hebbian 0.5.3 → 0.7.0

package/dist/constants.d.ts

@@ -23,4 +23,10 @@ export declare const SESSION_STATE_DIR = "hippocampus/session_state";
 export declare const PROTECTED_REGIONS_CONTRA: string[];
 /** Resolve brain root path from flag, env var, or defaults */
 export declare function resolveBrainRoot(brainFlag?: string): string;
+/** Resolve agent-specific brain path within a multi-brain setup */
+export declare function resolveAgentBrain(brainRoot: string, agentName: string): string;
+/** Resolve shared brain path within a multi-brain setup */
+export declare function resolveSharedBrain(brainRoot: string): string;
+export declare const AGENTS_DIR = "agents";
+export declare const SHARED_DIR = "shared";
 //# sourceMappingURL=constants.d.ts.map

package/dist/constants.d.ts.map

@@ -1 +1 @@
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package/dist/digest.d.ts

@@ -1,6 +1,7 @@
 export interface DigestResult {
     corrections: number;
     skipped: number;
+    toolFailures: number;
     transcriptPath: string;
     sessionId: string;
 }
@@ -10,6 +11,30 @@ export interface ExtractedCorrection {
     prefix: 'NO' | 'DO' | 'MUST' | 'WARN';
     keywords: string[];
 }
+interface TranscriptLine {
+    type?: string;
+    message?: {
+        role?: string;
+        content?: string | Array<{
+            type: string;
+            text?: string;
+            tool_use_id?: string;
+            is_error?: boolean;
+        }>;
+    };
+    toolUseResult?: {
+        stdout?: string;
+        stderr?: string;
+        status?: string;
+    };
+    sessionId?: string;
+    uuid?: string;
+}
+export interface ToolFailure {
+    toolName: string;
+    exitCode: number;
+    errorText: string;
+}
 /**
  * Parse hook input from stdin to extract transcript path and session ID.
  */
@@ -22,9 +47,31 @@ export declare function readHookInput(stdin: string): {
  * Auto-processes inbox and writes audit log.
  */
 export declare function digestTranscript(brainRoot: string, transcriptPath: string, sessionId?: string): DigestResult;
+/**
+ * Parse tool_result blocks from a Claude Code transcript.
+ * Returns detected failures (exit code ≠ 0, is_error = true).
+ */
+export declare function parseToolResults(transcriptPath: string): ToolFailure[];
+/**
+ * Detect retry patterns — same error appearing 3+ times in a session.
+ * Returns deduplicated failures with retry count.
+ */
+export declare function detectRetryPatterns(failures: ToolFailure[]): ToolFailure[];
+/**
+ * Detect a tool failure from a tool_result block.
+ * Returns failure info if exit code ≠ 0, null otherwise.
+ */
+export declare function detectToolFailure(block: {
+    content?: string | Array<{
+        type: string;
+        text?: string;
+    }>;
+    is_error?: boolean;
+}, toolUseResult?: TranscriptLine['toolUseResult']): ToolFailure | null;
 /**
  * Extract corrections from user messages using pattern matching.
  * Returns up to MAX_CORRECTIONS_PER_SESSION corrections.
  */
 export declare function extractCorrections(messages: string[]): ExtractedCorrection[];
+export {};
 //# sourceMappingURL=digest.d.ts.map

package/dist/digest.d.ts.map

@@ -1 +1 @@
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package/dist/evolve.d.ts

@@ -12,7 +12,8 @@ export interface EvolveResult {
     skipped: number;
     dryRun: boolean;
 }
-export declare function runEvolve(brainRoot: string, dryRun: boolean): Promise<EvolveResult>;
+export type EvolveMode = 'default' | 'prune';
+export declare function runEvolve(brainRoot: string, dryRun: boolean, mode?: EvolveMode): Promise<EvolveResult>;
 export declare function buildBrainSummary(brain: Brain): string;
 export declare function buildPrompt(summary: string, episodes: Episode[], outcomeSummary?: string): string;
 export declare function callGemini(prompt: string, apiKey: string): Promise<EvolveAction[]>;

package/dist/evolve.d.ts.map

@@ -1 +1 @@
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package/dist/index.d.ts

