t\t\t\tconst absolutePath = join(current, entry.name);\n\t\t\t\t\tconst relativePath = relative(rootDir, absolutePath).split(\"\\\\\").join(\"/\");\n\n\t\t\t\t\tif (entry.isDirectory()) {\n\t\t\t\t\t\tif (!shouldIgnoreDirectory(entry.name)) {\n\t\t\t\t\t\t\tqueue.push(absolutePath);\n\t\t\t\t\t\t}\n\t\t\t\t\t\tcontinue;\n\t\t\t\t\t}\n\n\t\t\t\t\tif (!entry.isFile()) {\n\t\t\t\t\t\tcontinue;\n\t\t\t\t\t}\n\n\t\t\t\t\tconst extension = extname(entry.name).toLowerCase();\n\t\t\t\t\tif (!isPotentialTextFile(relativePath, extension, entry.name)) {\n\t\t\t\t\t\tcontinue;\n\t\t\t\t\t}\n\n\t\t\t\t\tpendingFiles.push({ absolutePath, relativePath, extension, entryName: entry.name });\n\t\t\t\t}\n\t\t\t}),\n\t\t);\n\n\t\tawait withConcurrencyLimit(pendingFiles, 10, async ({ absolutePath, relativePath, extension, entryName }) => {\n\t\t\tif (files.length >= MAX_ANALYZED_FILES) {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tlet bytes = 0;\n\t\t\ttry {\n\t\t\t\tbytes = (await fsPromises.stat(absolutePath)).size;\n\t\t\t} catch {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tif (bytes > MAX_TEXT_FILE_BYTES) {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tlet contentBuffer: Buffer;\n\t\t\ttry {\n\t\t\t\tcontentBuffer = Buffer.from(await fsPromises.readFile(absolutePath));\n\t\t\t} catch {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tif (isBinaryBuffer(contentBuffer)) {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tconst content = contentBuffer.toString(\"utf8\");\n\t\t\tconst lines = content.length === 0 ? 0 : content.split(/\\r?\\n/).length;\n\n\t\t\tif (files.length < MAX_ANALYZED_FILES) {\n\t\t\t\tfiles.push({\n\t\t\t\t\tpath: relativePath,\n\t\t\t\t\tlines,\n\t\t\t\t\tbytes,\n\t\t\t\t\textension,\n\t\t\t\t\tbasename: entryName,\n\t\t\t\t});\n\t\t\t}\n\t\t});\n\t}\n\n\treturn files;\n}\n\nfunction toMetricTier(confidence: number): IosmEvidenceTier {\n\tif (confidence >= 0.85) {\n\t\treturn \"A\";\n\t}\n\tif (confidence >= 0.65) {\n\t\treturn \"B\";\n\t}\n\treturn \"C\";\n}\n\nfunction detectContractSignals(files: ProjectFileSample[]): ContractSignal[] {\n\tconst contracts: ContractSignal[] = [];\n\tfor (const file of files) {\n\t\tconst normalized = file.path.toLowerCase();\n\t\tif (normalized.endsWith(\".proto\")) {\n\t\t\tcontracts.push({\n\t\t\t\tkind: \"protobuf\",\n\t\t\t\tpath: file.path,\n\t\t\t\tdescription: \"Protocol buffer service or schema\",\n\t\t\t});\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (normalized.endsWith(\".graphql\") || normalized.endsWith(\".gql\")) {\n\t\t\tcontracts.push({\n\t\t\t\tkind: \"graphql\",\n\t\t\t\tpath: file.path,\n\t\t\t\tdescription: \"GraphQL schema contract\",\n\t\t\t});\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (\n\t\t\t(normalized.includes(\"openapi\") || normalized.includes(\"swagger\")) &&\n\t\t\t(normalized.endsWith(\".yaml\") || normalized.endsWith(\".yml\") || normalized.endsWith(\".json\"))\n\t\t) {\n\t\t\tcontracts.push({\n\t\t\t\tkind: \"openapi\",\n\t\t\t\tpath: file.path,\n\t\t\t\tdescription: \"OpenAPI/Swagger API contract\",\n\t\t\t});\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (normalized.includes(\"/contracts/\") || normalized.includes(\"contract\")) {\n\t\t\tif (\n\t\t\t\tnormalized.endsWith(\".yaml\") ||\n\t\t\t\tnormalized.endsWith(\".yml\") ||\n\t\t\t\tnormalized.endsWith(\".json\") ||\n\t\t\t\tnormalized.endsWith(\".md\")\n\t\t\t) {\n\t\t\t\tcontracts.push({\n\t\t\t\t\tkind: \"custom\",\n\t\t\t\t\tpath: file.path,\n\t\t\t\t\tdescription: \"Repository contract declaration\",\n\t\t\t\t});\n\t\t\t}\n\t\t}\n\t}\n\n\tconst unique = new Map<string, ContractSignal>();\n\tfor (const contract of contracts) {\n\t\tconst key = `${contract.kind}:${contract.path}`;\n\t\tif (!unique.has(key)) {\n\t\t\tunique.set(key, contract);\n\t\t}\n\t}\n\n\treturn Array.from(unique.values()).slice(0, 20);\n}\n\nfunction detectTopModules(files: ProjectFileSample[]): {\n\tmodules: string[];\n\tservices: string[];\n\tdomains: string[];\n} {\n\tconst moduleWeights = new Map<string, number>();\n\tconst serviceWeights = new Map<string, number>();\n\tconst domainCandidates = new Set<string>();\n\n\tfor (const file of files) {\n\t\tif (!SOURCE_EXTENSIONS.has(file.extension) || isTestPath(file.path)) {\n\t\t\tcontinue;\n\t\t}\n\n\t\tconst segments = file.path.split(\"/\").filter((segment) => segment.length > 0);\n\t\tif (segments.length === 0) {\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (segments[0] === \"src\" && segments.length >= 2) {\n\t\t\tconst moduleName = segments[1];\n\t\t\tmoduleWeights.set(moduleName, (moduleWeights.get(moduleName) ?? 0) + file.lines + 1);\n\t\t\tif (DOMAIN_HINTS.some((hint) => moduleName.toLowerCase().includes(hint))) {\n\t\t\t\tdomainCandidates.add(moduleName);\n\t\t\t}\n\t\t}\n\n\t\tif (segments.length >= 2 && (segments[0] === \"packages\" || segments[0] === \"modules\")) {\n\t\t\tconst moduleName = `${segments[0]}/${segments[1]}`;\n\t\t\tmoduleWeights.set(moduleName, (moduleWeights.get(moduleName) ?? 0) + file.lines + 1);\n\t\t}\n\n\t\tif (PRIMARY_SERVICE_DIRS.has(segments[0])) {\n\t\t\tconst serviceName = segments[1] ? `${segments[0]}/${segments[1]}` : segments[0];\n\t\t\tserviceWeights.set(serviceName, (serviceWeights.get(serviceName) ?? 0) + file.lines + 1);\n\t\t\tif (segments[1] && DOMAIN_HINTS.some((hint) => segments[1].toLowerCase().includes(hint))) {\n\t\t\t\tdomainCandidates.add(segments[1]);\n\t\t\t}\n\t\t}\n\t}\n\n\tconst sortByWeight = (weights: Map<string, number>, limit: number): string[] =>\n\t\tArray.from(weights.entries())\n\t\t\t.sort((left, right) => right[1] - left[1])\n\t\t\t.map(([name]) => name)\n\t\t\t.slice(0, limit);\n\n\tconst modules = sortByWeight(moduleWeights, 12);\n\tconst services = sortByWeight(serviceWeights, 8);\n\tlet domains = Array.from(domainCandidates).slice(0, 8);\n\n\tif (domains.length === 0) {\n\t\tdomains = modules\n\t\t\t.map((moduleName) => moduleName.split(\"/\").pop() ?? moduleName)\n\t\t\t.filter((entry) => entry.length > 0)\n\t\t\t.slice(0, 6);\n\t}\n\n\treturn { modules, services, domains };\n}\n\nfunction detectDependencyCount(rootDir: string): number {\n\tconst packageJsonPath = join(rootDir, \"package.json\");\n\tif (!existsSync(packageJsonPath)) {\n\t\treturn 0;\n\t}\n\n\ttry {\n\t\tconst parsed = JSON.parse(readFileSync(packageJsonPath, \"utf8\")) as UnknownRecord;\n\t\tconst dependencies = parsed.dependencies;\n\t\tconst devDependencies = parsed.devDependencies;\n\t\tconst depCount = dependencies && typeof dependencies === \"object\" ? Object.keys(dependencies as UnknownRecord).length : 0;\n\t\tconst devDepCount =\n\t\t\tdevDependencies && typeof devDependencies === \"object\"\n\t\t\t\t? Object.keys(devDependencies as UnknownRecord).length\n\t\t\t\t: 0;\n\t\treturn depCount + devDepCount;\n\t} catch {\n\t\treturn 0;\n\t}\n}\n\nfunction detectSourceSystems(rootDir: string, files: ProjectFileSample[], topLanguages: LanguageStat[]): string[] {\n\tconst systems: string[] = [];\n\tconst lowerPaths = new Set(files.map((file) => file.path.toLowerCase()));\n\n\tif (lowerPaths.has(\"package.json\")) {\n\t\tsystems.push(\"npm\");\n\t}\n\tif (lowerPaths.has(\"pnpm-workspace.yaml\")) {\n\t\tsystems.push(\"pnpm-workspace\");\n\t}\n\tif (lowerPaths.has(\"go.mod\")) {\n\t\tsystems.push(\"go-mod\");\n\t}\n\tif (lowerPaths.has(\"cargo.toml\")) {\n\t\tsystems.push(\"cargo\");\n\t}\n\tif (lowerPaths.has(\"pyproject.toml\") || lowerPaths.has(\"requirements.txt\")) {\n\t\tsystems.push(\"python-packaging\");\n\t}\n\n\tif (existsSync(join(rootDir, \".github\", \"workflows\"))) {\n\t\tsystems.push(\"github-actions\");\n\t}\n\n\tfor (const language of topLanguages.slice(0, 3)) {\n\t\tsystems.push(`lang:${language.language}`);\n\t}\n\n\treturn Array.from(new Set(systems));\n}\n\nfunction computeNamingConsistency(files: ProjectFileSample[]): number {\n\tlet kebab = 0;\n\tlet snake = 0;\n\tlet camel = 0;\n\tlet other = 0;\n\n\tfor (const file of files) {\n\t\tif (!SOURCE_EXTENSIONS.has(file.extension) || isTestPath(file.path)) {\n\t\t\tcontinue;\n\t\t}\n\t\tconst baseWithoutExt = file.basename.replace(/\\.[^.]+$/, \"\");\n\t\tif (/^[a-z0-9]+(?:-[a-z0-9]+)+$/.test(baseWithoutExt)) {\n\t\t\tkebab += 1;\n\t\t} else if (/^[a-z0-9]+(?:_[a-z0-9]+)+$/.test(baseWithoutExt)) {\n\t\t\tsnake += 1;\n\t\t} else if (/^[a-z]+(?:[A-Z][a-z0-9]*)+$/.test(baseWithoutExt)) {\n\t\t\tcamel += 1;\n\t\t} else {\n\t\t\tother += 1;\n\t\t}\n\t}\n\n\tconst total = kebab + snake + camel + other;\n\tif (total === 0) {\n\t\treturn 0.65;\n\t}\n\n\tconst dominant = Math.max(kebab, snake, camel, 0);\n\tconst consistency = dominant / total;\n\treturn round3(clamp01(0.45 + consistency * 0.5));\n}\n\nasync function deriveProjectSignals(rootDir: string): Promise<ProjectSignals> {\n\tconst files = await collectProjectFilesAsync(rootDir);\n\n\tconst languageAccumulator = new Map<string, { files: number; lines: number }>();\n\tlet sourceFileCount = 0;\n\tlet testFileCount = 0;\n\tlet docFileCount = 0;\n\tlet hasCiSignals = false;\n\n\tfor (const file of files) {\n\t\tif (isDocPath(file.path)) {\n\t\t\tdocFileCount += 1;\n\t\t}\n\t\tif (file.path.toLowerCase().startsWith(\".github/workflows/\")) {\n\t\t\thasCiSignals = true;\n\t\t}\n\t\tif (!SOURCE_EXTENSIONS.has(file.extension)) {\n\t\t\tcontinue;\n\t\t}\n\n\t\tsourceFileCount += 1;\n\t\tif (isTestPath(file.path)) {\n\t\t\ttestFileCount += 1;\n\t\t}\n\n\t\tconst language = EXTENSION_TO_LANGUAGE.get(file.extension) ?? \"Other\";\n\t\tconst current = languageAccumulator.get(language) ?? { files: 0, lines: 0 };\n\t\tcurrent.files += 1;\n\t\tcurrent.lines += file.lines;\n\t\tlanguageAccumulator.set(language, current);\n\t}\n\n\tconst topLanguages = Array.from(languageAccumulator.entries())\n\t\t.sort((left, right) => right[1].lines - left[1].lines)\n\t\t.map(([language, stats]) => ({\n\t\t\tlanguage,\n\t\t\tfiles: stats.files,\n\t\t\tlines: stats.lines,\n\t\t}))\n\t\t.slice(0, 6);\n\n\tconst { modules, services, domains } = detectTopModules(files);\n\tconst contracts = detectContractSignals(files);\n\tconst dependencyCount = detectDependencyCount(rootDir);\n\tconst namingConsistency = computeNamingConsistency(files);\n\tconst testRatio = sourceFileCount === 0 ? 0 : clamp01(testFileCount / Math.max(sourceFileCount, 1));\n\tconst docsRatio = files.length === 0 ? 