grnsight 5.0.0 → 5.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (189) hide show
  1. package/.travis.yml +1 -1
  2. package/package.json +5 -5
  3. package/server/app.js +4 -2
  4. package/server/controllers/database-controller.js +9 -8
  5. package/server/controllers/exporters/xlsx.js +27 -9
  6. package/test/export-tests.js +2 -2
  7. package/test/test.js +3 -1
  8. package/test-files/expression-data-test-sheets/expression_sheet_missing_data_ok_export_exact.xlsx +0 -0
  9. package/web-client/app.js +1 -1
  10. package/web-client/controllers/main.js +1 -1
  11. package/web-client/public/js/constants.js +4 -1
  12. package/web-client/public/js/update-app.js +8 -11
  13. package/web-client/public/js/upload.js +337 -11
  14. package/web-client/views/{graph.jade → graph.pug} +0 -0
  15. package/web-client/views/{info.jade → info.pug} +1 -5
  16. package/web-client/views/{upload.jade → upload.pug} +47 -4
  17. package/documents/SDF/CMSI_402/spring_2014/Southwick_CMSI402_Spring2014_software-development-plan.md +0 -71
  18. package/documents/SDF/CMSI_402/spring_2014/Southwick_CMSI402_Spring2014_software-requirements-specification.md +0 -71
  19. package/documents/SDF/CMSI_402/spring_2014/use-case-diagram-spring-2014.jpg +0 -0
  20. package/documents/SDF/CMSI_402/spring_2017/Anguiano_402_Final_Presentation.pptx +0 -0
  21. package/documents/SDF/CMSI_402/spring_2017/Anguiano_402_Presentation_Final_Poster.pdf +0 -0
  22. package/documents/SDF/CMSI_402/spring_2017/Anguiano_CMSI402_Spring2017_project-proposal-presentation.pptx +0 -0
  23. package/documents/SDF/CMSI_402/spring_2017/Anguiano_CMSI402_Spring2017_project-proposal.docx +0 -0
  24. package/documents/SDF/CMSI_402/spring_2017/Anguiano_CMSI402_Spring2017_software-development-plan.docx +0 -0
  25. package/documents/SDF/CMSI_402/spring_2017/Anguiano_CMSI402_Spring2017_software-requirements-specification.docx +0 -0
  26. package/documents/SDF/CMSI_402/spring_2017/Design Review Presentation.pptx +0 -0
  27. package/documents/SDF/CMSI_402/spring_2018/0402report.docx +0 -0
  28. package/documents/SDF/CMSI_402/spring_2018/0409report.docx +0 -0
  29. package/documents/SDF/CMSI_402/spring_2018/402-gantt.png +0 -0
  30. package/documents/SDF/CMSI_402/spring_2018/402SRS_GRNSightFeedback01.txt +0 -28
  31. package/documents/SDF/CMSI_402/spring_2018/402_SPD.md +0 -223
  32. package/documents/SDF/CMSI_402/spring_2018/ChoeShinCMSI402_Final.pptx +0 -0
  33. package/documents/SDF/CMSI_402/spring_2018/ProjectProposal.md +0 -22
  34. package/documents/SDF/CMSI_402/spring_2018/SoftwareRequirementsSpecification.md +0 -88
  35. package/documents/SDF/CMSI_402/spring_2018/homework/choe_eileen/Choe_Eileen_CMSI 402_HW1.pdf +0 -0
  36. package/documents/SDF/CMSI_402/spring_2018/homework/choe_eileen/Choe_Eileen_CMSI402_HW2.pdf +0 -0
  37. package/documents/SDF/CMSI_402/spring_2018/homework/shin_jen/402hw2.docx +0 -0
  38. package/documents/SDF/CMSI_402/spring_2018/homework/shin_jen/Jen - 402Hw1.docx +0 -0
  39. package/documents/SDF/CMSI_402/spring_2018/homework/shin_jen/Jen - hw3.docx +0 -0
  40. package/documents/SDF/CMSI_402/spring_2018/writtenStatusReport.docx +0 -0
  41. package/documents/SDF/CMSI_402/spring_2018/writtenStatusReport4 +0 -0
  42. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Expression Database Schema.pdf +0 -0
  43. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/ExpressionDbLayoutImage.jpg +0 -0
  44. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/ExpressionDbLayoutImageSmall.jpg +0 -0
  45. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Filler_Patterson_CMSI402_Poster.pptx +0 -0
  46. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/GRNsight Final Presentation.pdf +0 -0
  47. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Project Proposal Doc.pdf +0 -0
  48. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Project Proposal Presentation.pdf +0 -0
  49. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Software Development Plan/GANTT Chart.xlsx +0 -0
  50. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Software Development Plan/Software Development Plan.pdf +0 -0
  51. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Software Development Plan (Updated)/GANTT Chart (Updated).xlsx +0 -0
  52. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Software Development Plan (Updated)/Software Development Plan (Updated).pdf +0 -0
  53. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Software Requirements Specification (Updated).pdf +0 -0
  54. package/documents/SDF/CMSI_402/spring_2020/Alexia Filler/Software Requirements Specification.pdf +0 -0
  55. package/documents/SDF/CMSI_402/spring_2020/Kevin Patterson/402 GANTT Chart - Sheet1.pdf +0 -0
  56. package/documents/SDF/CMSI_402/spring_2020/Kevin Patterson/402 GRNsight SDP.pdf +0 -0
  57. package/documents/SDF/CMSI_402/spring_2020/Kevin Patterson/402 SRS.pdf +0 -0