@@ -24,13 +24,13 @@ export { processInbox, ensureInbox, appendCorrection } from './inbox';
 export type { Correction, InboxResult } from './inbox';
 export { installHooks, uninstallHooks, checkHooks } from './hooks';
 export type { HookStatus } from './hooks';
-export { digestTranscript, extractCorrections, readHookInput } from './digest';
-export type { DigestResult, ExtractedCorrection } from './digest';
-export { resolveBrainRoot } from './constants';
+export { digestTranscript, extractCorrections, readHookInput, parseToolResults, detectToolFailure, detectRetryPatterns } from './digest';
+export type { DigestResult, ExtractedCorrection, ToolFailure } from './digest';
+export { resolveBrainRoot, resolveAgentBrain, resolveSharedBrain } from './constants';
 export { growCandidate, promoteCandidates, listCandidates, toCandidatePath, fromCandidatePath } from './candidates';
 export type { CandidateInfo, PromoteResult } from './candidates';
 export { runEvolve } from './evolve';
-export type { EvolveAction, EvolveResult } from './evolve';
+export type { EvolveAction, EvolveResult, EvolveMode } from './evolve';
 export { captureSessionStart, detectOutcome, buildOutcomeSummary, classifyOutcome } from './outcome';
 export type { SessionState, OutcomeResult } from './outcome';
 export { contraNeuron } from './fire';

package/dist/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAEA,cAAc,SAAS,CAAC;AACxB,cAAc,aAAa,CAAC;AAC5B,OAAO,EAAE,SAAS,EAAE,MAAM,WAAW,CAAC;AACtC,OAAO,EAAE,cAAc,EAAE,MAAM,eAAe,CAAC;AAC/C,OAAO,EAAE,QAAQ,EAAE,IAAI,EAAE,iBAAiB,EAAE,MAAM,cAAc,CAAC;AACjE,OAAO,EAAE,UAAU,EAAE,iBAAiB,EAAE,MAAM,QAAQ,CAAC;AACvD,OAAO,EAAE,cAAc,EAAE,MAAM,YAAY,CAAC;AAC5C,OAAO,EAAE,YAAY,EAAE,MAAM,UAAU,CAAC;AACxC,OAAO,EAAE,UAAU,EAAE,MAAM,QAAQ,CAAC;AACpC,YAAY,EAAE,UAAU,EAAE,MAAM,QAAQ,CAAC;AACzC,OAAO,EAAE,QAAQ,EAAE,MAAM,SAAS,CAAC;AACnC,YAAY,EAAE,WAAW,EAAE,MAAM,SAAS,CAAC;AAC3C,OAAO,EAAE,QAAQ,EAAE,MAAM,SAAS,CAAC;AACnC,YAAY,EAAE,WAAW,EAAE,MAAM,SAAS,CAAC;AAC3C,OAAO,EAAE,WAAW,EAAE,MAAM,YAAY,CAAC;AACzC,OAAO,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AACrC,OAAO,EAAE,SAAS,EAAE,MAAM,QAAQ,CAAC;AACnC,OAAO,EAAE,aAAa,EAAE,SAAS,EAAE,eAAe,EAAE,YAAY,EAAE,aAAa,EAAE,SAAS,EAAE,MAAM,QAAQ,CAAC;AAG3G,OAAO,EAAE,QAAQ,EAAE,eAAe,EAAE,iBAAiB,EAAE,YAAY,EAAE,MAAM,OAAO,CAAC;AACnF,YAAY,EAAE,WAAW,EAAE,MAAM,OAAO,CAAC;AACzC,OAAO,EAAE,UAAU,EAAE,YAAY,EAAE,MAAM,WAAW,CAAC;AACrD,YAAY,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACzC,OAAO,EAAE,YAAY,EAAE,WAAW,EAAE,gBAAgB,EAAE,MAAM,SAAS,CAAC;AACtE,YAAY,EAAE,UAAU,EAAE,WAAW,EAAE,MAAM,SAAS,CAAC;AAGvD,OAAO,EAAE,YAAY,EAAE,cAAc,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AACnE,YAAY,EAAE,UAAU,EAAE,MAAM,SAAS,CAAC;AAC1C,OAAO,EAAE,gBAAgB,EAAE,kBAAkB,EAAE,aAAa,EAAE,gBAAgB,EAAE,iBAAiB,EAAE,mBAAmB,EAAE,MAAM,UAAU,CAAC;AACzI,YAAY,EAAE,YAAY,EAAE,mBAAmB,EAAE,WAAW,EAAE,MAAM,UAAU,CAAC;AAC/E,OAAO,EAAE,gBAAgB,EAAE,iBAAiB,EAAE,kBAAkB,EAAE,MAAM,aAAa,CAAC;AAGtF,OAAO,EAAE,aAAa,EAAE,iBAAiB,EAAE,cAAc,EAAE,eAAe,EAAE,iBAAiB,EAAE,MAAM,cAAc,CAAC;AACpH,YAAY,EAAE,aAAa,EAAE,aAAa,EAAE,MAAM,cAAc,CAAC;AACjE,OAAO,EAAE,SAAS,EAAE,MAAM,UAAU,CAAC;AACrC,YAAY,EAAE,YAAY,EAAE,YAAY,EAAE,UAAU,EAAE,MAAM,UAAU,CAAC;AAGvE,OAAO,EAAE,mBAAmB,EAAE,aAAa,EAAE,mBAAmB,EAAE,eAAe,EAAE,MAAM,WAAW,CAAC;AACrG,YAAY,EAAE,YAAY,EAAE,aAAa,EAAE,MAAM,WAAW,CAAC;AAC7D,OAAO,EAAE,YAAY,EAAE,MAAM,QAAQ,CAAC"}

