hex-audit 0.4.4 → 0.4.5

package/dashboard/app/overleaf/OverleafClient.tsx

@@ -0,0 +1,97 @@
+'use client';
+
+import { useState } from 'react';
+
+export interface OverleafSections {
+  executive_summary: string | null;
+  audited_files: string | null;
+  summary_of_findings: string | null;
+  findings: string | null;
+}
+
+type SectionKey = keyof OverleafSections;
+
+const TABS: Array<{ key: SectionKey; label: string; file: string }> = [
+  { key: 'executive_summary', label: 'Executive Summary', file: 'executive_summary.txt' },
+  { key: 'audited_files', label: 'Audited Files', file: 'audited_files.txt' },
+  { key: 'summary_of_findings', label: 'Summary of Issues', file: 'summary_of_findings.txt' },
+  { key: 'findings', label: 'Issues', file: 'findings.txt' },
+];
+
+export function OverleafClient({ sections }: { sections: OverleafSections }) {
+  const [active, setActive] = useState<SectionKey>('executive_summary');
+  const [copied, setCopied] = useState(false);
+
+  const content = sections[active];
+
+  const copy = async () => {
+    if (!content) return;
+    try {
+      await navigator.clipboard.writeText(content);
+      setCopied(true);
+      setTimeout(() => setCopied(false), 1500);
+    } catch {
+      /* clipboard blocked (insecure context) — no-op */
+    }
+  };
+
+  return (
+    <div>
+      <header className="mb-6">
+        <h1 className="text-title font-semibold text-text-primary">Overleaf</h1>
+        <p className="mt-1 text-body text-text-secondary">
+          LaTeX report sections from <span className="font-mono text-caption">.hex/overleaf/</span>.
+          Copy each into the matching slot of the Nethermind Overleaf template.
+        </p>
+      </header>
+
+      {/* Segmented control */}
+      <div className="mb-4 flex flex-wrap gap-1.5">
+        {TABS.map((tab) => {
+          const isActive = tab.key === active;
+          const present = Boolean(sections[tab.key]);
+          return (
+            <button
+              key={tab.key}
+              type="button"
+              onClick={() => setActive(tab.key)}
+              className={`rounded-md px-3 py-1.5 text-caption font-medium ${
+                isActive
+                  ? 'bg-accent text-surface-0'
+                  : 'bg-surface-2 text-text-secondary hover:text-text-primary'
+              } ${present ? '' : 'opacity-50'}`}
+            >
+              {tab.label}
+            </button>
+          );
+        })}
+      </div>
+
+      <div className="rounded-lg border border-border-subtle bg-surface-1">
+        <div className="flex items-center justify-between border-b border-border-subtle px-4 py-2.5">
+          <span className="font-mono text-caption text-text-tertiary">
+            {TABS.find((t) => t.key === active)?.file}
+          </span>
+          <button
+            type="button"
+            onClick={copy}
+            disabled={!content}
+            className="rounded-md border border-border-default px-2.5 py-1 text-caption text-text-secondary hover:bg-surface-2 hover:text-text-primary disabled:opacity-50"
+          >
+            {copied ? 'Copied!' : 'Copy'}
+          </button>
+        </div>
+        {content ? (
+          <pre className="max-h-[70vh] overflow-auto p-4 font-mono text-caption leading-relaxed text-text-secondary whitespace-pre-wrap break-words">
+            {content}
+          </pre>
+        ) : (
+          <p className="p-4 text-body text-text-tertiary">
+            This section has not been generated yet. Run{' '}
+            <span className="font-mono text-caption">/generate-overleaf</span>.
+          </p>
+        )}
+      </div>
+    </div>
+  );
+}

