igv 2.15.4 → 2.15.6

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package/dist/igv.js CHANGED
@@ -18700,13 +18700,6 @@
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  }
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  const range = options.range;
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- // const isChrome = navigator.userAgent.indexOf('Chrome') > -1
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- // const isSafari = navigator.vendor.indexOf("Apple") === 0 && /\sSafari\//.test(navigator.userAgent)
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- // if (range && isChrome && !isAmazonV4Signed(url) && !isGoogleStorageSigned(url)) {
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- // // Hack to prevent caching for byte-ranges. Attempt to fix net:err-cache errors in Chrome
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- // url += url.includes("?") ? "&" : "?"
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- // url += "someRandomSeed=" + Math.random().toString(36)
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- // }
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  const xhr = new XMLHttpRequest();
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  const sendData = options.sendData || options.body;
@@ -18780,6 +18773,7 @@
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  }
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  };
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+
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  xhr.onerror = function (event) {
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  if (isGoogleURL(url) && !options.retries) {
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  tryGoogleAuth();
@@ -18911,7 +18905,6 @@
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  }
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-
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  /**
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  * Return a Google oAuth token, triggering a sign in if required. This method should not be called until we know
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  * a token is required, that is until we've tried the url and received a 401, 403, or 404.
@@ -19070,6 +19063,7 @@
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  }
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  }
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+
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  const igvxhr = new IGVXhr();
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  /*
@@ -23950,7 +23944,7 @@
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  }
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  };
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- const _version = "2.15.4";
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+ const _version = "2.15.6";
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  function version() {
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  return _version
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  }
@@ -30285,7 +30279,8 @@
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  this.config = config || {};
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  this.genome = genome;
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  this.indexURL = config.indexURL;
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- this.indexed = config.indexed;
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+ this.indexed = config.indexed || this.indexURL !== undefined;
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+ this.queryable = this.indexed;
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  if (isFile(this.config.url)) {
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  this.filename = this.config.url.name;
@@ -31945,7 +31940,7 @@
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  const queryableFormats = new Set(["bigwig", "bw", "bigbed", "bb", "biginteract", "biggenepred", "bignarrowpeak", "tdf"]);
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- this.queryable = config.queryable === true; // False by default, unless explicitly set
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+ this.queryable = config.indexURL || config.queryable === true; // False by default, unless explicitly set
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  if (config.reader) {
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  // Explicit reader implementation
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  this.reader = config.reader;
@@ -32043,6 +32038,7 @@
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  // * view is "whole genome" but no features are loaded
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  // * cache is disabled
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  // * cache does not contain requested range
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+ // const containsRange = this.featureCache.containsRange(new GenomicInterval(queryChr, start, end))
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  if ((isWholeGenome && !this.wgFeatures && this.supportsWholeGenome()) ||
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  this.config.disableCache ||
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  !this.featureCache ||
@@ -40883,7 +40879,7 @@
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  function onDragEnd() {
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  if (track.trackView && track.displayMode !== "SQUISHED") {
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- track.trackView.repaintViews(); // TODO -- refine this to the viewport that was dragged after DOM refactor
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+ track.trackView.updateViews(); // TODO -- refine this to the viewport that was dragged after DOM refactor
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  }
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  }
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