intentdna 1.4.7 → 1.4.8

package/dist/cli/commands/feedback.d.ts

@@ -1,7 +1,8 @@
 /**
- * dna feedback [--days <N>] [--json]
+ * dna feedback [--days <N>] [--json] [--evolve]
  *
  * Analyze trace/audit data and produce actionable feedback for template optimization.
+ * With --evolve: convert trace data into epigenetic markers (preview by default).
  *
  * Reads: .dna/state/trace/trace-*.jsonl
  * Outputs: human-readable report (or JSON with --json)
@@ -9,6 +10,7 @@
 export interface FeedbackOptions {
     days: number;
     json: boolean;
+    evolve: boolean;
 }
 export interface FeedbackReport {
     period_days: number;

package/dist/cli/commands/feedback.js

@@ -1,12 +1,16 @@
 /**
- * dna feedback [--days <N>] [--json]
+ * dna feedback [--days <N>] [--json] [--evolve]
  *
  * Analyze trace/audit data and produce actionable feedback for template optimization.
+ * With --evolve: convert trace data into epigenetic markers (preview by default).
  *
  * Reads: .dna/state/trace/trace-*.jsonl
  * Outputs: human-readable report (or JSON with --json)
  */
 import { readTraces } from "../../hooks/state.js";
+import { traceToOutcomes, summarizeConversion } from "../../evolution/trace-bridge.js";
+import { describeMarkerChanges } from "../../evolution/marker-gen.js";
+import { EvolutionStore } from "../../evolution/store.js";
 function aggregate(traces) {
     let blocks = 0, warns = 0, allows = 0;
     const toolCounts = new Map();
@@ -130,11 +134,41 @@ export async function runFeedback(opts) {
     const stats = aggregate(traces);
     const suggestions = generateSuggestions(stats);
     const report = { ...stats, period_days: opts.days, suggestions };
-    if (opts.json) {
+    if (opts.json && !opts.evolve) {
         process.stdout.write(JSON.stringify(report, null, 2) + "\n");
     }
-    else {
+    else if (!opts.evolve) {
         process.stderr.write(formatReport(report));
     }
+    // --evolve: convert traces → epigenetic markers
+    if (opts.evolve) {
+        const outcomes = traceToOutcomes(traces);
+        if (outcomes.length === 0) {
+            process.stderr.write(formatReport(report));
+            process.stderr.write("\nNo actionable gene feedback found in traces — nothing to evolve.\n");
+            return 0;
+        }
+        const store = new EvolutionStore();
+        const existingMarkers = await store.loadMarkers("default");
+        const changes = describeMarkerChanges(outcomes, existingMarkers);
+        process.stderr.write(formatReport(report));
+        process.stderr.write("\n" + summarizeConversion(outcomes) + "\n\n");
+        process.stderr.write("Marker changes (preview):\n");
+        for (const c of changes) {
+            if (c.type === "create") {
+                process.stderr.write(`  + CREATE ${c.gene} → ${c.action} x${c.factor.toFixed(2)} (${c.feedback_count} feedbacks)\n`);
+            }
+            else if (c.type === "update") {
+                process.stderr.write(`  ~ UPDATE ${c.gene} → ${c.action} x${c.factor.toFixed(2)} (${c.feedback_count} feedbacks)\n`);
+            }
+            else if (c.type === "neutral") {
+                process.stderr.write(`  = NEUTRAL ${c.gene} x${c.factor.toFixed(2)} (${c.feedback_count} feedbacks)\n`);
+            }
+            else {
+                process.stderr.write(`  ? INSUFFICIENT ${c.gene} (${c.feedback_count}/${c.needed} needed)\n`);
+            }
+        }
+        process.stderr.write("\nRun `dna evolve --apply` to persist markers.\n");
+    }
     return 0;
 }

package/dist/cli/index.js

@@ -29,7 +29,7 @@ Commands:
   show          Show gene expression state
   evolve        Generate epigenetic markers from outcomes
   epigenetic    Record outcomes, view markers and summaries
-  feedback      Analyze trace data, suggest template optimizations (--days <N>, --json)
+  feedback      Analyze trace data, suggest template optimizations (--days <N>, --json, --evolve)
 
