heor-agent-mcp 1.14.0 → 1.14.2

package/dist/models/modelUtils.d.ts

@@ -4,6 +4,24 @@
  */
 import type { CEModelParams } from "../providers/types.js";
 import type { MarkovParams } from "./markov.js";
+/**
+ * Structural assumptions baked into `buildMarkovParamsFromCE`.
+ *
+ * These are simplified illustrative defaults used when no indication-specific
+ * epidemiological data are supplied. They materially drive every Markov-based
+ * ICER produced by this tool. They MUST be replaced with indication-specific
+ * values before the model is used for any regulatory submission, HTA dossier,
+ * or payer negotiation.
+ *
+ * Callers (e.g. costEffectivenessModel.ts) should surface all three strings
+ * via `addAssumption` so they appear in the audit trail and visible output.
+ *
+ * Rationale for exporting rather than calling addAssumption here:
+ * modelUtils is a pure computation module with no audit dependency — it has
+ * no access to an AuditRecord instance. The caller owns the audit lifecycle
+ * and is the correct place to wire these strings in.
+ */
+export declare const MARKOV_STRUCTURAL_ASSUMPTIONS: readonly string[];
 export declare function getTimeHorizonYears(horizon: CEModelParams["time_horizon"]): number;
 /**
  * Build MarkovParams from CEModelParams using a 3-state model

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package/dist/models/modelUtils.js

@@ -4,6 +4,40 @@
  */
 import { runMarkovModel } from "./markov.js";
 const DISCOUNT_RATE = 0.035;
+/**
+ * Structural assumptions baked into `buildMarkovParamsFromCE`.
+ *
+ * These are simplified illustrative defaults used when no indication-specific
+ * epidemiological data are supplied. They materially drive every Markov-based
+ * ICER produced by this tool. They MUST be replaced with indication-specific
+ * values before the model is used for any regulatory submission, HTA dossier,
+ * or payer negotiation.
+ *
+ * Callers (e.g. costEffectivenessModel.ts) should surface all three strings
+ * via `addAssumption` so they appear in the audit trail and visible output.
+ *
+ * Rationale for exporting rather than calling addAssumption here:
+ * modelUtils is a pure computation module with no audit dependency — it has
+ * no access to an AuditRecord instance. The caller owns the audit lifecycle
+ * and is the correct place to wire these strings in.
+ */
+export const MARKOV_STRUCTURAL_ASSUMPTIONS = [
+    "STRUCTURAL ASSUMPTION (illustrative, not epidemiologically derived): " +
+        "Background annual mortality fixed at 2% (0.02). " +
+        "This is a generic placeholder. Replace with indication-specific life-table " +
+        "mortality for submission use.",
+    "STRUCTURAL ASSUMPTION (illustrative, not epidemiologically derived): " +
+        "Annual probability of staying on intervention derived as " +
+        "0.5 + efficacy_delta × 0.5 — a heuristic mapping from the unitless " +
+        "efficacy_delta input to a Markov transition probability with no " +
+        "epidemiological basis. Replace with a clinical-trial-derived " +
+        "treatment-discontinuation rate for submission use.",
+    "STRUCTURAL ASSUMPTION (illustrative, not epidemiologically derived): " +
+        "Comparator retention set to 70% of intervention retention " +
+        "(baselineProbStayOn = probStayOnIntervention × 0.7) — an arbitrary scalar " +
+        "with no indication-specific basis. Replace with trial-observed or " +
+        "registry-derived comparator discontinuation data for submission use.",
+];
 export function getTimeHorizonYears(horizon) {
     if (horizon === "lifetime")
         return 40;

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package/dist/providers/direct/biorxiv.d.ts

@@ -1,3 +1,4 @@
 import type { LiteratureResult } from "../types.js";
+export declare function extractBiorxivKeywords(query: string): string[];
 export declare function fetchBiorxiv(query: string, maxResults: number): Promise<LiteratureResult[]>;
 //# sourceMappingURL=biorxiv.d.ts.map

package/dist/providers/direct/biorxiv.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"biorxiv.d.ts","sourceRoot":"","sources":["../../../src/providers/direct/biorxiv.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAapD,wBAAsB,YAAY,CAChC,KAAK,EAAE,MAAM,EACb,UAAU,EAAE,MAAM,GACjB,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAkC7B"}
+{"version":3,"file":"biorxiv.d.ts","sourceRoot":"","sources":["../../../src/providers/direct/biorxiv.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAepD,wBAAgB,sBAAsB,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,EAAE,CAa9D;AAED,wBAAsB,YAAY,CAChC,KAAK,EAAE,MAAM,EACb,UAAU,EAAE,MAAM,GACjB,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAmC7B"}

