guardlink 1.0.0 → 1.2.0

package/dist/init/templates.js

@@ -53,7 +53,7 @@ Append after severity: \`cwe:CWE-89\`, \`owasp:A03:2021\`, \`capec:CAPEC-66\`, \
 
 1. **Define once, reference everywhere.** \`@asset\`, \`@threat\`, \`@control\` with \`(#id)\` go in \`.guardlink/definitions${project.definitionsExt}\`. Source files use relationship verbs only (\`@mitigates\`, \`@exposes\`, etc.).
 2. **Read definitions before adding.** Check for existing IDs first — avoid duplicates.
-3. **Every \`@exposes\` needs a plan.** Match with \`@mitigates\` (fix exists), \`@accepts\` (risk acknowledged), or TODO.
+3. **Every \`@exposes\` needs a response.** Match with \`@mitigates\` (fix exists), \`@audit\` (flag for review), or \`@accepts\` (human-only risk acceptance). AI agents must NEVER write \`@accepts\` — use \`@audit\` instead.
 4. **Always annotate security-relevant code.** At minimum, add \`@comment\` to document intent.
 5. **Use the full verb set.** \`@flows\` for data movement, \`@handles\` for data classification, \`@boundary\` for trust boundaries.
 
@@ -63,6 +63,7 @@ Append after severity: \`cwe:CWE-89\`, \`owasp:A03:2021\`, \`capec:CAPEC-66\`, \
 |-----------|------------|
 | New service/component | \`@asset\` in definitions, then reference in source |
 | Security gap exists | \`@exposes Asset to #threat\` |
+| Risk with no fix yet | \`@audit Asset\` + \`@comment\` explaining potential controls |
 | Implementing a fix | \`@mitigates Asset against #threat using #control\` |
 | Processing sensitive data | \`@handles pii on Asset\` |
 | Proprietary algorithm | \`@shield:begin\` ... \`@shield:end\` |
@@ -101,22 +102,37 @@ This project uses [GuardLink](https://guardlink.bugb.io) annotations in source c
 
 ### Key Rules
 
-1. Definitions (\`@asset\`, \`@threat\`, \`@control\` with \`#id\`) go in \`.guardlink/definitions${project.definitionsExt}\` — read it before adding new ones.
-2. Source files use relationship verbs only: \`@mitigates\`, \`@exposes\`, \`@accepts\`, \`@flows\`, \`@handles\`, \`@boundary\`, \`@comment\`.
-3. Every \`@exposes\` needs a matching \`@mitigates\` or \`@accepts\`.
-4. Always add at least \`@comment\` on security-relevant code.
-5. Run \`guardlink validate .\` after making changes.
+1. Do not delete or mangle existing GuardLink annotations. Treat them as part of the code. Edit only when intentionally changing the threat model.
+2. Definitions (\`@asset\`, \`@threat\`, \`@control\` with \`(#id)\`) live in \`.guardlink/definitions${project.definitionsExt}\`. Reuse existing \`#id\`s — never redefine.
+3. Source files use relationship verbs only: \`@mitigates\`, \`@exposes\`, \`@flows\`, \`@handles\`, \`@boundary\`, \`@comment\`, \`@validates\`, \`@audit\`, \`@owns\`, \`@assumes\`, \`@transfers\`.
+4. Every \`@exposes\` should be paired with \`@mitigates\` or \`@audit\` (for human review). NEVER write \`@accepts\` — that is a human-only governance decision.
+5. Prefer coupled blocks that tell a complete story near the code they describe (risk + control + flow + note).
+6. Avoid \`@shield\` unless a human explicitly asks to hide code from AI — it creates blind spots.
 
-### MCP Tools Available
+### Workflow (while coding)
 
-Use \`guardlink_lookup\` to check existing definitions. Use \`guardlink_validate\` after annotating. Use \`guardlink_suggest <file>\` for recommendations.
+- Before adding new annotations: skim \`.guardlink/definitions${project.definitionsExt}\` to reuse IDs.
+- After changes: run \`guardlink validate .\` to catch syntax/dangling refs; run \`guardlink status .\` to check coverage; commit updates with the code.
+- When adding features: add or update annotations in the same PR.
 