 Options:
   --help, -h    Show help for a command
@@ -412,6 +412,7 @@ async function main() {
                 options: {
                     days: { type: "string", short: "d", default: "7" },
                     json: { type: "boolean", default: false },
+                    evolve: { type: "boolean", default: false },
                 },
                 strict: false,
             });
@@ -419,6 +420,7 @@ async function main() {
             const code = await runFeedback({
                 days: parseInt(fbValues.days, 10) || 7,
                 json: fbValues.json,
+                evolve: fbValues.evolve,
             });
             process.exit(code);
             break;

package/dist/evolution/trace-bridge.d.ts

@@ -0,0 +1,31 @@
+/**
+ * Intent DNA — Trace-to-Evolution Bridge
+ *
+ * Converts hook trace data into ExecutionOutcomes that the epigenetic
+ * marker generator can process. This closes the feedback loop:
+ *   traces (observed behavior) → outcomes → markers → gene modulation
+ *
+ * Gene extraction from trace reasons:
+ *   - Tool filters: "(gene: <name>)" in reason
+ *   - Role scope: "Role '<name>'" → gene "scope:<role>"
+ *   - Gates: "(gene: <name>)" pattern or fallback to "gate"
+ */
+import type { TraceEntry } from "../hooks/state.js";
+import type { ExecutionOutcome } from "./types.js";
+/**
+ * Extract the gene name from a trace entry's reason string.
+ * Returns null if no gene can be determined.
+ */
+export declare function extractGeneFromReason(reason: string | undefined): string | null;
+/**
+ * Convert trace entries into ExecutionOutcomes for the evolution engine.
+ *
+ * Groups block/warn traces by gene, creates one outcome per unique
+ * (gene, decision) pair. Allow decisions are not converted since
+ * they don't carry gene information.
+ */
+export declare function traceToOutcomes(traces: TraceEntry[], dnaId?: string): ExecutionOutcome[];
+/**
+ * Summarize trace-to-outcome conversion for human review.
+ */
+export declare function summarizeConversion(outcomes: ExecutionOutcome[]): string;