package/dist/index.js

@@ -65,6 +65,14 @@ function resolveBrainRoot(brainFlag) {
   if (existsSync(resolve("./brain"))) return resolve("./brain");
   return resolve(process.env.HOME || "~", "hebbian", "brain");
 }
+function resolveAgentBrain(brainRoot, agentName) {
+  return resolve(brainRoot, "agents", agentName);
+}
+function resolveSharedBrain(brainRoot) {
+  return resolve(brainRoot, "shared");
+}
+var AGENTS_DIR = "agents";
+var SHARED_DIR = "shared";
 
 // src/scanner.ts
 import { readdirSync, statSync, readFileSync, existsSync as existsSync2 } from "fs";
@@ -882,8 +890,8 @@ function computeHash(result) {
 }
 
 // src/init.ts
-import { mkdirSync as mkdirSync4, writeFileSync as writeFileSync7, existsSync as existsSync9, readdirSync as readdirSync6 } from "fs";
-import { join as join10 } from "path";
+import { mkdirSync as mkdirSync4, writeFileSync as writeFileSync7, readFileSync as readFileSync3, existsSync as existsSync9, readdirSync as readdirSync6, appendFileSync } from "fs";
+import { join as join10, dirname as dirname2 } from "path";
 var REGION_TEMPLATES = {
   brainstem: {
     description: "Absolute principles. Immutable. Read-only conscience.\nP0 \u2014 highest priority. bomb here halts EVERYTHING.",
@@ -944,6 +952,7 @@ ${template.description}
     }
   }
   mkdirSync4(join10(brainPath, "_agents", "global_inbox"), { recursive: true });
+  autoGitignore(brainPath);
   console.log(`\u{1F9E0} Brain initialized at ${brainPath}`);
   console.log(`   7 regions created: ${REGIONS.join(", ")}`);
   console.log("");
@@ -951,17 +960,41 @@ ${template.description}
   console.log(`   hebbian grow brainstem/NO_your_rule --brain ${brainPath}`);
   console.log(`   hebbian emit claude --brain ${brainPath}`);
 }
+function autoGitignore(brainPath) {
+  let dir = dirname2(brainPath);
+  for (let i = 0; i < 10; i++) {
+    if (existsSync9(join10(dir, ".git"))) {
+      const gitignorePath = join10(dir, ".gitignore");
+      const brainDirName = brainPath.replace(dir + "/", "") + "/";
+      if (existsSync9(gitignorePath)) {
+        const content = readFileSync3(gitignorePath, "utf8");
+        if (content.includes(brainDirName) || content.includes(brainDirName.replace(/\/$/, ""))) {
+          return;
+        }
+      }
+      appendFileSync(gitignorePath, `
+# hebbian brain (personal learning data)
+${brainDirName}
+`, "utf8");
+      console.log(`   \u{1F4DD} Added ${brainDirName} to .gitignore`);
+      return;
+    }
+    const parent = dirname2(dir);
+    if (parent === dir) break;
+    dir = parent;
+  }
+}
 
 // src/api.ts
 import { createServer } from "http";
 
 // src/inbox.ts
-import { readFileSync as readFileSync4, writeFileSync as writeFileSync9, existsSync as existsSync12, mkdirSync as mkdirSync7 } from "fs";