  58. package/documents/SDF/CMSI_402/spring_2020/Kevin Patterson/FINAL GRNSIGHT PRESENTATION.pdf +0 -0
  59. package/documents/SDF/CMSI_402/spring_2020/Kevin Patterson/GRNsight Presentation.pdf +0 -0
  60. package/documents/SDF/CMSI_402/spring_2020/Kevin Patterson/Project Proposal 402.pdf +0 -0
  61. package/documents/SDF/CMSI_402/spring_2020/Kevin Patterson/SDP Updated/402 GANTT Chart UPDATED - Sheet1.pdf +0 -0
  62. package/documents/SDF/CMSI_402/spring_2020/Kevin Patterson/SDP Updated/402 GRNsight SDP UPDATED.pdf +0 -0
  63. package/documents/SDF/CMSI_402/spring_2020/Kevin Patterson/SRS Update/402 SRS Final.pdf +0 -0
  64. package/documents/abstracts/Anguiano_Varshneya_Undergraduate-Research-Symposium_2017_abstract.pdf +0 -0
  65. package/documents/abstracts/Dahlquist_Dionisio_et-al_BOSC_2020_abstract.pdf +0 -0
  66. package/documents/abstracts/SIGGRAPH 2017 Abstract/ACM-Reference-Format.bst +0 -3478
  67. package/documents/abstracts/SIGGRAPH 2017 Abstract/Figure1_zoom100.png +0 -0
  68. package/documents/abstracts/SIGGRAPH 2017 Abstract/acmart.cls +0 -2352
  69. package/documents/abstracts/SIGGRAPH 2017 Abstract/acmart.ins +0 -29
  70. package/documents/abstracts/SIGGRAPH 2017 Abstract/always-weights.png +0 -0
  71. package/documents/abstracts/SIGGRAPH 2017 Abstract/auto.png +0 -0
  72. package/documents/abstracts/SIGGRAPH 2017 Abstract/networkA.png +0 -0
  73. package/documents/abstracts/SIGGRAPH 2017 Abstract/networkB-normalized.png +0 -0
  74. package/documents/abstracts/SIGGRAPH 2017 Abstract/networkB.png +0 -0
  75. package/documents/abstracts/SIGGRAPH 2017 Abstract/never-weights.png +0 -0
  76. package/documents/abstracts/SIGGRAPH 2017 Abstract/representative-image/screenshot.jpg +0 -0
  77. package/documents/abstracts/SIGGRAPH 2017 Abstract/representative-image/screenshot3x2.png +0 -0
  78. package/documents/abstracts/SIGGRAPH 2017 Abstract/representative-image/withweights3x2.png +0 -0
  79. package/documents/abstracts/SIGGRAPH 2017 Abstract/screenshot-auto.png +0 -0
  80. package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.bib +0 -85
  81. package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.pdf +0 -0
  82. package/documents/abstracts/SIGGRAPH 2017 Abstract/siggraph-abstract-review.tex +0 -235
  83. package/documents/abstracts/SWE Collegiate Competition 2017.md +0 -9
  84. package/documents/abstracts/Samdarshi_GRNsight_SoCalSysBio_Abstract_2019.docx +0 -0
  85. package/documents/abstracts/Varshneya_Samdarshi_Southern-California-Systems-Biology_2017_abstract.docx +0 -0
  86. package/documents/abstracts/~$mdarshi_SoCalSysBio_Abstract_2019.docx +0 -0
  87. package/documents/developer_documents/State Diagram.graphml +0 -3525
  88. package/documents/developer_documents/graphml/State Diagram.graphml +0 -3115
  89. package/documents/developer_documents/older_versions/GRNsight State Diagram old.png +0 -0
  90. package/documents/developer_documents/older_versions/GRNsight State Diagram.png +0 -0
  91. package/documents/developer_documents/testing_script_generator/GRNsightTestingDocument.md +0 -1016
  92. package/documents/developer_documents/testing_script_generator/edgeFeatures.json +0 -178
  93. package/documents/developer_documents/testing_script_generator/fileFeatures.json +0 -100
  94. package/documents/developer_documents/testing_script_generator/layoutFeatures.json +0 -166
  95. package/documents/developer_documents/testing_script_generator/nodeFeatures.json +0 -195
  96. package/documents/developer_documents/testing_script_generator/speciesFeatures.json +0 -30
  97. package/documents/developer_documents/testing_script_generator/testing-script-generator.js +0 -172
  98. package/documents/developer_documents/testing_script_generator/viewFeatures.json +0 -82
  99. package/documents/developer_documents/testing_script_generator/viewportFeatures.json +0 -50
  100. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_conference-presentations_2016.docx +0 -0
  101. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_manuscript_2016.docx +0 -0
  102. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_manuscript_2016_Table1.docx +0 -0
  103. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_manuscript_2016_references.rtf +0 -264
  104. package/documents/manuscripts/peerj-computerscience-2016/GRNsight_PeerJ-CS_manuscript_2016_text-only.docx +0 -0
  105. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/21-genes_31-edges_Schade-data_for-screenshots.xlsx +0 -0
  106. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom100.jpg +0 -0
  107. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom100.png +0 -0
  108. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom100.psd +0 -0
  109. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom145.jpg +0 -0
  110. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom145.png +0 -0
  111. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom145.psd +0 -0
  112. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure1_zoom145_900pix-wide.psd +0 -0