package/dist/evolution/trace-bridge.js

@@ -0,0 +1,99 @@
+/**
+ * Intent DNA — Trace-to-Evolution Bridge
+ *
+ * Converts hook trace data into ExecutionOutcomes that the epigenetic
+ * marker generator can process. This closes the feedback loop:
+ *   traces (observed behavior) → outcomes → markers → gene modulation
+ *
+ * Gene extraction from trace reasons:
+ *   - Tool filters: "(gene: <name>)" in reason
+ *   - Role scope: "Role '<name>'" → gene "scope:<role>"
+ *   - Gates: "(gene: <name>)" pattern or fallback to "gate"
+ */
+import { randomUUID } from "node:crypto";
+/**
+ * Extract the gene name from a trace entry's reason string.
+ * Returns null if no gene can be determined.
+ */
+export function extractGeneFromReason(reason) {
+    if (!reason)
+        return null;
+    // Pattern: (gene: <name>) — from tool filters and gates
+    const geneMatch = reason.match(/\(gene:\s*(\w+)\)/);
+    if (geneMatch)
+        return geneMatch[1];
+    // Pattern: Role '<name>' — from scope enforcement
+    const roleMatch = reason.match(/Role '(\w+)'/);
+    if (roleMatch)
+        return `scope:${roleMatch[1]}`;
+    // Pattern: source_gene in gate messages
+    const sourceMatch = reason.match(/source_gene:\s*(\w+)/);
+    if (sourceMatch)
+        return sourceMatch[1];
+    return null;
+}
+/**
+ * Convert trace entries into ExecutionOutcomes for the evolution engine.
+ *
+ * Groups block/warn traces by gene, creates one outcome per unique
+ * (gene, decision) pair. Allow decisions are not converted since
+ * they don't carry gene information.
+ */
+export function traceToOutcomes(traces, dnaId = "default") {
+    // Collect feedback per gene from block/warn traces
+    const geneFeedback = new Map();
+    for (const trace of traces) {
+        if (trace.decision === "allow")
+            continue;
+        const gene = extractGeneFromReason(trace.reason);
+        if (!gene)
+            continue;
+        const existing = geneFeedback.get(gene) ?? { hindered: 0, details: [] };
+        existing.hindered++;
+        if (trace.reason && existing.details.length < 3) {
+            const short = trace.reason.split("\n")[0].slice(0, 80);
+            existing.details.push(short);
+        }
+        geneFeedback.set(gene, existing);
+    }
+    // Convert to ExecutionOutcomes
+    const outcomes = [];
+    const totalEvents = traces.length;
+    const timestamp = new Date().toISOString();
+    for (const [gene, stats] of geneFeedback) {
+        const feedback = [];
+        // Each block counts as a "hindered" feedback
+        for (let i = 0; i < stats.hindered; i++) {
+            feedback.push({
+                gene,
+                effect: "hindered",
+                detail: stats.details[i] ?? `blocked ${stats.hindered} times`,
+            });
+        }
+        outcomes.push({
+            id: `trace_${randomUUID().slice(0, 8)}`,
+            timestamp,
+            dna_id: dnaId,
+            action: `enforcement: ${gene} blocked ${stats.hindered}/${totalEvents} events`,
+            active_genes: [gene],
+            constraints_applied: [gene],
+            success: false, // Blocks indicate friction
+            constraint_feedback: feedback,
+        });
+    }
+    return outcomes;
+}
+/**
+ * Summarize trace-to-outcome conversion for human review.
+ */
+export function summarizeConversion(outcomes) {
+    if (outcomes.length === 0)
+        return "No actionable gene feedback found in traces.";
+    const lines = ["Trace → Epigenetic conversion:"];
+    for (const o of outcomes) {
+        const gene = o.active_genes[0];
+        const count = o.constraint_feedback.length;
+        lines.push(`  ${gene}: ${count} block${count > 1 ? "s" : ""} → will suppress`);
+    }
+    return lines.join("\n");
+}