0 : clamp01(docFileCount / Math.max(files.length, 1));\n\tconst sourceSystems = detectSourceSystems(rootDir, files, topLanguages);\n\n\treturn {\n\t\tfilesAnalyzed: files.length,\n\t\tsourceFileCount,\n\t\ttestFileCount,\n\t\tdocFileCount,\n\t\ttopLanguages,\n\t\tmodules,\n\t\tservices,\n\t\tdomains,\n\t\tcontracts,\n\t\tsourceSystems,\n\t\ttestRatio,\n\t\tdocsRatio,\n\t\tnamingConsistency,\n\t\tdependencyCount,\n\t\thasCiSignals,\n\t};\n}\n\nfunction buildCycleScope(signals: ProjectSignals, maxScopeItems: number): IosmCycleScope {\n\tconst scoped: IosmCycleScope = {\n\t\tmodules: [],\n\t\tservices: [],\n\t\tdomains: [],\n\t\tcontracts: [],\n\t\trationale: \"Auto-filled from repository structure during iosm init.\",\n\t};\n\n\tlet total = 0;\n\tconst append = (key: \"modules\" | \"services\" | \"domains\" | \"contracts\", values: string[]) => {\n\t\tfor (const value of values) {\n\t\t\tif (total >= maxScopeItems) {\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (!scoped[key].includes(value)) {\n\t\t\t\tscoped[key].push(value);\n\t\t\t\ttotal += 1;\n\t\t\t}\n\t\t}\n\t};\n\n\tappend(\"modules\", signals.modules.slice(0, 8));\n\tappend(\"services\", signals.services.slice(0, 6));\n\tappend(\n\t\t\"domains\",\n\t\tsignals.domains\n\t\t\t.map((domain) => domain.split(\"/\").pop() ?? domain)\n\t\t\t.filter((domain) => domain.length > 0)\n\t\t\t.slice(0, 6),\n\t);\n\tappend(\n\t\t\"contracts\",\n\t\tsignals.contracts\n\t\t\t.map((contract) => contract.path)\n\t\t\t.slice(0, 4),\n\t);\n\n\tif (total === 0) {\n\t\tscoped.modules = [\"repository\"];\n\t\ttotal = 1;\n\t}\n\n\tconst sourceLines = [`scope_items=${total}`, `max_scope_items=${maxScopeItems}`];\n\tif (signals.modules.length > scoped.modules.length) {\n\t\tsourceLines.push(`modules_truncated=${signals.modules.length - scoped.modules.length}`);\n\t}\n\tif (signals.services.length > scoped.services.length) {\n\t\tsourceLines.push(`services_truncated=${signals.services.length - scoped.services.length}`);\n\t}\n\tscoped.rationale = `Auto-filled from repository structure (${sourceLines.join(\", \")}).`;\n\n\treturn scoped;\n}\n\nfunction buildRawMeasurements(signals: ProjectSignals): Record<string, unknown> {\n\tconst moduleCount = Math.max(signals.modules.length, 1);\n\tconst contractCount = signals.contracts.length;\n\tconst docsSignal = clamp01(0.25 + signals.docsRatio * 2.2 + (signals.docFileCount > 0 ? 0.1 : 0));\n\tconst ciBoost = signals.hasCiSignals ? 0.12 : 0;\n\n\tconst semanticGlossaryCoverage = round3(clamp01(0.45 + docsSignal * 0.45));\n\tconst semanticNamingConsistency = round3(clamp01(signals.namingConsistency));\n\tconst semanticAmbiguityRatio = round3(clamp01(0.35 - docsSignal * 0.2));\n\n\tconst logicInvariantPassRate = round3(clamp01(0.52 + signals.testRatio * 0.4 + ciBoost * 0.3));\n\tconst inferredInvariantCount = Math.max(3, Math.min(10, moduleCount + (contractCount > 0 ? 1 : 0)));\n\n\tconst performanceLatencyScore = round3(clamp01(0.48 + signals.testRatio * 0.22 + ciBoost));\n\tconst performanceReliabilityScore = round3(clamp01(0.58 + signals.testRatio * 0.2 + ciBoost));\n\tconst performanceResilienceScore = round3(clamp01(0.5 + (contractCount > 0 ? 0.08 : 0) + signals.testRatio * 0.18));\n\n\tconst simplicityApiSurfaceScore = round3(clamp01(1 - Math.min(0.65, moduleCount / 22)));\n\tconst simplicityDependencyHygiene = round3(clamp01(1 - Math.min(0.7, signals.dependencyCount / 140)));\n\tconst simplicityOnboardingScore = round3(clamp01(0.48 + docsSignal * 0.45));\n\n\tconst modularityCouplingScore = round3(clamp01(1 - Math.min(0.72, moduleCount / 20)));\n\tconst modularityCohesionScore = round3(clamp01(0.46 + Math.min(0.24, 1 / moduleCount) + (contractCount > 0 ? 0.12 : 0)));\n\tconst modularityContractScore = round3(contractCount > 0 ? 1 : 0.58);\n\tconst modularityChangeSurfaceScore = round3(clamp01(1 - Math.min(0.82, moduleCount / 18)));\n\tconst modularityChangeSurface = Math.max(1, Math.min(12, moduleCount));\n\n\tconst flowLeadTimeScore = round3(clamp01(0.45 + signals.testRatio * 0.2 + ciBoost));\n\tconst flowDeployFrequencyScore = round3(clamp01(0.4 + ciBoost + signals.docsRatio * 0.08));\n\tconst flowChangeFailureScore = round3(clamp01(0.62 + signals.testRatio * 0.25));\n\tconst flowReviewLatencyScore = round3(clamp01(0.5 + ciBoost + signals.docsRatio * 0.1));\n\n\treturn {\n\t\tsemantic: {\n\t\t\tglossary_coverage: semanticGlossaryCoverage,\n\t\t\tnaming_consistency: semanticNamingConsistency,\n\t\t\tambiguity_ratio: semanticAmbiguityRatio,\n\t\t},\n\t\tlogic: {\n\t\t\tinvariant_pass_rate: logicInvariantPassRate,\n\t\t\tpassed_invariants: Math.round(inferredInvariantCount * logicInvariantPassRate),\n\t\t\ttotal_invariants: inferredInvariantCount,\n\t\t},\n\t\tperformance: {\n\t\t\tlatency_score: performanceLatencyScore,\n\t\t\treliability_score: performanceReliabilityScore,\n\t\t\tresilience_score: performanceResilienceScore,\n\t\t\terror_budget_respected: performanceReliabilityScore >= 0.7,\n\t\t},\n\t\tsimplicity: {\n\t\t\tapi_surface_score: simplicityApiSurfaceScore,\n\t\t\tdependency_hygiene: simplicityDependencyHygiene,\n\t\t\tonboarding_score: simplicityOnboardingScore,\n\t\t},\n\t\tmodularity: {\n\t\t\tcoupling_score: modularityCouplingScore,\n\t\t\tcohesion_score: modularityCohesionScore,\n\t\t\tcontract_score: modularityContractScore,\n\t\t\tchange_surface_score: modularityChangeSurfaceScore,\n\t\t\tchange_surface: modularityChangeSurface,\n\t\t\tcontracts_pass: modularityContractScore >= 0.8,\n\t\t},\n\t\tflow: {\n\t\t\tlead_time_score: flowLeadTimeScore,\n\t\t\tdeploy_frequency_score: flowDeployFrequencyScore,\n\t\t\tchange_failure_score: flowChangeFailureScore,\n\t\t\treview_latency_score: flowReviewLatencyScore,\n\t\t},\n\t};\n}\n\nfunction buildMetricConfidences(signals: ProjectSignals): IosmMetricRecord<number> {\n\tconst docsConfidence = clamp01(0.52 + signals.docsRatio * 0.35);\n\tconst testConfidence = clamp01(0.5 + signals.testRatio * 0.4 + (signals.hasCiSignals ? 0.08 : 0));\n\tconst dependencyConfidence = clamp01(0.55 + (signals.dependencyCount > 0 ? 0.12 : 0));\n\n\treturn {\n\t\tsemantic: round3(clamp01(docsConfidence)),\n\t\tlogic: round3(clamp01(testConfidence)),\n\t\tperformance: round3(clamp01(0.52 + signals.testRatio * 0.22 + (signals.hasCiSignals ? 0.1 : 0))),\n\t\tsimplicity: round3(clamp01(Math.max(docsConfidence, dependencyConfidence - 0.05))),\n\t\tmodularity: round3(clamp01(0.56 + (signals.modules.length > 0 ? 0.08 : 0) + (signals.contracts.length > 0 ? 0.08 : 0))),\n\t\tflow: round3(clamp01(0.48 + (signals.hasCiSignals ? 0.14 : 0))),\n\t};\n}\n\nfunction goalForMetric(metric: IosmMetric): string {\n\tswitch (metric) {\n\t\tcase \"semantic\":\n\t\t\treturn \"Increase glossary coverage and naming consistency for core domain language.\";\n\t\tcase \"logic\":\n\t\t\treturn \"Increase invariant/test confidence for critical logic paths and edge cases.\";\n\t\tcase \"performance\":\n\t\t\treturn \"Improve latency and reliability signals for primary user journeys.\";\n\t\tcase \"simplicity\":\n\t\t\treturn \"Reduce onboarding friction by shrinking API/dependency surface complexity.\";\n\t\tcase \"modularity\":\n\t\t\treturn \"Reduce coupling and change surface while strengthening contract boundaries.\";\n\t\tcase \"flow\":\n\t\t\treturn \"Improve lead-time and review-latency flow signals for safer delivery cadence.\";\n\t}\n}\n\nfunction buildGoals(metrics: IosmMetricRecord<number | null>): string[] {\n\tconst ordered = IOSM_METRICS.map((metric) => ({ metric, value: metrics[metric] ?? 0 }))\n\t\t.sort((left, right) => left.value - right.value)\n\t\t.slice(0, 3)\n\t\t.map((entry) => goalForMetric(entry.metric));\n\n\tif (ordered.length === 0) {\n\t\treturn [\"Establish IOSM baseline metrics and define an initial cycle scope.\"];\n\t}\n\n\tconst unique = Array.from(new Set(ordered));\n\tif (unique.length === 1) {\n\t\tunique.push(\"Establish IOSM baseline metrics and define an initial cycle scope.\");\n\t}\n\treturn unique.slice(0, 3);\n}\n\nfunction createIosmConfigTemplate(systemName: string): string {\n\tconst encodedSystemName = JSON.stringify(systemName);\n\n\treturn `iosm:\n  metadata:\n    system_name: ${encodedSystemName}\n    scope: repository\n    criticality_profile: standard\n    delivery_boundary: ${encodedSystemName}\n  planning:\n    use_economic_decision: true\n    prioritization_formula: wsjf_confidence\n    min_confidence: 0.70\n    hypothesis_required: true\n    cycle_scope_required: true\n  cycle_capacity:\n    max_goals: 3\n    max_scope_items: 5\n    max_expected_change_surface: 3\n  cycle_policy:\n    max_iterations_per_phase: 3\n    stabilization:\n      target_index: 0.98\n      consecutive_cycles: 3\n      global_metric_floor: 0.60\n      max_consecutive_unexplained_declines: 2\n      metric_floors:\n        logic: 0.95\n        performance: 0.85\n  quality_gates:\n    gate_I:\n      semantic_min: 0.95\n      logical_consistency_min: 1.00\n      duplication_max: 0.05\n    gate_O:\n      latency_ms:\n        p50_max: 60\n        p95_max: 150\n        p99_max: 250\n      error_budget_respected: true\n      chaos_pass_rate_min: 1.00\n    gate_S:\n      at_least_one_dimension: true\n      api_surface_reduction_min: 0.20\n      dependency_hygiene_min: 0.95\n      onboarding_time_minutes_max: 15\n      regression_budget_max: 0\n    gate_M:\n      change_surface_max: 3\n      coupling_max: 0.20\n      cohesion_min: 0.80\n      contracts_pass: true\n  guardrails:\n    max_negative_delta:\n      semantic: 0.02\n      logic: 0.00\n      performance: 0.03\n      simplicity: 0.03\n      modularity: 0.02\n      flow: 0.02\n  evidence:\n    min_decision_confidence: 0.80\n    freshness_sla_hours:\n      tier_a: 24\n      tier_b: 168\n    min_metric_confidence:\n      semantic: 0.70\n      logic: 0.90\n      performance: 0.90\n      simplicity: 0.70\n      modularity: 0.70\n      flow: 0.80\n  waivers:\n    max_duration_days: 14\n    require_human_approval: true\n  metric_targets:\n    semantic:\n      glossary_coverage_min: 0.95\n      naming_consistency_min: 0.95\n      ambiguity_ratio_max: 0.05\n    logic:\n      invariant_pass_rate_min: 1.00\n    performance:\n      latency_ms:\n        p50_max: 60\n        p95_max: 150\n        p99_max: 250\n    simplicity:\n      onboarding_time_minutes_max: 15\n    modularity:\n      change_surface_max: 3\n    flow:\n      lead_time_hours_max: 24\n      deploy_frequency_per_week_min: 5\n      change_failure_rate_max: 0.15\n      review_latency_hours_max: 24\n  index:\n    weights:\n      semantic: 0.15\n      logic: 0.20\n      performance: 0.25\n      simplicity: 0.15\n      modularity: 0.15\n      flow: 0.10\n  automation:\n    allow_agents: true\n    human_approval_required_for:\n      - waivers\n      - public_contract_changes\n      - threshold_relaxation\n      - destructive_data_changes\n  reporting:\n    persist_history: true\n    output_format: json\n  learning:\n    update_pattern_library: true\n    update_decision_log: true\n    update_glossary: true\n`;\n}\n\nfunction writeScaffoldFileWithExistenceCheck(\n\tfilePath: string,\n\tcontent: string,\n\tforce: boolean,\n\tresult: IosmInitResult,\n): void {\n\tconst existed = existsSync(filePath);\n\tif (existed && !force) {\n\t\tpushUnique(result.skipped, filePath);\n\t\treturn;\n\t}\n\n\twriteFileSync(filePath, content, \"utf8\");\n\tmarkPathByExistence(filePath, existed, result);\n}\n\nfunction writeJson(filePath: string, value: unknown): void {\n\twriteFileSync(filePath, `${JSON.stringify(value, null, 2)}\\n`, \"utf8\");\n}\n\nfunction readJson<T>(filePath: string): T {\n\treturn JSON.parse(readFileSync(filePath, \"utf8\")) as T;\n}\n\nfunction countScopeItems(scope: IosmCycleScope): number {\n\treturn scope.modules.length + scope.services.length + scope.domains.length + scope.contracts.length;\n}\n\nfunction createInvariantsCatalog(signals: ProjectSignals, nowIso: string): UnknownRecord {\n\tconst invariants: UnknownRecord[] = [\n\t\t{\n\t\t\tid: \"inv-build-green\",\n\t\t\tstatement: \"Build/test pipeline remains green for cycle scope changes.