package/dashboard/app/overleaf/page.tsx

@@ -0,0 +1,32 @@
+import { readMarkdownFile } from '@/lib/data';
+import { NotYetGenerated } from '@/components/NotYetGenerated';
+import { OverleafClient, type OverleafSections } from './OverleafClient';
+
+// Read .hex/overleaf/ at request time, not at build time.
+export const dynamic = 'force-dynamic';
+
+export default function OverleafPage() {
+  const sections: OverleafSections = {
+    executive_summary: readMarkdownFile('overleaf/executive_summary.txt'),
+    audited_files: readMarkdownFile('overleaf/audited_files.txt'),
+    summary_of_findings: readMarkdownFile('overleaf/summary_of_findings.txt'),
+    findings: readMarkdownFile('overleaf/findings.txt'),
+  };
+
+  const anyPresent = Object.values(sections).some(Boolean);
+  if (!anyPresent) {
+    return (
+      <div>
+        <header className="mb-6">
+          <h1 className="text-title font-semibold text-text-primary">Overleaf</h1>
+          <p className="mt-1 text-body text-text-secondary">
+            LaTeX report sections, ready to paste into the Nethermind Overleaf template.
+          </p>
+        </header>
+        <NotYetGenerated command="/generate-overleaf" />
+      </div>
+    );
+  }
+
+  return <OverleafClient sections={sections} />;
+}

package/dashboard/components/DashboardLayout.tsx

@@ -326,7 +326,13 @@ const NAV_GROUPS = [
       { href: '/flows', label: 'Flows', icon: IconFlows },
     ],
   },
-  { label: 'Issues', items: [{ href: '/issues', label: 'Board', icon: IconFindings }] },
+  {
+    label: 'Issues',
+    items: [
+      { href: '/issues', label: 'Board', icon: IconFindings },
+      { href: '/overleaf', label: 'Overleaf', icon: IconReport },
+    ],
+  },
 ];
 
 export { NAV_GROUPS };
@@ -395,7 +401,7 @@ export function DashboardLayout({ children }: { children: React.ReactNode }) {
         <div className="px-5 pb-4 pt-6">
           <div className="flex items-baseline gap-2">
             <span className="text-title font-semibold text-text-primary">Hex</span>
-            <span className="text-caption text-text-tertiary">v0.4.4</span>
+            <span className="text-caption text-text-tertiary">v0.4.5</span>
           </div>
         </div>
 

package/dashboard/lib/finding-markdown.ts

@@ -0,0 +1,59 @@
+import type { BoardIssue } from '@/app/issues/IssuesBoardClient';
+
+/**
+ * Single source of truth for the finding markdown format used by the board's
+ * "Copy as HackMD" button (and matching the GitHub issue body the /sync-issues
+ * skill renders). Keep this aligned with src/skills/sync-issues.md.
+ */
+export interface FormatContext {
+  /** config.json settings.report.repository_url, if set */
+  repositoryUrl?: string;
+  /** config.json settings.report.initial_commit, if set */
+  commit?: string;
+}
+
+function fileLink(file: string, ctx: FormatContext): string {
+  if (ctx.repositoryUrl && ctx.commit) {
+    const base = ctx.repositoryUrl.replace(/\/+$/, '');
+    return `[\`${file}\`](${base}/blob/${ctx.commit}/${file})`;
+  }
+  // Empty link target — explicit, matches the GitHub issue template.
+  return `[\`${file}\`]()`;
+}
+
+/** The five-field body shared by HackMD copy and the GitHub issue body. */
+function bodyFields(issue: BoardIssue, ctx: FormatContext): string {
+  const seen = new Set<string>();
+  const files = issue.code_locations
+    .map((l) => l.file)
+    .filter((f) => f && !seen.has(f) && seen.add(f))
+    .map((f) => fileLink(f, ctx))
+    .join(', ');
+  const status = issue.resolution || 'Unresolved';
+  const update = issue.update_from_client ?? '';
+  return [
+    `**File(s)**: ${files}`,
+    ``,
+    `**Description**: ${issue.description}`,
+    ``,
+    `**Recommendation(s)**: ${issue.recommendation}`,
+    ``,
+    `**Status**: ${status}`,
+    ``,
+    `**Update from the client**: ${update}`,
+  ].join('\n');
+}
+
+/** HackMD-style: leading `## [Severity] Title` heading, then the body. */
+export function findingToHackmd(issue: BoardIssue, ctx: FormatContext = {}): string {
+  return `## [${issue.severity}] ${issue.title}\n\n${bodyFields(issue, ctx)}\n`;
+}
+
+/**
+ * GitHub issue body: no heading (the GH issue title carries `[Severity] Title`),
+ * no trailing attribution. Returns the body WITHOUT the round-trip footer; the
+ * sync caller appends `<!-- hex-finding-id: <id> -->` separately.
+ */
+export function findingToGithubBody(issue: BoardIssue, ctx: FormatContext = {}): string {
+  return bodyFields(issue, ctx);
+}

