helixmind 0.7.1 → 0.8.0

package/dist/cli/agent/tools/git-exec.js

@@ -0,0 +1,56 @@
+import { execFileSync } from 'node:child_process';
+/**
+ * Default timeout for git invocations from agent tools. Hung pre-commit
+ * hooks, network-backed `git status` on large repos, or commit-msg hooks
+ * waiting on stdin previously froze the entire agent loop synchronously.
+ *
+ * 30 seconds is generous enough for a slow checkout + commit on a large
+ * repository, and short enough that an actually-stuck process surfaces as
+ * a tool error within one human attention span.
+ */
+export const DEFAULT_GIT_TIMEOUT_MS = 30_000;
+/**
+ * Execute a git command synchronously with a hard timeout, EOF stdin, and
+ * captured stdout. Returns the stdout as utf-8 text.
+ *
+ * Callers MUST pass git arguments as an array (no shell). This avoids
+ * command injection via tool inputs that get spliced into a shell string.
+ *
+ * On timeout: throws an Error whose message starts with "git timeout:" so
+ * tool implementations can surface it cleanly to the agent.
+ */
+export function gitExec(args, cwd, opts = {}) {
+    const timeoutMs = opts.timeoutMs ?? DEFAULT_GIT_TIMEOUT_MS;
+    try {
+        const out = execFileSync('git', args, {
+            cwd,
+            encoding: 'utf-8',
+            stdio: ['pipe', 'pipe', 'pipe'],
+            timeout: timeoutMs,
+            maxBuffer: opts.maxBufferBytes ?? 8 * 1024 * 1024,
+            input: opts.input ?? '',
+            // Inherit a minimal env; explicitly set GIT_TERMINAL_PROMPT=0 so a
+            // credential prompt cannot block. Hooks are still run by default;
+            // operators who want to skip them can set GIT_HOOKS=0 themselves.
+            env: {
+                ...process.env,
+                GIT_TERMINAL_PROMPT: '0',
+            },
+        });
+        return typeof out === 'string' ? out : out.toString('utf-8');
+    }
+    catch (err) {
+        const e = err;
+        if (e.signal === 'SIGTERM' || e.code === 'ETIMEDOUT') {
+            throw new Error(`git timeout: 'git ${args.join(' ')}' exceeded ${timeoutMs}ms in ${cwd}`);
+        }
+        // Surface git's stderr when present — most useful diagnostic.
+        const stderr = e.stderr
+            ? (typeof e.stderr === 'string' ? e.stderr : e.stderr.toString('utf-8')).trim()
+            : '';
+        if (stderr)
+            throw new Error(`git error: ${stderr}`);
+        throw err;
+    }
+}
+//# sourceMappingURL=git-exec.js.map

package/dist/cli/agent/tools/git-exec.js.map

@@ -0,0 +1 @@
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package/dist/cli/agent/tools/git-log.js

@@ -1,5 +1,5 @@
-import { execFileSync } from 'node:child_process';
 import { registerTool } from './registry.js';
+import { gitExec } from './git-exec.js';
 registerTool({
     definition: {
         name: 'git_log',
@@ -15,7 +15,7 @@ registerTool({
     },
     async execute(input, ctx) {
         try {
-            execFileSync('git', ['rev-parse', '--is-inside-work-tree'], { cwd: ctx.executionRoot, encoding: 'utf-8', stdio: 'pipe' });
+            gitExec(['rev-parse', '--is-inside-work-tree'], ctx.executionRoot);
         }
         catch {
             return `Not a git repository. The current directory (${ctx.executionRoot}) is not tracked by git.`;
@@ -23,18 +23,17 @@ registerTool({
         try {
             const rawCount = Number(input.count);
             const count = Number.isInteger(rawCount) && rawCount > 0 && rawCount <= 100 ? rawCount : 10;
-            // Use execFileSync to prevent shell injection via file paths
             const args = ['log', `-${count}`, '--format=%h  %s  (%ar)  <%an>'];
             if (input.file)
                 args.push('--', String(input.file));
-            const log = execFileSync('git', args, { cwd: ctx.executionRoot, encoding: 'utf-8' }).trim();
+            const log = gitExec(args, ctx.executionRoot).trim();
             if (!log) {
                 return 'No commits found.';
             }
             return `Recent commits:\n\n${log}`;
         }
         catch (err) {
-            return `Error: ${err}`;
+            return `Error: ${err instanceof Error ? err.message : String(err)}`;
         }
     },
 });

