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-  "/api/session/command/route": "app/api/session/command/route.js",
   "/api/session/events/route": "app/api/session/events/route.js",
+  "/api/session/command/route": "app/api/session/command/route.js",
+  "/api/files/route": "app/api/files/route.js",
   "/api/session/manage/route": "app/api/session/manage/route.js",
   "/api/settings-data/route": "app/api/settings-data/route.js",
   "/api/shutdown/route": "app/api/shutdown/route.js",
   "/api/skill-health/route": "app/api/skill-health/route.js",
-  "/api/steer/route": "app/api/steer/route.js",
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-  "/api/files/route": "app/api/files/route.js",
-  "/api/terminal/resize/route": "app/api/terminal/resize/route.js",
+  "/api/steer/route": "app/api/steer/route.js",
   "/api/switch-root/route": "app/api/switch-root/route.js",
+  "/api/terminal/resize/route": "app/api/terminal/resize/route.js",
+  "/api/terminal/stream/route": "app/api/terminal/stream/route.js",
   "/api/terminal/sessions/route": "app/api/terminal/sessions/route.js",
-  "/api/terminal/upload/route": "app/api/terminal/upload/route.js",
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-  "/api/terminal/stream/route": "app/api/terminal/stream/route.js",
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-  "/api/update/route": "app/api/update/route.js",
   "/api/remote-questions/route": "app/api/remote-questions/route.js",
+  "/api/terminal/upload/route": "app/api/terminal/upload/route.js",
+  "/api/update/route": "app/api/update/route.js",
   "/page": "app/page.js"
 }

package/dist/web/standalone/.next/server/middleware-build-manifest.js

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package/dist/web/standalone/.next/server/middleware-manifest.json

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+        "__NEXT_BUILD_ID": "iBwPQUj73sn8jxegTo320",
+        "NEXT_SERVER_ACTIONS_ENCRYPTION_KEY": "YzSqy8y2guHKX9MvQtOchzcDJo2xGiJ3zRWYsl8Ec3M=",
+        "__NEXT_PREVIEW_MODE_ID": "0722084ad2669233876da2376ee8ba17",
+        "__NEXT_PREVIEW_MODE_SIGNING_KEY": "443f8ba73853a0d84ceb8c6dafd40844bbf7c3ba581b8d3a6fd128588d16e991",
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package/dist/web/standalone/.next/server/server-reference-manifest.json

@@ -1 +1 @@
-{"node":{},"edge":{},"encryptionKey":"L9W+BtTrZUBNnxvvD6rTPjldItPxuOErRIQhjgLnJrQ="}
+{"node":{},"edge":{},"encryptionKey":"YzSqy8y2guHKX9MvQtOchzcDJo2xGiJ3zRWYsl8Ec3M="}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "gsd-pi",
-  "version": "2.75.0-dev.96d4bb599",
+  "version": "2.75.0-dev.a44b82572",
   "description": "GSD — Get Shit Done coding agent",
   "license": "MIT",
   "repository": {

package/packages/pi-coding-agent/dist/cli/args.d.ts

@@ -21,6 +21,12 @@ export interface Args {
     sessionDir?: string;
     models?: string[];
     tools?: ToolName[];
+    /**
+     * Tool names from --tools that did not match a built-in. These are
+     * deferred to extension/MCP tool resolution after extensions register
+     * their tools in the agent runtime.
+     */
+    extraToolNames?: string[];
     noTools?: boolean;
     extensions?: string[];
     noExtensions?: boolean;

package/packages/pi-coding-agent/dist/cli/args.d.ts.map

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package/packages/pi-coding-agent/dist/cli/args.js

@@ -65,17 +65,27 @@ export function parseArgs(args, extensionFlags) {
             result.noTools = true;
         }
         else if (arg === "--tools" && i + 1 < args.length) {
-            const toolNames = args[++i].split(",").map((s) => s.trim());
+            const toolNames = args[++i].split(",").map((s) => s.trim()).filter(Boolean);
+            // Built-in registry keys are lowercase. Match case-insensitively so that
+            // frontmatter like `tools: Read, Bash` resolves correctly.
+            const builtinByLower = new Map(Object.keys(allTools).map((n) => [n.toLowerCase(), n]));
             const validTools = [];
+            const extras = [];
             for (const name of toolNames) {
-                if (name in allTools) {
-                    validTools.push(name);
+                const builtin = builtinByLower.get(name.toLowerCase());
+                if (builtin) {
+                    validTools.push(builtin);
                 }
                 else {
-                    console.error(chalk.yellow(`Warning: Unknown tool "${name}". Valid tools: ${Object.keys(allTools).join(", ")}`));
+                    // Defer: this may be an extension/MCP-provided tool that has not
+                    // been registered yet at parse time. Resolution happens after
+                    // extensions load in AgentSession._buildRuntime.
+                    extras.push(name);
                 }
             }
             result.tools = validTools;
+            if (extras.length > 0)
+                result.extraToolNames = extras;
         }
         else if (arg === "--thinking" && i + 1 < args.length) {
             const level = args[++i];