\",\n\t\t\tstatus: \"active\",\n\t\t\tevidence_tier: signals.hasCiSignals ? \"B\" : \"C\",\n\t\t\towner: \"unassigned\",\n\t\t},\n\t\t{\n\t\t\tid: \"inv-contract-compatibility\",\n\t\t\tstatement: \"Public contracts are backward compatible unless an approved waiver exists.\",\n\t\t\tstatus: \"active\",\n\t\t\tevidence_tier: signals.contracts.length > 0 ? \"B\" : \"C\",\n\t\t\towner: \"unassigned\",\n\t\t},\n\t\t{\n\t\t\tid: \"inv-metric-freshness\",\n\t\t\tstatement: \"IOSM baseline and cycle metrics must be refreshed each cycle before decisioning.\",\n\t\t\tstatus: \"active\",\n\t\t\tevidence_tier: \"C\",\n\t\t\towner: \"unassigned\",\n\t\t},\n\t];\n\n\treturn {\n\t\tversion: 1,\n\t\tgenerated_at: nowIso,\n\t\tinvariants,\n\t};\n}\n\nfunction createContractCatalog(signals: ProjectSignals, nowIso: string): UnknownRecord {\n\treturn {\n\t\tversion: 1,\n\t\tgenerated_at: nowIso,\n\t\tcontracts: signals.contracts.map((contract, index) => ({\n\t\t\tid: `contract-${String(index + 1).padStart(3, \"0\")}`,\n\t\t\tkind: contract.kind,\n\t\t\tpath: contract.path,\n\t\t\tdescription: contract.description,\n\t\t\tstatus: \"tracked\",\n\t\t\towner: \"unassigned\",\n\t\t})),\n\t};\n}\n\nfunction createWaiverRegister(nowIso: string): UnknownRecord {\n\treturn {\n\t\tversion: 1,\n\t\tgenerated_at: nowIso,\n\t\twaivers: [],\n\t};\n}\n\nfunction formatMetricInline(metric: IosmMetric, value: number | null): string {\n\treturn `${metric}=${value === null ? \"n/a\" : value.toFixed(3)}`;\n}\n\nfunction createDecisionLog(systemName: string, analysis: IosmInitAnalysis): string {\n\tconst metricLine = IOSM_METRICS.map((metric) => formatMetricInline(metric, analysis.metrics[metric])).join(\", \");\n\tconst confidenceLine = IOSM_METRICS.map((metric) => `${metric}=${analysis.metric_confidences[metric].toFixed(2)}`).join(\", \");\n\tconst goals = analysis.goals.map((goal) => `- ${goal}`).join(\"\\n\");\n\tconst contractsLine =\n\t\tanalysis.detected_contracts.length > 0\n\t\t\t? analysis.detected_contracts.map((contract) => `${contract.kind}:${contract.path}`).join(\", \")\n\t\t\t: \"none\";\n\tconst topLanguagesLine =\n\t\tanalysis.top_languages.length > 0\n\t\t\t? analysis.top_languages\n\t\t\t\t\t.map((language) => `${language.language}(${language.files} files)`)\n\t\t\t\t\t.join(\", \")\n\t\t\t: \"unknown\";\n\n\treturn [\n\t\t\"# IOSM Decision Log\",\n\t\t\"\",\n\t\t`## Initialization Snapshot (${analysis.generated_at})`,\n\t\t`- System: ${systemName}`,\n\t\t`- Files analyzed: ${analysis.files_analyzed}`,\n\t\t`- Source files: ${analysis.source_file_count}`,\n\t\t`- Test files: ${analysis.test_file_count}`,\n\t\t`- Docs files: ${analysis.doc_file_count}`,\n\t\t`- Top languages: ${topLanguagesLine}`,\n\t\t`- Contracts detected: ${contractsLine}`,\n\t\t`- Baseline metrics: ${metricLine}`,\n\t\t`- Metric confidence: ${confidenceLine}`,\n\t\t\"\",\n\t\t\"## Initial Decision\",\n\t\t\"- Decision: CONTINUE\",\n\t\t\"- Rationale: Project baseline captured; continue through IOSM phases with evidence upgrades.\",\n\t\t\"\",\n\t\t\"## Initial Goals\",\n\t\tgoals,\n\t\t\"\",\n\t].join(\"\\n\");\n}\n\nfunction createPatternLibrary(analysis: IosmInitAnalysis): string {\n\tconst modulesLine = analysis.cycle_scope.modules.length > 0 ? analysis.cycle_scope.modules.join(\", \") : \"none\";\n\tconst servicesLine = analysis.cycle_scope.services.length > 0 ? analysis.cycle_scope.services.join(\", \") : \"none\";\n\tconst domainsLine = analysis.cycle_scope.domains.length > 0 ? analysis.cycle_scope.domains.join(\", \") : \"none\";\n\tconst contractsLine =\n\t\tanalysis.detected_contracts.length > 0\n\t\t\t? analysis.detected_contracts.map((contract) => contract.path).join(\", \")\n\t\t\t: \"none\";\n\n\treturn [\n\t\t\"# IOSM Pattern Library\",\n\t\t\"\",\n\t\t`## Baseline Patterns (${analysis.generated_at})`,\n\t\t`- Scoped modules: ${modulesLine}`,\n\t\t`- Scoped services: ${servicesLine}`,\n\t\t`- Scoped domains: ${domainsLine}`,\n\t\t`- Contracts: ${contractsLine}`,\n\t\t\"\",\n\t\t\"## Notes\",\n\t\t\"- Entries above are auto-detected during `iosm init` and should be refined during Improve/Shrink phases.\",\n\t\t\"- Capture validated reusable tactics here after cycle completion.\",\n\t\t\"\",\n\t].join(\"\\n\");\n}\n\nfunction deriveInitAnalysis(signals: ProjectSignals, config: IosmConfig): IosmInitAnalysis {\n\tconst nowIso = new Date().toISOString();\n\tconst maxScopeItems = Math.max(\n\t\t1,\n\t\tMath.min(\n\t\t\tconfig.iosm.cycle_capacity.max_scope_items,\n\t\t\tconfig.iosm.cycle_capacity.max_expected_change_surface,\n\t\t),\n\t);\n\tconst cycleScope = buildCycleScope(signals, maxScopeItems);\n\tconst rawMeasurements = buildRawMeasurements(signals);\n\tconst metrics = calculateIosmMetricsFromRawMeasurements(rawMeasurements, config);\n\tconst metricConfidences = buildMetricConfidences(signals);\n\tconst metricTiers = createMetricRecord((metric) => toMetricTier(metricConfidences[metric]));\n\tconst goals = buildGoals(metrics);\n\n\treturn {\n\t\tgenerated_at: nowIso,\n\t\tfiles_analyzed: signals.filesAnalyzed,\n\t\tsource_file_count: signals.sourceFileCount,\n\t\ttest_file_count: signals.testFileCount,\n\t\tdoc_file_count: signals.docFileCount,\n\t\ttop_languages: signals.topLanguages,\n\t\tcycle_scope: cycleScope,\n\t\tdetected_contracts: signals.contracts,\n\t\tsource_systems: signals.sourceSystems,\n\t\tgoals,\n\t\traw_measurements: rawMeasurements,\n\t\tmetrics,\n\t\tmetric_confidences: metricConfidences,\n\t\tmetric_tiers: metricTiers,\n\t};\n}\n\nfunction seedCycleArtifactsFromAnalysis(\n\trootDir: string,\n\tcycleId: string,\n\tanalysis: IosmInitAnalysis,\n\tconfig: IosmConfig,\n): void {\n\tconst baselinePath = getIosmBaselineReportPath(cycleId, rootDir);\n\tconst reportPath = getIosmCycleReportPath(cycleId, rootDir);\n\tconst hypothesesPath = getIosmHypothesesPath(cycleId, rootDir);\n\n\tif (!existsSync(baselinePath) || !existsSync(reportPath) || !existsSync(hypothesesPath)) {\n\t\treturn;\n\t}\n\n\tconst baseline = readJson<IosmBaselineReport>(baselinePath);\n\tbaseline.cycle_scope = analysis.cycle_scope;\n\tbaseline.source_systems = analysis.source_systems.length > 0 ? analysis.source_systems : baseline.source_systems;\n\tbaseline.baseline_metrics = {\n\t\tvalues: analysis.metrics,\n\t\traw_measurements: analysis.raw_measurements,\n\t};\n\tbaseline.captured_at = analysis.generated_at;\n\twriteJson(baselinePath, baseline);\n\n\tconst report = readJson<IosmCycleReport>(reportPath);\n\treport.status = \"active\";\n\treport.cycle_scope = analysis.cycle_scope;\n\treport.raw_measurements = analysis.raw_measurements;\n\treport.metrics = analysis.metrics;\n\treport.metric_confidences = analysis.metric_confidences;\n\treport.metric_tiers = analysis.metric_tiers;\n\treport.metric_deltas = createMetricRecord(() => 0);\n\treport.decline_coverage = createMetricRecord(() => true);\n\treport.iosm_index = calculateIosmIndex(analysis.metrics, config.iosm.index.weights);\n\treport.decision_confidence = calculateDecisionConfidence(analysis.metric_confidences, config.iosm.index.weights);\n\treport.incomplete =\n\t\t!hasCompleteNumericMetricRecord(report.metrics) ||\n\t\t!hasCompleteNumericMetricRecord(report.metric_confidences) ||\n\t\t!hasCompleteTierMetricRecord(report.metric_tiers) ||\n\t\treport.window.length === 0;\n\treport.decision = \"CONTINUE\";\n\treport.automation_actors = [\n\t\t...(report.automation_actors ?? []),\n\t\t{\n\t\t\ttype: \"agent\",\n\t\t\trole: \"analyzer\",\n\t\t\tidentity: \"iosm-init\",\n\t\t\tprovenance: \"repo-static-analysis\",\n\t\t},\n\t];\n\tconst scopeItems = countScopeItems(analysis.cycle_scope);\n\treport.cycle_capacity = {\n\t\tgoal_count: report.goals.length,\n\t\tscope_size: scopeItems,\n\t\texpected_change_surface: scopeItems > 0 ? scopeItems : Math.max(report.hypotheses.length, 1),\n\t\tpass:\n\t\t\treport.goals.length <= config.iosm.cycle_capacity.max_goals &&\n\t\t\tscopeItems <= config.iosm.cycle_capacity.max_scope_items &&\n\t\t\t(scopeItems > 0 ? scopeItems : Math.max(report.hypotheses.length, 1)) <=\n\t\t\t\tconfig.iosm.cycle_capacity.max_expected_change_surface,\n\t};\n\twriteJson(reportPath, report);\n}\n\nfunction getCycleArtifactPaths(rootDir: string, cycleId: string): string[] {\n\treturn [\n\t\tgetIosmBaselineReportPath(cycleId, rootDir),\n\t\tgetIosmHypothesesPath(cycleId, rootDir),\n\t\tgetIosmCycleReportPath(cycleId, rootDir),\n\t\t...IOSM_PHASES.map((phase) => getIosmPhaseReportPath(cycleId, phase, rootDir)),\n\t];\n}\n\nfunction shouldReuseCycleForInit(cycle: IosmCycleListItem | undefined): boolean {\n\tif (!cycle) {\n\t\treturn false;\n\t}\n\n\treturn cycle.decision === \"CONTINUE\" || cycle.decision === \"unknown\";\n}\n\nfunction planOrReuseCycle(\n\trootDir: string,\n\tforce: boolean,\n\tanalysis: IosmInitAnalysis,\n\tconfig: IosmConfig,\n\tresult: IosmInitResult,\n): InitialCycleSummary | undefined {\n\tlet existingCycles: IosmCycleListItem[] = [];\n\ttry {\n\t\texistingCycles = listIosmCycles(rootDir);\n\t} catch {\n\t\texistingCycles = [];\n\t}\n\n\tconst latestCycle = existingCycles[0];\n\tconst shouldReuse = shouldReuseCycleForInit(latestCycle);\n\tlet planned: PlannedIosmCycle | undefined;\n\tlet reusedExistingCycle = false;\n\tconst existedBeforePlan = new Map<string, boolean>();\n\n\tif (!shouldReuse) {\n\t\tplanned = planIosmCycle({\n\t\t\tcwd: rootDir,\n\t\t\tgoals: analysis.goals,\n\t\t\tforce,\n\t\t});\n\t} else if (force) {\n\t\treusedExistingCycle = true;\n\t\tconst cycleId = latestCycle.cycleId;\n\t\tfor (const artifactPath of getCycleArtifactPaths(rootDir, cycleId)) {\n\t\t\texistedBeforePlan.set(artifactPath, existsSync(artifactPath));\n\t\t}\n\t\tplanned = planIosmCycle({\n\t\t\tcwd: rootDir,\n\t\t\tcycleId,\n\t\t\tgoals: analysis.goals,\n\t\t\tforce: true,\n\t\t});\n\t} else {\n\t\tconst cycleId = latestCycle.cycleId;\n\t\treturn {\n\t\t\tcycleId,\n\t\t\tcycleDir: getIosmCycleDir(cycleId, rootDir),\n\t\t\treportPath: getIosmCycleReportPath(cycleId, rootDir),\n\t\t\tbaselineReportPath: getIosmBaselineReportPath(cycleId, rootDir),\n\t\t\thypothesesPath: getIosmHypothesesPath(cycleId, rootDir),\n\t\t\treusedExistingCycle: true,\n\t\t};\n\t}\n\n\tif (!planned) {\n\t\treturn undefined;\n\t}\n\n\tconst artifactPaths = getCycleArtifactPaths(rootDir, planned.cycleId);\n\tfor (const filePath of artifactPaths) {\n\t\tmarkPathByExistence(filePath, existedBeforePlan.get(filePath) ?? false, result);\n\t}\n\n\tseedCycleArtifactsFromAnalysis(rootDir, planned.cycleId, analysis, config);\n\n\treturn {\n\t\tcycleId: planned.cycleId,\n\t\tcycleDir: planned.cycleDir,\n\t\treportPath: planned.reportPath,\n\t\tbaselineReportPath: planned.baselineReportPath,\n\t\thypothesesPath: planned.hypothesesPath,\n\t\treusedExistingCycle,\n\t};\n}\n\nexport async function initIosmWorkspace(options: IosmInitOptions = {}): Promise<IosmInitResult> {\n\tconst rootDir = resolve(options.cwd ?? process.cwd());\n\tconst force = options.force ?? false;\n\n\tconst bootstrapAnalysis: IosmInitAnalysis = {\n\t\tgenerated_at: new Date().toISOString(),\n\t\tfiles_analyzed: 0,\n\t\tsource_file_count: 0,\n\t\ttest_file_count: 0,\n\t\tdoc_file_count: 0,\n\t\ttop_languages: [],\n\t\tcycle_scope: {\n\t\t\tmodules: [],\n\t\t\tservices: [],\n\t\t\tdomains: [],\n\t\t\tcontracts: [],\n\t\t\trationale: \"not analyzed\",\n\t\t},\n\t\tdetected_contracts: [],\n\t\tsource_systems: [],\n\t\tgoals: [\"Establish IOSM baseline metrics and define an initial cycle scope.\"],\n\t\traw_measurements: {},\n\t\tmetrics: createMetricRecord(() => null),\n\t\tmetric_confidences: createMetricRecord(() => 0.5),\n\t\tmetric_tiers: createMetricRecord(() => \"C\"),\n\t};\n\n\tconst result: IosmInitResult = {\n\t\trootDir,\n\t\tcreated: [],\n\t\toverwritten: [],\n\t\tskipped: [],\n\t\tanalysis: bootstrapAnalysis,\n\t};\n\n\tconst systemName = basename(rootDir);\n\n\tmkdirSync(rootDir, { recursive: true });\n\tmkdirSync(getIosmWorkspaceDir(rootDir), { recursive: true });\n\tmkdirSync(getIosmBaselinesDir(rootDir), { recursive: true });\n\tmkdirSync(getIosmCyclesDir(rootDir), { recursive: true });\n\n\twriteScaffoldFileWithExistenceCheck(getIosmConfigPath(rootDir), createIosmConfigTemplate(systemName), force, result);\n\n\tconst { config } = loadIosmConfig(rootDir);\n\tconst signals = await deriveProjectSignals(rootDir);\n\tconst analysis = deriveInitAnalysis(signals, config);\n\tresult.analysis = analysis;\n\n\tconst invariantsCatalog = createInvariantsCatalog(signals, analysis.generated_at);\n\tconst contractsCatalog = createContractCatalog(signals, analysis.generated_at);\n\tconst waiverRegister = createWaiverRegister(analysis.generated_at);\n\tconst decisionLog = createDecisionLog(systemName, analysis);\n\tconst patternLibrary = createPatternLibrary(analysis);\n\n\twriteScaffoldFileWithExistenceCheck(getIosmMetricsHistoryPath(rootDir), \"\", force, result);\n\twriteScaffoldFileWithExistenceCheck(\n\t\tgetIosmWaiverRegisterPath(rootDir),\n\t\tstringify(waiverRegister),\n\t\tforce,\n\t\tresult,\n\t);\n\twriteScaffoldFileWithExistenceCheck(\n\t\tgetIosmInvariantCatalogPath(rootDir),\n\t\tstringify(invariantsCatalog),\n\t\tforce,\n\t\tresult,\n\t);\n\twriteScaffoldFileWithExistenceCheck(\n\t\tgetIosmContractCatalogPath(rootDir),\n\t\tstringify(contractsCatalog),\n\t\tforce,\n\t\tresult,\n\t);\n\twriteScaffoldFileWithExistenceCheck(getIosmDecisionLogPath(rootDir), decisionLog, force, result);\n\twriteScaffoldFileWithExistenceCheck(getIosmPatternLibraryPath(rootDir), patternLibrary, force, result);\n\twriteScaffoldFileWithExistenceCheck(join(getIosmBaselinesDir(rootDir), \".gitkeep\"), \"\", force, result);\n\twriteScaffoldFileWithExistenceCheck(join(getIosmCyclesDir(rootDir), \".gitkeep\"), \"\", force, result);\n\n\tresult.cycle = planOrReuseCycle(rootDir, force, analysis, config, result);\n\tconst heuristicIndex = calculateIosmIndex(analysis.metrics, config.iosm.index.weights);\n\tconst heuristicConfidence = calculateDecisionConfidence(analysis.metric_confidences, config.iosm.index.weights);\n\tconst guideWrite = writeIosmGuideDocument(\n\t\t{\n\t\t\trootDir,\n\t\t\tcycleId: result.cycle?.cycleId,\n\t\t\tassessmentSource: \"heuristic\",\n\t\t\tmetrics: analysis.metrics,\n\t\t\tiosmIndex: heuristicIndex,\n\t\t\tdecisionConfidence: heuristicConfidence,\n\t\t\tgoals: analysis.goals,\n\t\t\tfilesAnalyzed: analysis.files_analyzed,\n\t\t\tsourceFileCount: analysis.source_file_count,\n\t\t\ttestFileCount: analysis.test_file_count,\n\t\t\tdocFileCount: analysis.doc_file_count,\n\t\t},\n\t\tforce,\n\t);\n\tif (guideWrite.written) {\n\t\tmarkPathByExistence(guideWrite.path, guideWrite.existed, result);\n\t} else {\n\t\tpushUnique(result.skipped, guideWrite.path);\n\t}\n\n\tif (result.cycle) {\n\t\ttry {\n\t\t\trecordIosmCycleHistory(rootDir, result.cycle.cycleId);\n\t\t} catch {\n\t\t\t// Keep init resilient even if history record cannot be persisted yet.\n\t\t}\n\t}\n\n\treturn result;\n}\n"]}
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Set([\n\t\".git\",\n\t\".hg\",\n\t\".svn\",\n\t\"node_modules\",\n\t\"dist\",\n\t\"build\",\n\t\"coverage\",\n\t\".next\",\n\t\".nuxt\",\n\t\".turbo\",\n\t\".cache\",\n\t\"target\",\n\t\"vendor\",\n\t\".idea\",\n\t\".vscode\",\n\t\".iosm\",\n]);\n\nconst SOURCE_EXTENSIONS = new Set([\n\t\".ts\",\n\t\".tsx\",\n\t\".js\",\n\t\".jsx\",\n\t\".mjs\",\n\t\".cjs\",\n\t\".py\",\n\t\".go\",\n\t\".rs\",\n\t\".java\",\n\t\".kt\",\n\t\".kts\",\n\t\".cs\",\n\t\".rb\",\n\t\".php\",\n\t\".swift\",\n\t\".c\",\n\t\".cc\",\n\t\".cpp\",\n\t\".h\",\n\t\".hpp\",\n\t\".sh\",\n\t\".sql\",\n]);\n\nconst TEXT_CONFIG_EXTENSIONS = new Set([\n\t\".json\",\n\t\".yaml\",\n\t\".yml\",\n\t\".toml\",\n\t\".md\",\n\t\".txt\",\n\t\".ini\",\n\t\".env\",\n\t\".xml\",\n]);\n\nconst KNOWN_TEXT_BASENAMES = new 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string[];\n\tanalysis: IosmInitAnalysis;\n\tcycle?: InitialCycleSummary;\n}\n\nfunction round3(value: number): number {\n\treturn Math.round(value * 1000) / 1000;\n}\n\nfunction clamp01(value: number): number {\n\treturn Math.min(1, Math.max(0, value));\n}\n\nfunction pushUnique(target: string[], value: string): void {\n\tif (!target.includes(value)) {\n\t\ttarget.push(value);\n\t}\n}\n\nfunction markPathByExistence(filePath: string, existedBefore: boolean, result: IosmInitResult): void {\n\tif (existedBefore) {\n\t\tpushUnique(result.overwritten, filePath);\n\t} else {\n\t\tpushUnique(result.created, filePath);\n\t}\n}\n\nfunction isTestPath(path: string): boolean {\n\tconst normalized = path.toLowerCase();\n\treturn (\n\t\tnormalized.includes(\"/__tests__/\") ||\n\t\tnormalized.includes(\"/tests/\") ||\n\t\tnormalized.includes(\"/test/\") ||\n\t\tnormalized.endsWith(\".test.ts\") ||\n\t\tnormalized.endsWith(\".test.tsx\") ||\n\t\tnormalized.endsWith(\".test.js\") ||\n\t\tnormalized.endsWith(\".test.jsx\") ||\n\t\tnormalized.endsWith(\".spec.ts\") ||\n\t\tnormalized.endsWith(\".spec.tsx\") ||\n\t\tnormalized.endsWith(\".spec.js\") ||\n\t\tnormalized.endsWith(\".spec.jsx\") ||\n\t\tnormalized.endsWith(\"_test.go\") ||\n\t\tnormalized.includes(\"/spec/\") ||\n\t\tnormalized.includes(\"/specs/\")\n\t);\n}\n\nfunction isDocPath(path: string): boolean {\n\tconst normalized = path.toLowerCase();\n\treturn (\n\t\tnormalized === \"readme.md\" ||\n\t\tnormalized.startsWith(\"docs/\") ||\n\t\tnormalized.endsWith(\".md\") ||\n\t\tnormalized.endsWith(\".mdx\")\n\t);\n}\n\nfunction isBinaryBuffer(buffer: Buffer): boolean {\n\tconst sampleLength = Math.min(buffer.length, 4096);\n\tfor (let index = 0; index < sampleLength; index++) {\n\t\tif (buffer[index] === 0) {\n\t\t\treturn true;\n\t\t}\n\t}\n\treturn false;\n}\n\nfunction shouldIgnoreDirectory(name: string): boolean {\n\tif (IGNORED_DIRECTORIES.has(name)) {\n\t\treturn true;\n\t}\n\tif (name.startsWith(\".\")) {\n\t\treturn name !== \".github\";\n\t}\n\treturn false;\n}\n\nfunction isPotentialTextFile(filePath: string, extension: string, basenameValue: string): boolean {\n\tif (SOURCE_EXTENSIONS.has(extension) || TEXT_CONFIG_EXTENSIONS.has(extension)) {\n\t\treturn true;\n\t}\n\tif (KNOWN_TEXT_BASENAMES.has(basenameValue)) {\n\t\treturn true;\n\t}\n\tconst lower = filePath.toLowerCase();\n\tif (lower.endsWith(\".proto\") || lower.endsWith(\".graphql\") || lower.endsWith(\".gql\")) {\n\t\treturn true;\n\t}\n\treturn false;\n}\n\nfunction collectProjectFiles(rootDir: string): ProjectFileSample[] {\n\tconst files: ProjectFileSample[] = [];\n\tconst queue: string[] = [rootDir];\n\n\twhile (queue.length > 0 && files.length < MAX_ANALYZED_FILES) {\n\t\tconst current = queue.shift();\n\t\tif (!current) {\n\t\t\tcontinue;\n\t\t}\n\n\t\tlet entries: Dirent[];\n\t\ttry {\n\t\t\tentries = readdirSync(current, { withFileTypes: true });\n\t\t} catch {\n\t\t\tcontinue;\n\t\t}\n\n\t\tfor (const entry of entries) {\n\t\t\tif (files.length >= MAX_ANALYZED_FILES) {\n\t\t\t\tbreak;\n\t\t\t}\n\n\t\t\tconst absolutePath = join(current, entry.name);\n\t\t\tconst relativePath = relative(rootDir, absolutePath).split(\"\\\\\").join(\"/\");\n\n\t\t\tif (entry.isDirectory()) {\n\t\t\t\tif (!shouldIgnoreDirectory(entry.name)) {\n\t\t\t\t\tqueue.push(absolutePath);\n\t\t\t\t}\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tif (!entry.isFile()) {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tconst extension = extname(entry.name).toLowerCase();\n\t\t\tif (!isPotentialTextFile(relativePath, extension, entry.name)) {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tlet bytes = 0;\n\t\t\ttry {\n\t\t\t\tbytes = statSync(absolutePath).size;\n\t\t\t} catch {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tif (bytes > MAX_TEXT_FILE_BYTES) {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tlet contentBuffer: Buffer;\n\t\t\ttry {\n\t\t\t\tcontentBuffer = readFileSync(absolutePath);\n\t\t\t} catch {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tif (isBinaryBuffer(contentBuffer)) {\n\t\t\t\tcontinue;\n\t\t\t}\n\n\t\t\tconst content = contentBuffer.toString(\"utf8\");\n\t\t\tconst lines = content.length === 0 ? 