package/dist/providers/direct/biorxiv.js

@@ -1,33 +1,49 @@
 const BASE = "https://api.biorxiv.org/details/medrxiv";
+const BIORXIV_QUERY_NOISE = /\b(?:AND|OR|NOT)\b/gi;
+export function extractBiorxivKeywords(query) {
+    return [
+        ...new Set(query
+            .replace(/[(){}[\]:"']/g, " ")
+            .replace(BIORXIV_QUERY_NOISE, " ")
+            .replace(/[?*]/g, "")
+            .toLowerCase()
+            .split(/\s+/)
+            .map((term) => term.trim())
+            .filter((term) => term.length >= 3)),
+    ];
+}
 export async function fetchBiorxiv(query, maxResults) {
-    try {
-        const dateFrom = new Date();
-        dateFrom.setFullYear(dateFrom.getFullYear() - 2);
-        const from = dateFrom.toISOString().split("T")[0];
-        const to = new Date().toISOString().split("T")[0];
-        const url = `${BASE}/${from}/${to}/0/json`;
-        const res = await fetch(url, { signal: AbortSignal.timeout(15_000) });
-        if (!res.ok)
-            return [];
-        const data = (await res.json());
-        const queryLower = query.toLowerCase();
-        return (data.collection ?? [])
-            .filter((p) => p.title.toLowerCase().includes(queryLower) ||
-            p.abstract.toLowerCase().includes(queryLower))
-            .slice(0, maxResults)
-            .map((p) => ({
-            id: `biorxiv_${p.doi.replace(/\//g, "_")}`,
-            source: "biorxiv",
-            title: p.title,
-            authors: p.authors.split(";").map((a) => a.trim()),
-            date: p.date,
-            study_type: "preprint",
-            abstract: p.abstract,
-            url: `https://www.medrxiv.org/content/${p.doi}`,
-        }));
+    const dateFrom = new Date();
+    dateFrom.setFullYear(dateFrom.getFullYear() - 2);
+    const from = dateFrom.toISOString().split("T")[0];
+    const to = new Date().toISOString().split("T")[0];
+    // bioRxiv/medRxiv has no true search endpoint. We fetch the first page only
+    // (offset 0, roughly 100 records) and keyword-filter locally.
+    const url = `${BASE}/${from}/${to}/0/json`;
+    const res = await fetch(url, { signal: AbortSignal.timeout(15_000) });
+    if (!res.ok) {
+        const body = await res.text().catch(() => "");
+        throw new Error(`bioRxiv API ${res.status}: ${body.slice(0, 200)}`);
     }
-    catch {
+    const data = (await res.json());
+    const keywords = extractBiorxivKeywords(query);
+    if (keywords.length === 0)
         return [];
-    }
+    return (data.collection ?? [])
+        .filter((p) => {
+        const haystack = `${p.title} ${p.abstract}`.toLowerCase();
+        return keywords.some((term) => haystack.includes(term));
+    })
+        .slice(0, maxResults)
+        .map((p) => ({
+        id: `biorxiv_${p.doi.replace(/\//g, "_")}`,
+        source: "biorxiv",
+        title: p.title,
+        authors: p.authors.split(";").map((a) => a.trim()),
+        date: p.date,
+        study_type: "preprint",
+        abstract: p.abstract,
+        url: `https://www.medrxiv.org/content/${p.doi}`,
+    }));
 }
 //# sourceMappingURL=biorxiv.js.map

package/dist/providers/direct/biorxiv.js.map

@@ -1 +1 @@
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package/dist/providers/direct/cmsNadac.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"cmsNadac.d.ts","sourceRoot":"","sources":["../../../src/providers/direct/cmsNadac.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAoBpD,wBAAsB,aAAa,CACjC,KAAK,EAAE,MAAM,EACb,UAAU,EAAE,MAAM,GACjB,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAgC7B"}
+{"version":3,"file":"cmsNadac.d.ts","sourceRoot":"","sources":["../../../src/providers/direct/cmsNadac.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAoBpD,wBAAsB,aAAa,CACjC,KAAK,EAAE,MAAM,EACb,UAAU,EAAE,MAAM,GACjB,OAAO,CAAC,gBAAgB,EAAE,CAAC,CA2C7B"}

package/dist/providers/direct/cmsNadac.js

@@ -5,16 +5,28 @@ const BASE = "https://data.cms.gov/data-api/v1/dataset";
 // NADAC dataset UUID (stable since 2022)
 const NADAC_DATASET_ID = "dfa2ab14-06c2-4b99-9f0e-215a6713b5f2";
 export async function fetchCmsNadac(query, maxResults) {
-    try {
-        // The CMS data-api supports filter syntax
-        const url = `${BASE}/${NADAC_DATASET_ID}/data?filter[NDC Description][condition][path]=NDC Description&filter[NDC Description][condition][operator]=CONTAINS&filter[NDC Description][condition][value]=${encodeURIComponent(query.toUpperCase())}&size=${Math.min(maxResults, 100)}`;
-        const res = await fetch(url, { signal: AbortSignal.timeout(15_000) });
-        if (!res.ok)
-            return getFallback(query, maxResults);
-        const data = (await res.json());
-        if (!Array.isArray(data) || data.length === 0)
-            return getFallback(query, maxResults);
-        return data.slice(0, maxResults).map((row, i) => ({
+    // The CMS data-api supports filter syntax. Use URLSearchParams because the
+    // JSONAPI filter key itself contains spaces and brackets.
+    const params = new URLSearchParams({
+        "filter[NDC Description][condition][path]": "NDC Description",
+        "filter[NDC Description][condition][operator]": "CONTAINS",
+        "filter[NDC Description][condition][value]": query.toUpperCase(),
+        size: String(Math.min(maxResults, 100)),
+    });
+    const url = `${BASE}/${NADAC_DATASET_ID}/data?${params}`;
+    const res = await fetch(url, { signal: AbortSignal.timeout(15_000) });
+    if (!res.ok) {
+        const body = await res.text().catch(() => "");
+        throw new Error(`CMS NADAC API ${res.status}: ${body.slice(0, 200)}`);
+    }
+    const data = (await res.json());
+    if (!Array.isArray(data) || data.length === 0)
+        return getFallback(query, maxResults);
+    return data.slice(0, maxResults).map((row, i) => {
+        const resultParams = new URLSearchParams({
+            "filter[NDC]": row["NDC"] ?? "",
+        });
+        return {
             id: `cms_nadac_${row["NDC"] ?? i}`,
             source: "cms_nadac",
             title: `${row["NDC Description"] ?? "Unknown drug"} — NADAC $${row["NADAC Per Unit"] ?? "N/A"}/${row["Pricing Unit"] ?? "unit"}`,
@@ -30,12 +42,9 @@ export async function fetchCmsNadac(query, maxResults) {
                 `OTC: ${row["OTC"] ?? "N"}`,
                 `Effective: ${row["Effective Date"] ?? ""}`,
             ].join(" | "),
-            url: `https://data.cms.gov/dataset/dfa2ab14-06c2-4b99-9f0e-215a6713b5f2/data?filter[NDC]=${row["NDC"] ?? ""}`,
-        }));
-    }
-    catch {
-        return getFallback(query, maxResults);
-    }
+            url: `https://data.cms.gov/dataset/dfa2ab14-06c2-4b99-9f0e-215a6713b5f2/data?${resultParams}`,
+        };
+    });
 }
 function getFallback(query, maxResults) {
     return [