  113. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom100.jpg +0 -0
  114. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom100.png +0 -0
  115. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom100.psd +0 -0
  116. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom145.jpg +0 -0
  117. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom145.png +0 -0
  118. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom145.psd +0 -0
  119. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure2_zoom145_900pix-wide.psd +0 -0
  120. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5A.pdf +0 -0
  121. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5B.pdf +0 -0
  122. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5C.eps +0 -0
  123. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5D.pdf +0 -0
  124. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5E.pdf +0 -0
  125. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5F.eps +0 -0
  126. package/documents/manuscripts/peerj-computerscience-2016/figures/other-versions/Figure5_compiled.png +0 -0
  127. package/documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure1_zoom145_900pix-wide.png +0 -0
  128. package/documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure2_zoom145_900pix-wide.png +0 -0
  129. package/documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure3_GRNsight-Architecture.pdf +0 -0
  130. package/documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure4_GRNsight-Screenshot.pdf +0 -0
  131. package/documents/manuscripts/peerj-computerscience-2016/figures/submitted-versions/Figure5_compiled.pdf +12 -5383
  132. package/documents/manuscripts/peerj-computerscience-2016/peerj-reviewing-10823-v0.pdf +0 -0
  133. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_conference-presentations_2016_revised.docx +0 -0
  134. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_cover-letter-and-response_2016.pdf +0 -0
  135. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_cover-letter_2016.docx +0 -0
  136. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_cover-letter_2016.pdf +0 -0
  137. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_Table1.docx +0 -0
  138. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_references_revised.rtf +0 -385
  139. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_text-only_revised.docx +0 -0
  140. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_manuscript_2016_text-only_revised_marked.docx +0 -0
  141. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_response-to-reviewers_2016.docx +0 -0
  142. package/documents/manuscripts/peerj-computerscience-2016/revisions/GRNsight_PeerJ-CS_response-to-reviewers_2016.pdf +0 -0
  143. package/documents/manuscripts/peerj-computerscience-2016/revisions/figures/Figure3_GRNsight-Architecture.pdf +0 -0
  144. package/documents/manuscripts/peerj-computerscience-2016/revisions/figures/Figure4_GRNsight-Screenshot-auto.pdf +0 -0
  145. package/documents/manuscripts/peerj-computerscience-2016/revisions/figures/Figure4_GRNsight-Screenshot.pdf +0 -0
  146. package/documents/manuscripts/peerj-computerscience-2016/revisions/peerj-reviewing-10823-v1.pdf +0 -0
  147. package/documents/posters/Anguiano_CMSI402_2017.pptx +0 -0
  148. package/documents/posters/Anguiano_Varshneya_LMU-Symposium_2015.pptx +0 -0
  149. package/documents/posters/Anguiano_Varshneya_SCCUR_2014.pptx +0 -0
  150. package/documents/posters/Choe_Shin_CMSI402_2018.pptx +0 -0
  151. package/documents/posters/Dahlquist-et-al_BOSC_ISMB_2016_poster.pptx +0 -0
  152. package/documents/posters/Filler_Patterson_CMSI402_Poster.pptx +0 -0
  153. package/documents/posters/Igbinedion_Green_Mersaghian_LMU_SYMPOSIUM_2021.pptx +0 -0
  154. package/documents/posters/Lopez_Filler_LMU_Symposium_2019.pdf +0 -0
  155. package/documents/posters/Lopez_Filler_LMU_Symposium_2019.pptx +0 -0
  156. package/documents/posters/Samdarshi-et-al_LMU-Symposium_2017.pptx +0 -0
  157. package/documents/posters/Samdarshi-et-al_LMU-Symposium_2018.pptx +0 -0
  158. package/documents/posters/Samdarshi-et-al_SoCalSysBio_2019.pptx +0 -0
  159. package/documents/posters/Shin-et-al_SCCUR_2017.pptx +0 -0
  160. package/documents/posters/Southwick_CMSI402_2014.pptx +0 -0
  161. package/documents/posters/Varshneya_Samdarshi_LMU-Symposium_2016.pptx +0 -0
  162. package/documents/posters/Varshneya_Samdarshi_SoCalSysBio_2017.pptx +0 -0
  163. package/documents/presentations/Anguiano_402_Final_Presentation.pptx +0 -0
  164. package/documents/presentations/Choe_SWERapidFire2017_final.pptx +0 -0
  165. package/documents/presentations/Dahlquist_BCC2020_20200720_talk.pptx +0 -0
  166. package/documents/presentations/Dahlquist_BOSC_20160709.pptx +0 -0
  167. package/documents/presentations/Dahlquist_ExperimentalBiology_20160404_talk.pptx +0 -0
  168. package/documents/presentations/Dahlquist_GRNsight_BCC2020_20200720_lightning-talk_video.mp4 +0 -0