0 : content.split(/\\r?\\n/).length;\n\n\t\t\tfiles.push({\n\t\t\t\tpath: relativePath,\n\t\t\t\tlines,\n\t\t\t\tbytes,\n\t\t\t\textension,\n\t\t\t\tbasename: entry.name,\n\t\t\t});\n\t\t}\n\t}\n\n\treturn files;\n}\n\n// Concurrency-limited Promise.all using a simple semaphore\nasync function withConcurrencyLimit<T>(\n\titems: T[],\n\tlimit: number,\n\tfn: (item: T) => Promise<unknown>\n): Promise<void> {\n\tconst executing: Promise<unknown>[] = [];\n\tfor (const item of items) {\n\t\tconst p: Promise<unknown> = fn(item).then(() => executing.splice(executing.indexOf(p), 1));\n\t\texecuting.push(p);\n\t\tif (executing.length >= limit) await Promise.race(executing);\n\t}\n\tawait Promise.all(executing);\n}\n\nexport async function collectProjectFilesAsync(rootDir: string): Promise<ProjectFileSample[]> {\n\tconst files: ProjectFileSample[] = [];\n\tconst queue: string[] = [rootDir];\n\n\twhile (queue.length > 0 && files.length < MAX_ANALYZED_FILES) {\n\t\tconst currentBatch = queue.splice(0, queue.length);\n\t\tconst pendingFiles: Array<{ absolutePath: string; relativePath: string; extension: string; entryName: string }> = [];\n\n\t\tawait Promise.all(\n\t\t\tcurrentBatch.map(async (current) => {\n\t\t\t\tlet entries: Dirent[];\n\t\t\t\ttry {\n\t\t\t\t\tentries = await fsPromises.readdir(current, { withFileTypes: true });\n\t\t\t\t} catch {\n\t\t\t\t\treturn;\n\t\t\t\t}\n\n\t\t\t\tfor (const entry of entries) {\n\t\t\t\t\tif (files.length >= MAX_ANALYZED_FILES) {\n\t\t\t\t\t\tbreak;\n\t\t\t\t\t}\n\n\t\t\t\t\tconst absolutePath = join(current, entry.name);\n\t\t\t\t\tconst relativePath = relative(rootDir, absolutePath).split(\"\\\\\").join(\"/\");\n\n\t\t\t\t\tif (entry.isDirectory()) {\n\t\t\t\t\t\tif (!shouldIgnoreDirectory(entry.name)) {\n\t\t\t\t\t\t\tqueue.push(absolutePath);\n\t\t\t\t\t\t}\n\t\t\t\t\t\tcontinue;\n\t\t\t\t\t}\n\n\t\t\t\t\tif (!entry.isFile()) {\n\t\t\t\t\t\tcontinue;\n\t\t\t\t\t}\n\n\t\t\t\t\tconst extension = extname(entry.name).toLowerCase();\n\t\t\t\t\tif (!isPotentialTextFile(relativePath, extension, entry.name)) {\n\t\t\t\t\t\tcontinue;\n\t\t\t\t\t}\n\n\t\t\t\t\tpendingFiles.push({ absolutePath, relativePath, extension, entryName: entry.name });\n\t\t\t\t}\n\t\t\t}),\n\t\t);\n\n\t\tawait withConcurrencyLimit(pendingFiles, 10, async ({ absolutePath, relativePath, extension, entryName }) => {\n\t\t\tif (files.length >= MAX_ANALYZED_FILES) {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tlet bytes = 0;\n\t\t\ttry {\n\t\t\t\tbytes = (await fsPromises.stat(absolutePath)).size;\n\t\t\t} catch {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tif (bytes > MAX_TEXT_FILE_BYTES) {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tlet contentBuffer: Buffer;\n\t\t\ttry {\n\t\t\t\tcontentBuffer = Buffer.from(await fsPromises.readFile(absolutePath));\n\t\t\t} catch {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tif (isBinaryBuffer(contentBuffer)) {\n\t\t\t\treturn;\n\t\t\t}\n\n\t\t\tconst content = contentBuffer.toString(\"utf8\");\n\t\t\tconst lines = content.length === 0 ? 0 : content.split(/\\r?\\n/).length;\n\n\t\t\tif (files.length < MAX_ANALYZED_FILES) {\n\t\t\t\tfiles.push({\n\t\t\t\t\tpath: relativePath,\n\t\t\t\t\tlines,\n\t\t\t\t\tbytes,\n\t\t\t\t\textension,\n\t\t\t\t\tbasename: entryName,\n\t\t\t\t});\n\t\t\t}\n\t\t});\n\t}\n\n\treturn files;\n}\n\nfunction toMetricTier(confidence: number): IosmEvidenceTier {\n\tif (confidence >= 0.85) {\n\t\treturn \"A\";\n\t}\n\tif (confidence >= 0.65) {\n\t\treturn \"B\";\n\t}\n\treturn \"C\";\n}\n\nfunction detectContractSignals(files: ProjectFileSample[]): ContractSignal[] {\n\tconst contracts: ContractSignal[] = [];\n\tfor (const file of files) {\n\t\tconst normalized = file.path.toLowerCase();\n\t\tif (normalized.endsWith(\".proto\")) {\n\t\t\tcontracts.push({\n\t\t\t\tkind: \"protobuf\",\n\t\t\t\tpath: file.path,\n\t\t\t\tdescription: \"Protocol buffer service or schema\",\n\t\t\t});\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (normalized.endsWith(\".graphql\") || normalized.endsWith(\".gql\")) {\n\t\t\tcontracts.push({\n\t\t\t\tkind: \"graphql\",\n\t\t\t\tpath: file.path,\n\t\t\t\tdescription: \"GraphQL schema contract\",\n\t\t\t});\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (\n\t\t\t(normalized.includes(\"openapi\") || normalized.includes(\"swagger\")) &&\n\t\t\t(normalized.endsWith(\".yaml\") || normalized.endsWith(\".yml\") || normalized.endsWith(\".json\"))\n\t\t) {\n\t\t\tcontracts.push({\n\t\t\t\tkind: \"openapi\",\n\t\t\t\tpath: file.path,\n\t\t\t\tdescription: \"OpenAPI/Swagger API contract\",\n\t\t\t});\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (normalized.includes(\"/contracts/\") || normalized.includes(\"contract\")) {\n\t\t\tif (\n\t\t\t\tnormalized.endsWith(\".yaml\") ||\n\t\t\t\tnormalized.endsWith(\".yml\") ||\n\t\t\t\tnormalized.endsWith(\".json\") ||\n\t\t\t\tnormalized.endsWith(\".md\")\n\t\t\t) {\n\t\t\t\tcontracts.push({\n\t\t\t\t\tkind: \"custom\",\n\t\t\t\t\tpath: file.path,\n\t\t\t\t\tdescription: \"Repository contract declaration\",\n\t\t\t\t});\n\t\t\t}\n\t\t}\n\t}\n\n\tconst unique = new Map<string, ContractSignal>();\n\tfor (const contract of contracts) {\n\t\tconst key = `${contract.kind}:${contract.path}`;\n\t\tif (!unique.has(key)) {\n\t\t\tunique.set(key, contract);\n\t\t}\n\t}\n\n\treturn Array.from(unique.values()).slice(0, 20);\n}\n\nfunction detectTopModules(files: ProjectFileSample[]): {\n\tmodules: string[];\n\tservices: string[];\n\tdomains: string[];\n} {\n\tconst moduleWeights = new Map<string, number>();\n\tconst serviceWeights = new Map<string, number>();\n\tconst domainCandidates = new Set<string>();\n\n\tfor (const file of files) {\n\t\tif (!SOURCE_EXTENSIONS.has(file.extension) || isTestPath(file.path)) {\n\t\t\tcontinue;\n\t\t}\n\n\t\tconst segments = file.path.split(\"/\").filter((segment) => segment.length > 0);\n\t\tif (segments.length === 0) {\n\t\t\tcontinue;\n\t\t}\n\n\t\tif (segments[0] === \"src\" && segments.length >= 2) {\n\t\t\tconst moduleName = segments[1];\n\t\t\tmoduleWeights.set(moduleName, (moduleWeights.get(moduleName) ?? 0) + file.lines + 1);\n\t\t\tif (DOMAIN_HINTS.some((hint) => moduleName.toLowerCase().includes(hint))) {\n\t\t\t\tdomainCandidates.add(moduleName);\n\t\t\t}\n\t\t}\n\n\t\tif (segments.length >= 2 && (segments[0] === \"packages\" || segments[0] === \"modules\")) {\n\t\t\tconst moduleName = `${segments[0]}/${segments[1]}`;\n\t\t\tmoduleWeights.set(moduleName, (moduleWeights.get(moduleName) ?? 0) + file.lines + 1);\n\t\t}\n\n\t\tif (PRIMARY_SERVICE_DIRS.has(segments[0])) {\n\t\t\tconst serviceName = segments[1] ? `${segments[0]}/${segments[1]}` : segments[0];\n\t\t\tserviceWeights.set(serviceName, (serviceWeights.get(serviceName) ?? 0) + file.lines + 1);\n\t\t\tif (segments[1] && DOMAIN_HINTS.some((hint) => segments[1].toLowerCase().includes(hint))) {\n\t\t\t\tdomainCandidates.add(segments[1]);\n\t\t\t}\n\t\t}\n\t}\n\n\tconst sortByWeight = (weights: Map<string, number>, limit: number): string[] =>\n\t\tArray.from(weights.entries())\n\t\t\t.sort((left, right) => right[1] - left[1])\n\t\t\t.map(([name]) => name)\n\t\t\t.slice(0, limit);\n\n\tconst modules = sortByWeight(moduleWeights, 12);\n\tconst services = sortByWeight(serviceWeights, 8);\n\tlet domains = Array.from(domainCandidates).slice(0, 8);\n\n\tif (domains.length === 0) {\n\t\tdomains = modules\n\t\t\t.map((moduleName) => moduleName.split(\"/\").pop() ?? moduleName)\n\t\t\t.filter((entry) => entry.length > 0)\n\t\t\t.slice(0, 6);\n\t}\n\n\treturn { modules, services, domains };\n}\n\nfunction detectDependencyCount(rootDir: string): number {\n\tconst packageJsonPath = join(rootDir, \"package.json\");\n\tif (!existsSync(packageJsonPath)) {\n\t\treturn 0;\n\t}\n\n\ttry {\n\t\tconst parsed = JSON.parse(readFileSync(packageJsonPath, \"utf8\")) as UnknownRecord;\n\t\tconst dependencies = parsed.dependencies;\n\t\tconst devDependencies = parsed.devDependencies;\n\t\tconst depCount = dependencies && typeof dependencies === \"object\" ? Object.keys(dependencies as UnknownRecord).length : 0;\n\t\tconst devDepCount =\n\t\t\tdevDependencies && typeof devDependencies === \"object\"\n\t\t\t\t? Object.keys(devDependencies as UnknownRecord).length\n\t\t\t\t: 0;\n\t\treturn depCount + devDepCount;\n\t} catch {\n\t\treturn 0;\n\t}\n}\n\nfunction detectSourceSystems(rootDir: string, files: ProjectFileSample[], topLanguages: LanguageStat[]): string[] {\n\tconst systems: string[] = [];\n\tconst lowerPaths = new Set(files.map((file) => file.path.toLowerCase()));\n\n\tif (lowerPaths.has(\"package.json\")) {\n\t\tsystems.push(\"npm\");\n\t}\n\tif (lowerPaths.has(\"pnpm-workspace.yaml\")) {\n\t\tsystems.push(\"pnpm-workspace\");\n\t}\n\tif (lowerPaths.has(\"go.mod\")) {\n\t\tsystems.push(\"go-mod\");\n\t}\n\tif (lowerPaths.has(\"cargo.toml\")) {\n\t\tsystems.push(\"cargo\");\n\t}\n\tif (lowerPaths.has(\"pyproject.toml\") || lowerPaths.has(\"requirements.txt\")) {\n\t\tsystems.push(\"python-packaging\");\n\t}\n\n\tif (existsSync(join(rootDir, \".github\", \"workflows\"))) {\n\t\tsystems.push(\"github-actions\");\n\t}\n\n\tfor (const language of topLanguages.slice(0, 3)) {\n\t\tsystems.push(`lang:${language.language}`);\n\t}\n\n\treturn Array.from(new Set(systems));\n}\n\nfunction computeNamingConsistency(files: ProjectFileSample[]): number {\n\tlet kebab = 0;\n\tlet snake = 0;\n\tlet camel = 0;\n\tlet other = 0;\n\n\tfor (const file of files) {\n\t\tif (!SOURCE_EXTENSIONS.has(file.extension) || isTestPath(file.path)) {\n\t\t\tcontinue;\n\t\t}\n\t\tconst baseWithoutExt = file.basename.replace(/\\.[^.]