package/dist/providers/direct/cmsNadac.js.map

@@ -1 +1 @@
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+{"version":3,"file":"cmsNadac.js","sourceRoot":"","sources":["../../../src/providers/direct/cmsNadac.ts"],"names":[],"mappings":"AAEA,+EAA+E;AAC/E,qCAAqC;AACrC,4DAA4D;AAC5D,MAAM,IAAI,GAAG,0CAA0C,CAAC;AACxD,yCAAyC;AACzC,MAAM,gBAAgB,GAAG,sCAAsC,CAAC;AAahE,MAAM,CAAC,KAAK,UAAU,aAAa,CACjC,KAAa,EACb,UAAkB;IAElB,2EAA2E;IAC3E,0DAA0D;IAC1D,MAAM,MAAM,GAAG,IAAI,eAAe,CAAC;QACjC,0CAA0C,EAAE,iBAAiB;QAC7D,8CAA8C,EAAE,UAAU;QAC1D,2CAA2C,EAAE,KAAK,CAAC,WAAW,EAAE;QAChE,IAAI,EAAE,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,UAAU,EAAE,GAAG,CAAC,CAAC;KACxC,CAAC,CAAC;IACH,MAAM,GAAG,GAAG,GAAG,IAAI,IAAI,gBAAgB,SAAS,MAAM,EAAE,CAAC;IACzD,MAAM,GAAG,GAAG,MAAM,KAAK,CAAC,GAAG,EAAE,EAAE,MAAM,EAAE,WAAW,CAAC,OAAO,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;IACtE,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC;QACZ,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,IAAI,EAAE,CAAC,KAAK,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC;QAC9C,MAAM,IAAI,KAAK,CAAC,iBAAiB,GAAG,CAAC,MAAM,KAAK,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,GAAG,CAAC,EAAE,CAAC,CAAC;IACxE,CAAC;IAED,MAAM,IAAI,GAAG,CAAC,MAAM,GAAG,CAAC,IAAI,EAAE,CAAe,CAAC;IAC9C,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,IAAI,CAAC,IAAI,IAAI,CAAC,MAAM,KAAK,CAAC;QAC3C,OAAO,WAAW,CAAC,KAAK,EAAE,UAAU,CAAC,CAAC;IAExC,OAAO,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,UAAU,CAAC,CAAC,GAAG,CAAC,CAAC,GAAG,EAAE,CAAC,EAAE,EAAE;QAC9C,MAAM,YAAY,GAAG,IAAI,eAAe,CAAC;YACvC,aAAa,EAAE,GAAG,CAAC,KAAK,CAAC,IAAI,EAAE;SAChC,CAAC,CAAC;QACH,OAAO;YACL,EAAE,EAAE,aAAa,GAAG,CAAC,KAAK,CAAC,IAAI,CAAC,EAAE;YAClC,MAAM,EAAE,WAAoB;YAC5B,KAAK,EAAE,GAAG,GAAG,CAAC,iBAAiB,CAAC,IAAI,cAAc,aAAa,GAAG,CAAC,gBAAgB,CAAC,IAAI,KAAK,IAAI,GAAG,CAAC,cAAc,CAAC,IAAI,MAAM,EAAE;YAChI,OAAO,EAAE,CAAC,0CAA0C,CAAC;YACrD,IAAI,EAAE,GAAG,CAAC,gBAAgB,CAAC,IAAI,EAAE;YACjC,UAAU,EAAE,SAAS;YACrB,QAAQ,EAAE;gBACR,QAAQ,GAAG,CAAC,KAAK,CAAC,IAAI,KAAK,EAAE;gBAC7B,oBAAoB,GAAG,CAAC,gBAAgB,CAAC,IAAI,KAAK,EAAE;gBACpD,iBAAiB,GAAG,CAAC,cAAc,CAAC,IAAI,KAAK,EAAE;gBAC/C,mBAAmB,GAAG,CAAC,iCAAiC,CAAC,IAAI,KAAK,EAAE;gBACpE,kBAAkB,GAAG,CAAC,yBAAyB,CAAC,IAAI,KAAK,EAAE;gBAC3D,QAAQ,GAAG,CAAC,KAAK,CAAC,IAAI,GAAG,EAAE;gBAC3B,cAAc,GAAG,CAAC,gBAAgB,CAAC,IAAI,EAAE,EAAE;aAC5C,CAAC,IAAI,CAAC,KAAK,CAAC;YACb,GAAG,EAAE,0EAA0E,YAAY,EAAE;SAC9F,CAAC;IACJ,CAAC,CAAC,CAAC;AACL,CAAC;AAED,SAAS,WAAW,CAAC,KAAa,EAAE,UAAkB;IACpD,OAAO;QACL;YACE,EAAE,EAAE,kBAAkB;YACtB,MAAM,EAAE,WAAoB;YAC5B,KAAK,EAAE,qBAAqB,KAAK,EAAE;YACnC,OAAO,EAAE,CAAC,0CAA0C,CAAC;YACrD,IAAI,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC,QAAQ,EAAE;YACzC,UAAU,EAAE,SAAS;YACrB,QAAQ,EAAE,8EAA8E,KAAK,2NAA2N;YACxT,GAAG,EAAE,4CAA4C,kBAAkB,CAAC,KAAK,CAAC,EAAE;SAC7E;KACF,CAAC,KAAK,CAAC,CAAC,EAAE,UAAU,CAAC,CAAC;AACzB,CAAC"}