package/dashboard/next.config.mjs

@@ -3,6 +3,10 @@ const nextConfig = {
   reactStrictMode: true,
   experimental: {
     serverComponentsExternalPackages: ['chokidar'],
+    // Allow importing the canonical issue-mutation module from ../src/core/
+    // (shared with the `hex issue` CLI). The module depends only on node
+    // builtins, so nothing heavy leaks into the bundle.
+    externalDir: true,
   },
 };
 

package/dist/analysis/external-calls.d.ts

@@ -1,8 +1,15 @@
 import type { SlitherDetectorResult } from '../parsers/slither.js';
 import type { ASTExternalCall } from '../parsers/solidity-parser.js';
 import type { ExternalCall } from '../types/index.js';
+/**
+ * Whether Slither enrichment ran, and what it found:
+ *  - 'with-findings': Slither ran and reported detector results (most authoritative)
+ *  - 'clean':         Slither ran but reported nothing for this codebase
+ *  - 'unavailable':   Slither did not run (binary missing, parse error, etc.)
+ */
+export type SlitherState = 'with-findings' | 'clean' | 'unavailable';
 /**
  * Build external calls from AST-extracted calls, optionally enriched with Slither data.
  */
-export declare function buildExternalCalls(astCalls: ASTExternalCall[], stateVarsImmutability: Map<string, boolean>, scopeContracts: Set<string>, accessControlledSetters: Map<string, string>, slitherDetectors?: SlitherDetectorResult[]): ExternalCall[];
+export declare function buildExternalCalls(astCalls: ASTExternalCall[], stateVarsImmutability: Map<string, boolean>, scopeContracts: Set<string>, accessControlledSetters: Map<string, string>, slitherDetectors?: SlitherDetectorResult[], slitherState?: SlitherState): ExternalCall[];
 //# sourceMappingURL=external-calls.d.ts.map

package/dist/analysis/external-calls.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"external-calls.d.ts","sourceRoot":"","sources":["../../src/analysis/external-calls.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,qBAAqB,EAAE,MAAM,uBAAuB,CAAC;AACnE,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AACrE,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,mBAAmB,CAAC;AAatD;;GAEG;AACH,wBAAgB,kBAAkB,CAChC,QAAQ,EAAE,eAAe,EAAE,EAC3B,qBAAqB,EAAE,GAAG,CAAC,MAAM,EAAE,OAAO,CAAC,EAC3C,cAAc,EAAE,GAAG,CAAC,MAAM,CAAC,EAC3B,uBAAuB,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC5C,gBAAgB,CAAC,EAAE,qBAAqB,EAAE,GACzC,YAAY,EAAE,CAkEhB"}
+{"version":3,"file":"external-calls.d.ts","sourceRoot":"","sources":["../../src/analysis/external-calls.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,qBAAqB,EAAE,MAAM,uBAAuB,CAAC;AACnE,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,+BAA+B,CAAC;AACrE,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,mBAAmB,CAAC;AAiCtD;;;;;GAKG;AACH,MAAM,MAAM,YAAY,GAAG,eAAe,GAAG,OAAO,GAAG,aAAa,CAAC;AAErE;;GAEG;AACH,wBAAgB,kBAAkB,CAChC,QAAQ,EAAE,eAAe,EAAE,EAC3B,qBAAqB,EAAE,GAAG,CAAC,MAAM,EAAE,OAAO,CAAC,EAC3C,cAAc,EAAE,GAAG,CAAC,MAAM,CAAC,EAC3B,uBAAuB,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC5C,gBAAgB,CAAC,EAAE,qBAAqB,EAAE,EAC1C,YAAY,GAAE,YAIG,GAChB,YAAY,EAAE,CA8FhB"}