package/packages/pi-coding-agent/dist/cli/args.js.map

@@ -1 +1 @@
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* CLI argument parsing and help display\n */\n\nimport type { ThinkingLevel } from \"@gsd/pi-agent-core\";\nimport chalk from \"chalk\";\nimport { APP_NAME, CONFIG_DIR_NAME, ENV_AGENT_DIR } from \"../config.js\";\nimport { allTools, type ToolName } from \"../core/tools/index.js\";\n\nexport type Mode = \"text\" | \"json\" | \"rpc\";\n\nexport interface Args {\n\tprovider?: string;\n\tmodel?: string;\n\tapiKey?: string;\n\tsystemPrompt?: string;\n\tappendSystemPrompt?: string;\n\tthinking?: ThinkingLevel;\n\tcontinue?: boolean;\n\tresume?: boolean;\n\thelp?: boolean;\n\tversion?: boolean;\n\tmode?: Mode;\n\tnoSession?: boolean;\n\tsession?: string;\n\tsessionDir?: string;\n\tmodels?: string[];\n\ttools?: ToolName[];\n\tnoTools?: boolean;\n\textensions?: string[];\n\tnoExtensions?: boolean;\n\tprint?: boolean;\n\texport?: string;\n\tnoSkills?: boolean;\n\tskills?: string[];\n\tpromptTemplates?: string[];\n\tnoPromptTemplates?: boolean;\n\tthemes?: string[];\n\tnoThemes?: boolean;\n\tlistModels?: string | true;\n\tdiscover?: boolean;\n\taddProvider?: string;\n\taddProviderBaseUrl?: string;\n\taddProviderApiKey?: string;\n\tdiscoverModels?: string | true;\n\toffline?: boolean;\n\tverbose?: boolean;\n\tmessages: string[];\n\tfileArgs: string[];\n\t/** Unknown flags (potentially extension flags) - map of flag name to value */\n\tunknownFlags: Map<string, boolean | string>;\n\t/** --bare: suppress CLAUDE.md/AGENTS.md, user skills, prompt templates, themes, project preferences */\n\tbare?: boolean;\n}\n\nconst VALID_THINKING_LEVELS = [\"off\", \"minimal\", \"low\", \"medium\", \"high\", \"xhigh\"] as const;\n\nexport function isValidThinkingLevel(level: string): level is ThinkingLevel {\n\treturn VALID_THINKING_LEVELS.includes(level as ThinkingLevel);\n}\n\nexport function parseArgs(args: string[], extensionFlags?: Map<string, { type: \"boolean\" | \"string\" }>): Args {\n\tconst result: Args = {\n\t\tmessages: [],\n\t\tfileArgs: [],\n\t\tunknownFlags: new Map(),\n\t};\n\n\tfor (let i = 0; i < args.length; i++) {\n\t\tconst arg = args[i];\n\n\t\tif (arg === \"--help\" || arg === \"-h\") {\n\t\t\tresult.help = true;\n\t\t} else if (arg === \"--version\" || arg === \"-v\") {\n\t\t\tresult.version = true;\n\t\t} else if (arg === \"--mode\" && i + 1 < args.length) {\n\t\t\tconst mode = args[++i];\n\t\t\tif (mode === \"text\" || mode === \"json\" || mode === \"rpc\") {\n\t\t\t\tresult.mode = mode;\n\t\t\t}\n\t\t} else if (arg === \"--continue\" || arg === \"-c\") {\n\t\t\tresult.continue = true;\n\t\t} else if (arg === \"--resume\" || arg === \"-r\") {\n\t\t\tresult.resume = true;\n\t\t} else if (arg === \"--provider\" && i + 1 < args.length) {\n\t\t\tresult.provider = args[++i];\n\t\t} else if (arg === \"--model\" && i + 1 < args.length) {\n\t\t\tresult.model = args[++i];\n\t\t} else if (arg === \"--api-key\" && i + 1 < args.length) {\n\t\t\tresult.apiKey = args[++i];\n\t\t} else if (arg === \"--system-prompt\" && i + 1 < args.length) {\n\t\t\tresult.systemPrompt = args[++i];\n\t\t} else if (arg === \"--append-system-prompt\" && i + 1 < args.length) {\n\t\t\tresult.appendSystemPrompt = args[++i];\n\t\t} else if (arg === \"--no-session\") {\n\t\t\tresult.noSession = true;\n\t\t} else if (arg === \"--session\" && i + 1 < args.length) {\n\t\t\tresult.session = args[++i];\n\t\t} else if (arg === \"--session-dir\" && i + 1 < args.length) {\n\t\t\tresult.sessionDir = args[++i];\n\t\t} else if (arg === \"--models\" && i + 1 < args.length) {\n\t\t\tresult.models = args[++i].split(\",\").map((s) => s.trim());\n\t\t} else if (arg === \"--no-tools\") {\n\t\t\tresult.noTools = true;\n\t\t} else if (arg === \"--tools\" && i + 1 < args.length) {\n\t\t\tconst toolNames = args[++i].split(\",\").map((s) => s.trim());\n\t\t\tconst validTools: ToolName[] = [];\n\t\t\tfor (const name of toolNames) {\n\t\t\t\tif (name in allTools) {\n\t\t\t\t\tvalidTools.push(name as ToolName);\n\t\t\t\t} else {\n\t\t\t\t\tconsole.error(\n\t\t\t\t\t\tchalk.yellow(`Warning: Unknown tool \"${name}\". Valid tools: ${Object.keys(allTools).join(\", \")}`),\n\t\t\t\t\t);\n\t\t\t\t}\n\t\t\t}\n\t\t\tresult.tools = validTools;\n\t\t} else if (arg === \"--thinking\" && i + 1 < args.length) {\n\t\t\tconst level = args[++i];\n\t\t\tif (isValidThinkingLevel(level)) {\n\t\t\t\tresult.thinking = level;\n\t\t\t} else {\n\t\t\t\tconsole.error(\n\t\t\t\t\tchalk.yellow(\n\t\t\t\t\t\t`Warning: Invalid thinking level \"${level}\". Valid values: ${VALID_THINKING_LEVELS.join(\", \")}`,\n\t\t\t\t\t),\n\t\t\t\t);\n\t\t\t}\n\t\t} else if (arg === \"--print\" || arg === \"-p\") {\n\t\t\tresult.print = true;\n\t\t} else if (arg === \"--export\" && i + 1 < args.length) {\n\t\t\tresult.export = args[++i];\n\t\t} else if ((arg === \"--extension\" || arg === \"-e\") && i + 1 < args.length) {\n\t\t\tresult.extensions = result.extensions ?? [];\n\t\t\tresult.extensions.push(args[++i]);\n\t\t} else if (arg === \"--no-extensions\" || arg === \"-ne\") {\n\t\t\tresult.noExtensions = true;\n\t\t} else if (arg === \"--skill\" && i + 1 < args.length) {\n\t\t\tresult.skills = result.skills ?? [];\n\t\t\tresult.skills.push(args[++i]);\n\t\t} else if (arg === \"--prompt-template\" && i + 1 < args.length) {\n\t\t\tresult.promptTemplates = result.promptTemplates ?? [];\n\t\t\tresult.promptTemplates.push(args[++i]);\n\t\t} else if (arg === \"--theme\" && i + 1 < args.length) {\n\t\t\tresult.themes = result.themes ?? [];\n\t\t\tresult.themes.push(args[++i]);\n\t\t} else if (arg === \"--no-skills\" || arg === \"-ns\") {\n\t\t\tresult.noSkills = true;\n\t\t} else if (arg === \"--no-prompt-templates\" || arg === \"-np\") {\n\t\t\tresult.noPromptTemplates = true;\n\t\t} else if (arg === \"--no-themes\") {\n\t\t\tresult.noThemes = true;\n\t\t} else if (arg === \"--list-models\") {\n\t\t\t// Check if next arg is a search pattern (not a flag or file arg)\n\t\t\tif (i + 1 < args.length && !args[i + 1].startsWith(\"-\") && !args[i + 1].startsWith(\"@\")) {\n\t\t\t\tresult.listModels = args[++i];\n\t\t\t} else {\n\t\t\t\tresult.listModels = true;\n\t\t\t}\n\t\t} else if (arg === \"--discover\") {\n\t\t\tresult.discover = true;\n\t\t} else if (arg === \"--add-provider\" && i + 1 < args.length) {\n\t\t\tresult.addProvider = args[++i];\n\t\t} else if (arg === \"--base-url\" && i + 1 < args.length) {\n\t\t\tresult.addProviderBaseUrl = args[++i];\n\t\t} else if (arg === \"--discover-models\") {\n\t\t\tif (i + 1 < args.length && !args[i + 1].startsWith(\"-\") && !args[i + 1].startsWith(\"@\")) {\n\t\t\t\tresult.discoverModels = args[++i];\n\t\t\t} else {\n\t\t\t\tresult.discoverModels = true;\n\t\t\t}\n\t\t} else if (arg === \"--verbose\") {\n\t\t\tresult.verbose = true;\n\t\t} else if (arg === \"--bare\") {\n\t\t\tresult.bare = true;\n\t\t} else if (arg === \"--offline\") {\n\t\t\tresult.offline = true;\n\t\t} else if (arg.startsWith(\"@\")) {\n\t\t\tresult.fileArgs.push(arg.slice(1)); // Remove @ prefix\n\t\t} else if (arg.startsWith(\"--\") && extensionFlags) {\n\t\t\t// Check if it's an extension-registered flag\n\t\t\tconst flagName = arg.slice(2);\n\t\t\tconst extFlag = extensionFlags.get(flagName);\n\t\t\tif (extFlag) {\n\t\t\t\tif (extFlag.type === \"boolean\") {\n\t\t\t\t\tresult.unknownFlags.set(flagName, true);\n\t\t\t\t} else if (extFlag.type === \"string\" && i + 1 < args.length) {\n\t\t\t\t\tresult.unknownFlags.set(flagName, args[++i]);\n\t\t\t\t}\n\t\t\t}\n\t\t\t// Unknown flags without extensionFlags are silently ignored (first pass)\n\t\t} else if (!arg.startsWith(\"-\")) {\n\t\t\tresult.messages.push(arg);\n\t\t}\n\t}\n\n\treturn result;\n}\n\nexport function printHelp(): void {\n\tconsole.log(`${chalk.bold(APP_NAME)} - AI coding assistant with read, bash, edit, write tools\n\n${chalk.bold(\"Usage:\")}\n  ${APP_NAME} [options] [@files...] [messages...]\n\n${chalk.bold(\"Commands:\")}\n  ${APP_NAME} install <source> [-l]    Install extension source and add to settings\n  ${APP_NAME} remove <source> [-l]     Remove extension source from settings\n  ${APP_NAME} update [source]          Update installed extensions (skips pinned sources)\n  ${APP_NAME} list                     List installed extensions from settings\n  ${APP_NAME} config                   Open TUI to enable/disable package resources\n  ${APP_NAME} <command> --help         Show help for install/remove/update/list\n\n${chalk.bold(\"Options:\")}\n  --provider <name>              Provider name (default: google)\n  --model <pattern>              Model pattern or ID (supports \"provider/id\" and optional \":<thinking>\")\n  --api-key <key>                API key (defaults to env vars)\n  --system-prompt <text>         System prompt (default: coding assistant prompt)\n  --append-system-prompt <text>  Append text or file contents to the system prompt\n  --mode <mode>                  Output mode: text (default), json, or rpc\n  --print, -p                    Non-interactive mode: process prompt and exit\n  --continue, -c                 Continue previous session\n  --resume, -r                   Select a session to resume\n  --session <path>               Use specific session file\n  --session-dir <dir>            Directory for session storage and lookup\n  --no-session                   Don't save session (ephemeral)\n  --models <patterns>            Comma-separated model patterns for Ctrl+P cycling\n                                 Supports globs (anthropic/*, *sonnet*) and fuzzy matching\n  --no-tools                     Disable all built-in tools\n  --tools <tools>                Comma-separated list of tools to enable (default: read,bash,edit,write)\n                                 Available: read, bash, edit, write, lsp, grep, find, ls\n  --thinking <level>             Set thinking level: off, minimal, low, medium, high, xhigh\n  --extension, -e <path>         Load an extension file (can be used multiple times)\n  --no-extensions, -ne           Disable extension discovery (explicit -e paths still work)\n  --skill <path>                 Load a skill file or directory (can be used multiple times)\n  --no-skills, -ns               Disable skills discovery and loading\n  --prompt-template <path>       Load a prompt template file or directory (can be used multiple times)\n  --no-prompt-templates, -np     Disable prompt template discovery and loading\n  --theme <path>                 Load a theme file or directory (can be used multiple times)\n  --no-themes                    Disable theme discovery and loading\n  --export <file>                Export session file to HTML and exit\n  --list-models [search]         List available models (with optional fuzzy search)\n  --discover                     Include discovered models in --list-models output\n  --discover-models [provider]   Discover models from provider APIs (all or specific)\n  --add-provider <name>          Add a provider to models.json (use with --base-url, --api-key)\n  --base-url <url>               Base URL for --add-provider\n  --verbose                      Force verbose startup (overrides quietStartup setting)\n  --offline                      Disable startup network operations (same as PI_OFFLINE=1)\n  --help, -h                     Show this help\n  --version, -v                  Show version number\n\nExtensions can register additional flags (e.g., --plan from plan-mode extension).\n\n${chalk.bold(\"Examples:\")}\n  # Interactive mode\n  ${APP_NAME}\n\n  # Interactive mode with initial prompt\n  ${APP_NAME} \"List all .ts files in src/\"\n\n  # Include files in initial message\n  ${APP_NAME} @prompt.md @image.png \"What color is the sky?\"\n\n  # Non-interactive mode (process and exit)\n  ${APP_NAME} -p \"List all .ts files in src/\"\n\n  # Multiple messages (interactive)\n  ${APP_NAME} \"Read package.json\" \"What dependencies do we have?\"\n\n  # Continue previous session\n  ${APP_NAME} --continue \"What did we discuss?\"\n\n  # Use different model\n  ${APP_NAME} --provider openai --model gpt-4o-mini \"Help me refactor this code\"\n\n  # Use model with provider prefix (no --provider needed)\n  ${APP_NAME} --model openai/gpt-4o \"Help me refactor this code\"\n\n  # Use model with thinking level shorthand\n  ${APP_NAME} --model sonnet:high \"Solve this complex problem\"\n\n  # Limit model cycling to specific models\n  ${APP_NAME} --models claude-sonnet,claude-haiku,gpt-4o\n\n  # Limit to a specific provider with glob pattern\n  ${APP_NAME} --models \"github-copilot/*\"\n\n  # Cycle models with fixed thinking levels\n  ${APP_NAME} --models sonnet:high,haiku:low\n\n  # Start with a specific thinking level\n  ${APP_NAME} --thinking high \"Solve this complex problem\"\n\n  # Read-only mode (no file modifications possible)\n  ${APP_NAME} --tools read,grep,find,ls -p \"Review the code in src/\"\n\n  # Export a session file to HTML\n  ${APP_NAME} --export ~/${CONFIG_DIR_NAME}/agent/sessions/--path--/session.jsonl\n  ${APP_NAME} --export session.jsonl output.html\n\n${chalk.bold(\"Environment Variables:\")}\n  ANTHROPIC_API_KEY                - Anthropic Claude API key\n  ANTHROPIC_OAUTH_TOKEN            - Anthropic OAuth token (alternative to API key)\n  OPENAI_API_KEY                   - OpenAI GPT API key\n  AZURE_OPENAI_API_KEY             - Azure OpenAI API key\n  AZURE_OPENAI_BASE_URL            - Azure OpenAI base URL (https://{resource}.openai.azure.com/openai/v1)\n  AZURE_OPENAI_RESOURCE_NAME       - Azure OpenAI resource name (alternative to base URL)\n  AZURE_OPENAI_API_VERSION         - Azure OpenAI API version (default: v1)\n  AZURE_OPENAI_DEPLOYMENT_NAME_MAP - Azure OpenAI model=deployment map (comma-separated)\n  GEMINI_API_KEY                   - Google Gemini API key\n  GROQ_API_KEY                     - Groq API key\n  CEREBRAS_API_KEY                 - Cerebras API key\n  XAI_API_KEY                      - xAI Grok API key\n  OPENROUTER_API_KEY               - OpenRouter API key\n  AI_GATEWAY_API_KEY               - Vercel AI Gateway API key\n  ZAI_API_KEY                      - ZAI API key\n  MISTRAL_API_KEY                  - Mistral API key\n  OLLAMA_API_KEY                   - Ollama Cloud API key\n  MINIMAX_API_KEY                  - MiniMax API key\n  OPENCODE_API_KEY                 - OpenCode Zen/OpenCode Go API key\n  KIMI_API_KEY                     - Kimi For Coding API key\n  AWS_PROFILE                      - AWS profile for Amazon Bedrock\n  AWS_ACCESS_KEY_ID                - AWS access key for Amazon Bedrock\n  AWS_SECRET_ACCESS_KEY            - AWS secret key for Amazon Bedrock\n  AWS_BEARER_TOKEN_BEDROCK         - Bedrock API key (bearer token)\n  AWS_REGION                       - AWS region for Amazon Bedrock (e.g., us-east-1)\n  ${ENV_AGENT_DIR.padEnd(32)} - Session storage directory (default: ~/${CONFIG_DIR_NAME}/agent)\n  PI_PACKAGE_DIR                   - Override package directory (for Nix/Guix store paths)\n  PI_OFFLINE                       - Disable startup network operations when set to 1/true/yes\n  PI_SHARE_VIEWER_URL              - Base URL for /share command (default: https://pi.dev/session/)\n  PI_AI_ANTIGRAVITY_VERSION        - Override Antigravity User-Agent version (e.g., 1.23.0)\n\n${chalk.bold(\"Available Tools (default: read, bash, edit, write):\")}\n  read   - Read file contents\n  bash   - Execute bash commands\n  edit   - Edit files with find/replace\n  write  - Write files (creates/overwrites)\n  grep   - Search file contents (read-only, off by default)\n  find   - Find files by glob pattern (read-only, off by default)\n  ls     - List directory contents (read-only, off by default)\n`);\n}\n"]}