package/dist/providers/direct/embase.d.ts

@@ -1,3 +1,20 @@
 import type { LiteratureResult } from "../types.js";
+/**
+ * Sanitise a raw search query before sending it to the Scopus free-text
+ * search endpoint.  The Scopus translator returns 400 "Error translating
+ * query" when it encounters:
+ *   - parentheses / curly- / square-brackets (grouping syntax it can't parse
+ *     in free-text mode), e.g. `tirzepatide (obesity OR overweight)`
+ *   - bare boolean operators adjacent to terms
+ *   - field-prefix punctuation such as TITLE:"…"
+ *
+ * Reduction to a flat space-separated term list — which Scopus treats as
+ * implicit AND — is the most reliable strategy.  Wildcards (* ?) are
+ * intentionally preserved.
+ */
+export declare function cleanScopusQuery(raw: string): {
+    cleaned: string;
+    stripped: string[];
+};
 export declare function fetchEmbase(query: string, maxResults: number, injectedApiKey?: string): Promise<LiteratureResult[]>;
 //# sourceMappingURL=embase.d.ts.map

package/dist/providers/direct/embase.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"embase.d.ts","sourceRoot":"","sources":["../../../src/providers/direct/embase.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAwBpD,wBAAsB,WAAW,CAC/B,KAAK,EAAE,MAAM,EACb,UAAU,EAAE,MAAM,EAClB,cAAc,CAAC,EAAE,MAAM,GACtB,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAqD7B"}
+{"version":3,"file":"embase.d.ts","sourceRoot":"","sources":["../../../src/providers/direct/embase.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAYpD;;;;;;;;;;;;GAYG;AACH,wBAAgB,gBAAgB,CAAC,GAAG,EAAE,MAAM,GAAG;IAC7C,OAAO,EAAE,MAAM,CAAC;IAChB,QAAQ,EAAE,MAAM,EAAE,CAAC;CACpB,CAYA;AAoBD,wBAAsB,WAAW,CAC/B,KAAK,EAAE,MAAM,EACb,UAAU,EAAE,MAAM,EAClB,cAAc,CAAC,EAAE,MAAM,GACtB,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAwD7B"}