package/dist/hooks/cli.js

@@ -18,7 +18,7 @@ import { readFile, stat } from "node:fs/promises";
 import { resolve } from "node:path";
 import { randomUUID } from "node:crypto";
 import { readStdin, writeOutput, silentOutput, allowOutput } from "./protocol.js";
-import { enforcePreToolUse, enforcePostToolUse, enforceUserPromptSubmit, enforceSubagentStop, enforcePreCompact, enforceNotification, enforceSessionStart, enforceStop, } from "./enforce.js";
+import { enforcePreToolUse, enforcePostToolUse, enforceUserPromptSubmit, enforceSubagentStop, enforcePreCompact, enforceNotification, enforceSessionStart, enforceStop, extractBashWritePaths, } from "./enforce.js";
 import { appendAudit, readWorkflowState, appendTrace, rotateTraces, readTraces } from "./state.js";
 // ── Constants ──────────────────────────────────────────────
 const DEFAULT_IR_PATH = ".dna/compiled/ir.json";
@@ -92,18 +92,21 @@ async function main() {
         return;
     }
     const state = {};
-    // Load workflow state for events that need handoff context
-    if (event === "PreToolUse") {
+    // Load workflow state for events that need it (handoff context + PreCompact preservation)
+    if (event === "PreToolUse" || event === "PreCompact") {
         const wfState = await readWorkflowState(projectDir, sessionId);
         if (wfState && wfState.active) {
             state.workflowState = {
                 current_step: wfState.current_step,
                 workflow: wfState.workflow,
+                current_role: wfState.current_role,
                 completed_artifacts: wfState.completed_artifacts,
             };
             // Re-run fallback: scan consumed artifact paths on disk so
             // enforceHandoffConsumes can skip blocks for files that already exist.
-            state.existingArtifactPaths = await scanConsumedArtifactPaths(projectDir, ir, wfState.workflow, wfState.current_step);
+            if (event === "PreToolUse") {
+                state.existingArtifactPaths = await scanConsumedArtifactPaths(projectDir, ir, wfState.workflow, wfState.current_step);
+            }
         }
     }
     // Special handling for Stop — needs async workflow state read + session summary
@@ -154,17 +157,37 @@ async function main() {
     }
     // Dispatch to enforcement engine with timing
     const start = Date.now();
-    const output = dispatch(event, ir, rawInput, state);
+    let output = dispatch(event, ir, rawInput, state);
     const durationMs = Date.now() - start;
+    // Extract target file path for trace + pattern detection
+    const toolInput = typeof rawInput.tool_input === "object" && rawInput.tool_input !== null
+        ? rawInput.tool_input : undefined;
+    let targetPath = typeof toolInput?.file_path === "string" ? toolInput.file_path : undefined;
+    if (!targetPath && typeof toolInput?.command === "string") {
+        const bashPaths = extractBashWritePaths(toolInput.command);
+        if (bashPaths.length > 0)
+            targetPath = bashPaths[0];
+    }
+    // O4: Block pattern recognition — suggest scope expansion on repeated blocks
+    if (event === "PreToolUse" && output.continue === false && targetPath) {
+        try {
+            const traces = await readTraces(projectDir, 1);
+            const blockCount = traces.filter(t => t.decision === "block" && t.target_path === targetPath).length;
+            if (blockCount >= 2) {
+                output = {
+                    ...output,
+                    reason: (output.reason ?? "") +
+                        `\n\n[Intent DNA] Pattern detected: '${targetPath}' blocked ${blockCount + 1} times this session. Consider expanding the role's write scope.`,
+                };
+            }
+        }
+        catch { /* fail-open: pattern detection never blocks */ }
+    }
     writeOutput(output);
     // Trace logging (async, fail-open)
     const decision = output.continue === false ? "block"
         : output.hookSpecificOutput?.additionalContext?.startsWith("WARN") ? "warn"
             : "allow";
-    // Extract target file path from tool_input (Write/Edit/Read)
-    const toolInput = typeof rawInput.tool_input === "object" && rawInput.tool_input !== null
-        ? rawInput.tool_input : undefined;
-    const targetPath = typeof toolInput?.file_path === "string" ? toolInput.file_path : undefined;
     appendTrace(projectDir, {
         trace_id: randomUUID(),
         event,
@@ -221,7 +244,11 @@ function dispatch(event, ir, input, state) {
                 agent_type: typeof input.agent_type === "string" ? input.agent_type : undefined,
             });
         case "PreCompact":
-            return enforcePreCompact(ir);
+            return enforcePreCompact(ir, state.workflowState ? {
+                workflow: state.workflowState.workflow,
+                current_step: state.workflowState.current_step,
+                current_role: state.workflowState.current_role ?? "",
+            } : null);
         case "Notification":
             return enforceNotification(ir, {
                 title: typeof input.title === "string" ? input.title : undefined,

