higlass 2.3.1 → 2.3.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/app/scripts/BarTrack.js +6 -5
- package/app/scripts/Tiled1DPixiTrack.js +6 -2
- package/app/scripts/data-fetchers/DataFetcher.js +2 -1
- package/app/scripts/services/tile-proxy.js +5 -1
- package/dist/hglib.js +9 -7
- package/dist/hglib.min.js +4 -4
- package/dist/higlass.mjs +9 -7
- package/dist/package.json +11 -3
- package/package.json +11 -3
package/dist/higlass.mjs
CHANGED
|
@@ -12588,7 +12588,7 @@ const getXylofon = () => (
|
|
|
12588
12588
|
/** @type {const} */
|
|
12589
12589
|
[window, map$4((c) => c.charCodeAt(0))(
|
|
12590
12590
|
// @ts-expect-error - A global added by `vite.config.js`.
|
|
12591
|
-
"2.3.
|
|
12591
|
+
"2.3.2"
|
|
12592
12592
|
).map((number3) => number3 <= 999 ? `00${number3}`.slice(-3) : number3).join("")]
|
|
12593
12593
|
);
|
|
12594
12594
|
const gradient = (steps, width = 1, height = 100, fromX = 0, fromY = 0, toX = 0, toY = 100) => {
|
|
@@ -49020,7 +49020,8 @@ function calculateTileAndPosInTile(tilesetInfo, maxDim, dataStartPos, zoomLevel,
|
|
|
49020
49020
|
let tileWidth = null;
|
|
49021
49021
|
const pixelsPerTile = isLegacyTilesetInfo(tilesetInfo) ? tilesetInfo.bins_per_dimension ?? 256 : 256;
|
|
49022
49022
|
if (!isLegacyTilesetInfo(tilesetInfo)) {
|
|
49023
|
-
|
|
49023
|
+
const sortedResolutions = tilesetInfo.resolutions.map((x) => +x).sort((a, b) => b - a);
|
|
49024
|
+
tileWidth = sortedResolutions[zoomLevel] * pixelsPerTile;
|
|
49024
49025
|
} else {
|
|
49025
49026
|
tileWidth = maxDim / 2 ** zoomLevel;
|
|
49026
49027
|
}
|
|
@@ -78843,8 +78844,8 @@ let Tiled1DPixiTrack = /* @__PURE__ */ (function(_TiledPixiTrack) {
|
|
|
78843
78844
|
const {
|
|
78844
78845
|
tileX,
|
|
78845
78846
|
tileWidth
|
|
78846
|
-
} = this.getTilePosAndDimensions(tile.tileData.zoomLevel, tile.tileData.tilePos, this.tilesetInfo.bins_per_dimension || this.tilesetInfo.tile_size);
|
|
78847
|
-
const tileXScale = linear().domain([0, this.tilesetInfo.tile_size || this.tilesetInfo.bins_per_dimension]).range([tileX, tileX + tileWidth]);
|
|
78847
|
+
} = this.getTilePosAndDimensions(tile.tileData.zoomLevel, tile.tileData.tilePos, this.tilesetInfo.bins_per_dimension || this.tilesetInfo.tile_size || tile.tileData.dense.length);
|
|
78848
|
+
const tileXScale = linear().domain([0, this.tilesetInfo.tile_size || this.tilesetInfo.bins_per_dimension || tile.tileData.dense.length]).range([tileX, tileX + tileWidth]);
|
|
78848
78849
|
const start2 = Math.max(0, Math.round(tileXScale.invert(this._xScale.invert(visible[0]))));
|
|
78849
78850
|
const end2 = Math.min(tile.tileData.dense.length, Math.round(tileXScale.invert(this._xScale.invert(visible[1]))));
|
|
78850
78851
|
return [start2, end2];
|
|
@@ -83299,11 +83300,12 @@ let BarTrack = /* @__PURE__ */ (function(_HorizontalLine1DPixi) {
|
|
|
83299
83300
|
const {
|
|
83300
83301
|
graphics
|
|
83301
83302
|
} = tile;
|
|
83303
|
+
const numBins = this.tilesetInfo.tile_size || this.tilesetInfo.bins_per_dimension || tile.tileData.dense.length;