+import { readFileSync as readFileSync5, writeFileSync as writeFileSync9, existsSync as existsSync12, mkdirSync as mkdirSync7 } from "fs";
 import { join as join13 } from "path";
 
 // src/candidates.ts
 import { existsSync as existsSync10, mkdirSync as mkdirSync5, readdirSync as readdirSync7, renameSync as renameSync3, rmSync, statSync as statSync3 } from "fs";
-import { join as join11, dirname as dirname2, relative as relative3 } from "path";
+import { join as join11, dirname as dirname3, relative as relative3 } from "path";
 var CANDIDATE_THRESHOLD = 3;
 var CANDIDATE_DECAY_DAYS = 14;
 var CANDIDATE_SEGMENT = "_candidates";
@@ -991,7 +1024,7 @@ function moveCandidate(brainRoot, candidatePath, targetPath) {
     fireNeuron(brainRoot, targetPath);
     rmSync(src, { recursive: true, force: true });
   } else {
-    mkdirSync5(dirname2(dst), { recursive: true });
+    mkdirSync5(dirname3(dst), { recursive: true });
     renameSync3(src, dst);
   }
   console.log(`\u{1F393} promoted: ${candidatePath} \u2192 ${targetPath}`);
@@ -1067,7 +1100,7 @@ function readCounter(dir) {
 }
 
 // src/episode.ts
-import { readdirSync as readdirSync8, readFileSync as readFileSync3, writeFileSync as writeFileSync8, mkdirSync as mkdirSync6, existsSync as existsSync11 } from "fs";
+import { readdirSync as readdirSync8, readFileSync as readFileSync4, writeFileSync as writeFileSync8, mkdirSync as mkdirSync6, existsSync as existsSync11 } from "fs";
 import { join as join12 } from "path";
 var MAX_EPISODES = 100;
 var SESSION_LOG_DIR = "hippocampus/session_log";
@@ -1104,7 +1137,7 @@ function readEpisodes(brainRoot) {
   for (const entry of entries) {
     if (!entry.startsWith("memory") || !entry.endsWith(".neuron")) continue;
     try {
-      const content = readFileSync3(join12(logDir, entry), "utf8");
+      const content = readFileSync4(join12(logDir, entry), "utf8");
       if (content.trim()) {
         episodes.push(JSON.parse(content));
       }
@@ -1138,7 +1171,7 @@ function processInbox(brainRoot) {
   if (!existsSync12(inboxPath)) {
     return { processed: 0, skipped: 0, errors: [] };
   }
-  const content = readFileSync4(inboxPath, "utf8").trim();
+  const content = readFileSync5(inboxPath, "utf8").trim();
   if (!content) {
     return { processed: 0, skipped: 0, errors: [] };
   }
@@ -1233,7 +1266,7 @@ function ensureInbox(brainRoot) {
 function appendCorrection(brainRoot, correction) {
   const filePath = ensureInbox(brainRoot);
   const line = JSON.stringify(correction) + "\n";
-  const existing = readFileSync4(filePath, "utf8");
+  const existing = readFileSync5(filePath, "utf8");
   writeFileSync9(filePath, existing + line, "utf8");
 }
 