package/dist/providers/direct/embase.js

@@ -1,10 +1,45 @@
 // EMBASE records are indexed in Scopus and accessed via the Scopus Search API
 // with dbId=embase. The standalone /content/search/embase endpoint returns 404.
 const BASE = "https://api.elsevier.com/content/search/scopus";
+// Database names that users/models sometimes append to queries but which kill
+// Scopus results (Scopus treats all terms as mandatory AND — "EMBASE" in the
+// query means the paper must contain the word "EMBASE").
+const DB_NAME_PATTERN = /\b(embase|pubmed|scopus|medline|cinahl|cochrane|sciencedirect|web\s+of\s+science)\b/gi;
+/**
+ * Sanitise a raw search query before sending it to the Scopus free-text
+ * search endpoint.  The Scopus translator returns 400 "Error translating
+ * query" when it encounters:
+ *   - parentheses / curly- / square-brackets (grouping syntax it can't parse
+ *     in free-text mode), e.g. `tirzepatide (obesity OR overweight)`
+ *   - bare boolean operators adjacent to terms
+ *   - field-prefix punctuation such as TITLE:"…"
+ *
+ * Reduction to a flat space-separated term list — which Scopus treats as
+ * implicit AND — is the most reliable strategy.  Wildcards (* ?) are
+ * intentionally preserved.
+ */
+export function cleanScopusQuery(raw) {
+    const stripped = [];
+    const cleaned = raw
+        .replace(DB_NAME_PATTERN, (match) => {
+        stripped.push(match.toLowerCase());
+        return "";
+    })
+        .replace(/[(){}[\]:"']/g, " ") // grouping / field-prefix / quote chars
+        .replace(/\b(?:AND|OR|NOT)\b/gi, " ") // bare boolean operators
+        .replace(/\s{2,}/g, " ")
+        .trim();
+    return { cleaned, stripped: [...new Set(stripped)] };
+}
 export async function fetchEmbase(query, maxResults, injectedApiKey) {
     const apiKey = injectedApiKey ?? process.env.ELSEVIER_API_KEY;
     if (!apiKey)
         return [];
+    // Sanitise the query before sending to Scopus.  Parentheses, bare boolean
+    // operators, and field-prefix punctuation cause Scopus to return
+    // 400 "Error translating query".  Reduce to a flat term list so errors
+    // are never silently swallowed by the outer catch in the dispatcher.
+    const { cleaned: cleanedQuery } = cleanScopusQuery(query);
     const instToken = process.env.ELSEVIER_INST_TOKEN;
     const headers = {
         "X-ELS-APIKey": apiKey,
@@ -12,44 +47,42 @@ export async function fetchEmbase(query, maxResults, injectedApiKey) {
     };
     if (instToken)
         headers["X-ELS-Insttoken"] = instToken;
-    try {
-        const params = new URLSearchParams({
-            query,
-            count: String(maxResults),
-            dbId: "embase",
-            field: "title,creator,publicationName,coverDate,description,doi,subtypeDescription,link",
-        });
-        const res = await fetch(`${BASE}?${params}`, {
-            headers,
-            signal: AbortSignal.timeout(15_000),
-        });
-        if (!res.ok) {
-            const body = await res.text().catch(() => "");
-            throw new Error(`Scopus API ${res.status}: ${body.slice(0, 200)}`);
-        }
-        const data = (await res.json());
-        const entries = data["search-results"]?.entry ?? [];
-        return entries
-            .filter((e) => e["dc:title"])
-            .map((e, i) => {
-            const doi = e["prism:doi"];
-            const scopusLink = e.link?.find((l) => l["@ref"] === "scopus")?.["@href"];
-            const url = doi ? `https://doi.org/${doi}` : (scopusLink ?? "");
-            return {
-                id: `embase_${doi ?? scopusLink ?? i}`,
-                source: "embase",
-                title: e["dc:title"] ?? "",
-                authors: e["dc:creator"] ? [e["dc:creator"]] : [],
-                date: e["prism:coverDate"] ?? "",
-                study_type: mapSubtype(e["subtypeDescription"]),
-                abstract: e["dc:description"] ?? "",
-                url,
-            };
-        });
-    }
-    catch {
-        return [];
+    // No try/catch here — let errors propagate so the dispatcher
+    // (src/providers/direct/index.ts) can record status:"failed" + error
+    // message in the audit trail instead of silently returning [].
+    const params = new URLSearchParams({
+        query: cleanedQuery,
+        count: String(maxResults),
+        dbId: "embase",
+        field: "title,creator,publicationName,coverDate,description,doi,subtypeDescription,link",
+    });
+    const res = await fetch(`${BASE}?${params}`, {
+        headers,
+        signal: AbortSignal.timeout(15_000),
+    });
+    if (!res.ok) {
+        const body = await res.text().catch(() => "");
+        throw new Error(`Scopus API ${res.status}: ${body.slice(0, 200)}`);
     }
+    const data = (await res.json());
+    const entries = data["search-results"]?.entry ?? [];
+    return entries
+        .filter((e) => e["dc:title"])
+        .map((e, i) => {
+        const doi = e["prism:doi"];
+        const scopusLink = e.link?.find((l) => l["@ref"] === "scopus")?.["@href"];
+        const url = doi ? `https://doi.org/${doi}` : (scopusLink ?? "");
+        return {
+            id: `embase_${doi ?? scopusLink ?? i}`,
+            source: "embase",
+            title: e["dc:title"] ?? "",
+            authors: e["dc:creator"] ? [e["dc:creator"]] : [],
+            date: e["prism:coverDate"] ?? "",
+            study_type: mapSubtype(e["subtypeDescription"]),
+            abstract: e["dc:description"] ?? "",
+            url,
+        };
+    });
 }
 function mapSubtype(subtype) {
     if (!subtype)