-### Quick Syntax
+### Tools
+
+- MCP tools (when available, e.g., Claude Code): \`guardlink_lookup\`, \`guardlink_validate\`, \`guardlink_status\`, \`guardlink_parse\`, \`guardlink_suggest <file>\`.
+- CLI equivalents (always available): \`guardlink validate .\`, \`guardlink status .\`, \`guardlink parse .\`.
+
+### Quick Syntax (common verbs)
 
 \`\`\`
-@exposes Asset to #threat [P0] cwe:CWE-89 -- "description"
-@mitigates Asset against #threat using #control -- "how"
-@comment -- "security-relevant note"
+@exposes App.API to #sqli [P0] cwe:CWE-89 -- "req.body.email concatenated into SQL"
+@mitigates App.API against #sqli using #prepared-stmts -- "Parameterized queries via pg"
+@audit App.API -- "Timing attack risk — needs human review to assess bcrypt constant-time comparison"
+@flows User -> App.API via HTTPS -- "Login request path"
+@boundary between #api and #db (#data-boundary) -- "App → DB trust change"
+@handles pii on App.API -- "Processes email and session token"
+@validates #prepared-stmts for App.API -- "sqlInjectionTest.ts ensures placeholders used"
+@audit App.API -- "Token rotation logic needs crypto review"
+@owns security-team for App.API -- "Team responsible for reviews"
+@comment -- "Rate limit: 100 req/15min via express-rate-limit"
 \`\`\`
 `.trimStart();
 }
@@ -128,25 +144,29 @@ export function cursorRulesContent(project) {
 
 This project uses GuardLink annotations in source code comments.
 
-## Annotation Syntax
-- @asset <Component.Path> (#id) -- "description"
-- @threat <Name> (#id) [P0|P1|P2|P3] cwe:CWE-NNN -- "description"
-- @control <Name> (#id) -- "description"
-- @mitigates <Asset> against <#threat> using <#control> -- "how"
-- @exposes <Asset> to <#threat> [severity] cwe:CWE-NNN -- "what"
-- @accepts <#threat> on <Asset> -- "why"
-- @flows <Source> -> <Target> via <mechanism> -- "details"
-- @boundary between <A> and <B> (#id) -- "trust boundary"
-- @handles <pii|phi|financial|secrets> on <Asset>
-- @shield:begin -- "reason" ... @shield:end
-
-## Rules
-- All @asset, @threat, @control with (#id) go in .guardlink/definitions${project.definitionsExt}. Source files use only relationship verbs (@mitigates, @exposes, @accepts, @flows, etc).
-- Read definitions file before adding — check for existing IDs first.
-- Severity: P0=critical, P1=high, P2=medium, P3=low. Only P0-P3.
-- External refs: cwe:CWE-89, owasp:A03:2021, capec:CAPEC-66
-- Every @exposes needs a matching @mitigates or @accepts.
-- Run \`guardlink validate .\` to check annotations.
+## Key Rules
+- Preserve existing annotations — do not delete or mangle them. Edit only when intentionally changing the model.
+- Definitions (@asset, @threat, @control with (#id)) live in .guardlink/definitions${project.definitionsExt}. Reuse IDs — never redefine.
+- Source files use relationship verbs: @mitigates, @exposes, @flows, @handles, @boundary, @comment, @validates, @audit, @owns, @assumes, @transfers.
+- Pair @exposes with @mitigates or @audit. NEVER write @accepts — that is a human-only governance decision.
+- When no mitigation exists, use @audit to flag for human review + @comment to suggest potential controls.
+- Avoid @shield unless a human explicitly asks to hide code from AI.
+
+## Workflow
+- Before changes: skim .guardlink/definitions${project.definitionsExt}.
+- After changes: run \`guardlink validate .\` and \`guardlink status .\`.
+
+## Quick Syntax
+- @exposes App.API to #sqli [P0] cwe:CWE-89 -- "req.body.email concatenated into SQL"
+- @mitigates App.API against #sqli using #prepared-stmts -- "Parameterized queries via pg"
+- @audit App.API -- "Timing attack risk — needs human review"
+- @flows User -> App.API via HTTPS -- "Login request"
+- @boundary between #api and #db (#data-boundary) -- "Trust change"
+- @handles pii on App.API -- "Processes email, token"
+- @validates #prepared-stmts for App.API -- "CI test ensures placeholders"
+- @audit App.API -- "Token rotation review"
+- @owns security-team for App.API -- "Team responsible"
+- @comment -- "Rate limit: 100 req/15min"
 `.trimStart();
 }
 // ─── Cursor .mdc format ──────────────────────────────────────────────
@@ -193,7 +213,7 @@ ${c} ─── Your Definitions ────────────────
 // ─── Config file ─────────────────────────────────────────────────────
 export function configContent(project) {
     return JSON.stringify({
-        version: '1.0.0',
+        version: '1.1.0',
         project: project.name,
         language: project.language,
         definitions: `definitions${project.definitionsExt}`,

