harness-everything 0.40.0 → 0.41.1

package/benchmarks/results/f1-doc-path-baseline/before-fix/3-source-reverted.stdout.json

@@ -0,0 +1,115 @@
+{
+  "lint": {
+    "exit": 1,
+    "evidence": {
+      "immutability": "observed"
+    },
+    "diagnostics": [
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRAPH-012 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRAPH-012"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRAPH-020 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRAPH-020"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-012 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-012"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-013 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-013"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-020 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-020"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-099 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-099"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference GRPH-007 cannot be resolved",
+        "id": "GRPH-007"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001 cannot be resolved",
+        "id": "PRD-GRPH-001"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r2 cannot be resolved",
+        "id": "PRD-GRPH-001@r2"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r2#REQ-GRPH-012 cannot be resolved",
+        "id": "PRD-GRPH-001@r2#REQ-GRPH-012"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r3 cannot be resolved",
+        "id": "PRD-GRPH-001@r3"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r4 cannot be resolved",
+        "id": "PRD-GRPH-001@r4"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference legacy:GRPH-007 cannot be resolved",
+        "id": "legacy:GRPH-007"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference legacy:GRPH-007@docs/adr/legacy/v2/GRPH-007.md cannot be resolved",
+        "id": "legacy:GRPH-007@docs/adr/legacy/v2/GRPH-007.md"
+      }
+    ]
+  },
+  "links": {
+    "checked": 6,
+    "broken": []
+  },
+  "coverage": {
+    "unsupported": []
+  }
+}

package/benchmarks/results/f1-doc-path-baseline/before-fix/4a-packaged-clean.stdout.json

@@ -0,0 +1,115 @@
+{
+  "lint": {
+    "exit": 1,
+    "evidence": {
+      "immutability": "observed"
+    },
+    "diagnostics": [
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRAPH-012 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRAPH-012"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRAPH-020 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRAPH-020"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-012 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-012"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-013 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-013"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-020 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-020"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-099 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-099"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference GRPH-007 cannot be resolved",
+        "id": "GRPH-007"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001 cannot be resolved",
+        "id": "PRD-GRPH-001"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r2 cannot be resolved",
+        "id": "PRD-GRPH-001@r2"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r2#REQ-GRPH-012 cannot be resolved",
+        "id": "PRD-GRPH-001@r2#REQ-GRPH-012"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r3 cannot be resolved",
+        "id": "PRD-GRPH-001@r3"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r4 cannot be resolved",
+        "id": "PRD-GRPH-001@r4"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference legacy:GRPH-007 cannot be resolved",
+        "id": "legacy:GRPH-007"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference legacy:GRPH-007@docs/adr/legacy/v2/GRPH-007.md cannot be resolved",
+        "id": "legacy:GRPH-007@docs/adr/legacy/v2/GRPH-007.md"
+      }
+    ]
+  },
+  "links": {
+    "checked": 6,
+    "broken": []
+  },
+  "coverage": {
+    "unsupported": []
+  }
+}

package/benchmarks/results/f1-doc-path-baseline/before-fix/4b-packaged-injected.stdout.json

@@ -0,0 +1,127 @@
+{
+  "lint": {
+    "exit": 1,
+    "evidence": {
+      "immutability": "observed"
+    },
+    "diagnostics": [
+      {
+        "code": "invalid-status",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "status bogus is not valid for reference"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRAPH-012 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRAPH-012"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRAPH-020 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRAPH-020"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-012 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-012"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-013 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-013"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-020 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-020"
+      },
+      {
+        "code": "missing-req",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "requirement REQ-GRPH-099 is referenced but is not defined in an active PRD",
+        "id": "REQ-GRPH-099"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference GRPH-007 cannot be resolved",
+        "id": "GRPH-007"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001 cannot be resolved",
+        "id": "PRD-GRPH-001"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r2 cannot be resolved",
+        "id": "PRD-GRPH-001@r2"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r2#REQ-GRPH-012 cannot be resolved",
+        "id": "PRD-GRPH-001@r2#REQ-GRPH-012"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r3 cannot be resolved",
+        "id": "PRD-GRPH-001@r3"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference PRD-GRPH-001@r4 cannot be resolved",
+        "id": "PRD-GRPH-001@r4"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference legacy:GRPH-007 cannot be resolved",
+        "id": "legacy:GRPH-007"
+      },
+      {
+        "code": "unresolved-ref",
+        "severity": "error",
+        "path": "docs/document-lifecycle.md",
+        "message": "reference legacy:GRPH-007@docs/adr/legacy/v2/GRPH-007.md cannot be resolved",
+        "id": "legacy:GRPH-007@docs/adr/legacy/v2/GRPH-007.md"
+      }
+    ]
+  },
+  "links": {
+    "checked": 7,
+    "broken": [
+      {
+        "path": "docs/document-lifecycle.md",
+        "line": 328,
+        "target": "./does-not-exist.md"
+      }
+    ]
+  },
+  "coverage": {
+    "unsupported": []
+  }
+}

package/benchmarks/results/f1-doc-path-baseline/before-fix/5-source-missing-config.stdout.json

@@ -0,0 +1,15 @@
+{
+  "lint": {
+    "exit": 2,
+    "error": "cannot read config: ENOENT: no such file or directory, open '<workspace>/.agents/harness-everything/does-not-exist.json'",
+    "diagnostics": []
+  },
+  "links": {
+    "checked": 0,
+    "broken": [],
+    "skipped": "lint-usage-error"
+  },
+  "coverage": {
+    "unsupported": []
+  }
+}

package/benchmarks/results/f1-doc-path-baseline/before-fix/5b-packaged-missing-config.stdout.json