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These are\n\t * deferred to extension/MCP tool resolution after extensions register\n\t * their tools in the agent runtime.\n\t */\n\textraToolNames?: string[];\n\tnoTools?: boolean;\n\textensions?: string[];\n\tnoExtensions?: boolean;\n\tprint?: boolean;\n\texport?: string;\n\tnoSkills?: boolean;\n\tskills?: string[];\n\tpromptTemplates?: string[];\n\tnoPromptTemplates?: boolean;\n\tthemes?: string[];\n\tnoThemes?: boolean;\n\tlistModels?: string | true;\n\tdiscover?: boolean;\n\taddProvider?: string;\n\taddProviderBaseUrl?: string;\n\taddProviderApiKey?: string;\n\tdiscoverModels?: string | true;\n\toffline?: boolean;\n\tverbose?: boolean;\n\tmessages: string[];\n\tfileArgs: string[];\n\t/** Unknown flags (potentially extension flags) - map of flag name to value */\n\tunknownFlags: Map<string, boolean | string>;\n\t/** --bare: suppress CLAUDE.md/AGENTS.md, user skills, prompt templates, themes, project preferences */\n\tbare?: boolean;\n}\n\nconst VALID_THINKING_LEVELS = [\"off\", \"minimal\", \"low\", \"medium\", \"high\", \"xhigh\"] as const;\n\nexport function isValidThinkingLevel(level: string): level is ThinkingLevel {\n\treturn VALID_THINKING_LEVELS.includes(level as ThinkingLevel);\n}\n\nexport function parseArgs(args: string[], extensionFlags?: Map<string, { type: \"boolean\" | \"string\" }>): Args {\n\tconst result: Args = {\n\t\tmessages: [],\n\t\tfileArgs: [],\n\t\tunknownFlags: new Map(),\n\t};\n\n\tfor (let i = 0; i < args.length; i++) {\n\t\tconst arg = args[i];\n\n\t\tif (arg === \"--help\" || arg === \"-h\") {\n\t\t\tresult.help = true;\n\t\t} else if (arg === \"--version\" || arg === \"-v\") {\n\t\t\tresult.version = true;\n\t\t} else if (arg === \"--mode\" && i + 1 < args.length) {\n\t\t\tconst mode = args[++i];\n\t\t\tif (mode === \"text\" || mode === \"json\" || mode === \"rpc\") {\n\t\t\t\tresult.mode = mode;\n\t\t\t}\n\t\t} else if (arg === \"--continue\" || arg === \"-c\") {\n\t\t\tresult.continue = true;\n\t\t} else if (arg === \"--resume\" || arg === \"-r\") {\n\t\t\tresult.resume = true;\n\t\t} else if (arg === \"--provider\" && i + 1 < args.length) {\n\t\t\tresult.provider = args[++i];\n\t\t} else if (arg === \"--model\" && i + 1 < args.length) {\n\t\t\tresult.model = args[++i];\n\t\t} else if (arg === \"--api-key\" && i + 1 < args.length) {\n\t\t\tresult.apiKey = args[++i];\n\t\t} else if (arg === \"--system-prompt\" && i + 1 < args.length) {\n\t\t\tresult.systemPrompt = args[++i];\n\t\t} else if (arg === \"--append-system-prompt\" && i + 1 < args.length) {\n\t\t\tresult.appendSystemPrompt = args[++i];\n\t\t} else if (arg === \"--no-session\") {\n\t\t\tresult.noSession = true;\n\t\t} else if (arg === \"--session\" && i + 1 < args.length) {\n\t\t\tresult.session = args[++i];\n\t\t} else if (arg === \"--session-dir\" && i + 1 < args.length) {\n\t\t\tresult.sessionDir = args[++i];\n\t\t} else if (arg === \"--models\" && i + 1 < args.length) {\n\t\t\tresult.models = args[++i].split(\",\").map((s) => s.trim());\n\t\t} else if (arg === \"--no-tools\") {\n\t\t\tresult.noTools = true;\n\t\t} else if (arg === \"--tools\" && i + 1 < args.length) {\n\t\t\tconst toolNames = args[++i].split(\",\").map((s) => s.trim()).filter(Boolean);\n\t\t\t// Built-in registry keys are lowercase. Match case-insensitively so that\n\t\t\t// frontmatter like `tools: Read, Bash` resolves correctly.\n\t\t\tconst builtinByLower = new Map<string, ToolName>(\n\t\t\t\tObject.keys(allTools).map((n) => [n.toLowerCase(), n as ToolName]),\n\t\t\t);\n\t\t\tconst validTools: ToolName[] = [];\n\t\t\tconst extras: string[] = [];\n\t\t\tfor (const name of toolNames) {\n\t\t\t\tconst builtin = builtinByLower.get(name.toLowerCase());\n\t\t\t\tif (builtin) {\n\t\t\t\t\tvalidTools.push(builtin);\n\t\t\t\t} else {\n\t\t\t\t\t// Defer: this may be an extension/MCP-provided tool that has not\n\t\t\t\t\t// been registered yet at parse time. Resolution happens after\n\t\t\t\t\t// extensions load in AgentSession._buildRuntime.\n\t\t\t\t\textras.push(name);\n\t\t\t\t}\n\t\t\t}\n\t\t\tresult.tools = validTools;\n\t\t\tif (extras.length > 0) result.extraToolNames = extras;\n\t\t} else if (arg === \"--thinking\" && i + 1 < args.length) {\n\t\t\tconst level = args[++i];\n\t\t\tif (isValidThinkingLevel(level)) {\n\t\t\t\tresult.thinking = level;\n\t\t\t} else {\n\t\t\t\tconsole.error(\n\t\t\t\t\tchalk.yellow(\n\t\t\t\t\t\t`Warning: Invalid thinking level \"${level}\". Valid values: ${VALID_THINKING_LEVELS.join(\", \")}`,\n\t\t\t\t\t),\n\t\t\t\t);\n\t\t\t}\n\t\t} else if (arg === \"--print\" || arg === \"-p\") {\n\t\t\tresult.print = true;\n\t\t} else if (arg === \"--export\" && i + 1 < args.length) {\n\t\t\tresult.export = args[++i];\n\t\t} else if ((arg === \"--extension\" || arg === \"-e\") && i + 1 < args.length) {\n\t\t\tresult.extensions = result.extensions ?? [];\n\t\t\tresult.extensions.push(args[++i]);\n\t\t} else if (arg === \"--no-extensions\" || arg === \"-ne\") {\n\t\t\tresult.noExtensions = true;\n\t\t} else if (arg === \"--skill\" && i + 1 < args.length) {\n\t\t\tresult.skills = result.skills ?? [];\n\t\t\tresult.skills.push(args[++i]);\n\t\t} else