  169. package/documents/presentations/Dahlquist_SoCalSysBio_20150131_talk.pptx +0 -0
  170. package/documents/presentations/Filler_Patterson_CMSI402_Presentation_20200501.pdf +0 -0
  171. package/documents/presentations/Filler_Patterson_LMU-Symposium_20200418_talk.pdf +0 -0
  172. package/documents/presentations/Samdarshi_LMU-Symposium_20190323_talk.pdf +0 -0
  173. package/documents/presentations/Samdarshi_LMU-Symposium_20190323_talk.pptx +0 -0
  174. package/documents/presentations/Southwick_Anguiano_LMU-Symposium_20140329_talk.pptx +0 -0
  175. package/documents/presentations/Southwick_CMSI402_Presentation_20140508_talk.pptx +0 -0
  176. package/documents/presentations/Varshneya_Anguiano_LMU-Symposium_201703_talk.pptx +0 -0
  177. package/documents/reports/Samdarshi_Mihir_2019/Samdarshi_2019_Final.docx +0 -0
  178. package/documents/reports/Samdarshi_Mihir_2019/Samdarshi_Mihir_2019_AnnotatedBibliography.docx +0 -0
  179. package/documents/reports/Samdarshi_Mihir_2019/Samdarshi_Mihir_2019_Outline.docx +0 -0
  180. package/documents/reports/Samdarshi_Mihir_2019/~$mdarshi_2019_Draft.docx +0 -0
  181. package/documents/reports/Samdarshi_Mihir_2019/~$mdarshi_2019_Final_Paper_Draft.docx +0 -0
  182. package/documents/reports/Varshneya_Anu_2017/Varshneya-201701-AnnotatedBibliography.docx +0 -0
  183. package/documents/reports/Varshneya_Anu_2017/Varshneya-201702-Introduction.docx +0 -0
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  185. package/documents/reports/Varshneya_Anu_2017/Varshneya-201703-Discussion.docx +0 -0
  186. package/documents/reports/Varshneya_Anu_2017/Varshneya-201703-MMResults.docx +0 -0
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  189. package/onlysidebar.html +0 -8
@@ -1,1016 +0,0 @@
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- ## GRNsight Client Side Testing Overview
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- Last Updated: 2021-09-09
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-
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- | ID | Included in Testing Protocol | GRNsight Option | User Action | Result |
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- | ---- | --------------- | ------ | ------- | ------ |
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- |e1|NO | Dropdown Menu: Edge -> Enable Edge Coloring Based on Weight Value|Check | GRNsight should enable edge coloring and set the sidebar menu 'Enable Edge Coloring' to checked|
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- |e1|NO | Dropdown Menu: Edge -> Enable Edge Coloring Based on Weight Value|Uncheck | GRNsight should disable edge coloring and set the sidebar menu 'Enable Edge Coloring' to unchecked|
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- |e2|NO | Sidebar Menu: Enable Edge Coloring|Check | GRNsight should enable edge coloring and set the dropdown menu 'Enable Edge Coloring Based on Weight Value' to checked|
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- |e2|NO | Sidebar Menu: Enable Edge Coloring|Uncheck | GRNsight should disable edge coloring and set the dropdown menu 'Enable Edge Coloring Based on Weight Value' to unchecked|
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- |e3|NO | Sidebar Menu: Hide/Show Edge Weights|Select "Show With Mouse Over" | A single edge weight should display when user mouses over a single edge.|
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- |e3|NO | Sidebar Menu: Hide/Show Edge Weights|Select "Always Show Edge Weights" | All edge weights should always be visible.|
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- |e3|NO | Sidebar Menu: Hide/Show Edge Weights|Select "Never Show Edge Weights" | No edge weights should be visible.|
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- |e4|NO | Dropdown Menu: Edge -> Hide/Show Edge Weights|Check "Show With Mouse Over" | A single edge weight should display when user mouses over a single edge.|
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- |e4|NO | Dropdown Menu: Edge -> Hide/Show Edge Weights|Check "Always Show Edge Weights" | All edge weights should always be visible.|
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- |e4|NO | Dropdown Menu: Edge -> Hide/Show Edge Weights|Check "Never Show Edge Weights" | No edge weights should be visible.|
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- |e5|NO | Sidebar Menu: Edge Weight Normalization Factor|Enter a Number in the Box and Click "Set Factor" button | The graph should reload with the new normalization factor applied to its edge weight thicknesses|
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- |e6|NO | Dropdown Menu: Edge -> Edge Weight Normalization Factor|Enter a Number in the Box and Press Enter | The graph should reload with the new normalization factor applied to its edge weight thicknesses|