package/dist/analysis/external-calls.js

@@ -1,9 +1,29 @@
 // Call type classification heuristics
 const CALL_TYPE_PATTERNS = {
-    token_transfer: ['transfer', 'transferFrom', 'safeTransfer', 'safeTransferFrom', 'approve', 'send'],
-    oracle_read: ['getPrice', 'latestRoundData', 'latestAnswer', 'getRoundData', 'consult', 'observe'],
+    token_transfer: [
+        'transfer',
+        'transferFrom',
+        'safeTransfer',
+        'safeTransferFrom',
+        'approve',
+        'send',
+    ],
+    oracle_read: [
+        'getPrice',
+        'latestRoundData',
+        'latestAnswer',
+        'getRoundData',
+        'consult',
+        'observe',
+    ],
     flash_loan: ['flashLoan', 'flash', 'flashBorrow'],
-    swap: ['swap', 'swapExactTokensForTokens', 'swapTokensForExactTokens', 'exactInputSingle', 'exactInput'],
+    swap: [
+        'swap',
+        'swapExactTokensForTokens',
+        'swapTokensForExactTokens',
+        'exactInputSingle',
+        'exactInput',
+    ],
     liquidity: ['addLiquidity', 'removeLiquidity', 'mint', 'burn'],
     delegate_call: ['delegatecall'],
     low_level: ['call', 'staticcall'],
@@ -11,7 +31,11 @@ const CALL_TYPE_PATTERNS = {
 /**
  * Build external calls from AST-extracted calls, optionally enriched with Slither data.
  */
-export function buildExternalCalls(astCalls, stateVarsImmutability, scopeContracts, accessControlledSetters, slitherDetectors) {
+export function buildExternalCalls(astCalls, stateVarsImmutability, scopeContracts, accessControlledSetters, slitherDetectors, slitherState = slitherDetectors != null
+    ? slitherDetectors.length > 0
+        ? 'with-findings'
+        : 'clean'
+    : 'unavailable') {
     // Build Slither enrichment maps if available
     const slitherUnchecked = new Set();
     const slitherReentrancy = new Set();
@@ -41,9 +65,29 @@ export function buildExternalCalls(astCalls, stateVarsImmutability, scopeContrac
         const trustLevel = classifyTrustLevel(ac.target, stateVarsImmutability, scopeContracts, accessControlledSetters);
         // Slither enrichment
         const lineKey = `${ac.file}:${ac.lineStart}`;
-        const hasSlither = slitherDetectors != null;
+        const ran = slitherState !== 'unavailable';
         const isUnchecked = slitherUnchecked.has(lineKey);
         const isReentrancy = slitherReentrancy.has(lineKey);
+        // Confidence: a detector that actually fired on this call is the strongest
+        // signal; a clean Slither run that simply didn't flag it is medium; no
+        // Slither run at all is a low-confidence heuristic default.
+        const returnCheckedConfidence = isUnchecked
+            ? 'high'
+            : slitherState === 'with-findings'
+                ? 'high'
+                : slitherState === 'clean'
+                    ? 'medium'
+                    : 'low';
+        const reentrancyConfidence = isReentrancy
+            ? 'high'
+            : slitherState === 'with-findings'
+                ? 'high'
+                : slitherState === 'clean'
+                    ? 'medium'
+                    : 'low';
+        const ranReasoning = 'Slither ran without flagging this call';
+        const unavailableReturnReasoning = 'Slither unavailable — assuming checked (heuristic default)';
+        const unavailableReentrancyReasoning = 'Slither unavailable — reentrancy guard status unknown (heuristic default)';
         calls.push({
             contract: ac.contract,
             function: ac.function,
@@ -56,16 +100,16 @@ export function buildExternalCalls(astCalls, stateVarsImmutability, scopeContrac
             target: ac.target,
             method: ac.method,
             return_checked: {
-                value: hasSlither ? !isUnchecked : true,
-                confidence: hasSlither ? 'high' : 'low',
-                derived_from: hasSlither ? 'slither' : 'heuristic',
-                ...(hasSlither ? {} : { reasoning: 'No Slither data — assuming checked' }),
+                value: ran ? !isUnchecked : true,
+                confidence: returnCheckedConfidence,
+                derived_from: isUnchecked ? 'slither' : ran ? 'slither' : 'heuristic',
+                ...(isUnchecked ? {} : { reasoning: ran ? ranReasoning : unavailableReturnReasoning }),
             },
             inside_reentrancy_guard: {
-                value: hasSlither ? !isReentrancy : false,
-                confidence: hasSlither ? (isReentrancy ? 'high' : 'medium') : 'low',
-                derived_from: hasSlither ? 'slither' : 'heuristic',
-                ...(hasSlither ? {} : { reasoning: 'No Slither data — reentrancy guard status unknown' }),
+                value: ran ? !isReentrancy : false,
+                confidence: reentrancyConfidence,
+                derived_from: isReentrancy ? 'slither' : ran ? 'slither' : 'heuristic',
+                ...(isReentrancy ? {} : { reasoning: ran ? ranReasoning : unavailableReentrancyReasoning }),
             },
             call_type: callType,
             trust_level: trustLevel,