package/dist/init/templates.js.map

@@ -1 +1 @@
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package/dist/mcp/server.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["../../src/mcp/server.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAqCG;AAEH,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAsCpE,wBAAgB,YAAY,IAAI,SAAS,CAwZxC"}
+{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["../../src/mcp/server.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAqCG;AAEH,OAAO,EAAE,SAAS,EAAE,MAAM,yCAAyC,CAAC;AAsCpE,wBAAgB,YAAY,IAAI,SAAS,CAoZxC"}

package/dist/mcp/server.js

@@ -38,7 +38,7 @@
  */
 import { McpServer } from '@modelcontextprotocol/sdk/server/mcp.js';
 import { z } from 'zod';
-import { parseProject } from '../parser/index.js';
+import { parseProject, findDanglingRefs, findUnmitigatedExposures } from '../parser/index.js';
 import { generateSarif } from '../analyzer/index.js';
 import { generateReport } from '../report/index.js';
 import { generateDashboardHTML } from '../dashboard/index.js';
@@ -69,7 +69,7 @@ function invalidateCache() {
 export function createServer() {
     const server = new McpServer({
         name: 'guardlink',
-        version: '1.0.0',
+        version: '1.1.0',
     });
     // ── Tool: guardlink_parse ──
     server.tool('guardlink_parse', 'Parse GuardLink annotations from the project and return the full threat model as JSON', { root: z.string().describe('Project root directory').default('.') }, async ({ root }) => {
@@ -82,13 +82,7 @@ export function createServer() {
     // ── Tool: guardlink_status ──
     server.tool('guardlink_status', 'Return coverage statistics: asset/threat/control counts, unmitigated exposures, coverage percentage', { root: z.string().describe('Project root directory').default('.') }, async ({ root }) => {
         const { model } = await getModel(root);
-        const mitigated = new Set();
-        const accepted = new Set();
-        for (const m of model.mitigations)
-            mitigated.add(`${m.asset}::${m.threat}`);
-        for (const a of model.acceptances)
-            accepted.add(`${a.asset}::${a.threat}`);
-        const unmitigated = model.exposures.filter(e => !mitigated.has(`${e.asset}::${e.threat}`) && !accepted.has(`${e.asset}::${e.threat}`));
+        const unmitigated = findUnmitigatedExposures(model);
         const status = {
             assets: model.assets.length,
             threats: model.threats.length,
@@ -115,23 +109,11 @@ export function createServer() {
     server.tool('guardlink_validate', 'Check annotations for syntax errors, duplicate IDs, and dangling references. Returns structured error list.', { root: z.string().describe('Project root directory').default('.') }, async ({ root }) => {
         invalidateCache();
         const { model, diagnostics } = await getModel(root);
-        // Compute dangling refs
-        const definedIds = new Set();
-        for (const a of model.assets) {
-            if (a.id)
-                definedIds.add(a.id);
-            definedIds.add(a.path.join('.'));
-        }
-        for (const t of model.threats) {
-            if (t.id)
-                definedIds.add(t.id);
-        }
-        for (const c of model.controls) {
-            if (c.id)
-                definedIds.add(c.id);
-        }
-        const errors = diagnostics.filter(d => d.level === 'error');
-        const warnings = diagnostics.filter(d => d.level === 'warning');
+        // Compute dangling refs using shared validation
+        const danglingDiags = findDanglingRefs(model);
+        const allDiags = [...diagnostics, ...danglingDiags];
+        const errors = allDiags.filter(d => d.level === 'error');
+        const warnings = allDiags.filter(d => d.level === 'warning');
         const result = {
             valid: errors.length === 0,
             errors: errors.map(d => ({ file: d.file, line: d.line, message: d.message })),
@@ -169,10 +151,12 @@ export function createServer() {
     server.tool('guardlink_threat_report', 'Generate an AI threat report using a security framework (STRIDE, DREAD, PASTA, attacker, rapid, general). If an LLM API key is set in environment, runs analysis internally and saves result. If no API key is set, returns the framework prompt and serialized threat model for the calling agent to analyze directly — write the result as markdown to .guardlink/threat-reports/.', {
         root: z.string().describe('Project root directory').default('.'),
         framework: z.enum(['stride', 'dread', 'pasta', 'attacker', 'rapid', 'general']).describe('Analysis framework').default('general'),
-        provider: z.string().describe('LLM provider: anthropic, openai, openrouter, deepseek (auto-detected from env)').optional(),
+        provider: z.string().describe('LLM provider: anthropic, openai, google, openrouter, deepseek (auto-detected from env)').optional(),
         model: z.string().describe('Model name override').optional(),
         custom_prompt: z.string().describe('Custom analysis prompt to replace the framework header').optional(),
-    }, async ({ root, framework, provider, model: modelName, custom_prompt }) => {
+        web_search: z.boolean().describe('Enable web search grounding for real-time vulnerability intelligence (OpenAI)').optional(),
+        thinking: z.boolean().describe('Enable extended thinking / reasoning mode (Anthropic, DeepSeek)').optional(),
+    }, async ({ root, framework, provider, model: modelName, custom_prompt, web_search, thinking }) => {
         const { model: threatModel } = await getModel(root);
         if (threatModel.annotations_parsed === 0) {
             return {
@@ -209,6 +193,8 @@ export function createServer() {
                 llmConfig,
                 customPrompt: custom_prompt,
                 stream: false,
+                webSearch: web_search,
+                extendedThinking: thinking,
             });
             return {
                 content: [{ type: 'text', text: JSON.stringify({