package/dist/cli/agent/tools/git-log.js.map

@@ -1 +1 @@
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+{"version":3,"file":"git-log.js","sourceRoot":"","sources":["../../../../src/cli/agent/tools/git-log.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,YAAY,EAAE,MAAM,eAAe,CAAC;AAC7C,OAAO,EAAE,OAAO,EAAE,MAAM,eAAe,CAAC;AAExC,YAAY,CAAC;IACX,UAAU,EAAE;QACV,IAAI,EAAE,SAAS;QACf,WAAW,EAAE,sEAAsE;QACnF,YAAY,EAAE;YACZ,IAAI,EAAE,QAAQ;YACd,UAAU,EAAE;gBACV,KAAK,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,EAAE,yCAAyC,EAAE;gBACjF,IAAI,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,EAAE,6CAA6C,EAAE;aACrF;YACD,QAAQ,EAAE,EAAE;SACb;KACF;IAED,KAAK,CAAC,OAAO,CAAC,KAAK,EAAE,GAAG;QACtB,IAAI,CAAC;YACH,OAAO,CAAC,CAAC,WAAW,EAAE,uBAAuB,CAAC,EAAE,GAAG,CAAC,aAAa,CAAC,CAAC;QACrE,CAAC;QAAC,MAAM,CAAC;YACP,OAAO,gDAAgD,GAAG,CAAC,aAAa,0BAA0B,CAAC;QACrG,CAAC;QAED,IAAI,CAAC;YACH,MAAM,QAAQ,GAAG,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC,CAAC;YACrC,MAAM,KAAK,GAAG,MAAM,CAAC,SAAS,CAAC,QAAQ,CAAC,IAAI,QAAQ,GAAG,CAAC,IAAI,QAAQ,IAAI,GAAG,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC;YAC5F,MAAM,IAAI,GAAG,CAAC,KAAK,EAAE,IAAI,KAAK,EAAE,EAAE,+BAA+B,CAAC,CAAC;YACnE,IAAI,KAAK,CAAC,IAAI;gBAAE,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,MAAM,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC;YAEpD,MAAM,GAAG,GAAG,OAAO,CAAC,IAAI,EAAE,GAAG,CAAC,aAAa,CAAC,CAAC,IAAI,EAAE,CAAC;YAEpD,IAAI,CAAC,GAAG,EAAE,CAAC;gBACT,OAAO,mBAAmB,CAAC;YAC7B,CAAC;YAED,OAAO,sBAAsB,GAAG,EAAE,CAAC;QACrC,CAAC;QAAC,OAAO,GAAG,EAAE,CAAC;YACb,OAAO,UAAU,GAAG,YAAY,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC;QACtE,CAAC;IACH,CAAC;CACF,CAAC,CAAC"}

package/dist/cli/agent/tools/git-status.js

@@ -1,5 +1,5 @@
-import { execSync } from 'node:child_process';
 import { registerTool } from './registry.js';
+import { gitExec } from './git-exec.js';
 registerTool({
     definition: {
         name: 'git_status',
@@ -13,19 +13,19 @@ registerTool({
     async execute(_input, ctx) {
         // Quick check: is this a git repository?
         try {
-            execSync('git rev-parse --is-inside-work-tree', { cwd: ctx.executionRoot, encoding: 'utf-8', stdio: 'pipe' });
+            gitExec(['rev-parse', '--is-inside-work-tree'], ctx.executionRoot);
         }
         catch {
             return `Not a git repository. The current directory (${ctx.executionRoot}) is not tracked by git. Use \`git init\` to initialize one, or navigate to a project that uses git.`;
         }
         try {
-            const branch = execSync('git branch --show-current', { cwd: ctx.executionRoot, encoding: 'utf-8', stdio: 'pipe' }).trim();
-            const status = execSync('git status --short', { cwd: ctx.executionRoot, encoding: 'utf-8', stdio: 'pipe' }).trim();
+            const branch = gitExec(['branch', '--show-current'], ctx.executionRoot).trim();
+            const status = gitExec(['status', '--short'], ctx.executionRoot).trim();
             let ahead = '0';
             let behind = '0';
             try {
-                ahead = execSync('git rev-list --count @{upstream}..HEAD', { cwd: ctx.executionRoot, encoding: 'utf-8', stdio: 'pipe' }).trim();
-                behind = execSync('git rev-list --count HEAD..@{upstream}', { cwd: ctx.executionRoot, encoding: 'utf-8', stdio: 'pipe' }).trim();
+                ahead = gitExec(['rev-list', '--count', '@{upstream}..HEAD'], ctx.executionRoot).trim();
+                behind = gitExec(['rev-list', '--count', 'HEAD..@{upstream}'], ctx.executionRoot).trim();
             }
             catch {
                 // No upstream configured — skip ahead/behind