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- |e7|NO | Sidebar Menu: Reset Factor Button|Click | The graph should reset to its default normalization factor and reload the graph|
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- |e8|NO | Dropdown Menu: Edge -> Reset Edge Weight Normalization|Click | The graph should reset to its default normalization factor and reload the graph|
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- |e9|NO | Sidebar Menu: Gray Threshold Slider|Change the Grey Threshold Value | The graph should reload, with edges that fall below the threshold value colored gray|
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- |e10|NO | Dropdown Menu: Edge -> Gray Threshold Input Box|Change the Grey Threshold Value and Press Enter | The graph should reload, with edges that fall below the threshold value colored gray|
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- |e11|NO | Sidebar Menu: Show Grey Edges as Dashed Checkbox|Uncheck | The graph should show gray lines as solid lines|
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- |e11|NO | Sidebar Menu: Show Grey Edges as Dashed Checkbox|Check | The graph should show gray lines as dashed lines|
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- |e12|NO | Dropdown Menu: Edge -> Show Grey Edges as Dashed|Uncheck | The graph should show gray lines as solid lines|
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- |e12|NO | Dropdown Menu: Edge -> Show Grey Edges as Dashed|Check | The graph should show gray lines as dashed lines|
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- |f1|NO | Dropdown Menu: Help|Select "Getting Started" | GRNsight should open the GRNsight documentation page|
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- |f1|NO | Dropdown Menu: Help|Select "GRNsight Wiki" | GRNsight should open the GRNsight wiki page|
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- |f1|NO | Dropdown Menu: Help|Select "About GRNsight" | GRNsight should open the About GRNsight page|
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- |f2|NO | Load Graph|None | GRNsight should have no graph in the viewport|
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- |f2|NO | Load Graph|Dropdown Menu: File -> Open File | GRNsight should lay out a network graph from the Excel, SIF, or GraphML network if there are no errors in the file|
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- |f2|NO | Load Graph|Dropdown Menu: Demo -> Demo #1 | GRNsight should lay out an unweighted network graph from Demo #1|
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- |f2|NO | Load Graph|Dropdown Menu: Demo -> Demo #2 | GRNsight should lay out a weighted network graph from Demo #2|
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- |f2|NO | Load Graph|Dropdown Menu: Demo -> Demo #3 | GRNsight should lay out an unweighted network graph from Demo #3|
34
- |f2|NO | Load Graph|Dropdown Menu: Demo -> Demo #4 | GRNsight should lay out a weighted network graph from Demo #4|
35
- |f3|NO | Dropdown Menu: File -> Reload|Select | The graph should center, zoom to 100%, and reapply the force graph parameters|
36
- |f4|NO | Dropdown Menu: File -> Export Data|Select "To Unweighted SIF" | GRNsight should export an unweighted SIF file from the graph currently loaded|
37
- |f4|NO | Dropdown Menu: File -> Export Data|Select "To Weighted SIF" | GRNsight should export a weighted SIF file from the graph currently loaded|
38
- |f4|NO | Dropdown Menu: File -> Export Data|Select "To Unweighted GraphML" | GRNsight should export an unweighted GraphML file from the graph currently loaded|
39
- |f4|NO | Dropdown Menu: File -> Export Data|Select "To Weighted GraphML" | GRNsight should export a weighted GraphML file from the graph currently loaded|
40
- |f4|NO | Dropdown Menu: File -> Export Data|Select "To Unweighted Excel" | GRNsight should export an unweighted Excel file from the graph currently loaded|
41
- |f4|NO | Dropdown Menu: File -> Export Data|Select "To Weighted Excel" | GRNsight should export a weighted Excel file from the graph currently loaded|
42
- |f5|NO | Dropdown Menu: File -> Export Image|Select "To PNG" | GRNsight should export a PNG image from the graph currently loaded|
43
- |f5|NO | Dropdown Menu: File -> Export Image|Select "To SVG" | GRNsight should export a SVG image from the graph currently loaded|
44
- |f5|NO | Dropdown Menu: File -> Export Image|Select "To PDF" | GRNsight should export a PDF file from the graph currently loaded|
45
- |f6|NO | Dropdown Menu: File -> Print|Select | GRNsight should open the Print Dialogue Box|
46
- |l1|YES | Sidebar Menu: Grid Layout|Keep at Default | The graph should default to force graph layout|
47
- |l1|YES | Sidebar Menu: Grid Layout|Click Grid Layout Button | The graph should change to grid layout|
48
- |l1|YES | Sidebar Menu: Grid Layout|Click Force Graph Layout Button | The graph should change to force graph layout|
49