@@ -1503,7 +1536,7 @@ function clearReports() {
 }
 
 // src/hooks.ts
-import { readFileSync as readFileSync5, writeFileSync as writeFileSync10, existsSync as existsSync13, mkdirSync as mkdirSync8, readdirSync as readdirSync9 } from "fs";
+import { readFileSync as readFileSync6, writeFileSync as writeFileSync10, existsSync as existsSync13, mkdirSync as mkdirSync8, readdirSync as readdirSync9 } from "fs";
 import { execSync as execSync2 } from "child_process";
 import { join as join14, resolve as resolve2 } from "path";
 var SETTINGS_DIR = ".claude";
@@ -1534,7 +1567,7 @@ function installHooks(brainRoot, projectRoot, global) {
   let settings = {};
   if (existsSync13(settingsPath)) {
     try {
-      settings = JSON.parse(readFileSync5(settingsPath, "utf8"));
+      settings = JSON.parse(readFileSync6(settingsPath, "utf8"));
     } catch {
       console.log(`\u26A0\uFE0F  settings.local.json was malformed, overwriting`);
     }
@@ -1600,7 +1633,7 @@ function uninstallHooks(projectRoot, global) {
   }
   let settings;
   try {
-    settings = JSON.parse(readFileSync5(settingsPath, "utf8"));
+    settings = JSON.parse(readFileSync6(settingsPath, "utf8"));
   } catch {
     console.log("settings.local.json is malformed, nothing to uninstall");
     return;
@@ -1643,7 +1676,7 @@ function checkHooks(projectRoot, global) {
   }
   let settings;
   try {
-    settings = JSON.parse(readFileSync5(settingsPath, "utf8"));
+    settings = JSON.parse(readFileSync6(settingsPath, "utf8"));
   } catch {
     console.log(`\u274C settings.local.json is malformed`);
     return status;
@@ -1683,7 +1716,7 @@ function hasBrainRegions(dir) {
 }
 