package/dist/mcp/server.js.map

@@ -1 +1 @@
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package/dist/parser/index.d.ts

@@ -7,4 +7,5 @@ export type { ParseProjectOptions } from './parse-project.js';
 export { parseLine } from './parse-line.js';
 export { normalizeName, resolveSeverity, unescapeDescription } from './normalize.js';
 export { stripCommentPrefix, commentStyleForExt } from './comment-strip.js';
+export { findDanglingRefs, findUnmitigatedExposures, findAcceptedWithoutAudit, findAcceptedExposures } from './validate.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/parser/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/parser/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,SAAS,EAAE,WAAW,EAAE,MAAM,iBAAiB,CAAC;AACzD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,YAAY,EAAE,mBAAmB,EAAE,MAAM,oBAAoB,CAAC;AAC9D,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,aAAa,EAAE,eAAe,EAAE,mBAAmB,EAAE,MAAM,gBAAgB,CAAC;AACrF,OAAO,EAAE,kBAAkB,EAAE,kBAAkB,EAAE,MAAM,oBAAoB,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/parser/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,SAAS,EAAE,WAAW,EAAE,MAAM,iBAAiB,CAAC;AACzD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,YAAY,EAAE,mBAAmB,EAAE,MAAM,oBAAoB,CAAC;AAC9D,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,aAAa,EAAE,eAAe,EAAE,mBAAmB,EAAE,MAAM,gBAAgB,CAAC;AACrF,OAAO,EAAE,kBAAkB,EAAE,kBAAkB,EAAE,MAAM,oBAAoB,CAAC;AAC5E,OAAO,EAAE,gBAAgB,EAAE,wBAAwB,EAAE,wBAAwB,EAAE,qBAAqB,EAAE,MAAM,eAAe,CAAC"}