package/dist/hooks/enforce.d.ts

@@ -26,6 +26,7 @@ export interface EnforceState {
     workflowState?: {
         current_step: string;
         workflow: string;
+        current_role?: string;
         completed_artifacts?: CompletedArtifactEntry[];
     };
     /** Artifact paths that exist on disk — fallback for re-run idempotency.
@@ -41,7 +42,8 @@ export interface EnforceState {
 export declare function enforcePreToolUse(ir: ConstraintIR, input: PreToolUseInput, state?: EnforceState, roles?: Record<string, RoleDef>): HookOutput;
 /**
  * Enforce PostToolUse validators.
- * Currently logs validators for audit. Returns allow with context.
+ * 1. Runs post-execution validators (audit)
+ * 2. Verifies Bash write paths were within scope (defense-in-depth)
  */
 export declare function enforcePostToolUse(ir: ConstraintIR, input: PostToolUseInput): HookOutput;
 /**
@@ -55,8 +57,13 @@ export declare function enforceUserPromptSubmit(ir: ConstraintIR, _input: UserPr
 export declare function enforceSubagentStop(ir: ConstraintIR, input: SubagentStopInput): HookOutput;
 /**
  * Preserve DNA directive summary before context compaction.
+ * Includes: high-priority directives, role scope map, active workflow state.
  */
-export declare function enforcePreCompact(ir: ConstraintIR): HookOutput;
+export declare function enforcePreCompact(ir: ConstraintIR, workflowContext?: {
+    workflow: string;
+    current_step: string;
+    current_role: string;
+} | null): HookOutput;
 /**
  * Check if a notification is a DNA violation and return audit info.
  * The CLI handles actual audit file writes.
@@ -124,3 +131,9 @@ export declare function evaluateGateCondition(condition: string, input: PreToolU
  * Resolve a tool filter target to concrete Claude Code tool names.
  */
 export declare function resolveToolTarget(target?: string): string[] | null;
+/**
+ * Extract file paths that a Bash command writes to.
+ * Detects: output redirection (> / >>), tee, cp, mv.
+ * Returns deduplicated list of target paths.
+ */
+export declare function extractBashWritePaths(command: string): string[];