+$/, \"\");\n\t\tif (/^[a-z0-9]+(?:-[a-z0-9]+)+$/.test(baseWithoutExt)) {\n\t\t\tkebab += 1;\n\t\t} else if (/^[a-z0-9]+(?:_[a-z0-9]+)+$/.test(baseWithoutExt)) {\n\t\t\tsnake += 1;\n\t\t} else if (/^[a-z]+(?:[A-Z][a-z0-9]*)+$/.test(baseWithoutExt)) {\n\t\t\tcamel += 1;\n\t\t} else {\n\t\t\tother += 1;\n\t\t}\n\t}\n\n\tconst total = kebab + snake + camel + other;\n\tif (total === 0) {\n\t\treturn 0.65;\n\t}\n\n\tconst dominant = Math.max(kebab, snake, camel, 0);\n\tconst consistency = dominant / total;\n\treturn round3(clamp01(0.45 + consistency * 0.5));\n}\n\nasync function deriveProjectSignals(rootDir: string): Promise<ProjectSignals> {\n\tconst files = await collectProjectFilesAsync(rootDir);\n\n\tconst languageAccumulator = new Map<string, { files: number; lines: number }>();\n\tlet sourceFileCount = 0;\n\tlet testFileCount = 0;\n\tlet docFileCount = 0;\n\tlet hasCiSignals = false;\n\n\tfor (const file of files) {\n\t\tif (isDocPath(file.path)) {\n\t\t\tdocFileCount += 1;\n\t\t}\n\t\tif (file.path.toLowerCase().startsWith(\".github/workflows/\")) {\n\t\t\thasCiSignals = true;\n\t\t}\n\t\tif (!SOURCE_EXTENSIONS.has(file.extension)) {\n\t\t\tcontinue;\n\t\t}\n\n\t\tsourceFileCount += 1;\n\t\tif (isTestPath(file.path)) {\n\t\t\ttestFileCount += 1;\n\t\t}\n\n\t\tconst language = EXTENSION_TO_LANGUAGE.get(file.extension) ?? \"Other\";\n\t\tconst current = languageAccumulator.get(language) ?? { files: 0, lines: 0 };\n\t\tcurrent.files += 1;\n\t\tcurrent.lines += file.lines;\n\t\tlanguageAccumulator.set(language, current);\n\t}\n\n\tconst topLanguages = Array.from(languageAccumulator.entries())\n\t\t.sort((left, right) => right[1].lines - left[1].lines)\n\t\t.map(([language, stats]) => ({\n\t\t\tlanguage,\n\t\t\tfiles: stats.files,\n\t\t\tlines: stats.lines,\n\t\t}))\n\t\t.slice(0, 6);\n\n\tconst { modules, services, domains } = detectTopModules(files);\n\tconst contracts = detectContractSignals(files);\n\tconst dependencyCount = detectDependencyCount(rootDir);\n\tconst namingConsistency = computeNamingConsistency(files);\n\tconst testRatio = sourceFileCount === 0 ? 0 : clamp01(testFileCount / Math.max(sourceFileCount, 1));\n\tconst docsRatio = files.length === 0 ? 0 : clamp01(docFileCount / Math.max(files.length, 1));\n\tconst sourceSystems = detectSourceSystems(rootDir, files, topLanguages);\n\n\treturn {\n\t\tfilesAnalyzed: files.length,\n\t\tsourceFileCount,\n\t\ttestFileCount,\n\t\tdocFileCount,\n\t\ttopLanguages,\n\t\tmodules,\n\t\tservices,\n\t\tdomains,\n\t\tcontracts,\n\t\tsourceSystems,\n\t\ttestRatio,\n\t\tdocsRatio,\n\t\tnamingConsistency,\n\t\tdependencyCount,\n\t\thasCiSignals,\n\t};\n}\n\nfunction buildCycleScope(signals: ProjectSignals, maxScopeItems: number): IosmCycleScope {\n\tconst scoped: IosmCycleScope = {\n\t\tmodules: [],\n\t\tservices: [],\n\t\tdomains: [],\n\t\tcontracts: [],\n\t\trationale: \"Auto-filled from repository structure during iosm init.\",\n\t};\n\n\tlet total = 0;\n\tconst append = (key: \"modules\" | \"services\" | \"domains\" | \"contracts\", values: string[]) => {\n\t\tfor (const value of values) {\n\t\t\tif (total >= maxScopeItems) {\n\t\t\t\treturn;\n\t\t\t}\n\t\t\tif (!scoped[key].includes(value)) {\n\t\t\t\tscoped[key].push(value);\n\t\t\t\ttotal += 1;\n\t\t\t}\n\t\t}\n\t};\n\n\tappend(\"modules\", signals.modules.slice(0, 8));\n\tappend(\"services\", signals.services.slice(0, 6));\n\tappend(\n\t\t\"domains\",\n\t\tsignals.domains\n\t\t\t.map((domain) => domain.split(\"/\").pop() ?? domain)\n\t\t\t.filter((domain) => domain.length > 0)\n\t\t\t.slice(0, 6),\n\t);\n\tappend(\n\t\t\"contracts\",\n\t\tsignals.contracts\n\t\t\t.map((contract) => contract.path)\n\t\t\t.slice(0, 4),\n\t);\n\n\tif (total === 0) {\n\t\tscoped.modules = [\"repository\"];\n\t\ttotal = 1;\n\t}\n\n\tconst sourceLines = [`scope_items=${total}`, `max_scope_items=${maxScopeItems}`];\n\tif (signals.modules.length > scoped.modules.length) {\n\t\tsourceLines.push(`modules_truncated=${signals.modules.length - scoped.modules.length}`);\n\t}\n\tif (signals.services.length > scoped.services.length) {\n\t\tsourceLines.push(`services_truncated=${signals.services.length - scoped.services.length}`);\n\t}\n\tscoped.rationale = `Auto-filled from repository structure (${sourceLines.join(\", \")}).`;\n\n\treturn scoped;\n}\n\nfunction buildRawMeasurements(signals: ProjectSignals): Record<string, unknown> {\n\tconst moduleCount = Math.max(signals.modules.length, 1);\n\tconst contractCount = signals.contracts.length;\n\tconst docsSignal = clamp01(0.25 + signals.docsRatio * 2.2 + (signals.docFileCount > 0 ? 0.1 : 0));\n\tconst ciBoost = signals.hasCiSignals ? 0.12 : 0;\n\n\tconst semanticGlossaryCoverage = round3(clamp01(0.45 + docsSignal * 0.45));\n\tconst semanticNamingConsistency = round3(clamp01(signals.namingConsistency));\n\tconst semanticAmbiguityRatio = round3(clamp01(0.35 - docsSignal * 0.2));\n\n\tconst logicInvariantPassRate = round3(clamp01(0.52 + signals.testRatio * 0.4 + ciBoost * 0.3));\n\tconst inferredInvariantCount = Math.max(3, Math.min(10, moduleCount + (contractCount > 0 ? 1 : 0)));\n\n\tconst performanceLatencyScore = round3(clamp01(0.48 + signals.testRatio * 0.22 + ciBoost));\n\tconst performanceReliabilityScore = round3(clamp01(0.58 + signals.testRatio * 0.2 + ciBoost));\n\tconst performanceResilienceScore = round3(clamp01(0.5 + (contractCount > 0 ? 0.08 : 0) + signals.testRatio * 0.18));\n\n\tconst simplicityApiSurfaceScore = round3(clamp01(1 - Math.min(0.65, moduleCount / 22)));\n\tconst simplicityDependencyHygiene = round3(clamp01(1 - Math.min(0.7, signals.dependencyCount / 140)));\n\tconst simplicityOnboardingScore = round3(clamp01(0.48 + docsSignal * 0.45));\n\n\tconst modularityCouplingScore = round3(clamp01(1 - Math.min(0.72, moduleCount / 20)));\n\tconst modularityCohesionScore = round3(clamp01(0.46 + Math.min(0.24, 1 / moduleCount) + (contractCount > 0 ? 0.12 : 0)));\n\tconst modularityContractScore = round3(contractCount > 0 ? 1 : 0.58);\n\tconst modularityChangeSurfaceScore = round3(clamp01(1 - Math.min(0.82, moduleCount / 18)));\n\tconst modularityChangeSurface = Math.max(1, Math.min(12, moduleCount));\n\n\tconst flowLeadTimeScore = round3(clamp01(0.45 + signals.testRatio * 0.2 + ciBoost));\n\tconst flowDeployFrequencyScore = round3(clamp01(0.4 + ciBoost + signals.docsRatio * 0.08));\n\tconst flowChangeFailureScore = round3(clamp01(0.62 + signals.testRatio * 0.25));\n\tconst flowReviewLatencyScore = round3(clamp01(0.5 + ciBoost + signals.docsRatio * 0.1));\n\n\treturn {\n\t\tsemantic: {\n\t\t\tglossary_coverage: semanticGlossaryCoverage,\n\t\t\tnaming_consistency: semanticNamingConsistency,\n\t\t\tambiguity_ratio: semanticAmbiguityRatio,\n\t\t},\n\t\tlogic: {\n\t\t\tinvariant_pass_rate: logicInvariantPassRate,\n\t\t\tpassed_invariants: Math.round(inferredInvariantCount * logicInvariantPassRate),\n\t\t\ttotal_invariants: inferredInvariantCount,\n\t\t},\n\t\tperformance: {\n\t\t\tlatency_score: performanceLatencyScore,\n\t\t\treliability_score: performanceReliabilityScore,\n\t\t\tresilience_score: performanceResilienceScore,\n\t\t\terror_budget_respected: performanceReliabilityScore >= 0.7,\n\t\t},\n\t\tsimplicity: {\n\t\t\tapi_surface_score: simplicityApiSurfaceScore,\n\t\t\tdependency_hygiene: simplicityDependencyHygiene,\n\t\t\tonboarding_score: simplicityOnboardingScore,\n\t\t},\n\t\tmodularity: {\n\t\t\tcoupling_score: modularityCouplingScore,\n\t\t\tcohesion_score: modularityCohesionScore,\n\t\t\tcontract_score: modularityContractScore,\n\t\t\tchange_surface_score: modularityChangeSurfaceScore,\n\t\t\tchange_surface: modularityChangeSurface,\n\t\t\tcontracts_pass: modularityContractScore >= 0.8,\n\t\t},\n\t\tflow: {\n\t\t\tlead_time_score: flowLeadTimeScore,\n\t\t\tdeploy_frequency_score: flowDeployFrequencyScore,\n\t\t\tchange_failure_score: flowChangeFailureScore,\n\t\t\treview_latency_score: flowReviewLatencyScore,\n\t\t},\n\t};\n}\n\nfunction buildMetricConfidences(signals: ProjectSignals): IosmMetricRecord<number> {\n\tconst docsConfidence = clamp01(0.52 + signals.docsRatio * 0.35);\n\tconst testConfidence = clamp01(0.5 + signals.testRatio * 0.4 + (signals.hasCiSignals ? 0.08 : 0));\n\tconst dependencyConfidence = clamp01(0.55 + (signals.dependencyCount > 0 ? 0.12 : 0));\n\n\treturn {\n\t\tsemantic: round3(clamp01(docsConfidence)),\n\t\tlogic: round3(clamp01(testConfidence)),\n\t\tperformance: round3(clamp01(0.52 + signals.testRatio * 0.22 + (signals.hasCiSignals ? 0.1 : 0))),\n\t\tsimplicity: round3(clamp01(Math.max(docsConfidence, dependencyConfidence - 0.05))),\n\t\tmodularity: round3(clamp01(0.56 + (signals.modules.length > 0 ? 0.08 : 0) + (signals.contracts.length > 0 ? 0.08 : 0))),\n\t\tflow: round3(clamp01(0.48 + (signals.hasCiSignals ? 0.14 : 0))),\n\t};\n}\n\nfunction goalForMetric(metric: IosmMetric): string {\n\tswitch (metric) {\n\t\tcase \"semantic\":\n\t\t\treturn \"Increase glossary coverage and naming consistency for core domain language.\";\n\t\tcase \"logic\":\n\t\t\treturn \"Increase invariant/test confidence for critical logic paths and edge cases.\";\n\t\tcase \"performance\":\n\t\t\treturn \"Improve latency and reliability signals for primary user journeys.\";\n\t\tcase \"simplicity\":\n\t\t\treturn \"Reduce onboarding friction by shrinking API/dependency surface complexity.\";\n\t\tcase \"modularity\":\n\t\t\treturn \"Reduce coupling and change surface while strengthening contract boundaries.\";\n\t\tcase \"flow\":\n\t\t\treturn \"Improve lead-time and review-latency flow signals for safer delivery cadence.\";\n\t}\n}\n\nfunction buildGoals(metrics: IosmMetricRecord<number | null>): string[] {\n\tconst ordered = IOSM_METRICS.map((metric) => ({ metric, value: metrics[metric] ?? 0 }))\n\t\t.sort((left, right) => left.value - right.value)\n\t\t.slice(0, 3)\n\t\t.map((entry) => goalForMetric(entry.metric));\n\n\tif (ordered.length === 0) {\n\t\treturn [\"Establish IOSM baseline metrics and define an initial cycle scope.\"];\n\t}\n\n\tconst unique = Array.from(new Set(ordered));\n\tif (unique.length === 1) {\n\t\tunique.push(\"Establish IOSM baseline metrics and define an initial cycle scope.