@@ -0,0 +1,15 @@
+{
+  "lint": {
+    "exit": 2,
+    "error": "cannot read config: ENOENT: no such file or directory, open '<workspace>/.agents/harness-everything/does-not-exist.json'",
+    "diagnostics": []
+  },
+  "links": {
+    "checked": 0,
+    "broken": [],
+    "skipped": "lint-usage-error"
+  },
+  "coverage": {
+    "unsupported": []
+  }
+}

package/benchmarks/results/f1-doc-path-baseline/before-fix/6-supplementary-fixture-ok.input.md

@@ -0,0 +1,8 @@
+---
+role: reference
+status: active
+---
+
+# Fixture
+
+See [the lifecycle note](./note.md#top) and [local](./note.md).

package/benchmarks/results/f1-doc-path-baseline/before-fix/6-supplementary-fixture-ok.stdout.json

@@ -0,0 +1,16 @@
+{
+  "lint": {
+    "exit": 0,
+    "evidence": {
+      "immutability": "unavailable"
+    },
+    "diagnostics": []
+  },
+  "links": {
+    "checked": 2,
+    "broken": []
+  },
+  "coverage": {
+    "unsupported": []
+  }
+}

package/benchmarks/results/f1-doc-path-baseline/before-fix/README.md

@@ -0,0 +1,34 @@
+# F1 doc-path baseline
+
+Record of `harness-everything/scripts/doc-check.js check` run from a cwd outside the worktree, using absolute script paths. Base `--base b7136e4` (main at the start of F1). Raw stdout and stderr sit next to this file, named by case.
+
+**Result: the packet's clean-doc expectation (exit 0) is not met.** The clean dogfood doc exits 1. Lint flags example IDs that appear in its prose and inline code (see the blocker below). The injected defects are detected correctly.
+
+## Commands
+
+Each row is `node <script> check --workspace <worktree> --config <config> --changed-path docs/document-lifecycle.md --base b7136e4`, with `<script>` set as shown. Wall time is the process wall clock on macOS, Node v24.14.1, and includes Node startup.
+
+| Case | Script | Config | Exit | Expected | Wall ms | Trimmed output |
+|---|---|---|---|---|---|---|
+| 1-source-clean | `harness-everything/scripts/doc-check.js` | `.agents/harness-everything/project-docs.json` | **1** | 0 | 111 | lint exit 1: 14 errors (`missing-req` ×6, `unresolved-ref` ×8); links checked 6, broken 0 |
+| 2-source-injected | same | same | 1 | 1 | 108 | lint: `invalid-status` (`status: bogus`) + the same reference errors; links: `./does-not-exist.md` broken at line 328 |
+| 3-source-reverted | same | same | **1** | 0 | 108 | Byte-identical to the pre-injection copy (`cmp` passed); same output as case 1 |
+| 4a-packaged-clean | `plugins/harness-everything/skills/harness-everything/scripts/doc-check.js` | same | 1 | = source | 112 | stdout byte-identical to 1-source-clean |
+| 4b-packaged-injected | packaged | same | 1 | = source | 109 | stdout byte-identical to 2-source-injected |
+| 5-source-missing-config | `harness-everything/scripts/doc-check.js` | `.agents/harness-everything/does-not-exist.json` | 2 | 2 | 60 | lint exit 2, `cannot read config: ENOENT`; links `skipped: lint-usage-error` |
+| 5b-packaged-missing-config | packaged | same | 2 | 2 | 59 | stdout byte-identical to 5-source-missing-config |
+| 6-supplementary-fixture-ok (not the dogfood doc) | source and packaged | copy of the config | 0 / 0 | 0 | not timed | Fixture in a temp dir with no ID tokens and two valid relative links; lint 0 diagnostics; links checked 2, broken 0; `immutability: unavailable` (not a git repo) |
+
+Packaged and source stdout matched byte-for-byte for cases 1, 2 and 5.
+
+## Blocker: lint flags example IDs in the dogfood doc
+
+- **executed:** `doc-lifecycle.js lint` on the dogfood doc reports `missing-req` and `unresolved-ref` for example IDs such as `REQ-GRAPH-012`, `GRPH-007` and `PRD-GRPH-001@r2`.
+- **executed:** Minimal reproducer. A doc with frontmatter and no ID-shaped tokens gives 0 diagnostics. The same doc with only `` `GRPH-007` `` in a code span gives `unresolved-ref: reference GRPH-007 cannot be resolved`. Lint's reference scanner does not skip inline code spans.
+- **source-traced:** `doc-lifecycle.js` scans prose for ID patterns with `referencePattern` (around line 1282), excluding only fenced blocks. The doc uses those IDs as examples of the ID grammar in prose (lines 140–256).
+- **Consequence:** getting exit 0 on this doc needs either a content rewrite of the example IDs (outside "no content rewrite") or a `doc-lifecycle.js` change (outside F1's write-set and marked "reuse unchanged" in A0). Neither was done here. Needs an amended packet.
+
+## Notes
+
+- The frontmatter added to `docs/document-lifecycle.md` (`role: reference`, `status: active`) is the only content change to that file. The baseline's injections were applied to a copy and then restored byte-identical.
+- The supplementary fixture is evidence for the exit-0 path only. It is not a dogfood result.