package/dist/analysis/external-calls.js.map

@@ -1 +1 @@
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package/dist/commands/calls.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"calls.d.ts","sourceRoot":"","sources":["../../src/commands/calls.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAapC,eAAO,MAAM,YAAY,SA+FrB,CAAC"}
+{"version":3,"file":"calls.d.ts","sourceRoot":"","sources":["../../src/commands/calls.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAcpC,eAAO,MAAM,YAAY,SA+GrB,CAAC"}

package/dist/commands/calls.js

@@ -30,19 +30,28 @@ export const callsCommand = new Command('calls')
             allAstCalls.push(...calls);
         }
         logger.info(`AST extraction found ${allAstCalls.length} external calls`);
-        // Tier 2: Try Slither for enrichment (unchecked returns, reentrancy)
-        let slitherDetectors = undefined;
+        // Tier 2: Try Slither for enrichment (unchecked returns, reentrancy).
+        // Track three states explicitly so the analyzer can distinguish "Slither
+        // ran clean" (medium confidence) from "Slither never ran" (low confidence).
+        let slitherDetectors = [];
+        let slitherState = 'unavailable';
         try {
             spin.text = 'Running Slither detectors for enrichment...';
             const result = await runSlither(config.project.project_dir, [
                 '.',
                 '--detect',
                 'unchecked-transfer,unchecked-lowlevel,reentrancy-eth,reentrancy-no-eth,reentrancy-benign,reentrancy-events,calls-loop',
-                '--json', '-',
+                '--json',
+                '-',
             ]);
-            if (result.exitCode === 0 && result.stdout) {
+            // Slither exits non-zero when it finds issues, so gate on parseable JSON
+            // output rather than exit code.
+            if (result.stdout) {
                 slitherDetectors = parseDetectors(JSON.parse(result.stdout));
-                logger.info('Slither enrichment available — enhanced return check and reentrancy data');
+                slitherState = slitherDetectors.length > 0 ? 'with-findings' : 'clean';
+                logger.info(slitherState === 'clean'
+                    ? 'Slither ran clean (no detector findings) — Tier 2 fields use medium-confidence defaults'
+                    : 'Slither enrichment available — enhanced return check and reentrancy data');
             }
         }
         catch {
@@ -76,7 +85,7 @@ export const callsCommand = new Command('calls')
                 }
             }
         }
-        const calls = buildExternalCalls(allAstCalls, immutabilityMap, scopeContracts, accessControlledSetters, slitherDetectors);
+        const calls = buildExternalCalls(allAstCalls, immutabilityMap, scopeContracts, accessControlledSetters, slitherDetectors, slitherState);
         const externalCalls = { calls };
         const outPath = writeJsonOutput(outputDir, 'external-calls.json', externalCalls);
         spin.succeed('External call analysis complete');

package/dist/commands/calls.js.map

@@ -1 +1 @@
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package/dist/commands/init.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../src/commands/init.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAapC,eAAO,MAAM,WAAW,SAqVpB,CAAC"}
+{"version":3,"file":"init.d.ts","sourceRoot":"","sources":["../../src/commands/init.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAapC,eAAO,MAAM,WAAW,SAmVpB,CAAC"}

package/dist/commands/init.js

@@ -217,13 +217,13 @@ All analysis outputs live here. Key files and what they answer:
 | \`state-vars.json\` | State variables, types, visibility, read/write | storage, mutability, state layout |
 | \`external-calls.json\` | External calls, reentrancy guards, trust levels | external interactions, reentrancy risk |
 | \`overview.md\` | AI-generated protocol overview | what the protocol does, architecture |
-| \`invariants.md\` | Protocol invariants from docs and code | invariants, assumptions, properties |
 | \`spec-conformance.json\` | Spec vs code deviations | spec compliance, ERC conformance |
-| \`findings.json\` | Audit findings (canonical) | reported issues, vulnerabilities |
-| \`tracking.json\` | Finding status and duplicates | finding triage, status |
-| \`comparison.json\` | AI cross-check results | AI-found issues, novel findings |
+| \`findings.json\` | Audit findings (canonical), wrapped as \`{ "findings": [...] }\` | reported issues, vulnerabilities |
+| \`tracking.json\` | Board state per issue (status, source, duplicate_of), wrapped as \`{ "findings": [...] }\` | finding triage, board columns |
+| \`comparison.json\` | Dedup match_signals (auditagent / github) | duplicate detection |
 | \`progress.json\` | Audit progress tracking | what has been reviewed |
 | \`diagrams/\` | Mermaid architecture and flow diagrams | system diagrams, flows |
+| \`overleaf/\` | LaTeX report sections (executive_summary, audited_files, summary_of_findings, findings) | final report export |
 
 Not all files exist initially — they are created as you run skills and CLI commands.
 