package/dist/parser/index.js

@@ -6,4 +6,5 @@ export { parseProject } from './parse-project.js';
 export { parseLine } from './parse-line.js';
 export { normalizeName, resolveSeverity, unescapeDescription } from './normalize.js';
 export { stripCommentPrefix, commentStyleForExt } from './comment-strip.js';
+export { findDanglingRefs, findUnmitigatedExposures, findAcceptedWithoutAudit, findAcceptedExposures } from './validate.js';
 //# sourceMappingURL=index.js.map

package/dist/parser/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/parser/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,SAAS,EAAE,WAAW,EAAE,MAAM,iBAAiB,CAAC;AACzD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAElD,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,aAAa,EAAE,eAAe,EAAE,mBAAmB,EAAE,MAAM,gBAAgB,CAAC;AACrF,OAAO,EAAE,kBAAkB,EAAE,kBAAkB,EAAE,MAAM,oBAAoB,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/parser/index.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,SAAS,EAAE,WAAW,EAAE,MAAM,iBAAiB,CAAC;AACzD,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAElD,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAC5C,OAAO,EAAE,aAAa,EAAE,eAAe,EAAE,mBAAmB,EAAE,MAAM,gBAAgB,CAAC;AACrF,OAAO,EAAE,kBAAkB,EAAE,kBAAkB,EAAE,MAAM,oBAAoB,CAAC;AAC5E,OAAO,EAAE,gBAAgB,EAAE,wBAAwB,EAAE,wBAAwB,EAAE,qBAAqB,EAAE,MAAM,eAAe,CAAC"}

package/dist/parser/parse-line.js

@@ -32,7 +32,7 @@ const PATTERNS = {
     accepts: new RegExp(String.raw `^@accepts\s+(${THREAT_REF})\s+on\s+(${ASSET_REF})(?:\s+${DESC})?$`),
     accepts_v1: new RegExp(String.raw `^@accepts\s+(${THREAT_REF})\s+to\s+(${ASSET_REF})(?:\s+${DESC})?$`),
     transfers: new RegExp(String.raw `^@transfers\s+(${THREAT_REF})\s+from\s+(${ASSET_REF})\s+to\s+(${ASSET_REF})(?:\s+${DESC})?$`),
-    flows: new RegExp(String.raw `^@flows\s+(${ASSET_REF})\s+->\s+(${ASSET_REF})(?:\s+via\s+(.+?))?(?:\s+${DESC})?$`),
+    flows: new RegExp(String.raw `^@flows\s+(${ASSET_REF})\s+->\s+(${ASSET_REF})(?:\s+via\s+((?:(?!\s+--\s*").)+?))?(?:\s+${DESC})?$`),
     boundary: new RegExp(String.raw `^@boundary\s+(?:between\s+)?(${ASSET_REF})\s+and\s+(${ASSET_REF})(?:\s+${ID_DEF})?(?:\s+${DESC})?$`),
     boundary_pipe: new RegExp(String.raw `^@boundary\s+(${ASSET_REF})\s*\|\s*(${ASSET_REF})(?:\s+${ID_DEF})?(?:\s+${DESC})?$`),
     connects_v1: new RegExp(String.raw `^@connects\s+(${ASSET_REF})\s+to\s+(${ASSET_REF})(?:\s+${DESC})?$`),
@@ -46,7 +46,7 @@ const PATTERNS = {
     // Comment — developer note, description only
     comment: new RegExp(String.raw `^@comment(?:\s+${DESC})?$`),
     // Special
-    shield: new RegExp(String.raw `^@shield(?:\s+${DESC})?$`),
+    shield: new RegExp(String.raw `^@shield(?!:)(?:\s+${DESC})?$`),
     shield_begin: new RegExp(String.raw `^@shield:begin(?:\s+${DESC})?$`),
     shield_end: /^@shield:end$/,
 };
@@ -58,7 +58,7 @@ function extractExternalRefs(raw) {
 }
 // ─── Ref resolver: #id or Name → string ──────────────────────────────
 function resolveRef(ref) {
-    return ref.startsWith('#') ? ref : ref;
+    return ref;
 }
 /**
  * Parse a single annotation line (after comment prefix has been stripped).