package/dist/cli/agent/tools/git-status.js.map

@@ -1 +1 @@
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+{"version":3,"file":"git-status.js","sourceRoot":"","sources":["../../../../src/cli/agent/tools/git-status.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,YAAY,EAAE,MAAM,eAAe,CAAC;AAC7C,OAAO,EAAE,OAAO,EAAE,MAAM,eAAe,CAAC;AAExC,YAAY,CAAC;IACX,UAAU,EAAE;QACV,IAAI,EAAE,YAAY;QAClB,WAAW,EAAE,8FAA8F;QAC3G,YAAY,EAAE;YACZ,IAAI,EAAE,QAAQ;YACd,UAAU,EAAE,EAAE;YACd,QAAQ,EAAE,EAAE;SACb;KACF;IAED,KAAK,CAAC,OAAO,CAAC,MAAM,EAAE,GAAG;QACvB,yCAAyC;QACzC,IAAI,CAAC;YACH,OAAO,CAAC,CAAC,WAAW,EAAE,uBAAuB,CAAC,EAAE,GAAG,CAAC,aAAa,CAAC,CAAC;QACrE,CAAC;QAAC,MAAM,CAAC;YACP,OAAO,gDAAgD,GAAG,CAAC,aAAa,sGAAsG,CAAC;QACjL,CAAC;QAED,IAAI,CAAC;YACH,MAAM,MAAM,GAAG,OAAO,CAAC,CAAC,QAAQ,EAAE,gBAAgB,CAAC,EAAE,GAAG,CAAC,aAAa,CAAC,CAAC,IAAI,EAAE,CAAC;YAC/E,MAAM,MAAM,GAAG,OAAO,CAAC,CAAC,QAAQ,EAAE,SAAS,CAAC,EAAE,GAAG,CAAC,aAAa,CAAC,CAAC,IAAI,EAAE,CAAC;YAExE,IAAI,KAAK,GAAG,GAAG,CAAC;YAChB,IAAI,MAAM,GAAG,GAAG,CAAC;YACjB,IAAI,CAAC;gBACH,KAAK,GAAG,OAAO,CAAC,CAAC,UAAU,EAAE,SAAS,EAAE,mBAAmB,CAAC,EAAE,GAAG,CAAC,aAAa,CAAC,CAAC,IAAI,EAAE,CAAC;gBACxF,MAAM,GAAG,OAAO,CAAC,CAAC,UAAU,EAAE,SAAS,EAAE,mBAAmB,CAAC,EAAE,GAAG,CAAC,aAAa,CAAC,CAAC,IAAI,EAAE,CAAC;YAC3F,CAAC;YAAC,MAAM,CAAC;gBACP,6CAA6C;YAC/C,CAAC;YAED,IAAI,MAAM,GAAG,WAAW,MAAM,EAAE,CAAC;YACjC,IAAI,KAAK,KAAK,GAAG;gBAAE,MAAM,IAAI,KAAK,KAAK,SAAS,CAAC;YACjD,IAAI,MAAM,KAAK,GAAG;gBAAE,MAAM,IAAI,KAAK,MAAM,UAAU,CAAC;YACpD,MAAM,IAAI,IAAI,CAAC;YAEf,IAAI,MAAM,EAAE,CAAC;gBACX,MAAM,IAAI,eAAe,MAAM,EAAE,CAAC;YACpC,CAAC;iBAAM,CAAC;gBACN,MAAM,IAAI,sBAAsB,CAAC;YACnC,CAAC;YAED,OAAO,MAAM,CAAC;QAChB,CAAC;QAAC,OAAO,GAAG,EAAE,CAAC;YACb,OAAO,cAAc,GAAG,YAAY,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC;QAC1E,CAAC;IACH,CAAC;CACF,CAAC,CAAC"}

package/dist/cli/agent/tools/registry.d.ts

@@ -25,6 +25,15 @@ export interface ToolContext {
     lockFile?: (path: string) => boolean;
     unlockFile?: (path: string) => void;
     worktree?: WorktreeHandle;
+    /**
+     * audit-009: agent abort signal. Tools that perform long-running I/O
+     * (network requests, browser actions, child processes) should observe
+     * this signal and cancel cleanly when it fires. Tools that don't take
+     * meaningful time may ignore it. The signal is provided by the agent
+     * loop's AgentController; it fires on user ESC, max-iterations, or
+     * external abort (session manager, swarm coordinator).
+     */
+    signal?: AbortSignal;
 }
 export interface ToolHandler {
     definition: ToolDefinition;