package/dist/providers/direct/embase.js.map

@@ -1 +1 @@
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+{"version":3,"file":"embase.js","sourceRoot":"","sources":["../../../src/providers/direct/embase.ts"],"names":[],"mappings":"AAEA,8EAA8E;AAC9E,gFAAgF;AAChF,MAAM,IAAI,GAAG,gDAAgD,CAAC;AAE9D,8EAA8E;AAC9E,6EAA6E;AAC7E,yDAAyD;AACzD,MAAM,eAAe,GACnB,uFAAuF,CAAC;AAE1F;;;;;;;;;;;;GAYG;AACH,MAAM,UAAU,gBAAgB,CAAC,GAAW;IAI1C,MAAM,QAAQ,GAAa,EAAE,CAAC;IAC9B,MAAM,OAAO,GAAG,GAAG;SAChB,OAAO,CAAC,eAAe,EAAE,CAAC,KAAK,EAAE,EAAE;QAClC,QAAQ,CAAC,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,CAAC,CAAC;QACnC,OAAO,EAAE,CAAC;IACZ,CAAC,CAAC;SACD,OAAO,CAAC,eAAe,EAAE,GAAG,CAAC,CAAC,wCAAwC;SACtE,OAAO,CAAC,sBAAsB,EAAE,GAAG,CAAC,CAAC,yBAAyB;SAC9D,OAAO,CAAC,SAAS,EAAE,GAAG,CAAC;SACvB,IAAI,EAAE,CAAC;IACV,OAAO,EAAE,OAAO,EAAE,QAAQ,EAAE,CAAC,GAAG,IAAI,GAAG,CAAC,QAAQ,CAAC,CAAC,EAAE,CAAC;AACvD,CAAC;AAoBD,MAAM,CAAC,KAAK,UAAU,WAAW,CAC/B,KAAa,EACb,UAAkB,EAClB,cAAuB;IAEvB,MAAM,MAAM,GAAG,cAAc,IAAI,OAAO,CAAC,GAAG,CAAC,gBAAgB,CAAC;IAC9D,IAAI,CAAC,MAAM;QAAE,OAAO,EAAE,CAAC;IAEvB,0EAA0E;IAC1E,iEAAiE;IACjE,uEAAuE;IACvE,qEAAqE;IACrE,MAAM,EAAE,OAAO,EAAE,YAAY,EAAE,GAAG,gBAAgB,CAAC,KAAK,CAAC,CAAC;IAE1D,MAAM,SAAS,GAAG,OAAO,CAAC,GAAG,CAAC,mBAAmB,CAAC;IAClD,MAAM,OAAO,GAA2B;QACtC,cAAc,EAAE,MAAM;QACtB,MAAM,EAAE,kBAAkB;KAC3B,CAAC;IACF,IAAI,SAAS;QAAE,OAAO,CAAC,iBAAiB,CAAC,GAAG,SAAS,CAAC;IAEtD,6DAA6D;IAC7D,qEAAqE;IACrE,+DAA+D;IAC/D,MAAM,MAAM,GAAG,IAAI,eAAe,CAAC;QACjC,KAAK,EAAE,YAAY;QACnB,KAAK,EAAE,MAAM,CAAC,UAAU,CAAC;QACzB,IAAI,EAAE,QAAQ;QACd,KAAK,EACH,iFAAiF;KACpF,CAAC,CAAC;IACH,MAAM,GAAG,GAAG,MAAM,KAAK,CAAC,GAAG,IAAI,IAAI,MAAM,EAAE,EAAE;QAC3C,OAAO;QACP,MAAM,EAAE,WAAW,CAAC,OAAO,CAAC,MAAM,CAAC;KACpC,CAAC,CAAC;IACH,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC;QACZ,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,IAAI,EAAE,CAAC,KAAK,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC;QAC9C,MAAM,IAAI,KAAK,CAAC,cAAc,GAAG,CAAC,MAAM,KAAK,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,GAAG,CAAC,EAAE,CAAC,CAAC;IACrE,CAAC;IAED,MAAM,IAAI,GAAG,CAAC,MAAM,GAAG,CAAC,IAAI,EAAE,CAAmB,CAAC;IAClD,MAAM,OAAO,GAAG,IAAI,CAAC,gBAAgB,CAAC,EAAE,KAAK,IAAI,EAAE,CAAC;IAEpD,OAAO,OAAO;SACX,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC;SAC5B,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE;QACZ,MAAM,GAAG,GAAG,CAAC,CAAC,WAAW,CAAC,CAAC;QAC3B,MAAM,UAAU,GAAG,CAAC,CAAC,IAAI,EAAE,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,QAAQ,CAAC,EAAE,CAAC,OAAO,CAAC,CAAC;QAC1E,MAAM,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,mBAAmB,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC,UAAU,IAAI,EAAE,CAAC,CAAC;QAChE,OAAO;YACL,EAAE,EAAE,UAAU,GAAG,IAAI,UAAU,IAAI,CAAC,EAAE;YACtC,MAAM,EAAE,QAAiB;YACzB,KAAK,EAAE,CAAC,CAAC,UAAU,CAAC,IAAI,EAAE;YAC1B,OAAO,EAAE,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE;YACjD,IAAI,EAAE,CAAC,CAAC,iBAAiB,CAAC,IAAI,EAAE;YAChC,UAAU,EAAE,UAAU,CAAC,CAAC,CAAC,oBAAoB,CAAC,CAAC;YAC/C,QAAQ,EAAE,CAAC,CAAC,gBAAgB,CAAC,IAAI,EAAE;YACnC,GAAG;SACJ,CAAC;IACJ,CAAC,CAAC,CAAC;AACP,CAAC;AAED,SAAS,UAAU,CAAC,OAAgB;IAClC,IAAI,CAAC,OAAO;QAAE,OAAO,SAAS,CAAC;IAC/B,MAAM,CAAC,GAAG,OAAO,CAAC,WAAW,EAAE,CAAC;IAChC,IAAI,CAAC,CAAC,QAAQ,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,QAAQ,CAAC,MAAM,CAAC;QAAE,OAAO,QAAQ,CAAC;IAChE,IAAI,CAAC,CAAC,QAAQ,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,QAAQ,CAAC,YAAY,CAAC;QAAE,OAAO,KAAK,CAAC;IACvE,IAAI,CAAC,CAAC,QAAQ,CAAC,eAAe,CAAC,IAAI,CAAC,CAAC,QAAQ,CAAC,QAAQ,CAAC;QACrD,OAAO,eAAe,CAAC;IACzB,OAAO,SAAS,CAAC;AACnB,CAAC"}

package/dist/providers/direct/googleScholar.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"googleScholar.d.ts","sourceRoot":"","sources":["../../../src/providers/direct/googleScholar.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAqBpD,wBAAsB,kBAAkB,CACtC,KAAK,EAAE,MAAM,EACb,UAAU,EAAE,MAAM,GACjB,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAsC7B"}
+{"version":3,"file":"googleScholar.d.ts","sourceRoot":"","sources":["../../../src/providers/direct/googleScholar.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAqBpD,wBAAsB,kBAAkB,CACtC,KAAK,EAAE,MAAM,EACb,UAAU,EAAE,MAAM,GACjB,OAAO,CAAC,gBAAgB,EAAE,CAAC,CA6C7B"}