if (arg === \"--prompt-template\" && i + 1 < args.length) {\n\t\t\tresult.promptTemplates = result.promptTemplates ?? [];\n\t\t\tresult.promptTemplates.push(args[++i]);\n\t\t} else if (arg === \"--theme\" && i + 1 < args.length) {\n\t\t\tresult.themes = result.themes ?? [];\n\t\t\tresult.themes.push(args[++i]);\n\t\t} else if (arg === \"--no-skills\" || arg === \"-ns\") {\n\t\t\tresult.noSkills = true;\n\t\t} else if (arg === \"--no-prompt-templates\" || arg === \"-np\") {\n\t\t\tresult.noPromptTemplates = true;\n\t\t} else if (arg === \"--no-themes\") {\n\t\t\tresult.noThemes = true;\n\t\t} else if (arg === \"--list-models\") {\n\t\t\t// Check if next arg is a search pattern (not a flag or file arg)\n\t\t\tif (i + 1 < args.length && !args[i + 1].startsWith(\"-\") && !args[i + 1].startsWith(\"@\")) {\n\t\t\t\tresult.listModels = args[++i];\n\t\t\t} else {\n\t\t\t\tresult.listModels = true;\n\t\t\t}\n\t\t} else if (arg === \"--discover\") {\n\t\t\tresult.discover = true;\n\t\t} else if (arg === \"--add-provider\" && i + 1 < args.length) {\n\t\t\tresult.addProvider = args[++i];\n\t\t} else if (arg === \"--base-url\" && i + 1 < args.length) {\n\t\t\tresult.addProviderBaseUrl = args[++i];\n\t\t} else if (arg === \"--discover-models\") {\n\t\t\tif (i + 1 < args.length && !args[i + 1].startsWith(\"-\") && !args[i + 1].startsWith(\"@\")) {\n\t\t\t\tresult.discoverModels = args[++i];\n\t\t\t} else {\n\t\t\t\tresult.discoverModels = true;\n\t\t\t}\n\t\t} else if (arg === \"--verbose\") {\n\t\t\tresult.verbose = true;\n\t\t} else if (arg === \"--bare\") {\n\t\t\tresult.bare = true;\n\t\t} else if (arg === \"--offline\") {\n\t\t\tresult.offline = true;\n\t\t} else if (arg.startsWith(\"@\")) {\n\t\t\tresult.fileArgs.push(arg.slice(1)); // Remove @ prefix\n\t\t} else if (arg.startsWith(\"--\") && extensionFlags) {\n\t\t\t// Check if it's an extension-registered flag\n\t\t\tconst flagName = arg.slice(2);\n\t\t\tconst extFlag = extensionFlags.get(flagName);\n\t\t\tif (extFlag) {\n\t\t\t\tif (extFlag.type === \"boolean\") {\n\t\t\t\t\tresult.unknownFlags.set(flagName, true);\n\t\t\t\t} else if (extFlag.type === \"string\" && i + 1 < args.length) {\n\t\t\t\t\tresult.unknownFlags.set(flagName, args[++i]);\n\t\t\t\t}\n\t\t\t}\n\t\t\t// Unknown flags without extensionFlags are silently ignored (first pass)\n\t\t} else if (!arg.startsWith(\"-\")) {\n\t\t\tresult.messages.push(arg);\n\t\t}\n\t}\n\n\treturn result;\n}\n\nexport function printHelp(): void {\n\tconsole.log(`${chalk.bold(APP_NAME)} - AI coding assistant with read, bash, edit, write tools\n\n${chalk.bold(\"Usage:\")}\n  ${APP_NAME} [options] [@files...] [messages...]\n\n${chalk.bold(\"Commands:\")}\n  ${APP_NAME} install <source> [-l]    Install extension source and add to settings\n  ${APP_NAME} remove <source> [-l]     Remove extension source from settings\n  ${APP_NAME} update [source]          Update installed extensions (skips pinned sources)\n  ${APP_NAME} list                     List installed extensions from settings\n  ${APP_NAME} config                   Open TUI to enable/disable package resources\n  ${APP_NAME} <command> --help         Show help for install/remove/update/list\n\n${chalk.bold(\"Options:\")}\n  --provider <name>              Provider name (default: google)\n  --model <pattern>              Model pattern or ID (supports \"provider/id\" and optional \":<thinking>\")\n  --api-key <key>                API key (defaults to env vars)\n  --system-prompt <text>         System prompt (default: coding assistant prompt)\n  --append-system-prompt <text>  Append text or file contents to the system prompt\n  --mode <mode>                  Output mode: text (default), json, or rpc\n  --print, -p                    Non-interactive mode: process prompt and exit\n  --continue, -c                 Continue previous session\n  --resume, -r                   Select a session to resume\n  --session <path>               Use specific session file\n  --session-dir <dir>            Directory for session storage and lookup\n  --no-session                   Don't save session (ephemeral)\n  --models <patterns>            Comma-separated model patterns for Ctrl+P cycling\n                                 Supports globs (anthropic/*, *sonnet*) and fuzzy matching\n  --no-tools                     Disable all built-in tools\n  --tools <tools>                Comma-separated list of tools to enable (default: read,bash,edit,write)\n                                 Available: read, bash, edit, write, lsp, grep, find, ls\n  --thinking <level>             Set thinking level: off, minimal, low, medium, high, xhigh\n  --extension, -e <path>         Load an extension file (can be used multiple times)\n  --no-extensions, -ne           Disable extension discovery (explicit -e paths still work)\n  --skill <path>                 Load a skill file or directory (can be used multiple times)\n  --no-skills, -ns               Disable skills discovery and loading\n  --prompt-template <path>       Load a prompt template file or directory (can be used multiple times)\n  --no-prompt-templates, -np     Disable prompt template discovery and loading\n  --theme <path>                 Load a theme file