 // src/digest.ts
-import { readFileSync as readFileSync6, writeFileSync as writeFileSync11, existsSync as existsSync14, mkdirSync as mkdirSync9 } from "fs";
+import { readFileSync as readFileSync7, writeFileSync as writeFileSync11, existsSync as existsSync14, mkdirSync as mkdirSync9 } from "fs";
 import { join as join15, basename } from "path";
 var NEGATION_PATTERNS = [
   /\bdon[''\u2019]?t\b/i,
@@ -1746,14 +1779,30 @@ function digestTranscript(brainRoot, transcriptPath, sessionId) {
   const logPath = join15(logDir, `${resolvedSessionId}.jsonl`);
   if (existsSync14(logPath)) {
     console.log(`\u23ED already digested session ${resolvedSessionId}, skip`);
-    return { corrections: 0, skipped: 0, transcriptPath, sessionId: resolvedSessionId };
+    return { corrections: 0, skipped: 0, toolFailures: 0, transcriptPath, sessionId: resolvedSessionId };
   }
   const messages = parseTranscript(transcriptPath);
+  const toolFailures = parseToolResults(transcriptPath);
+  for (const failure of toolFailures) {
+    logEpisode(brainRoot, "tool-failure", failure.toolName, failure.errorText);
+  }
+  const retries = detectRetryPatterns(toolFailures);
+  for (const retry of retries) {
+    logEpisode(brainRoot, "retry-pattern", retry.toolName, retry.errorText);
+  }
+  const totalSignals = toolFailures.length + retries.length;
+  if (totalSignals > 0) {
+    console.log(`\u{1F527} digest: ${toolFailures.length} tool failure(s), ${retries.length} retry pattern(s) logged`);
+  }
   const corrections = extractCorrections(messages);
-  if (corrections.length === 0) {
+  if (corrections.length === 0 && toolFailures.length === 0) {
     console.log(`\u{1F4DD} digest: no corrections found in session ${resolvedSessionId}`);
     writeAuditLog(brainRoot, resolvedSessionId, []);
-    return { corrections: 0, skipped: messages.length, transcriptPath, sessionId: resolvedSessionId };
+    return { corrections: 0, skipped: messages.length, toolFailures: toolFailures.length, transcriptPath, sessionId: resolvedSessionId };
+  }
+  if (corrections.length === 0) {
+    writeAuditLog(brainRoot, resolvedSessionId, []);
+    return { corrections: 0, skipped: messages.length, toolFailures: toolFailures.length, transcriptPath, sessionId: resolvedSessionId };
   }
   let applied = 0;
   const auditEntries = [];
@@ -1773,12 +1822,13 @@ function digestTranscript(brainRoot, transcriptPath, sessionId) {
   return {
     corrections: applied,
     skipped: messages.length - corrections.length,
+    toolFailures: toolFailures.length,
     transcriptPath,
     sessionId: resolvedSessionId
   };
 }
 function parseTranscript(transcriptPath) {
-  const content = readFileSync6(transcriptPath, "utf8");
+  const content = readFileSync7(transcriptPath, "utf8");
   const lines = content.split("\n").filter(Boolean);
   const messages = [];
   for (const line of lines) {
@@ -1804,6 +1854,64 @@ function extractText(content) {
   }
   return null;
 }
+var MAX_FAILURES_PER_SESSION = 20;
+function parseToolResults(transcriptPath) {
+  const content = readFileSync7(transcriptPath, "utf8");
+  const lines = content.split("\n").filter(Boolean);
+  const failures = [];
+  for (const line of lines) {
+    if (failures.length >= MAX_FAILURES_PER_SESSION) break;
+    let entry;
+    try {
+      entry = JSON.parse(line);
+    } catch {
+      continue;
+    }
+    if (entry.type !== "user") continue;
+    if (!entry.message || !Array.isArray(entry.message.content)) continue;
+    for (const block of entry.message.content) {
+      if (block.type !== "tool_result") continue;
+      if (!block.is_error) continue;
+      const failure = detectToolFailure(block, entry.toolUseResult);
+      if (failure) failures.push(failure);
+    }
+  }
+  return failures;
+}
+function detectRetryPatterns(failures) {
+  const counts = /* @__PURE__ */ new Map();
+  for (const f of failures) {
+    const key = f.toolName.toLowerCase().trim();
+    const existing = counts.get(key);
+    if (existing) {
+      existing.count++;
+    } else {
+      counts.set(key, { failure: f, count: 1 });
+    }
+  }
+  return [...counts.values()].filter((entry) => entry.count >= 3).map((entry) => ({
+    ...entry.failure,
+    toolName: `[retry x${entry.count}] ${entry.failure.toolName}`
+  }));
+}
+function detectToolFailure(block, toolUseResult) {
+  if (!block.is_error) return null;
+  let errorText = "";
+  if (typeof block.content === "string") {
+    errorText = block.content;
+  } else if (Array.isArray(block.content)) {
+    errorText = block.content.filter((b) => b.type === "text" && b.text).map((b) => b.text).join("\n");
+  }
+  if (!errorText && typeof toolUseResult === "string") {
+    errorText = toolUseResult;
+  }
+  if (!errorText) return null;
+  const exitMatch = errorText.match(/^Exit code (\d+)/);
+  const exitCode = exitMatch ? parseInt(exitMatch[1], 10) : 1;
+  const firstLine = errorText.split("\n").find((l) => l.trim() && !l.startsWith("Exit code")) || "unknown";
+  const toolName = firstLine.trim().slice(0, 80);
+  return { toolName, exitCode, errorText: errorText.slice(0, 500) };
+}
 function extractCorrections(messages) {
   const corrections = [];
   for (const text of messages) {
@@ -1998,12 +2106,12 @@ function writeAuditLog(brainRoot, sessionId, entries) {
 }
 