\");\n\t}\n\treturn unique.slice(0, 3);\n}\n\nfunction createIosmConfigTemplate(systemName: string): string {\n\tconst encodedSystemName = JSON.stringify(systemName);\n\n\treturn `iosm:\n  metadata:\n    system_name: ${encodedSystemName}\n    scope: repository\n    criticality_profile: standard\n    delivery_boundary: ${encodedSystemName}\n  planning:\n    use_economic_decision: true\n    prioritization_formula: wsjf_confidence\n    min_confidence: 0.70\n    hypothesis_required: true\n    cycle_scope_required: true\n  cycle_capacity:\n    max_goals: 3\n    max_scope_items: 5\n    max_expected_change_surface: 3\n  cycle_policy:\n    max_iterations_per_phase: 3\n    stabilization:\n      target_index: 0.98\n      consecutive_cycles: 3\n      global_metric_floor: 0.60\n      max_consecutive_unexplained_declines: 2\n      metric_floors:\n        logic: 0.95\n        performance: 0.85\n  quality_gates:\n    gate_I:\n      semantic_min: 0.95\n      logical_consistency_min: 1.00\n      duplication_max: 0.05\n    gate_O:\n      latency_ms:\n        p50_max: 60\n        p95_max: 150\n        p99_max: 250\n      error_budget_respected: true\n      chaos_pass_rate_min: 1.00\n    gate_S:\n      at_least_one_dimension: true\n      api_surface_reduction_min: 0.20\n      dependency_hygiene_min: 0.95\n      onboarding_time_minutes_max: 15\n      regression_budget_max: 0\n    gate_M:\n      change_surface_max: 3\n      coupling_max: 0.20\n      cohesion_min: 0.80\n      contracts_pass: true\n  guardrails:\n    max_negative_delta:\n      semantic: 0.02\n      logic: 0.00\n      performance: 0.03\n      simplicity: 0.03\n      modularity: 0.02\n      flow: 0.02\n  evidence:\n    min_decision_confidence: 0.80\n    freshness_sla_hours:\n      tier_a: 24\n      tier_b: 168\n    min_metric_confidence:\n      semantic: 0.70\n      logic: 0.90\n      performance: 0.90\n      simplicity: 0.70\n      modularity: 0.70\n      flow: 0.80\n  waivers:\n    max_duration_days: 14\n    require_human_approval: true\n  metric_targets:\n    semantic:\n      glossary_coverage_min: 0.95\n      naming_consistency_min: 0.95\n      ambiguity_ratio_max: 0.05\n    logic:\n      invariant_pass_rate_min: 1.00\n    performance:\n      latency_ms:\n        p50_max: 60\n        p95_max: 150\n        p99_max: 250\n    simplicity:\n      onboarding_time_minutes_max: 15\n    modularity:\n      change_surface_max: 3\n    flow:\n      lead_time_hours_max: 24\n      deploy_frequency_per_week_min: 5\n      change_failure_rate_max: 0.15\n      review_latency_hours_max: 24\n  index:\n    weights:\n      semantic: 0.15\n      logic: 0.20\n      performance: 0.25\n      simplicity: 0.15\n      modularity: 0.15\n      flow: 0.10\n  automation:\n    allow_agents: true\n    human_approval_required_for:\n      - waivers\n      - public_contract_changes\n      - threshold_relaxation\n      - destructive_data_changes\n  reporting:\n    persist_history: true\n    output_format: json\n  learning:\n    update_pattern_library: true\n    update_decision_log: true\n    update_glossary: true\n`;\n}\n\nfunction writeScaffoldFileWithExistenceCheck(\n\tfilePath: string,\n\tcontent: string,\n\tforce: boolean,\n\tresult: IosmInitResult,\n): void {\n\tconst existed = existsSync(filePath);\n\tif (existed && !force) {\n\t\tpushUnique(result.skipped, filePath);\n\t\treturn;\n\t}\n\n\twriteFileSync(filePath, content, \"utf8\");\n\tmarkPathByExistence(filePath, existed, result);\n}\n\nfunction writeJson(filePath: string, value: unknown): void {\n\twriteFileSync(filePath, `${JSON.stringify(value, null, 2)}\\n`, \"utf8\");\n}\n\nfunction readJson<T>(filePath: string): T {\n\treturn JSON.parse(readFileSync(filePath, \"utf8\")) as T;\n}\n\nfunction countScopeItems(scope: IosmCycleScope): number {\n\treturn scope.modules.length + scope.services.length + scope.domains.length + scope.contracts.length;\n}\n\nfunction createInvariantsCatalog(signals: ProjectSignals, nowIso: string): UnknownRecord {\n\tconst invariants: UnknownRecord[] = [\n\t\t{\n\t\t\tid: \"inv-build-green\",\n\t\t\tstatement: \"Build/test pipeline remains green for cycle scope changes.\",\n\t\t\tstatus: \"active\",\n\t\t\tevidence_tier: signals.hasCiSignals ? \"B\" : \"C\",\n\t\t\towner: \"unassigned\",\n\t\t},\n\t\t{\n\t\t\tid: \"inv-contract-compatibility\",\n\t\t\tstatement: \"Public contracts are backward compatible unless an approved waiver exists.\",\n\t\t\tstatus: \"active\",\n\t\t\tevidence_tier: signals.contracts.length > 0 ? \"B\" : \"C\",\n\t\t\towner: \"unassigned\",\n\t\t},\n\t\t{\n\t\t\tid: \"inv-metric-freshness\",\n\t\t\tstatement: \"IOSM baseline and cycle metrics must be refreshed each cycle before decisioning.\",\n\t\t\tstatus: \"active\",\n\t\t\tevidence_tier: \"C\",\n\t\t\towner: \"unassigned\",\n\t\t},\n\t];\n\n\treturn {\n\t\tversion: 1,\n\t\tgenerated_at: nowIso,\n\t\tinvariants,\n\t};\n}\n\nfunction createContractCatalog(signals: ProjectSignals, nowIso: string): UnknownRecord {\n\treturn {\n\t\tversion: 1,\n\t\tgenerated_at: nowIso,\n\t\tcontracts: signals.contracts.map((contract, index) => ({\n\t\t\tid: `contract-${String(index + 1).padStart(3, \"0\")}`,\n\t\t\tkind: contract.kind,\n\t\t\tpath: contract.path,\n\t\t\tdescription: contract.description,\n\t\t\tstatus: \"tracked\",\n\t\t\towner: \"unassigned\",\n\t\t})),\n\t};\n}\n\nfunction createWaiverRegister(nowIso: string): UnknownRecord {\n\treturn {\n\t\tversion: 1,\n\t\tgenerated_at: nowIso,\n\t\twaivers: [],\n\t};\n}\n\nfunction formatMetricInline(metric: IosmMetric, value: number | null): string {\n\treturn `${metric}=${value === null ? \"n/a\" : value.toFixed(3)}`;\n}\n\nfunction createDecisionLog(systemName: string, analysis: IosmInitAnalysis): string {\n\tconst metricLine = IOSM_METRICS.map((metric) => formatMetricInline(metric, analysis.metrics[metric])).join(\", \");\n\tconst confidenceLine = IOSM_METRICS.map((metric) => `${metric}=${analysis.metric_confidences[metric].toFixed(2)}`).join(\", \");\n\tconst goals = analysis.goals.map((goal) => `- ${goal}`).join(\"\\n\");\n\tconst contractsLine =\n\t\tanalysis.detected_contracts.length > 0\n\t\t\t? analysis.detected_contracts.map((contract) => `${contract.kind}:${contract.path}`).join(\", \")\n\t\t\t: \"none\";\n\tconst topLanguagesLine =\n\t\tanalysis.top_languages.length > 0\n\t\t\t? analysis.top_languages\n\t\t\t\t\t.map((language) => `${language.language}(${language.files} files)`)\n\t\t\t\t\t.join(\", \")\n\t\t\t: \"unknown\";\n\n\treturn [\n\t\t\"# IOSM Decision Log\",\n\t\t\"\",\n\t\t`## Initialization Snapshot (${analysis.generated_at})`,\n\t\t`- System: ${systemName}`,\n\t\t`- Files analyzed: ${analysis.files_analyzed}`,\n\t\t`- Source files: ${analysis.source_file_count}`,\n\t\t`- Test files: ${analysis.test_file_count}`,\n\t\t`- Docs files: ${analysis.doc_file_count}`,\n\t\t`- Top languages: ${topLanguagesLine}`,\n\t\t`- Contracts detected: ${contractsLine}`,\n\t\t`- Baseline metrics: ${metricLine}`,\n\t\t`- Metric confidence: ${confidenceLine}`,\n\t\t\"\",\n\t\t\"## Initial Decision\",\n\t\t\"- Decision: CONTINUE\",\n\t\t\"- Rationale: Project baseline captured; continue through IOSM phases with evidence upgrades.\",\n\t\t\"\",\n\t\t\"## Initial Goals\",\n\t\tgoals,\n\t\t\"\",\n\t].join(\"\\n\");\n}\n\nfunction createPatternLibrary(analysis: IosmInitAnalysis): string {\n\tconst modulesLine = analysis.cycle_scope.modules.length > 0 ? analysis.cycle_scope.modules.join(\", \") : \"none\";\n\tconst servicesLine = analysis.cycle_scope.services.length > 0 ? analysis.cycle_scope.services.join(\", \") : \"none\";\n\tconst domainsLine = analysis.cycle_scope.domains.length > 0 ? analysis.cycle_scope.domains.join(\", \") : \"none\";\n\tconst contractsLine =\n\t\tanalysis.detected_contracts.length > 0\n\t\t\t? analysis.detected_contracts.map((contract) => contract.path).join(\", \")\n\t\t\t: \"none\";\n\n\treturn [\n\t\t\"# IOSM Pattern Library\",\n\t\t\"\",\n\t\t`## Baseline Patterns (${analysis.generated_at})`,\n\t\t`- Scoped modules: ${modulesLine}`,\n\t\t`- Scoped services: ${servicesLine}`,\n\t\t`- Scoped domains: ${domainsLine}`,\n\t\t`- Contracts: ${contractsLine}`,\n\t\t\"\",\n\t\t\"## Notes\",\n\t\t\"- Entries above are auto-detected during `iosm init` and should be refined during Improve/Shrink phases.\",\n\t\t\"- Capture validated reusable tactics here after cycle completion.\",\n\t\t\"\",\n\t].join(\"\\n\");\n}\n\nfunction deriveInitAnalysis(signals: ProjectSignals, config: IosmConfig): IosmInitAnalysis {\n\tconst nowIso = new Date().toISOString();\n\tconst maxScopeItems = Math.max(\n\t\t1,\n\t\tMath.min(\n\t\t\tconfig.iosm.cycle_capacity.max_scope_items,\n\t\t\tconfig.iosm.cycle_capacity.max_expected_change_surface,\n\t\t),\n\t);\n\tconst cycleScope = buildCycleScope(signals, maxScopeItems);\n\tconst rawMeasurements = buildRawMeasurements(signals);\n\tconst metrics = calculateIosmMetricsFromRawMeasurements(rawMeasurements, config);\n\tconst metricConfidences = buildMetricConfidences(signals);\n\tconst metricTiers = createMetricRecord((metric) => toMetricTier(metricConfidences[metric]));\n\tconst goals = buildGoals(metrics);\n\n\treturn {\n\t\tgenerated_at: nowIso,\n\t\tfiles_analyzed: signals.filesAnalyzed,\n\t\tsource_file_count: signals.sourceFileCount,\n\t\ttest_file_count: signals.testFileCount,\n\t\tdoc_file_count: signals.docFileCount,\n\t\ttop_languages: signals.topLanguages,\n\t\tcycle_scope: cycleScope,\n\t\tdetected_contracts: signals.contracts,\n\t\tsource_systems: signals.sourceSystems,\n\t\tgoals,\n\t\traw_measurements: rawMeasurements,\n\t\tmetrics,\n\t\tmetric_confidences: metricConfidences,\n\t\tmetric_tiers: metricTiers,\n\t};\n}\n\nfunction seedCycleArtifactsFromAnalysis(\n\trootDir: string,\n\tcycleId: string,\n\tanalysis: IosmInitAnalysis,\n\tconfig: IosmConfig,\n): void {\n\tconst baselinePath = getIosmBaselineReportPath(cycleId, rootDir);\n\tconst reportPath = getIosmCycleReportPath(cycleId, rootDir);\n\tconst hypothesesPath = getIosmHypothesesPath(cycleId, rootDir);\n\n\tif (!existsSync(baselinePath) || !existsSync(reportPath) || !existsSync(hypothesesPath)) {\n\t\treturn;\n\t}\n\n\tconst baseline = readJson<IosmBaselineReport>(baselinePath);\n\tbaseline.cycle_scope = analysis.cycle_scope;\n\tbaseline.source_systems = analysis.source_systems.length > 0 ? analysis.source_systems : baseline.source_systems;\n\tbaseline.baseline_metrics = {\n\t\tvalues: analysis.metrics,\n\t\traw_measurements: analysis.raw_measurements,\n\t};\n\tbaseline.captured_at = analysis.generated_at;\n\twriteJson(baselinePath, baseline);\n\n\tconst report = readJson<IosmCycleReport>(reportPath);\n\treport.status = \"active\";\n\treport.cycle_scope = analysis.cycle_scope;\n\treport.raw_measurements = analysis.raw_measurements;\n\treport.metrics = analysis.metrics;\n\treport.metric_confidences = analysis.metric_confidences;\n\treport.metric_tiers = analysis.metric_tiers;\n\treport.metric_deltas = createMetricRecord(() => 0);\n\treport.decline_coverage = createMetricRecord(() => true);\n\treport.iosm_index = calculateIosmIndex(analysis.metrics, config.iosm.index.weights);\n\treport.decision_confidence = calculateDecisionConfidence(analysis.metric_confidences, config.iosm.index.weights);\n\treport.incomplete =\n\t\t!hasCompleteNumericMetricRecord(report.metrics) ||\n\t\t!hasCompleteNumericMetricRecord(report.metric_confidences) ||\n\t\t!hasCompleteTierMetricRecord(report.metric_tiers) ||\n\t\treport.window.length === 0;\n\treport.decision = \"CONTINUE\";\n\treport.automation_actors = [\n\t\t...