- |l2|NO | Dropdown Menu: Layout -> Graph Options|Keep at Default | The graph should be in force graph layout by default|
50
- |l2|NO | Dropdown Menu: Layout -> Graph Options|Grid Layout | The graph should apply grid layout|
51
- |l2|NO | Dropdown Menu: Layout -> Graph Options|Force Graph | The graph should apply force graph layout|
52
- |l3|NO | Dropdown Menu: Layout -> Lock Force Graph Parameters|Check "Lock Force Graph Parameters" | The Force Graph Parameter sliders should be disabled.|
53
- |l3|NO | Dropdown Menu: Layout -> Lock Force Graph Parameters|Uncheck "Lock Force Graph Parameters" | The Force Graph Parameter sliders should be enabled.|
54
- |l4|NO | Dropdown Menu: Layout -> Reset Force Graph Parameters|Click "Reset Force Graph Parameters" | The force graph parameters should revert to the default values, if Lock Force Graph Parameters is unchecked|
55
- |l5|NO | Dropdown Menu: Layout -> Undo Reset|Click "Undo Reset" | The force graph parameters should return to the values they had before the Undo Reset button (or menu item) was selected, if Undo Reset is enabled.|
56
- |l6|NO | Dropdown Menu: Layout -> Link Distance|Input Value, then Press Enter | The graph's edges should visibly change in length to the value entered if Lock Force Graph Parameters is unchecked|
57
- |l7|NO | Dropdown Menu: Layout -> Charge|Input Value, then Press Enter | The graph's nodes should visibly change it's level of attraction to each other to the value entered if Lock Force Graph Parameters is unchecked|
58
- |l8|NO | Sidebar Menu: Force Graph Parameter Sliders|Keep at Default Values | The graph should be laid out according to the default values of the force graph parameter sliders|
59
- |l8|NO | Sidebar Menu: Force Graph Parameter Sliders|Decrease Link Distance | The graph's edges should visibly decrease in length if Lock Force Graph Parameters is unchecked|
60
- |l8|NO | Sidebar Menu: Force Graph Parameter Sliders|Increase Link Distance | The graph's edges should visibly increase in length if Lock Force Graph Parameters is unchecked|
61
- |l8|NO | Sidebar Menu: Force Graph Parameter Sliders|Increase Charge | The graph's nodes should visibly increase attraction to each other if Lock Force Graph Parameters is unchecked|
62
- |l8|NO | Sidebar Menu: Force Graph Parameter Sliders|Decrease Charge | The graph's nodes should visibly decrease attraction to each other if Lock Force Graph Parameters is unchecked|
63
- |l9|NO | Sidebar Menu: Lock Force Graph Parameters Checkbox|Check | The Force Graph Parameter sliders should be disabled.|
64
- |l9|NO | Sidebar Menu: Lock Force Graph Parameters Checkbox|Uncheck | The Force Graph Parameter sliders should be enabled.|
65
- |l10|NO | Sidebar Menu: Reset Force Graph Parameters Button|Click | The Force Graph Parameter sliders should revert to the default values, if Lock Force Graph Parameters is unchecked.|
66
- |l11|NO | Sidebar Menu: Undo Reset Button|Click | The Force Graph Parameter sliders should return to the values they had before the Undo Reset button (or menu item) was selected, if the Undo Reset button is enabled.|
67
- |n1|NO | Sidebar Menu: Top Dataset|Keep Default Selection | The top half of each node should be colored using data from the first expression dataset detected in the input workbook, if expression data sheets are present in input workbook|
68
- |n1|NO | Sidebar Menu: Top Dataset|Select Top Dataset from Dropdown List | The top half of each node should be colored using data from the selected dataset, if expression data sheets are present in input workbook|
69
- |n2|NO | Dropdown Menu: Node -> Select Top Dataset|Keep Default Selection | The top half of each node should be colored using data from the first expression dataset detected in the input workbook, if expression data sheets are present in input workbook|
70
- |n2|NO | Dropdown Menu: Node -> Select Top Dataset|Check New Top Dataset from Dropdown List | The top half of each node should be colored using data from the selected dataset, if expression data sheets are present in input workbook|
71
- |n3|NO | Sidebar Menu: Bottom Dataset|Keep Default Selection | The bottom half of each node should be colored using data from the same dataset as the top dataset, if expression data sheets are present in input workbook|
72
- |n3|NO | Sidebar Menu: Bottom Dataset|Select Bottom Dataset from Dropdown List | The bottom half of each node should be colored using data from the selected dataset, if expression data sheets are present in input workbook|
73
- |n4|NO | Dropdown Menu: Node -> Select Bottom Dataset|Keep Default Selection | The bottom half of each node should be colored using data from the same dataset as the top dataset, if expression data sheets are present in input workbook|
74
- |n4|NO | Dropdown Menu: Node -> Select Bottom Dataset|Check New Bottom Dataset from Dropdown List | The bottom half of each node should be colored using data from the selected dataset, if expression data sheets are present in input workbook|