|
|
83302
83304
|
tile.svgData = void 0;
|
|
83303
83305
|
const {
|
|
83304
83306
|
tileX,
|
|
83305
83307
|
tileWidth
|
|
83306
|
-
} = this.getTilePosAndDimensions(tile.tileData.zoomLevel, tile.tileData.tilePos,
|
|
83308
|
+
} = this.getTilePosAndDimensions(tile.tileData.zoomLevel, tile.tileData.tilePos, numBins);
|
|
83307
83309
|
const tileValues = tile.tileData.dense;
|
|
83308
83310
|
if (tileValues.length === 0) return;
|
|
83309
83311
|
const [valueScale, pseudocount] = this.makeValueScale(this.minValue(), this.medianVisibleValue, this.maxValue(), 0);
|
|
@@ -83319,7 +83321,7 @@ let BarTrack = /* @__PURE__ */ (function(_HorizontalLine1DPixi) {
|
|
|
83319
83321
|
return;
|
|
83320
83322
|
}
|
|
83321
83323
|
const stroke = colorToHex(this.options.lineStrokeColor || "blue");
|
|
83322
|
-
const tileXScale = linear().domain([0,
|
|
83324
|
+
const tileXScale = linear().domain([0, numBins]).range([tileX, tileX + tileWidth]);
|
|
83323
83325
|
const strokeWidth = 0;
|
|
83324
83326
|
graphics.lineStyle(strokeWidth, stroke, 1);
|
|
83325
83327
|
const color2 = this.options.barFillColor || "grey";
|
|
@@ -93769,7 +93771,7 @@ Object.assign(LruCache.prototype, {
|
|
|
93769
93771
|
toJSON,
|
|
93770
93772
|
toString: toString2
|
|
93771
93773
|
});
|
|
93772
|
-
const version = "2.3.
|
|
93774
|
+
const version = "2.3.2";
|
|
93773
93775
|
const configs = {
|
|
93774
93776
|
..._configs,
|
|
93775
93777
|
IS_TRACK_RANGE_SELECTABLE,
|
package/dist/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "higlass",
|
|
3
|
-
"version": "2.3.
|
|
3
|
+
"version": "2.3.2",
|
|
4
4
|
"description": "HiGlass Hi-C / genomic / large data viewer",
|
|
5
5
|
"author": "Peter Kerpedjiev <pkerpedjiev@gmail.com>",
|
|
6
6
|
"main": "dist/hglib.js",
|
|
@@ -15,8 +15,16 @@
|
|
|
15
15
|
},
|
|
16
16
|
"./dist/*": "./dist/*"
|
|
17
17
|
},
|
|
18
|
-
"files": [
|
|
19
|
-
|
|
18
|
+
"files": [
|
|
19
|
+
"app",
|
|
20
|
+
"dist"
|
|
21
|
+
],
|
|
22
|
+
"keywords": [
|
|
23
|
+
"hi-c",
|
|
24
|
+
"genomics",
|
|
25
|
+
"matrix",
|
|
26
|
+
"tracks"
|
|
27
|
+
],
|
|
20
28
|
"scripts": {
|
|
21
29
|
"start": "vite",
|
|
22
30
|
"build": "tsc -p tsconfig.emit.json && node ./scripts/build.mjs",
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "higlass",
|
|
3
|
-
"version": "2.3.
|
|
3
|
+
"version": "2.3.2",
|
|
4
4
|
"description": "HiGlass Hi-C / genomic / large data viewer",
|
|
5
5
|
"author": "Peter Kerpedjiev <pkerpedjiev@gmail.com>",
|
|
6
6
|
"main": "dist/hglib.js",
|
|
@@ -15,8 +15,16 @@
|
|
|
15
15
|
},
|
|
16
16
|
"./dist/*": "./dist/*"
|
|
17
17
|
},
|
|
18
|
-
"files": [
|
|
19
|
-
|
|
18
|
+
"files": [
|
|
19
|
+
"app",
|
|
20
|
+
"dist"
|
|
21
|
+
],
|
|
22
|
+
"keywords": [
|
|
23
|
+
"hi-c",
|
|
24
|
+
"genomics",
|
|
25
|
+
"matrix",
|
|
26
|
+
"tracks"
|
|
27
|
+
],
|
|
20
28
|
"scripts": {
|
|
21
29
|
"start": "vite",
|
|
22
30
|
"build": "tsc -p tsconfig.emit.json && node ./scripts/build.mjs",
|