package/dist/cli/agent/tools/registry.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"registry.d.ts","sourceRoot":"","sources":["../../../../src/cli/agent/tools/registry.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC/D,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAC5C,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,uBAAuB,CAAC;AACxD,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,6BAA6B,CAAC;AACrE,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,yBAAyB,CAAC;AAC/D,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,0BAA0B,CAAC;AAChE,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,wBAAwB,CAAC;AAC3D,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,yBAAyB,CAAC;AAE9D,MAAM,WAAW,WAAW;IAC1B,WAAW,EAAE,MAAM,CAAC;IACpB,aAAa,EAAE,MAAM,CAAC;IACtB,SAAS,EAAE,SAAS,CAAC;IACrB,YAAY,CAAC,EAAE,GAAG,CAAC;IACnB,UAAU,CAAC,EAAE,UAAU,CAAC;IACxB,iBAAiB,CAAC,EAAE,iBAAiB,CAAC;IACtC,eAAe,CAAC,EAAE,eAAe,CAAC;IAClC,mBAAmB,CAAC,EAAE,CAAC,IAAI,EAAE;QAAE,GAAG,EAAE,MAAM,CAAC;QAAC,KAAK,CAAC,EAAE,MAAM,CAAC;QAAC,WAAW,CAAC,EAAE,MAAM,CAAC;QAAC,QAAQ,CAAC,EAAE,MAAM,CAAA;KAAE,KAAK,IAAI,CAAC;IAC/G,eAAe,CAAC,EAAE,eAAe,CAAC;IAClC,YAAY,CAAC,EAAE,YAAY,CAAC;IAC5B,QAAQ,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC;IACrC,UAAU,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,IAAI,CAAC;IACpC,QAAQ,CAAC,EAAE,cAAc,CAAC;CAC3B;AAED,MAAM,WAAW,WAAW;IAC1B,UAAU,EAAE,cAAc,CAAC;IAC3B,OAAO,EAAE,CAAC,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,GAAG,EAAE,WAAW,KAAK,OAAO,CAAC,MAAM,CAAC,CAAC;CAChF;AAID,wBAAgB,YAAY,CAAC,OAAO,EAAE,WAAW,GAAG,IAAI,CAEvD;AAED,wBAAgB,OAAO,CAAC,IAAI,EAAE,MAAM,GAAG,WAAW,GAAG,SAAS,CAE7D;AAED,wBAAgB,qBAAqB,IAAI,cAAc,EAAE,CAExD;AAED,wBAAgB,eAAe,IAAI,MAAM,EAAE,CAE1C;AAED,2EAA2E;AAC3E,wBAAsB,eAAe,IAAI,OAAO,CAAC,IAAI,CAAC,CAqCrD"}
+{"version":3,"file":"registry.d.ts","sourceRoot":"","sources":["../../../../src/cli/agent/tools/registry.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;AAC/D,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAC5C,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,uBAAuB,CAAC;AACxD,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,6BAA6B,CAAC;AACrE,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,yBAAyB,CAAC;AAC/D,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,0BAA0B,CAAC;AAChE,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,wBAAwB,CAAC;AAC3D,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,yBAAyB,CAAC;AAE9D,MAAM,WAAW,WAAW;IAC1B,WAAW,EAAE,MAAM,CAAC;IACpB,aAAa,EAAE,MAAM,CAAC;IACtB,SAAS,EAAE,SAAS,CAAC;IACrB,YAAY,CAAC,EAAE,GAAG,CAAC;IACnB,UAAU,CAAC,EAAE,UAAU,CAAC;IACxB,iBAAiB,CAAC,EAAE,iBAAiB,CAAC;IACtC,eAAe,CAAC,EAAE,eAAe,CAAC;IAClC,mBAAmB,CAAC,EAAE,CAAC,IAAI,EAAE;QAAE,GAAG,EAAE,MAAM,CAAC;QAAC,KAAK,CAAC,EAAE,MAAM,CAAC;QAAC,WAAW,CAAC,EAAE,MAAM,CAAC;QAAC,QAAQ,CAAC,EAAE,MAAM,CAAA;KAAE,KAAK,IAAI,CAAC;IAC/G,eAAe,CAAC,EAAE,eAAe,CAAC;IAClC,YAAY,CAAC,EAAE,YAAY,CAAC;IAC5B,QAAQ,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC;IACrC,UAAU,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,IAAI,CAAC;IACpC,QAAQ,CAAC,EAAE,cAAc,CAAC;IAC1B;;;;;;;OAOG;IACH,MAAM,CAAC,EAAE,WAAW,CAAC;CACtB;AAED,MAAM,WAAW,WAAW;IAC1B,UAAU,EAAE,cAAc,CAAC;IAC3B,OAAO,EAAE,CAAC,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,GAAG,EAAE,WAAW,KAAK,OAAO,CAAC,MAAM,CAAC,CAAC;CAChF;AAID,wBAAgB,YAAY,CAAC,OAAO,EAAE,WAAW,GAAG,IAAI,CAEvD;AAED,wBAAgB,OAAO,CAAC,IAAI,EAAE,MAAM,GAAG,WAAW,GAAG,SAAS,CAE7D;AAED,wBAAgB,qBAAqB,IAAI,cAAc,EAAE,CAExD;AAED,wBAAgB,eAAe,IAAI,MAAM,EAAE,CAE1C;AAED,2EAA2E;AAC3E,wBAAsB,eAAe,IAAI,OAAO,CAAC,IAAI,CAAC,CAqCrD"}