75
- |n5|NO | Sidebar Menu: Log Fold Change Max Value|Keep Default Value | The node coloring visualization's color intensity should default to having a Log Fold Change Max Value of 3, if expression data sheets are present in input workbook|
76
- |n5|NO | Sidebar Menu: Log Fold Change Max Value|Increase Log Fold Change Max Value | The node coloring visualization's color intensity should decrease, if expression data sheets are present in input workbook|
77
- |n5|NO | Sidebar Menu: Log Fold Change Max Value|Decrease Log Fold Change Max Value | The node coloring visualization's color intensity should increase, if expression data sheets are present in input workbook|
78
- |n6|NO | Dropdown Menu: Node -> Log Fold Change Max Value|Keep Default Value | The node coloring visualization's color intensity should default to having a Log Fold Change Max Value of 3, if expression data sheets are present in input workbook|
79
- |n6|NO | Dropdown Menu: Node -> Log Fold Change Max Value|Increase Log Fold Change Max Value | The node coloring visualization's color intensity should decrease, if expression data sheets are present in input workbook|
80
- |n6|NO | Dropdown Menu: Node -> Log Fold Change Max Value|Decrease Log Fold Change Max Value | The node coloring visualization's color intensity should increase, if expression data sheets are present in input workbook|
81
- |n7|NO | Sidebar Menu: Average Replicates Values (Top Dataset)|Check | GRNsight should average replicate values for top dataset, if expression data sheets are present in input workbook|
82
- |n7|NO | Sidebar Menu: Average Replicates Values (Top Dataset)|Uncheck | GRNsight should not average replicate values for top dataset, if expression data sheets are present in input workbook|
83
- |n8|NO | Dropdown Menu: Node -> Average Replicates Values (Top Dataset)|Check | GRNsight should average replicate values for top dataset, if expression data sheets are present in input workbook|
84
- |n8|NO | Dropdown Menu: Node -> Average Replicates Values (Top Dataset)|Uncheck | GRNsight should not average replicate values for top dataset, if expression data sheets are present in input workbook|
85
- |n9|NO | Sidebar Menu: Average Replicates Values (Bottom Dataset)|Check | GRNsight should average replicate values for bottom dataset, if expression data sheets are present in input workbook|
86
- |n9|NO | Sidebar Menu: Average Replicates Values (Bottom Dataset)|Uncheck | GRNsight should not average replicate values for bottom dataset, if expression data sheets are present in input workbook|
87
- |n10|NO | Dropdown Menu: Node -> Average Replicates Values (Bottom Dataset)|Check | GRNsight should average replicate values for bottom dataset, if expression data sheets are present in input workbook|
88
- |n10|NO | Dropdown Menu: Node -> Average Replicates Values (Bottom Dataset)|Uncheck | GRNsight should not average replicate values for bottom dataset, if expression data sheets are present in input workbook|
89
- |n11|NO | Sidebar Menu: Node Coloring Toggle Button|Click | Node coloring should toggle between on and off, with default being on, if expression data sheets are present in input workbook|
90
- |n12|YES | Dropdown Menu: Node -> Enable Node Coloring|Check | Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook|
91
- |n12|YES | Dropdown Menu: Node -> Enable Node Coloring|Uncheck | Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook|
92
- |s1|NO | Dropdown Menu: Species -> Current Species|Select a species | Opening gene information pages will use information of the selected species.|
93
- |s2|NO | Sidebar Menu: Species -> Current Species|Select a species from a dropdown list | Opening gene information pages will use information of the selected species.|
94
- |v1|NO | Sidebar Menu: Restrict Graph to Viewport Checkbox|Check | The graph bounding box should always be contained within the viewport.|
95
- |v1|NO | Sidebar Menu: Restrict Graph to Viewport Checkbox|Uncheck | The graph bounding box should be allowed to extend past the viewport|
96
- |v2|NO | Sidebar Menu: Viewport Size|Keep as Detected | Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.|
97
- |v2|NO | Sidebar Menu: Viewport Size|Select "Small" | The viewport size should be set to small|
98
- |v2|NO | Sidebar Menu: Viewport Size|Select "Medium" | The viewport size should be set to medium|
99
- |v2|NO | Sidebar Menu: Viewport Size|Select "Large" | The viewport size should be set to large|
100
- |v2|NO | Sidebar Menu: Viewport Size|Select "Fit to Window" | The viewport size should automatically be set to the size of the browser window|
101
- |v3|YES | Dropdown Menu: View -> Viewport Size|Keep as Detected | Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.|
102
- |v3|YES | Dropdown Menu: View -> Viewport Size|Check "Small" | The viewport size should be set to small|
103
- |v3|YES | Dropdown Menu: View -> Viewport Size|Check "Medium" | The viewport size should be set to medium|