 // src/evolve.ts
-import { existsSync as existsSync16, readFileSync as readFileSync8, writeFileSync as writeFileSync13 } from "fs";
+import { existsSync as existsSync16, readFileSync as readFileSync9, writeFileSync as writeFileSync13 } from "fs";
 import { join as join17 } from "path";
 
 // src/outcome.ts
 import { execSync as execSync3 } from "child_process";
-import { existsSync as existsSync15, mkdirSync as mkdirSync10, writeFileSync as writeFileSync12, readFileSync as readFileSync7, readdirSync as readdirSync10, rmSync as rmSync2, statSync as statSync4 } from "fs";
+import { existsSync as existsSync15, mkdirSync as mkdirSync10, writeFileSync as writeFileSync12, readFileSync as readFileSync8, readdirSync as readdirSync10, rmSync as rmSync2, statSync as statSync4 } from "fs";
 import { join as join16 } from "path";
 import { randomUUID } from "crypto";
 function captureSessionStart(brainRoot) {
@@ -2202,7 +2310,7 @@ function readLatestSessionState(brainRoot) {
   }
   if (!latest) return null;
   try {
-    return JSON.parse(readFileSync7(latest.path, "utf8"));
+    return JSON.parse(readFileSync8(latest.path, "utf8"));
   } catch {
     return null;
   }
@@ -2229,7 +2337,7 @@ var DEFAULT_MODEL = "gemini-2.0-flash-lite";
 var API_TIMEOUT = 3e4;
 var RETRY_DELAY = 5e3;
 var EVOLVE_COOLDOWN_FILE = "hippocampus/evolve_last_run";
-async function runEvolve(brainRoot, dryRun) {
+async function runEvolve(brainRoot, dryRun, mode = "default") {
   const apiKey = process.env.GEMINI_API_KEY;
   if (!apiKey) {
     console.error("\u274C GEMINI_API_KEY not set. Get one at https://aistudio.google.com/apikey");
@@ -2239,7 +2347,7 @@ async function runEvolve(brainRoot, dryRun) {
     const cooldownMs = (parseInt(process.env.EVOLVE_COOLDOWN_SECONDS ?? "60", 10) || 60) * 1e3;
     const cooldownPath = join17(brainRoot, EVOLVE_COOLDOWN_FILE);
     if (existsSync16(cooldownPath)) {
-      const lastRun = parseInt(readFileSync8(cooldownPath, "utf8").trim(), 10);
+      const lastRun = parseInt(readFileSync9(cooldownPath, "utf8").trim(), 10);
       const elapsed = Date.now() - lastRun;
       if (elapsed < cooldownMs) {
         const remaining = Math.ceil((cooldownMs - elapsed) / 1e3);
@@ -2252,7 +2360,7 @@ async function runEvolve(brainRoot, dryRun) {
   const brain = scanBrain(brainRoot);
   const summary = buildBrainSummary(brain);
   const outcomeSummary = buildOutcomeSummary(brainRoot);
-  const prompt = buildPrompt(summary, episodes, outcomeSummary);
+  const prompt = mode === "prune" ? buildPrunePrompt(summary, episodes) : buildPrompt(summary, episodes, outcomeSummary);
   let rawActions;
   try {
     rawActions = await callGemini(prompt, apiKey);
@@ -2343,6 +2451,44 @@ Focus on: strengthening repeatedly-used rules, pruning ineffective ones, growing
 Respond with a JSON array of actions:
 [{"type":"fire","path":"cortex/NO_console_log","reason":"fired 3 times in recent sessions"}]`;
 }
+function buildPrunePrompt(summary, episodes) {