package/dist/cli/agent/tools/registry.js.map

@@ -1 +1 @@
-{"version":3,"file":"registry.js","sourceRoot":"","sources":["../../../../src/cli/agent/tools/registry.ts"],"names":[],"mappings":"AA8BA,MAAM,KAAK,GAAG,IAAI,GAAG,EAAuB,CAAC;AAE7C,MAAM,UAAU,YAAY,CAAC,OAAoB;IAC/C,KAAK,CAAC,GAAG,CAAC,OAAO,CAAC,UAAU,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC;AAC9C,CAAC;AAED,MAAM,UAAU,OAAO,CAAC,IAAY;IAClC,OAAO,KAAK,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;AACzB,CAAC;AAED,MAAM,UAAU,qBAAqB;IACnC,OAAO,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,MAAM,EAAE,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC;AAC3D,CAAC;AAED,MAAM,UAAU,eAAe;IAC7B,OAAO,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC;AAClC,CAAC;AAED,2EAA2E;AAC3E,MAAM,CAAC,KAAK,UAAU,eAAe;IACnC,qEAAqE;IACrE,MAAM,OAAO,CAAC,GAAG,CAAC;QAChB,MAAM,CAAC,gBAAgB,CAAC;QACxB,MAAM,CAAC,iBAAiB,CAAC;QACzB,MAAM,CAAC,gBAAgB,CAAC;QACxB,MAAM,CAAC,eAAe,CAAC;QACvB,MAAM,CAAC,aAAa,CAAC;QACrB,MAAM,CAAC,WAAW,CAAC;QACnB,MAAM,CAAC,kBAAkB,CAAC;QAC1B,MAAM,CAAC,iBAAiB,CAAC;QACzB,MAAM,CAAC,eAAe,CAAC;QACvB,MAAM,CAAC,iBAAiB,CAAC;QACzB,MAAM,CAAC,cAAc,CAAC;QACtB,MAAM,CAAC,mBAAmB,CAAC;QAC3B,MAAM,CAAC,mBAAmB,CAAC;QAC3B,MAAM,CAAC,mBAAmB,CAAC;QAC3B,MAAM,CAAC,iBAAiB,CAAC;QACzB,MAAM,CAAC,eAAe,CAAC;KACxB,CAAC,CAAC;IAEH,2DAA2D;IAC3D,IAAI,CAAC;QACH,MAAM,OAAO,CAAC,GAAG,CAAC;YAChB,MAAM,CAAC,mBAAmB,CAAC;YAC3B,MAAM,CAAC,uBAAuB,CAAC;YAC/B,MAAM,CAAC,yBAAyB,CAAC;YACjC,MAAM,CAAC,oBAAoB,CAAC;YAC5B,MAAM,CAAC,mBAAmB,CAAC;YAC3B,MAAM,CAAC,oBAAoB,CAAC;SAC7B,CAAC,CAAC;IACL,CAAC;IAAC,MAAM,CAAC;QACP,oEAAoE;QACpE,IAAI,OAAO,CAAC,GAAG,CAAC,KAAK,EAAE,CAAC;YACtB,OAAO,CAAC,KAAK,CAAC,mFAAmF,CAAC,CAAC;QACrG,CAAC;IACH,CAAC;AACH,CAAC"}
+{"version":3,"file":"registry.js","sourceRoot":"","sources":["../../../../src/cli/agent/tools/registry.ts"],"names":[],"mappings":"AAuCA,MAAM,KAAK,GAAG,IAAI,GAAG,EAAuB,CAAC;AAE7C,MAAM,UAAU,YAAY,CAAC,OAAoB;IAC/C,KAAK,CAAC,GAAG,CAAC,OAAO,CAAC,UAAU,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC;AAC9C,CAAC;AAED,MAAM,UAAU,OAAO,CAAC,IAAY;IAClC,OAAO,KAAK,CAAC,GAAG,CAAC,IAAI,CAAC,CAAC;AACzB,CAAC;AAED,MAAM,UAAU,qBAAqB;IACnC,OAAO,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,MAAM,EAAE,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,UAAU,CAAC,CAAC;AAC3D,CAAC;AAED,MAAM,UAAU,eAAe;IAC7B,OAAO,KAAK,CAAC,IAAI,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,CAAC;AAClC,CAAC;AAED,2EAA2E;AAC3E,MAAM,CAAC,KAAK,UAAU,eAAe;IACnC,qEAAqE;IACrE,MAAM,OAAO,CAAC,GAAG,CAAC;QAChB,MAAM,CAAC,gBAAgB,CAAC;QACxB,MAAM,CAAC,iBAAiB,CAAC;QACzB,MAAM,CAAC,gBAAgB,CAAC;QACxB,MAAM,CAAC,eAAe,CAAC;QACvB,MAAM,CAAC,aAAa,CAAC;QACrB,MAAM,CAAC,WAAW,CAAC;QACnB,MAAM,CAAC,kBAAkB,CAAC;QAC1B,MAAM,CAAC,iBAAiB,CAAC;QACzB,MAAM,CAAC,eAAe,CAAC;QACvB,MAAM,CAAC,iBAAiB,CAAC;QACzB,MAAM,CAAC,cAAc,CAAC;QACtB,MAAM,CAAC,mBAAmB,CAAC;QAC3B,MAAM,CAAC,mBAAmB,CAAC;QAC3B,MAAM,CAAC,mBAAmB,CAAC;QAC3B,MAAM,CAAC,iBAAiB,CAAC;QACzB,MAAM,CAAC,eAAe,CAAC;KACxB,CAAC,CAAC;IAEH,2DAA2D;IAC3D,IAAI,CAAC;QACH,MAAM,OAAO,CAAC,GAAG,CAAC;YAChB,MAAM,CAAC,mBAAmB,CAAC;YAC3B,MAAM,CAAC,uBAAuB,CAAC;YAC/B,MAAM,CAAC,yBAAyB,CAAC;YACjC,MAAM,CAAC,oBAAoB,CAAC;YAC5B,MAAM,CAAC,mBAAmB,CAAC;YAC3B,MAAM,CAAC,oBAAoB,CAAC;SAC7B,CAAC,CAAC;IACL,CAAC;IAAC,MAAM,CAAC;QACP,oEAAoE;QACpE,IAAI,OAAO,CAAC,GAAG,CAAC,KAAK,EAAE,CAAC;YACtB,OAAO,CAAC,KAAK,CAAC,mFAAmF,CAAC,CAAC;QACrG,CAAC;IACH,CAAC;AACH,CAAC"}