package/dist/parser/parse-line.js.map

@@ -1 +1 @@
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package/dist/parser/parse-project.js

@@ -89,7 +89,7 @@ function getAnnotationId(ann) {
 }
 function assembleModel(annotations, fileCount, project) {
     const model = {
-        version: '1.0.0',
+        version: '1.1.0',
         project,
         generated_at: new Date().toISOString(),
         source_files: fileCount,

package/dist/parser/validate.d.ts

@@ -0,0 +1,31 @@
+/**
+ * GuardLink — Shared validation helpers.
+ *
+ * Extracted from cli/index.ts and tui/commands.ts to eliminate duplication
+ * and ensure consistent validation logic across all entry points.
+ */
+import type { ThreatModel, ThreatModelExposure, ParseDiagnostic } from '../types/index.js';
+/**
+ * Find all dangling #id references in the threat model.
+ * A dangling ref is a #id used in a relationship/lifecycle annotation
+ * that was never defined via @asset, @threat, @control, or @boundary.
+ */
+export declare function findDanglingRefs(model: ThreatModel): ParseDiagnostic[];
+/**
+ * Find exposures that have no matching @mitigates or @accepts.
+ * Normalizes refs so that #id and bare-name forms are compared consistently.
+ */
+export declare function findUnmitigatedExposures(model: ThreatModel): ThreatModelExposure[];
+/**
+ * Find @accepts annotations where the accepted asset has no corresponding @audit.
+ * Risk acceptance without an audit trail is a governance concern — the acceptance
+ * may be rubber-stamped (e.g., by an AI agent) rather than a deliberate human decision.
+ */
+export declare function findAcceptedWithoutAudit(model: ThreatModel): ParseDiagnostic[];
+/**
+ * Find exposures that are covered ONLY by @accepts (no real @mitigates).
+ * These are "accepted but unmitigated" — the risk exists and no control is in place.
+ * Useful for dashboards and reports to distinguish real mitigations from risk acceptance.
+ */
+export declare function findAcceptedExposures(model: ThreatModel): ThreatModelExposure[];
+//# sourceMappingURL=validate.d.ts.map

package/dist/parser/validate.d.ts.map

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package/dist/parser/validate.js