+  const episodeLines = episodes.length > 0 ? episodes.map((e) => `- [${e.ts}] ${e.type}: ${sanitizeForPrompt(e.detail)}`).join("\n") : "(no recent episodes)";
+  return `You are the PRUNING engine for a hebbian brain \u2014 a filesystem-based memory system for AI agents.
+
+Your job is CLEANUP. Remove what's stale, redundant, or harmful. Healthy forgetting.
+
+## Axioms
+- Folder = Neuron, File = Firing Trace, Counter = Activation strength
+- 7 regions: brainstem(P0) > limbic(P1) > hippocampus(P2) > sensors(P3) > cortex(P4) > ego(P5) > prefrontal(P6)
+- PROTECTED regions (brainstem, limbic, sensors): NEVER touch these
+
+## Current Brain
+${summary}
+
+## Recent Episodes (last ${episodes.length})
+${episodeLines}
+
+## Pruning Criteria
+1. **Stale neurons** \u2014 counter is low AND no recent episodes mention them. They occupy space but provide no value.
+2. **High contra ratio** \u2014 neurons present in many reverted sessions (contra_ratio > 0.7). They correlate with bad outcomes.
+3. **Redundant neurons** \u2014 two neurons in the same region with very similar names/meaning. Keep the stronger one, prune the weaker.
+4. **Contradicted neurons** \u2014 a newer neuron explicitly overrides an older one. Remove the older.
+
+## Available Actions (pruning-focused)
+- prune: Decrement a neuron's counter. Use for rules that aren't working.
+- decay: Mark inactive neurons as dormant. Use for stale rules with no recent activity.
+- signal: Add bomb signal to block a problematic neuron. Use for neurons that actively cause harm.
+
+Do NOT use grow or fire \u2014 this is a pruning pass, not a growth pass.
+
+## Constraints
+- Max ${MAX_ACTIONS} actions per cycle
+- NEVER target brainstem, limbic, or sensors regions
+- Be conservative \u2014 only prune what you're confident about
+
+Respond with a JSON array of actions:
+[{"type":"prune","path":"cortex/WARN_old_rule","reason":"not fired in 30+ days, no recent episodes"}]`;
+}
 async function callGemini(prompt, apiKey) {
   const model = process.env.EVOLVE_MODEL || DEFAULT_MODEL;
   const url = `https://generativelanguage.googleapis.com/v1beta/models/${model}:generateContent`;
@@ -2481,6 +2627,7 @@ function actionIcon(type) {
   }
 }
 export {
+  AGENTS_DIR,
   DECAY_DAYS,
   DIGEST_LOG_DIR,
   EMIT_TARGETS,
@@ -2499,6 +2646,7 @@ export {
   REGION_KO,
   REGION_PRIORITY,
   SESSION_STATE_DIR,
+  SHARED_DIR,
   SIGNAL_TYPES,
   SPOTLIGHT_DAYS,
   appendCorrection,
@@ -2509,6 +2657,8 @@ export {
   clearReports,
   contraNeuron,
   detectOutcome,
+  detectRetryPatterns,
+  detectToolFailure,
   digestTranscript,
   emitBootstrap,
   emitIndex,
@@ -2529,12 +2679,15 @@ export {
   jaccardSimilarity,
   listCandidates,
   logEpisode,
+  parseToolResults,
   printDiag,
   processInbox,
   promoteCandidates,
   readEpisodes,
   readHookInput,
+  resolveAgentBrain,
   resolveBrainRoot,
+  resolveSharedBrain,
   rollbackNeuron,
   runDecay,
   runDedup,