package/dist/cli/agent/tools/run-command.js

@@ -70,6 +70,28 @@ registerTool({
                 }, 5000);
                 resolve(`Command timed out after ${timeoutSec}s.\n\nPartial stdout:\n${stdout}\n\nPartial stderr:\n${stderr}`);
             }, timeoutSec * 1000);
+            // audit-009: kill the child process when the agent abort signal fires.
+            // Without this, ESC during a long-running run_command (e.g. test suite)
+            // left the child running until its own timeout. SIGTERM first, then
+            // SIGKILL after 2s to give it a chance to clean up subprocesses.
+            const onAbort = () => {
+                try {
+                    proc.kill('SIGTERM');
+                }
+                catch { /* already exited */ }
+                setTimeout(() => {
+                    try {
+                        proc.kill('SIGKILL');
+                    }
+                    catch { /* already exited */ }
+                }, 2000);
+            };
+            if (ctx.signal) {
+                if (ctx.signal.aborted)
+                    onAbort();
+                else
+                    ctx.signal.addEventListener('abort', onAbort, { once: true });
+            }
             const maxBuffer = 5 * 1024 * 1024;
             proc.stdout.on('data', (data) => {
                 const text = data.toString();

package/dist/cli/agent/tools/run-command.js.map

@@ -1 +1 @@
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package/dist/cli/agent/tools/web-research.js

@@ -29,8 +29,10 @@ registerTool({
         try {
             const { webSearch, fetchPageContent } = await import('../../../spiral/cloud/search-provider.js');
             const { extractKnowledge, formatForSpiral } = await import('../../../spiral/cloud/content-extractor.js');
-            // Search the web
-            const searchResults = await webSearch(query, maxResults + 2);
+            // Search the web. audit-009: thread the agent abort signal so a
+            // user pressing ESC during a slow web_research doesn't have to wait
+            // for the request to finish naturally.
+            const searchResults = await webSearch(query, maxResults + 2, ctx.signal);
             if (searchResults.length === 0) {
                 return `No web results found for "${query}". The search may have failed due to network issues.`;
             }
@@ -46,7 +48,9 @@ registerTool({
                 }
                 // Fetch and extract content if enabled
                 if (fetchContent) {
-                    const content = await fetchPageContent(result.url, 8000);
+                    if (ctx.signal?.aborted)
+                        break;
+                    const content = await fetchPageContent(result.url, 8000, ctx.signal);
                     if (content) {
                         const knowledge = extractKnowledge(content, result.url, query);
                         if (knowledge.quality >= 0.3) {

package/dist/cli/agent/tools/web-research.js.map

@@ -1 +1 @@
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package/dist/cli/bugs/journal.d.ts

@@ -2,6 +2,7 @@ import type { BugEntry, BugEvidence, BugStatus } from './types.js';
 export declare class BugJournal {
     private data;
     private filePath;
+    private projectRoot;
     private onChange?;
     constructor(projectRoot: string, onChange?: (event: string, bug: BugEntry) => void);
     private load;
@@ -12,6 +13,16 @@ export declare class BugJournal {
         evidence?: BugEvidence[];
         relatedFiles?: string[];
     }): BugEntry;
+    /**
+     * audit-017: re-check every bug's file hash against the on-disk file.
+     * Bugs whose source has changed get contentStatus='stale'. Called by
+     * bug_list before returning entries to the agent so the LLM sees the
+     * staleness signal alongside the description.
+     *
+     * Persists the updated statuses so the next call is faster (only files
+     * whose mtime suggests a possible change are re-hashed).
+     */
+    refreshStaleness(): void;
     get(id: number): BugEntry | undefined;
     update(id: number, updates: Partial<Pick<BugEntry, 'description' | 'status' | 'file' | 'line' | 'fixDescription'>>): BugEntry | undefined;
     addEvidence(id: number, evidence: BugEvidence): BugEntry | undefined;