package/dist/hooks/enforce.js

@@ -14,7 +14,7 @@
  * Step checkpoints are handled by the CLI, not here.
  */
 import { allowOutput, blockOutput, escalateOutput, silentOutput } from "./protocol.js";
-import { relative } from "node:path";
+import { relative, normalize } from "node:path";
 // ── PreToolUse Enforcement ─────────────────────────────────
 /**
  * Enforce PreToolUse constraints.
@@ -58,16 +58,31 @@ export function enforcePreToolUse(ir, input, state, roles) {
 // ── PostToolUse Enforcement ────────────────────────────────
 /**
  * Enforce PostToolUse validators.
- * Currently logs validators for audit. Returns allow with context.
+ * 1. Runs post-execution validators (audit)
+ * 2. Verifies Bash write paths were within scope (defense-in-depth)
  */
 export function enforcePostToolUse(ir, input) {
-    const validators = ir.post_execution_validators;
-    if (validators.length === 0)
-        return silentOutput();
     const lines = [];
+    // Layer 1: Post-execution validators
+    const validators = ir.post_execution_validators;
     for (const v of validators) {
         lines.push(`[Intent DNA] PostToolUse validator: ${v.check} (gene: ${v.source_gene})`);
     }
+    // Layer 2: Bash write scope verification (defense-in-depth)
+    if (input.tool_name === "Bash" && input.agent_type && ir.roles_scope_map && ir.roles_scope_map.length > 0) {
+        const cmd = input.tool_input.command;
+        if (typeof cmd === "string") {
+            const writePaths = extractBashWritePaths(cmd);
+            if (writePaths.length > 0) {
+                const violations = verifyPathsAgainstScope(ir.roles_scope_map, input.agent_type, writePaths, input.cwd);
+                for (const v of violations) {
+                    lines.push(`WARN [Intent DNA] PostToolUse: Bash wrote outside scope — ${v}`);
+                }
+            }
+        }
+    }
+    if (lines.length === 0)
+        return silentOutput();
     return allowOutput(lines.join("\n"));
 }
 // ── UserPromptSubmit Enforcement ───────────────────────────
@@ -113,14 +128,18 @@ export function enforceSubagentStop(ir, input) {
 // ── PreCompact Enforcement ─────────────────────────────────
 /**
  * Preserve DNA directive summary before context compaction.
+ * Includes: high-priority directives, role scope map, active workflow state.
  */
-export function enforcePreCompact(ir) {
-    if (ir.prompt_directives.length === 0)
+export function enforcePreCompact(ir, workflowContext) {
+    const hasDirectives = ir.prompt_directives.length > 0;
+    const hasRoles = ir.roles_scope_map && ir.roles_scope_map.length > 0;
+    const hasWorkflow = !!workflowContext;
+    if (!hasDirectives && !hasRoles && !hasWorkflow)
         return silentOutput();
     const critical = ir.prompt_directives.filter(d => d.priority === "high");
     const standard = ir.prompt_directives.filter(d => d.priority === "medium");
     const lines = [
-        "[Intent DNA] PreCompact: Preserving directive summary for compact",
+        "[Intent DNA] PreCompact: Preserving governance context for compact",
     ];
     if (critical.length > 0) {
         lines.push("  Critical directives:");
@@ -134,6 +153,19 @@ export function enforcePreCompact(ir) {
             lines.push(`    - [${d.source_gene}] ${d.text}`);
         }
     }
+    // Preserve role scope map so agent knows its boundaries post-compact
+    if (hasRoles) {
+        lines.push("  Active role scopes:");
+        for (const entry of ir.roles_scope_map) {
+            const writeGlobs = entry.scope.write ?? [];
+            const readGlobs = entry.scope.read ?? [];
+            lines.push(`    - ${entry.role_name}: write=[${writeGlobs.join(",")}] read=[${readGlobs.join(",")}]`);
+        }
+    }
+    // Preserve workflow state so agent retains step context
+    if (hasWorkflow) {
+        lines.push(`  Active workflow: ${workflowContext.workflow} (step: ${workflowContext.current_step}, role: ${workflowContext.current_role})`);
+    }
     return allowOutput(lines.join("\n"));
 }
 // ── Notification Enforcement ───────────────────────────────
@@ -315,14 +347,36 @@ export function enforceHandoffProduces(ir, wfState) {
 function enforceRoleScope(rolesScopeMap, input) {
     if (!input.agent_type)
         return null;
-    if (!isWriteTool(input.tool_name))
-        return null;
-    const filePath = extractFilePath(input);
-    if (!filePath)
+    // Standard write tools: check single file path
+    if (isWriteTool(input.tool_name)) {
+        const filePath = extractFilePath(input);
+        if (!filePath)
+            return null;
+        return checkPathAgainstScope(rolesScopeMap, input, filePath);
+    }
+    // Bash: extract potential write targets from command
+    if (input.tool_name === "Bash") {
+        const cmd = input.tool_input.command;
+        if (typeof cmd !== "string")
+            return null;
+        const writePaths = extractBashWritePaths(cmd);
+        if (writePaths.length === 0)
+            return null;
+        for (const p of writePaths) {
+            const result = checkPathAgainstScope(rolesScopeMap, input, p);
+            if (result)