package/dist/providers/direct/googleScholar.js

@@ -3,41 +3,47 @@ export async function fetchGoogleScholar(query, maxResults) {
     const apiKey = process.env.SERPAPI_KEY;
     if (!apiKey)
         return [];
-    try {
-        const url = `${BASE}?engine=google_scholar&q=${encodeURIComponent(query)}&num=${Math.min(maxResults, 20)}&api_key=${apiKey}`;
-        const res = await fetch(url, { signal: AbortSignal.timeout(15_000) });
-        if (!res.ok)
-            return [];
-        const data = (await res.json());
-        if (data.error || !data.organic_results)
-            return [];
-        return data.organic_results.slice(0, maxResults).map((r, i) => {
-            const authors = r.publication_info?.authors?.map((a) => a.name) ?? [];
-            const pubSummary = r.publication_info?.summary ?? "";
-            // pub summary often: "A Smith, B Jones - Journal Name, 2023 - publisher.com"
-            const yearMatch = pubSummary.match(/\b(19|20)\d{2}\b/);
-            return {
-                id: `gscholar_${r.result_id ?? i}`,
-                source: "google_scholar",
-                title: r.title ?? "Untitled",
-                authors,
-                date: yearMatch ? yearMatch[0] : "",
-                study_type: "unknown",
-                abstract: [
-                    r.snippet ?? "",
-                    pubSummary ? `Publication: ${pubSummary}` : null,
-                    r.inline_links?.cited_by?.total
-                        ? `Cited by: ${r.inline_links.cited_by.total}`
-                        : null,
-                ]
-                    .filter(Boolean)
-                    .join(" | "),
-                url: r.link ?? "",
-            };
-        });
+    const params = new URLSearchParams({
+        engine: "google_scholar",
+        q: query,
+        num: String(Math.min(maxResults, 20)),
+        api_key: apiKey,
+    });
+    const res = await fetch(`${BASE}?${params}`, {
+        signal: AbortSignal.timeout(15_000),
+    });
+    if (!res.ok) {
+        const body = await res.text().catch(() => "");
+        throw new Error(`SerpAPI ${res.status}: ${body.slice(0, 200)}`);
     }
-    catch {
+    const data = (await res.json());
+    if (data.error)
+        throw new Error(`SerpAPI error: ${data.error}`);
+    if (!data.organic_results)
         return [];
-    }
+    return data.organic_results.slice(0, maxResults).map((r, i) => {
+        const authors = r.publication_info?.authors?.map((a) => a.name) ?? [];
+        const pubSummary = r.publication_info?.summary ?? "";
+        // pub summary often: "A Smith, B Jones - Journal Name, 2023 - publisher.com"
+        const yearMatch = pubSummary.match(/\b(19|20)\d{2}\b/);
+        return {
+            id: `gscholar_${r.result_id ?? i}`,
+            source: "google_scholar",
+            title: r.title ?? "Untitled",
+            authors,
+            date: yearMatch ? yearMatch[0] : "",
+            study_type: "unknown",
+            abstract: [
+                r.snippet ?? "",
+                pubSummary ? `Publication: ${pubSummary}` : null,
+                r.inline_links?.cited_by?.total
+                    ? `Cited by: ${r.inline_links.cited_by.total}`
+                    : null,
+            ]
+                .filter(Boolean)
+                .join(" | "),
+            url: r.link ?? "",
+        };
+    });
 }
 //# sourceMappingURL=googleScholar.js.map