@@ -0,0 +1,149 @@
+/**
+ * GuardLink — Shared validation helpers.
+ *
+ * Extracted from cli/index.ts and tui/commands.ts to eliminate duplication
+ * and ensure consistent validation logic across all entry points.
+ */
+/**
+ * Find all dangling #id references in the threat model.
+ * A dangling ref is a #id used in a relationship/lifecycle annotation
+ * that was never defined via @asset, @threat, @control, or @boundary.
+ */
+export function findDanglingRefs(model) {
+    const diagnostics = [];
+    // Collect all defined IDs
+    const definedIds = new Set();
+    for (const a of model.assets)
+        if (a.id)
+            definedIds.add(a.id);
+    for (const t of model.threats)
+        if (t.id)
+            definedIds.add(t.id);
+    for (const c of model.controls)
+        if (c.id)
+            definedIds.add(c.id);
+    for (const b of model.boundaries)
+        if (b.id)
+            definedIds.add(b.id);
+    const checkRef = (ref, loc) => {
+        if (ref.startsWith('#')) {
+            const id = ref.slice(1);
+            if (!definedIds.has(id)) {
+                diagnostics.push({
+                    level: 'warning',
+                    message: `Dangling reference: #${id} is never defined`,
+                    file: loc.file,
+                    line: loc.line,
+                });
+            }
+        }
+    };
+    // Relationship annotations — check both threat/control AND asset refs
+    for (const m of model.mitigations) {
+        checkRef(m.asset, m.location);
+        checkRef(m.threat, m.location);
+        if (m.control)
+            checkRef(m.control, m.location);
+    }
+    for (const e of model.exposures) {
+        checkRef(e.asset, e.location);
+        checkRef(e.threat, e.location);
+    }
+    for (const a of model.acceptances) {
+        checkRef(a.asset, a.location);
+        checkRef(a.threat, a.location);
+    }
+    for (const t of model.transfers) {
+        checkRef(t.threat, t.location);
+        checkRef(t.source, t.location);
+        checkRef(t.target, t.location);
+    }
+    for (const f of model.flows) {
+        checkRef(f.source, f.location);
+        checkRef(f.target, f.location);
+    }
+    for (const b of model.boundaries) {
+        checkRef(b.asset_a, b.location);
+        checkRef(b.asset_b, b.location);
+    }
+    // Lifecycle annotations — check asset refs
+    for (const v of model.validations) {
+        checkRef(v.control, v.location);
+        checkRef(v.asset, v.location);
+    }
+    for (const a of model.audits)
+        checkRef(a.asset, a.location);
+    for (const o of model.ownership)
+        checkRef(o.asset, o.location);
+    for (const h of model.data_handling)
+        checkRef(h.asset, h.location);
+    for (const a of model.assumptions)
+        checkRef(a.asset, a.location);
+    return diagnostics;
+}
+/**
+ * Normalize a ref for matching: strip leading # so that
+ * "#sqli" and "sqli" compare equal.
+ */
+function normalizeRef(ref) {
+    return ref.startsWith('#') ? ref.slice(1) : ref;
+}
+/**
+ * Find exposures that have no matching @mitigates or @accepts.
+ * Normalizes refs so that #id and bare-name forms are compared consistently.
+ */
+export function findUnmitigatedExposures(model) {
+    const covered = new Set();
+    for (const m of model.mitigations) {
+        covered.add(`${normalizeRef(m.asset)}::${normalizeRef(m.threat)}`);
+    }
+    for (const a of model.acceptances) {
+        covered.add(`${normalizeRef(a.asset)}::${normalizeRef(a.threat)}`);
+    }
+    return model.exposures.filter(e => !covered.has(`${normalizeRef(e.asset)}::${normalizeRef(e.threat)}`));
+}
+/**
+ * Find @accepts annotations where the accepted asset has no corresponding @audit.
+ * Risk acceptance without an audit trail is a governance concern — the acceptance
+ * may be rubber-stamped (e.g., by an AI agent) rather than a deliberate human decision.
+ */
+export function findAcceptedWithoutAudit(model) {
+    const diagnostics = [];
+    // Build set of audited assets (normalized)
+    const auditedAssets = new Set();
+    for (const a of model.audits) {
+        auditedAssets.add(normalizeRef(a.asset));
+    }
+    for (const acc of model.acceptances) {
+        const assetNorm = normalizeRef(acc.asset);
+        if (!auditedAssets.has(assetNorm)) {
+            diagnostics.push({
+                level: 'warning',
+                message: `@accepts ${acc.threat} on ${acc.asset} without @audit — risk acceptance should be paired with @audit for traceability`,
+                file: acc.location.file,
+                line: acc.location.line,
+            });
+        }
+    }
+    return diagnostics;
+}
+/**
+ * Find exposures that are covered ONLY by @accepts (no real @mitigates).
+ * These are "accepted but unmitigated" — the risk exists and no control is in place.
+ * Useful for dashboards and reports to distinguish real mitigations from risk acceptance.
+ */
+export function findAcceptedExposures(model) {
+    const mitigated = new Set();
+    for (const m of model.mitigations) {
+        mitigated.add(`${normalizeRef(m.asset)}::${normalizeRef(m.threat)}`);
+    }
+    const accepted = new Set();
+    for (const a of model.acceptances) {
+        accepted.add(`${normalizeRef(a.asset)}::${normalizeRef(a.threat)}`);
+    }
+    return model.exposures.filter(e => {
+        const key = `${normalizeRef(e.asset)}::${normalizeRef(e.threat)}`;
+        return accepted.has(key) && !mitigated.has(key);
+    });
+}
+//# sourceMappingURL=validate.js.map