@@ -233,31 +233,29 @@ Skills are in \`.claude/skills/\` and auto-discovered by Claude Code. Type \`/\`
 
 **Recommended workflow order:**
 
-1. \`/init-audit\` — Initialize project, audit dependencies, run analysis pipeline
-2. \`/generate-overview\` — Write protocol overview from analysis data
-3. \`/generate-diagram\` — Create Mermaid architecture diagram
-4. \`/generate-flows\` — Create Mermaid flow charts per user type
-5. \`/identify-invariants\` — Three-pass invariant identification (docs, code, comparison)
-6. \`/check-spec-conformance\` — Verify code matches docs, NatSpec, interfaces, ERCs
-7. \`/generate-poc\` — Validate an issue with a runnable proof-of-concept test
-8. \`/write-finding\` — Write a structured finding with severity and recommendation
-9. \`/conformance-to-findings\` — Batch-convert spec deviations into findings
-10. \`/run-ai-analysis\` — Orchestrate all AI audit tools with preflight checks
-11. \`/compare-findings\` — Cross-check findings against AI agent results
-12. \`/validate-ai-finding\` — Independently verify a novel AI-found issue
+1. \`/init-audit\` — Initialize, dependency safety, full analysis pipeline, overview, diagrams, flows, spec conformance, board materialization (all in one)
+2. \`/write-finding\` — Record a manual issue as a Potential card on the board
+3. \`/validate-issue\` — Validate any Potential card (manual / auditagent / conformance / github); per-issue PoC or memo-only
+4. \`/generate-poc\` — Generate and run a proof-of-concept test (invoked by /validate-issue)
+5. \`/ingest-aa-report\` — Ingest a completed Nethermind AuditAgent scan by ID, with inline dedup
+6. \`/sync-issues\` — Two-way GitHub Issues sync (GitHub canonical)
+7. \`/generate-overleaf\` — Emit the four LaTeX report sections into \`${config.settings.output_dir}/overleaf/\`
 
-Each skill builds on previous outputs. Run them in order for best results.
+Each skill builds on previous outputs.
 
 ## CLI Commands
 
-- \`npx hex analyze\` — Run all deterministic analysis (stats, deps, access, state, calls)
+- \`npx hex analyze\` — Run all deterministic analysis (stats, deps, access, state, calls, patterns, constraints, surface)
 - \`npx hex context\` — Assemble full codebase context for AI prompts
 - \`npx hex context --target <Contract>\` — Focused context for a single contract
 - \`npx hex dashboard\` — Open browser dashboard at http://localhost:3000
+- \`npx hex issue move <id> --to <column>\` — Move an issue between board columns
+- \`npx hex issue patch <id> [--severity ...] [--resolution ...]\` — Edit issue fields
+- \`npx hex update\` — Update hex-audit to the latest version
 
 ## Writing Style (applies to every skill that produces text)
 
-Anything you write into \`.hex/\` files (findings, overview, invariants, spec conformance) ends up in front of a security team or in a public report. Write like a senior auditor, not like an AI model showing off. The detectable patterns below are off-limits:
+Anything you write into \`.hex/\` files (findings, overview, spec conformance) ends up in front of a security team or in a public report. Write like a senior auditor, not like an AI model showing off. The detectable patterns below are off-limits:
 
 ### Banned punctuation and words
 

package/dist/commands/init.js.map

@@ -1 +1 @@
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package/dist/commands/issue.d.ts

@@ -0,0 +1,3 @@
+import { Command } from 'commander';
+export declare const issueCommand: Command;
+//# sourceMappingURL=issue.d.ts.map

package/dist/commands/issue.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"issue.d.ts","sourceRoot":"","sources":["../../src/commands/issue.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AA+HpC,eAAO,MAAM,YAAY,SAIH,CAAC"}