+                return result;
+        }
         return null;
-    // Convert absolute path to relative for glob matching
+    }
+    return null;
+}
+/** Check a single file path against role scope. Shared by Write tools and Bash. */
+function checkPathAgainstScope(rolesScopeMap, input, filePath) {
     const cwd = input.cwd;
-    const relativePath = cwd && filePath.startsWith("/") ? relative(cwd, filePath) : filePath;
+    let relativePath = cwd && filePath.startsWith("/") ? relative(cwd, filePath) : filePath;
+    // Normalize to resolve traversal (e.g., "src/../../test/x.ts" → "../test/x.ts")
+    relativePath = normalize(relativePath);
     for (const entry of rolesScopeMap) {
         const agentTypeName = `dna-${toKebabCase(entry.role_name)}`;
         if (input.agent_type !== agentTypeName)
@@ -338,6 +392,27 @@ function enforceRoleScope(rolesScopeMap, input) {
     }
     return null; // No matching role — allow
 }
+/**
+ * Verify a list of paths against role scope. Returns violation messages.
+ * Used by PostToolUse for defense-in-depth auditing (warn, not block).
+ */
+function verifyPathsAgainstScope(rolesScopeMap, agentType, paths, cwd) {
+    const violations = [];
+    for (const entry of rolesScopeMap) {
+        const agentTypeName = `dna-${toKebabCase(entry.role_name)}`;
+        if (agentType !== agentTypeName)
+            continue;
+        const writeGlobs = entry.scope.write ?? [];
+        for (const p of paths) {
+            const relativePath = cwd && p.startsWith("/") ? relative(cwd, p) : p;
+            if (writeGlobs.length === 0 || !checkWriteAllowed(relativePath, writeGlobs)) {
+                violations.push(`role '${entry.role_name}' wrote to '${p}' (allowed: ${writeGlobs.join(", ") || "none"})`);
+            }
+        }
+        break; // Found the role, done
+    }
+    return violations;
+}
 function enforceToolFilters(filters, input) {
     for (const filter of filters) {
         const matchedTools = resolveToolTarget(filter.target);
@@ -486,12 +561,67 @@ function extractFilePath(input) {
     const fp = input.tool_input.file_path;
     if (typeof fp === "string" && fp)
         return fp;
-    // Bash tool — try to extract from command
-    const cmd = input.tool_input.command;
-    if (typeof cmd === "string")
-        return null; // Can't reliably extract
     return null;
 }
+/**
+ * Extract file paths that a Bash command writes to.
+ * Detects: output redirection (> / >>), tee, cp, mv.
+ * Returns deduplicated list of target paths.
+ */
+export function extractBashWritePaths(command) {
+    const paths = [];
+    // 1. Output redirection: > or >>
+    //    Skip fd duplication (>&N, >&-), /dev/ paths, and variable expansions
+    const redirectRegex = />{1,2}\s*(?!&)(?:"([^"]+)"|'([^']+)'|([^\s;|&><()`$]+))/g;
+    let match;
+    while ((match = redirectRegex.exec(command)) !== null) {
+        const p = match[1] ?? match[2] ?? match[3];
+        if (p && !p.startsWith("/dev/"))
+            paths.push(p);
+    }
+    // 2. tee command: writes stdin to file(s)
+    //    tee [-ai] file1 [file2 ...]
+    const teeMatch = command.match(/\btee\s+(.*?)(?:[;|&]|$)/);
+    if (teeMatch) {
+        const teeArgs = teeMatch[1].trim().split(/\s+/);
+        for (const arg of teeArgs) {
+            if (arg.startsWith("-"))
+                continue;
+            if (arg.startsWith("/dev/"))
+                continue;
+            if (arg.startsWith("$"))
+                continue;
+            // Handle quoted paths
+            const cleaned = arg.replace(/^["']|["']$/g, "");
+            if (cleaned)
+                paths.push(cleaned);
+        }
+    }
+    // 3. cp/mv destination: last non-flag argument
+    const cpMvMatch = command.match(/\b(cp|mv)\s+(.*?)(?:[;|&]|$)/);
+    if (cpMvMatch) {
+        const args = cpMvMatch[2].trim().split(/\s+/).filter(a => !a.startsWith("-"));
+        if (args.length >= 2) {
+            const dest = args[args.length - 1].replace(/^["']|["']$/g, "");
+            if (dest && !dest.startsWith("/dev/") && !dest.startsWith("$")) {
+                paths.push(dest);
+            }
+        }
+    }
+    // 4. sed -i: in-place file editing — the target file is the last argument
+    const sedInPlace = command.match(/\bsed\s+[^;|&]*?-i/);
+    if (sedInPlace) {
+        const sedFull = command.match(/\bsed\s+(.*?)(?:\s*[;|&]|$)/);
+        if (sedFull) {
+            const tokens = sedFull[1].trim().split(/\s+/);
+            const lastToken = tokens[tokens.length - 1]?.replace(/^["']|["']$/g, "");
+            if (lastToken && !lastToken.startsWith("/dev/") && !lastToken.startsWith("$") && !lastToken.startsWith("-")) {
+                paths.push(lastToken);
+            }
+        }
+    }
+    return [...new Set(paths)];
+}
 /** Convert string to kebab-case (matches agent-md.ts toKebabCase). */
 function toKebabCase(s) {
     return s

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "intentdna",
-  "version": "1.4.7",
+  "version": "1.4.8",
   "description": "Intent DNA — Declarative policy layer for AI agent behavior",
   "type": "module",
   "main": "dist/index.js",