(report.automation_actors ?? []),\n\t\t{\n\t\t\ttype: \"agent\",\n\t\t\trole: \"analyzer\",\n\t\t\tidentity: \"iosm-init\",\n\t\t\tprovenance: \"repo-static-analysis\",\n\t\t},\n\t];\n\tconst scopeItems = countScopeItems(analysis.cycle_scope);\n\treport.cycle_capacity = {\n\t\tgoal_count: report.goals.length,\n\t\tscope_size: scopeItems,\n\t\texpected_change_surface: scopeItems > 0 ? scopeItems : Math.max(report.hypotheses.length, 1),\n\t\tpass:\n\t\t\treport.goals.length <= config.iosm.cycle_capacity.max_goals &&\n\t\t\tscopeItems <= config.iosm.cycle_capacity.max_scope_items &&\n\t\t\t(scopeItems > 0 ? scopeItems : Math.max(report.hypotheses.length, 1)) <=\n\t\t\t\tconfig.iosm.cycle_capacity.max_expected_change_surface,\n\t};\n\twriteJson(reportPath, report);\n}\n\nfunction getCycleArtifactPaths(rootDir: string, cycleId: string): string[] {\n\treturn [\n\t\tgetIosmBaselineReportPath(cycleId, rootDir),\n\t\tgetIosmHypothesesPath(cycleId, rootDir),\n\t\tgetIosmCycleReportPath(cycleId, rootDir),\n\t\t...IOSM_PHASES.map((phase) => getIosmPhaseReportPath(cycleId, phase, rootDir)),\n\t];\n}\n\nfunction shouldReuseCycleForInit(cycle: IosmCycleListItem | undefined): boolean {\n\tif (!cycle) {\n\t\treturn false;\n\t}\n\n\treturn cycle.decision === \"CONTINUE\" || cycle.decision === \"unknown\";\n}\n\nfunction planOrReuseCycle(\n\trootDir: string,\n\tforce: boolean,\n\tanalysis: IosmInitAnalysis,\n\tconfig: IosmConfig,\n\tresult: IosmInitResult,\n): InitialCycleSummary | undefined {\n\tlet existingCycles: IosmCycleListItem[] = [];\n\ttry {\n\t\texistingCycles = listIosmCycles(rootDir);\n\t} catch {\n\t\texistingCycles = [];\n\t}\n\n\tconst latestCycle = existingCycles[0];\n\tconst shouldReuse = shouldReuseCycleForInit(latestCycle);\n\tlet planned: PlannedIosmCycle | undefined;\n\tlet reusedExistingCycle = false;\n\tconst existedBeforePlan = new Map<string, boolean>();\n\n\tif (!shouldReuse) {\n\t\tplanned = planIosmCycle({\n\t\t\tcwd: rootDir,\n\t\t\tgoals: analysis.goals,\n\t\t\tforce,\n\t\t});\n\t} else if (force) {\n\t\treusedExistingCycle = true;\n\t\tconst cycleId = latestCycle.cycleId;\n\t\tfor (const artifactPath of getCycleArtifactPaths(rootDir, cycleId)) {\n\t\t\texistedBeforePlan.set(artifactPath, existsSync(artifactPath));\n\t\t}\n\t\tplanned = planIosmCycle({\n\t\t\tcwd: rootDir,\n\t\t\tcycleId,\n\t\t\tgoals: analysis.goals,\n\t\t\tforce: true,\n\t\t});\n\t} else {\n\t\tconst cycleId = latestCycle.cycleId;\n\t\treturn {\n\t\t\tcycleId,\n\t\t\tcycleDir: getIosmCycleDir(cycleId, rootDir),\n\t\t\treportPath: getIosmCycleReportPath(cycleId, rootDir),\n\t\t\tbaselineReportPath: getIosmBaselineReportPath(cycleId, rootDir),\n\t\t\thypothesesPath: getIosmHypothesesPath(cycleId, rootDir),\n\t\t\treusedExistingCycle: true,\n\t\t};\n\t}\n\n\tif (!planned) {\n\t\treturn undefined;\n\t}\n\n\tconst artifactPaths = getCycleArtifactPaths(rootDir, planned.cycleId);\n\tfor (const filePath of artifactPaths) {\n\t\tmarkPathByExistence(filePath, existedBeforePlan.get(filePath) ?? false, result);\n\t}\n\n\tseedCycleArtifactsFromAnalysis(rootDir, planned.cycleId, analysis, config);\n\n\treturn {\n\t\tcycleId: planned.cycleId,\n\t\tcycleDir: planned.cycleDir,\n\t\treportPath: planned.reportPath,\n\t\tbaselineReportPath: planned.baselineReportPath,\n\t\thypothesesPath: planned.hypothesesPath,\n\t\treusedExistingCycle,\n\t};\n}\n\nexport async function initIosmWorkspace(options: IosmInitOptions = {}): Promise<IosmInitResult> {\n\tconst rootDir = resolve(options.cwd ?? process.cwd());\n\tconst force = options.force ?? false;\n\n\tconst bootstrapAnalysis: IosmInitAnalysis = {\n\t\tgenerated_at: new Date().toISOString(),\n\t\tfiles_analyzed: 0,\n\t\tsource_file_count: 0,\n\t\ttest_file_count: 0,\n\t\tdoc_file_count: 0,\n\t\ttop_languages: [],\n\t\tcycle_scope: {\n\t\t\tmodules: [],\n\t\t\tservices: [],\n\t\t\tdomains: [],\n\t\t\tcontracts: [],\n\t\t\trationale: \"not analyzed\",\n\t\t},\n\t\tdetected_contracts: [],\n\t\tsource_systems: [],\n\t\tgoals: [\"Establish IOSM baseline metrics and define an initial cycle scope.\"],\n\t\traw_measurements: {},\n\t\tmetrics: createMetricRecord(() => null),\n\t\tmetric_confidences: createMetricRecord(() => 0.5),\n\t\tmetric_tiers: createMetricRecord(() => \"C\"),\n\t};\n\n\tconst result: IosmInitResult = {\n\t\trootDir,\n\t\tcreated: [],\n\t\toverwritten: [],\n\t\tskipped: [],\n\t\tanalysis: bootstrapAnalysis,\n\t};\n\n\tconst systemName = basename(rootDir);\n\n\tmkdirSync(rootDir, { recursive: true });\n\tmkdirSync(getIosmWorkspaceDir(rootDir), { recursive: true });\n\tmkdirSync(getIosmBaselinesDir(rootDir), { recursive: true });\n\tmkdirSync(getIosmCyclesDir(rootDir), { recursive: true });\n\n\twriteScaffoldFileWithExistenceCheck(getIosmConfigPath(rootDir), createIosmConfigTemplate(systemName), force, result);\n\n\tconst { config } = loadIosmConfig(rootDir);\n\tconst signals = await deriveProjectSignals(rootDir);\n\tconst analysis = deriveInitAnalysis(signals, config);\n\tresult.analysis = analysis;\n\n\tconst invariantsCatalog = createInvariantsCatalog(signals, analysis.generated_at);\n\tconst contractsCatalog = createContractCatalog(signals, analysis.generated_at);\n\tconst waiverRegister = createWaiverRegister(analysis.generated_at);\n\tconst decisionLog = createDecisionLog(systemName, analysis);\n\tconst patternLibrary = createPatternLibrary(analysis);\n\n\twriteScaffoldFileWithExistenceCheck(getIosmMetricsHistoryPath(rootDir), \"\", force, result);\n\twriteScaffoldFileWithExistenceCheck(\n\t\tgetIosmWaiverRegisterPath(rootDir),\n\t\tstringify(waiverRegister),\n\t\tforce,\n\t\tresult,\n\t);\n\twriteScaffoldFileWithExistenceCheck(\n\t\tgetIosmInvariantCatalogPath(rootDir),\n\t\tstringify(invariantsCatalog),\n\t\tforce,\n\t\tresult,\n\t);\n\twriteScaffoldFileWithExistenceCheck(\n\t\tgetIosmContractCatalogPath(rootDir),\n\t\tstringify(contractsCatalog),\n\t\tforce,\n\t\tresult,\n\t);\n\twriteScaffoldFileWithExistenceCheck(getIosmDecisionLogPath(rootDir), decisionLog, force, result);\n\twriteScaffoldFileWithExistenceCheck(getIosmPatternLibraryPath(rootDir), patternLibrary, force, result);\n\twriteScaffoldFileWithExistenceCheck(join(getIosmBaselinesDir(rootDir), \".gitkeep\"), \"\", force, result);\n\twriteScaffoldFileWithExistenceCheck(join(getIosmCyclesDir(rootDir), \".gitkeep\"), \"\", force, result);\n\n\tresult.cycle = planOrReuseCycle(rootDir, force, analysis, config, result);\n\tconst heuristicIndex = calculateIosmIndex(analysis.metrics, config.iosm.index.weights);\n\tconst heuristicConfidence = calculateDecisionConfidence(analysis.metric_confidences, config.iosm.index.weights);\n\tconst guideWrite = writeIosmGuideDocument(\n\t\t{\n\t\t\trootDir,\n\t\t\tcycleId: result.cycle?.cycleId,\n\t\t\tassessmentSource: \"heuristic\",\n\t\t\tmetrics: analysis.metrics,\n\t\t\tiosmIndex: heuristicIndex,\n\t\t\tdecisionConfidence: heuristicConfidence,\n\t\t\tgoals: analysis.goals,\n\t\t\tfilesAnalyzed: analysis.files_analyzed,\n\t\t\tsourceFileCount: analysis.source_file_count,\n\t\t\ttestFileCount: analysis.test_file_count,\n\t\t\tdocFileCount: analysis.doc_file_count,\n\t\t},\n\t\ttrue,\n\t);\n\tif (guideWrite.written) {\n\t\tmarkPathByExistence(guideWrite.path, guideWrite.existed, result);\n\t} else {\n\t\tpushUnique(result.skipped, guideWrite.path);\n\t}\n\n\tconst agentsWrite = writeAgentsGuideDocument(\n\t\t{\n\t\t\trootDir,\n\t\t\tcycleId: result.cycle?.cycleId,\n\t\t\tassessmentSource: \"heuristic\",\n\t\t\tiosmIndex: heuristicIndex,\n\t\t\tdecisionConfidence: heuristicConfidence,\n\t\t\tgoals: analysis.goals,\n\t\t\tfilesAnalyzed: analysis.files_analyzed,\n\t\t\tsourceFileCount: analysis.source_file_count,\n\t\t\ttestFileCount: analysis.test_file_count,\n\t\t\tdocFileCount: analysis.doc_file_count,\n\t\t},\n\t\ttrue,\n\t);\n\tif (agentsWrite.written) {\n\t\tmarkPathByExistence(agentsWrite.path, agentsWrite.existed, result);\n\t} else {\n\t\tpushUnique(result.skipped, agentsWrite.path);\n\t}\n\n\tif (result.cycle) {\n\t\ttry {\n\t\t\trecordIosmCycleHistory(rootDir, result.cycle.cycleId);\n\t\t} catch {\n\t\t\t// Keep init resilient even if history record cannot be persisted yet.\n\t\t}\n\t}\n\n\treturn result;\n}\n"]}

package/dist/main.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"main.d.ts","sourceRoot":"","sources":["../src/main.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AA2uDH,wBAAsB,IAAI,CAAC,IAAI,EAAE,MAAM,EAAE,iBAmUxC"}
+{"version":3,"file":"main.d.ts","sourceRoot":"","sources":["../src/main.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AA6vDH,wBAAsB,IAAI,CAAC,IAAI,EAAE,MAAM,EAAE,iBAmUxC"}

package/dist/main.js

@@ -692,7 +692,23 @@ async function handleIosmInitCommand(args) {
     }
     const targetDir = resolve(options.targetDir ?? process.cwd());
     const result = await initIosmWorkspace({ cwd: targetDir, force: options.force });
+    const fileState = (name) => {
+        const unixTail = `/${name}`;
+        const winTail = `\\${name}`;
+        const exactPath = resolve(targetDir, name);
+        if (result.created.some((path) => path === exactPath || path.endsWith(unixTail) || path.endsWith(winTail))) {
+            return "created";
+        }
+        if (result.overwritten.some((path) => path === exactPath || path.endsWith(unixTail) || path.endsWith(winTail))) {
+            return "updated";
+        }
+        if (result.skipped.some((path) => path === exactPath || path.endsWith(unixTail) || path.endsWith(winTail))) {
+            return "skipped";
+        }
+        return "unchanged";
+    };
     console.log(chalk.green(`Initialized IOSM workspace at ${result.rootDir}`));
+    console.log(chalk.dim(`AGENTS.md: ${fileState("AGENTS.md")} · IOSM.md: ${fileState("IOSM.md")}`));
     console.log(chalk.dim(`Analyzed ${result.analysis.files_analyzed} files (${result.analysis.source_file_count} source, ${result.analysis.test_file_count} tests, ${result.analysis.doc_file_count} docs)`));
     if (options.agentVerify) {
         console.log(chalk.dim("Initial heuristic baseline captured (internal)."));