package/dist/cli/bugs/journal.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"journal.d.ts","sourceRoot":"","sources":["../../../src/cli/bugs/journal.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,QAAQ,EAAE,WAAW,EAAkB,SAAS,EAAE,MAAM,YAAY,CAAC;AAoBnF,qBAAa,UAAU;IACrB,OAAO,CAAC,IAAI,CAAiB;IAC7B,OAAO,CAAC,QAAQ,CAAS;IACzB,OAAO,CAAC,WAAW,CAAS;IAC5B,OAAO,CAAC,QAAQ,CAAC,CAAyC;gBAE9C,WAAW,EAAE,MAAM,EAAE,QAAQ,CAAC,EAAE,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,EAAE,QAAQ,KAAK,IAAI;IAOlF,OAAO,CAAC,IAAI;IAeZ,OAAO,CAAC,IAAI;IAWZ,MAAM,CAAC,WAAW,EAAE,MAAM,EAAE,IAAI,CAAC,EAAE;QACjC,IAAI,CAAC,EAAE,MAAM,CAAC;QACd,IAAI,CAAC,EAAE,MAAM,CAAC;QACd,QAAQ,CAAC,EAAE,WAAW,EAAE,CAAC;QACzB,YAAY,CAAC,EAAE,MAAM,EAAE,CAAC;KACzB,GAAG,QAAQ;IA6BZ;;;;;;;;OAQG;IACH,gBAAgB,IAAI,IAAI;IAuBxB,GAAG,CAAC,EAAE,EAAE,MAAM,GAAG,QAAQ,GAAG,SAAS;IAIrC,MAAM,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,EAAE,OAAO,CAAC,IAAI,CAAC,QAAQ,EAAE,aAAa,GAAG,QAAQ,GAAG,MAAM,GAAG,MAAM,GAAG,gBAAgB,CAAC,CAAC,GAAG,QAAQ,GAAG,SAAS;IAmBzI,WAAW,CAAC,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,WAAW,GAAG,QAAQ,GAAG,SAAS;IAWpE,cAAc,CAAC,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,GAAG,QAAQ,GAAG,SAAS;IAYlE,SAAS,CAAC,EAAE,EAAE,MAAM,EAAE,cAAc,CAAC,EAAE,MAAM,GAAG,QAAQ,GAAG,SAAS;IAIpE,YAAY,CAAC,EAAE,EAAE,MAAM,GAAG,QAAQ,GAAG,SAAS;IAI9C,WAAW,CAAC,MAAM,EAAE,SAAS,GAAG,QAAQ,EAAE;IAI1C,WAAW,IAAI,QAAQ,EAAE;IAIzB,UAAU,IAAI,QAAQ,EAAE;IAIxB,MAAM,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO;IAS3B,IAAI,KAAK,IAAI,MAAM,CAElB;IAED,IAAI,SAAS,IAAI,MAAM,CAEtB;IAED;;;OAGG;IACH,mBAAmB,IAAI,MAAM,GAAG,IAAI;IAuCpC;;OAEG;IACH,gGAAgG;IAChG,WAAW,CAAC,OAAO,EAAE,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,EAAE,QAAQ,KAAK,IAAI,GAAG,IAAI;IAIlE,aAAa,IAAI,MAAM;CAexB"}