package/dist/providers/direct/googleScholar.js.map

@@ -1 +1 @@
-{"version":3,"file":"googleScholar.js","sourceRoot":"","sources":["../../../src/providers/direct/googleScholar.ts"],"names":[],"mappings":"AAEA,MAAM,IAAI,GAAG,4BAA4B,CAAC;AAmB1C,MAAM,CAAC,KAAK,UAAU,kBAAkB,CACtC,KAAa,EACb,UAAkB;IAElB,MAAM,MAAM,GAAG,OAAO,CAAC,GAAG,CAAC,WAAW,CAAC;IACvC,IAAI,CAAC,MAAM;QAAE,OAAO,EAAE,CAAC;IAEvB,IAAI,CAAC;QACH,MAAM,GAAG,GAAG,GAAG,IAAI,4BAA4B,kBAAkB,CAAC,KAAK,CAAC,QAAQ,IAAI,CAAC,GAAG,CAAC,UAAU,EAAE,EAAE,CAAC,YAAY,MAAM,EAAE,CAAC;QAC7H,MAAM,GAAG,GAAG,MAAM,KAAK,CAAC,GAAG,EAAE,EAAE,MAAM,EAAE,WAAW,CAAC,OAAO,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;QACtE,IAAI,CAAC,GAAG,CAAC,EAAE;YAAE,OAAO,EAAE,CAAC;QACvB,MAAM,IAAI,GAAG,CAAC,MAAM,GAAG,CAAC,IAAI,EAAE,CAAoB,CAAC;QACnD,IAAI,IAAI,CAAC,KAAK,IAAI,CAAC,IAAI,CAAC,eAAe;YAAE,OAAO,EAAE,CAAC;QAEnD,OAAO,IAAI,CAAC,eAAe,CAAC,KAAK,CAAC,CAAC,EAAE,UAAU,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE;YAC5D,MAAM,OAAO,GAAG,CAAC,CAAC,gBAAgB,EAAE,OAAO,EAAE,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,EAAE,CAAC;YACtE,MAAM,UAAU,GAAG,CAAC,CAAC,gBAAgB,EAAE,OAAO,IAAI,EAAE,CAAC;YACrD,6EAA6E;YAC7E,MAAM,SAAS,GAAG,UAAU,CAAC,KAAK,CAAC,kBAAkB,CAAC,CAAC;YACvD,OAAO;gBACL,EAAE,EAAE,YAAY,CAAC,CAAC,SAAS,IAAI,CAAC,EAAE;gBAClC,MAAM,EAAE,gBAAyB;gBACjC,KAAK,EAAE,CAAC,CAAC,KAAK,IAAI,UAAU;gBAC5B,OAAO;gBACP,IAAI,EAAE,SAAS,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE;gBACnC,UAAU,EAAE,SAAS;gBACrB,QAAQ,EAAE;oBACR,CAAC,CAAC,OAAO,IAAI,EAAE;oBACf,UAAU,CAAC,CAAC,CAAC,gBAAgB,UAAU,EAAE,CAAC,CAAC,CAAC,IAAI;oBAChD,CAAC,CAAC,YAAY,EAAE,QAAQ,EAAE,KAAK;wBAC7B,CAAC,CAAC,aAAa,CAAC,CAAC,YAAY,CAAC,QAAQ,CAAC,KAAK,EAAE;wBAC9C,CAAC,CAAC,IAAI;iBACT;qBACE,MAAM,CAAC,OAAO,CAAC;qBACf,IAAI,CAAC,KAAK,CAAC;gBACd,GAAG,EAAE,CAAC,CAAC,IAAI,IAAI,EAAE;aAClB,CAAC;QACJ,CAAC,CAAC,CAAC;IACL,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,EAAE,CAAC;IACZ,CAAC;AACH,CAAC"}
+{"version":3,"file":"googleScholar.js","sourceRoot":"","sources":["../../../src/providers/direct/googleScholar.ts"],"names":[],"mappings":"AAEA,MAAM,IAAI,GAAG,4BAA4B,CAAC;AAmB1C,MAAM,CAAC,KAAK,UAAU,kBAAkB,CACtC,KAAa,EACb,UAAkB;IAElB,MAAM,MAAM,GAAG,OAAO,CAAC,GAAG,CAAC,WAAW,CAAC;IACvC,IAAI,CAAC,MAAM;QAAE,OAAO,EAAE,CAAC;IAEvB,MAAM,MAAM,GAAG,IAAI,eAAe,CAAC;QACjC,MAAM,EAAE,gBAAgB;QACxB,CAAC,EAAE,KAAK;QACR,GAAG,EAAE,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,UAAU,EAAE,EAAE,CAAC,CAAC;QACrC,OAAO,EAAE,MAAM;KAChB,CAAC,CAAC;IACH,MAAM,GAAG,GAAG,MAAM,KAAK,CAAC,GAAG,IAAI,IAAI,MAAM,EAAE,EAAE;QAC3C,MAAM,EAAE,WAAW,CAAC,OAAO,CAAC,MAAM,CAAC;KACpC,CAAC,CAAC;IACH,IAAI,CAAC,GAAG,CAAC,EAAE,EAAE,CAAC;QACZ,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,IAAI,EAAE,CAAC,KAAK,CAAC,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC;QAC9C,MAAM,IAAI,KAAK,CAAC,WAAW,GAAG,CAAC,MAAM,KAAK,IAAI,CAAC,KAAK,CAAC,CAAC,EAAE,GAAG,CAAC,EAAE,CAAC,CAAC;IAClE,CAAC;IACD,MAAM,IAAI,GAAG,CAAC,MAAM,GAAG,CAAC,IAAI,EAAE,CAAoB,CAAC;IACnD,IAAI,IAAI,CAAC,KAAK;QAAE,MAAM,IAAI,KAAK,CAAC,kBAAkB,IAAI,CAAC,KAAK,EAAE,CAAC,CAAC;IAChE,IAAI,CAAC,IAAI,CAAC,eAAe;QAAE,OAAO,EAAE,CAAC;IAErC,OAAO,IAAI,CAAC,eAAe,CAAC,KAAK,CAAC,CAAC,EAAE,UAAU,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE;QAC5D,MAAM,OAAO,GAAG,CAAC,CAAC,gBAAgB,EAAE,OAAO,EAAE,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,EAAE,CAAC;QACtE,MAAM,UAAU,GAAG,CAAC,CAAC,gBAAgB,EAAE,OAAO,IAAI,EAAE,CAAC;QACrD,6EAA6E;QAC7E,MAAM,SAAS,GAAG,UAAU,CAAC,KAAK,CAAC,kBAAkB,CAAC,CAAC;QACvD,OAAO;YACL,EAAE,EAAE,YAAY,CAAC,CAAC,SAAS,IAAI,CAAC,EAAE;YAClC,MAAM,EAAE,gBAAyB;YACjC,KAAK,EAAE,CAAC,CAAC,KAAK,IAAI,UAAU;YAC5B,OAAO;YACP,IAAI,EAAE,SAAS,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE;YACnC,UAAU,EAAE,SAAS;YACrB,QAAQ,EAAE;gBACR,CAAC,CAAC,OAAO,IAAI,EAAE;gBACf,UAAU,CAAC,CAAC,CAAC,gBAAgB,UAAU,EAAE,CAAC,CAAC,CAAC,IAAI;gBAChD,CAAC,CAAC,YAAY,EAAE,QAAQ,EAAE,KAAK;oBAC7B,CAAC,CAAC,aAAa,CAAC,CAAC,YAAY,CAAC,QAAQ,CAAC,KAAK,EAAE;oBAC9C,CAAC,CAAC,IAAI;aACT;iBACE,MAAM,CAAC,OAAO,CAAC;iBACf,IAAI,CAAC,KAAK,CAAC;YACd,GAAG,EAAE,CAAC,CAAC,IAAI,IAAI,EAAE;SAClB,CAAC;IACJ,CAAC,CAAC,CAAC;AACL,CAAC"}

package/dist/providers/direct/pubmed.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"pubmed.d.ts","sourceRoot":"","sources":["../../../src/providers/direct/pubmed.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AA6BpD,wBAAsB,WAAW,CAC/B,KAAK,EAAE,MAAM,EACb,UAAU,EAAE,MAAM,GACjB,OAAO,CAAC,gBAAgB,EAAE,CAAC,CA8D7B"}