or directory (can be used multiple times)\n  --no-themes                    Disable theme discovery and loading\n  --export <file>                Export session file to HTML and exit\n  --list-models [search]         List available models (with optional fuzzy search)\n  --discover                     Include discovered models in --list-models output\n  --discover-models [provider]   Discover models from provider APIs (all or specific)\n  --add-provider <name>          Add a provider to models.json (use with --base-url, --api-key)\n  --base-url <url>               Base URL for --add-provider\n  --verbose                      Force verbose startup (overrides quietStartup setting)\n  --offline                      Disable startup network operations (same as PI_OFFLINE=1)\n  --help, -h                     Show this help\n  --version, -v                  Show version number\n\nExtensions can register additional flags (e.g., --plan from plan-mode extension).\n\n${chalk.bold(\"Examples:\")}\n  # Interactive mode\n  ${APP_NAME}\n\n  # Interactive mode with initial prompt\n  ${APP_NAME} \"List all .ts files in src/\"\n\n  # Include files in initial message\n  ${APP_NAME} @prompt.md @image.png \"What color is the sky?\"\n\n  # Non-interactive mode (process and exit)\n  ${APP_NAME} -p \"List all .ts files in src/\"\n\n  # Multiple messages (interactive)\n  ${APP_NAME} \"Read package.json\" \"What dependencies do we have?\"\n\n  # Continue previous session\n  ${APP_NAME} --continue \"What did we discuss?\"\n\n  # Use different model\n  ${APP_NAME} --provider openai --model gpt-4o-mini \"Help me refactor this code\"\n\n  # Use model with provider prefix (no --provider needed)\n  ${APP_NAME} --model openai/gpt-4o \"Help me refactor this code\"\n\n  # Use model with thinking level shorthand\n  ${APP_NAME} --model sonnet:high \"Solve this complex problem\"\n\n  # Limit model cycling to specific models\n  ${APP_NAME} --models claude-sonnet,claude-haiku,gpt-4o\n\n  # Limit to a specific provider with glob pattern\n  ${APP_NAME} --models \"github-copilot/*\"\n\n  # Cycle models with fixed thinking levels\n  ${APP_NAME} --models sonnet:high,haiku:low\n\n  # Start with a specific thinking level\n  ${APP_NAME} --thinking high \"Solve this complex problem\"\n\n  # Read-only mode (no file modifications possible)\n  ${APP_NAME} --tools read,grep,find,ls -p \"Review the code in src/\"\n\n  # Export a session file to HTML\n  ${APP_NAME} --export ~/${CONFIG_DIR_NAME}/agent/sessions/--path--/session.jsonl\n  ${APP_NAME} --export session.jsonl output.html\n\n${chalk.bold(\"Environment Variables:\")}\n  ANTHROPIC_API_KEY                - Anthropic Claude API key\n  ANTHROPIC_OAUTH_TOKEN            - Anthropic OAuth token (alternative to API key)\n  OPENAI_API_KEY                   - OpenAI GPT API key\n  AZURE_OPENAI_API_KEY             - Azure OpenAI API key\n  AZURE_OPENAI_BASE_URL            - Azure OpenAI base URL (https://{resource}.openai.azure.com/openai/v1)\n  AZURE_OPENAI_RESOURCE_NAME       - Azure OpenAI resource name (alternative to base URL)\n  AZURE_OPENAI_API_VERSION         - Azure OpenAI API version (default: v1)\n  AZURE_OPENAI_DEPLOYMENT_NAME_MAP - Azure OpenAI model=deployment map (comma-separated)\n  GEMINI_API_KEY                   - Google Gemini API key\n  GROQ_API_KEY                     - Groq API key\n  CEREBRAS_API_KEY                 - Cerebras API key\n  XAI_API_KEY                      - xAI Grok API key\n  OPENROUTER_API_KEY               - OpenRouter API key\n  AI_GATEWAY_API_KEY               - Vercel AI Gateway API key\n  ZAI_API_KEY                      - ZAI API key\n  MISTRAL_API_KEY                  - Mistral API key\n  OLLAMA_API_KEY                   - Ollama Cloud API key\n  MINIMAX_API_KEY                  - MiniMax API key\n  OPENCODE_API_KEY                 - OpenCode Zen/OpenCode Go API key\n  KIMI_API_KEY                     - Kimi For Coding API key\n  AWS_PROFILE                      - AWS profile for Amazon Bedrock\n  AWS_ACCESS_KEY_ID                - AWS access key for Amazon Bedrock\n  AWS_SECRET_ACCESS_KEY            - AWS secret key for Amazon Bedrock\n  AWS_BEARER_TOKEN_BEDROCK         - Bedrock API key (bearer token)\n  AWS_REGION                       - AWS region for Amazon Bedrock (e.g., us-east-1)\n  ${ENV_AGENT_DIR.padEnd(32)} - Session storage directory (default: ~/${CONFIG_DIR_NAME}/agent)\n  PI_PACKAGE_DIR                   - Override package directory (for Nix/Guix store paths)\n  PI_OFFLINE                       - Disable startup network operations when set to 1/true/yes\n  PI_SHARE_VIEWER_URL              - Base URL for /share command (default: https://pi.dev/session/)\n  PI_AI_ANTIGRAVITY_VERSION        - Override Antigravity User-Agent version (e.g., 1.23.0)\n\n${chalk.bold(\"Available Tools (default: read, bash, edit, write):\")}\n  read   - Read file contents\n  bash   - Execute bash commands\n  edit   - Edit files with find/replace\n  write  - Write files (creates/overwrites)\n  grep   - Search file contents (read-only, off by default)\n  find   - Find files by glob pattern (read-only, off by default)\n  ls     - List directory contents (read-only, off by default)\n`);\n}\n"]}