package/dist/cli/bugs/journal.js

@@ -1,11 +1,31 @@
-import { readFileSync, writeFileSync, renameSync, existsSync, mkdirSync } from 'node:fs';
-import { join, dirname } from 'node:path';
+import { readFileSync, writeFileSync, renameSync, existsSync, mkdirSync, statSync } from 'node:fs';
+import { join, dirname, isAbsolute, resolve } from 'node:path';
+import { createHash } from 'node:crypto';
 const EMPTY_DATA = { version: 1, nextId: 1, bugs: [] };
+const BUG_FILE_HASH_CAP_BYTES = 5 * 1024 * 1024;
+/**
+ * audit-017: read a file and return its SHA-256 + mtime, or null if
+ * unreadable / oversized. Mirrors the Spiral Provenance helper so the
+ * staleness semantics are identical between bug journal and spiral.
+ */
+function hashFileForBug(absPath) {
+    try {
+        const stat = statSync(absPath);
+        if (!stat.isFile() || stat.size > BUG_FILE_HASH_CAP_BYTES)
+            return null;
+        return createHash('sha256').update(readFileSync(absPath)).digest('hex');
+    }
+    catch {
+        return null;
+    }
+}
 export class BugJournal {
     data;
     filePath;
+    projectRoot;
     onChange;
     constructor(projectRoot, onChange) {
+        this.projectRoot = projectRoot;
         this.filePath = join(projectRoot, '.helixmind', 'bugs.json');
         this.onChange = onChange;
         this.data = this.load();
@@ -36,6 +56,15 @@ export class BugJournal {
         renameSync(tmpPath, this.filePath);
     }
     create(description, opts) {
+        // audit-017: capture file hash at report time so bug_list can later
+        // detect stale pointers (file refactored, line numbers shifted, etc.)
+        let fileHash;
+        if (opts?.file) {
+            const abs = isAbsolute(opts.file) ? opts.file : resolve(this.projectRoot, opts.file);
+            const h = hashFileForBug(abs);
+            if (h)
+                fileHash = h;
+        }
         const bug = {
             id: this.data.nextId++,
             description,
@@ -46,12 +75,48 @@ export class BugJournal {
             updatedAt: Date.now(),
             evidence: opts?.evidence ?? [],
             relatedFiles: opts?.relatedFiles ?? [],
+            fileHash,
+            contentStatus: fileHash ? 'fresh' : undefined,
         };
         this.data.bugs.push(bug);
         this.save();
         this.onChange?.('bug_created', bug);
         return bug;
     }
+    /**
+     * audit-017: re-check every bug's file hash against the on-disk file.
+     * Bugs whose source has changed get contentStatus='stale'. Called by
+     * bug_list before returning entries to the agent so the LLM sees the
+     * staleness signal alongside the description.
+     *
+     * Persists the updated statuses so the next call is faster (only files
+     * whose mtime suggests a possible change are re-hashed).
+     */
+    refreshStaleness() {
+        let dirty = false;
+        for (const bug of this.data.bugs) {
+            if (!bug.file || !bug.fileHash)
+                continue;
+            if (bug.status === 'verified' || bug.status === 'fixed')
+                continue;
+            const abs = isAbsolute(bug.file) ? bug.file : resolve(this.projectRoot, bug.file);
+            if (!existsSync(abs)) {
+                if (bug.contentStatus !== 'stale') {
+                    bug.contentStatus = 'stale';
+                    dirty = true;
+                }
+                continue;
+            }
+            const current = hashFileForBug(abs);
+            const expected = current === bug.fileHash ? 'fresh' : 'stale';
+            if (bug.contentStatus !== expected) {
+                bug.contentStatus = expected;
+                dirty = true;
+            }
+        }
+        if (dirty)
+            this.save();
+    }
     get(id) {
         return this.data.bugs.find(b => b.id === id);
     }

package/dist/cli/bugs/journal.js.map

@@ -1 +1 @@
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package/dist/cli/bugs/types.d.ts

@@ -18,6 +18,8 @@ export interface BugEntry {
     relatedFiles: string[];
     spiralNodeId?: string;
     fixDescription?: string;
+    fileHash?: string;
+    contentStatus?: 'fresh' | 'stale';
 }
 export interface BugJournalData {
     version: 1;

package/dist/cli/bugs/types.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../src/cli/bugs/types.ts"],"names":[],"mappings":"AAAA,MAAM,MAAM,SAAS,GAAG,MAAM,GAAG,eAAe,GAAG,OAAO,GAAG,UAAU,CAAC;AAExE,MAAM,WAAW,WAAW;IAC1B,IAAI,EAAE,eAAe,GAAG,aAAa,GAAG,aAAa,GAAG,YAAY,GAAG,aAAa,CAAC;IACrF,OAAO,EAAE,MAAM,CAAC;IAChB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,QAAQ;IACvB,EAAE,EAAE,MAAM,CAAC;IACX,WAAW,EAAE,MAAM,CAAC;IACpB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,SAAS,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,QAAQ,EAAE,WAAW,EAAE,CAAC;IACxB,YAAY,EAAE,MAAM,EAAE,CAAC;IACvB,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,cAAc,CAAC,EAAE,MAAM,CAAC;CACzB;AAED,MAAM,WAAW,cAAc;IAC7B,OAAO,EAAE,CAAC,CAAC;IACX,MAAM,EAAE,MAAM,CAAC;IACf,IAAI,EAAE,QAAQ,EAAE,CAAC;CAClB"}
+{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../src/cli/bugs/types.ts"],"names":[],"mappings":"AAAA,MAAM,MAAM,SAAS,GAAG,MAAM,GAAG,eAAe,GAAG,OAAO,GAAG,UAAU,CAAC;AAExE,MAAM,WAAW,WAAW;IAC1B,IAAI,EAAE,eAAe,GAAG,aAAa,GAAG,aAAa,GAAG,YAAY,GAAG,aAAa,CAAC;IACrF,OAAO,EAAE,MAAM,CAAC;IAChB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,QAAQ;IACvB,EAAE,EAAE,MAAM,CAAC;IACX,WAAW,EAAE,MAAM,CAAC;IACpB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,SAAS,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,QAAQ,EAAE,WAAW,EAAE,CAAC;IACxB,YAAY,EAAE,MAAM,EAAE,CAAC;IACvB,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,cAAc,CAAC,EAAE,MAAM,CAAC;IAOxB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAGlB,aAAa,CAAC,EAAE,OAAO,GAAG,OAAO,CAAC;CACnC;AAED,MAAM,WAAW,cAAc;IAC7B,OAAO,EAAE,CAAC,CAAC;IACX,MAAM,EAAE,MAAM,CAAC;IACf,IAAI,EAAE,QAAQ,EAAE,CAAC;CAClB"}

package/dist/cli/commands/chat.d.ts.map

@@ -1 +1 @@
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