package/packages/pi-coding-agent/dist/cli/args.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=args.test.d.ts.map

package/packages/pi-coding-agent/dist/cli/args.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"args.test.d.ts","sourceRoot":"","sources":["../../src/cli/args.test.ts"],"names":[],"mappings":""}

package/packages/pi-coding-agent/dist/cli/args.test.js

@@ -0,0 +1,38 @@
+// Regression tests for #4479: subagents launching with empty tools list when
+// --tools includes capitalized built-in names or extension/MCP tool names.
+import test, { describe } from "node:test";
+import assert from "node:assert/strict";
+import { parseArgs } from "./args.js";
+describe("#4479 — --tools parsing", () => {
+    test("matches built-in names case-insensitively", () => {
+        const args = parseArgs(["--tools", "Read,Bash,Edit,Write"]);
+        assert.deepEqual(args.tools, ["read", "bash", "edit", "write"]);
+        assert.equal(args.extraToolNames, undefined);
+    });
+    test("preserves lowercase built-in names unchanged", () => {
+        const args = parseArgs(["--tools", "read,bash"]);
+        assert.deepEqual(args.tools, ["read", "bash"]);
+        assert.equal(args.extraToolNames, undefined);
+    });
+    test("defers unrecognized names as extraToolNames (likely extension/MCP)", () => {
+        const args = parseArgs(["--tools", "read,gsd_complete_task,browser_navigate"]);
+        assert.deepEqual(args.tools, ["read"]);
+        assert.deepEqual(args.extraToolNames, ["gsd_complete_task", "browser_navigate"]);
+    });
+    test("normalizes only the built-in match; extras keep original casing", () => {
+        const args = parseArgs(["--tools", "Read,GSD_Complete_Task"]);
+        assert.deepEqual(args.tools, ["read"]);
+        assert.deepEqual(args.extraToolNames, ["GSD_Complete_Task"]);
+    });
+    test("filters empty entries from comma-separated list", () => {
+        const args = parseArgs(["--tools", "read,,bash, , "]);
+        assert.deepEqual(args.tools, ["read", "bash"]);
+        assert.equal(args.extraToolNames, undefined);
+    });
+    test("only-extension-tools input yields empty tools but populated extras", () => {
+        const args = parseArgs(["--tools", "gsd_complete_task"]);
+        assert.deepEqual(args.tools, []);
+        assert.deepEqual(args.extraToolNames, ["gsd_complete_task"]);
+    });
+});
+//# sourceMappingURL=args.test.js.map