104
- |v3|YES | Dropdown Menu: View -> Viewport Size|Check "Large" | The viewport size should be set to large|
105
- |v3|YES | Dropdown Menu: View -> Viewport Size|Check "Fit to Window" | The viewport size should automatically be set to the size of the browser window|
106
- |v4|YES | Dropdown Menu: View -> Restrict Graph to Viewport|Check | The graph should always be contained within the viewport.|
107
- |v4|YES | Dropdown Menu: View -> Restrict Graph to Viewport|Uncheck | The graph should be allowed to extend past the viewport|
108
- |v5|NO | Dropdown Menu: View -> Zoom|Enter Zoom Value, then Press Enter | The viewport should should zoom according to the value|
109
- |vp1|NO | Viewport Menu: D-Pad Control|Click Right Arrow | The graph should shift to the right|
110
- |vp1|NO | Viewport Menu: D-Pad Control|Click Left Arrow | The graph should shift to the left|
111
- |vp1|NO | Viewport Menu: D-Pad Control|Click Up Arrow | The graph should shift down|
112
- |vp1|NO | Viewport Menu: D-Pad Control|Click Down Arrow | The graph should shift up|
113
- |vp1|NO | Viewport Menu: D-Pad Control|Click Center Button | The graph should move to the center of the bounding box (note that it is not the same thing as the viewport|
114
- |vp2|NO | Viewport Menu: Zoom Slider|Increase Zoom Level | The graph should zoom in (get larger)|
115
- |vp2|NO | Viewport Menu: Zoom Slider|Decrease Zoom Level | The graph should zoom out (get smaller)|
116
- |vp3|NO | Viewport Menu: Node|No Click | |
117
- |vp3|NO | Viewport Menu: Node|Right Click | Gene information page should appear in a new tab within the browser.|
118
-
119
- ## GRNsight Function Availability Table
120
-
121
- | GRNsight Function | No Graph Loaded | Weighted Graph Loaded | Unweighted Graph Loaded |
122
- | ---------------- | --------------- | ----------------------- | ---------------------- |
123
- | Dropdown Menu: Edge -> Enable Edge Coloring Based on Weight Value - Check | YES | YES | YES |
124
- | Dropdown Menu: Edge -> Enable Edge Coloring Based on Weight Value - Uncheck | YES | YES | YES |
125
- | Sidebar Menu: Enable Edge Coloring - Check | YES | YES | YES |
126
- | Sidebar Menu: Enable Edge Coloring - Uncheck | YES | YES | YES |
127
- | Sidebar Menu: Hide/Show Edge Weights - Select "Show With Mouse Over" | NO | YES | NO |
128
- | Sidebar Menu: Hide/Show Edge Weights - Select "Always Show Edge Weights" | NO | YES | NO |
129
- | Sidebar Menu: Hide/Show Edge Weights - Select "Never Show Edge Weights" | NO | YES | NO |
130
- | Dropdown Menu: Edge -> Hide/Show Edge Weights - Check "Show With Mouse Over" | NO | YES | NO |
131
- | Dropdown Menu: Edge -> Hide/Show Edge Weights - Check "Always Show Edge Weights" | NO | YES | NO |
132
- | Dropdown Menu: Edge -> Hide/Show Edge Weights - Check "Never Show Edge Weights" | NO | YES | NO |
133
- | Sidebar Menu: Edge Weight Normalization Factor - Enter a Number in the Box and Click "Set Factor" button | NO | YES | NO |
134
- | Dropdown Menu: Edge -> Edge Weight Normalization Factor - Enter a Number in the Box and Press Enter | NO | YES | NO |
135
- | Sidebar Menu: Reset Factor Button - Click | NO | YES | NO |
136
- | Dropdown Menu: Edge -> Reset Edge Weight Normalization - Click | NO | YES | NO |
137
- | Sidebar Menu: Gray Threshold Slider - Change the Grey Threshold Value | NO | YES | NO |
138
- | Dropdown Menu: Edge -> Gray Threshold Input Box - Change the Grey Threshold Value and Press Enter | NO | YES | NO |
139
- | Sidebar Menu: Show Grey Edges as Dashed Checkbox - Uncheck | NO | YES | NO |
140
- | Sidebar Menu: Show Grey Edges as Dashed Checkbox - Check | NO | YES | NO |
141
- | Dropdown Menu: Edge -> Show Grey Edges as Dashed - Uncheck | NO | YES | NO |
142
- | Dropdown Menu: Edge -> Show Grey Edges as Dashed - Check | NO | YES | NO |
143
- | Dropdown Menu: Help - Select "Getting Started" | YES | YES | YES |
144
- | Dropdown Menu: Help - Select "GRNsight Wiki" | YES | YES | YES |
145
- | Dropdown Menu: Help - Select "About GRNsight" | YES | YES | YES |
146
- | Load Graph - None | YES | YES | YES |
147
- | Load Graph - Dropdown Menu: File -> Open File | YES | YES | YES |
148
- | Load Graph - Dropdown Menu: Demo -> Demo #1 | YES | YES | YES |
149
- | Load Graph - Dropdown Menu: Demo -> Demo #2 | YES | YES | YES |
150
- | Load Graph - Dropdown Menu: Demo -> Demo #3 | YES | YES | YES |
151
- | Load Graph - Dropdown Menu: Demo -> Demo #4 | YES | YES | YES |
152
- | Dropdown Menu: File -> Reload - Select | NO | YES | YES |
153
- | Dropdown Menu: File -> Export Data - Select "To Unweighted SIF" | NO | YES | YES |
154
- | Dropdown Menu: File -> Export Data - Select "To Weighted SIF" | NO | YES | YES |
155
- | Dropdown Menu: File -> Export Data - Select "To Unweighted GraphML" | NO | YES | YES |
156
- | Dropdown Menu: File -> Export Data - Select "To Weighted GraphML" | NO | YES | YES |
157
- | Dropdown Menu: File -> Export Data - Select "To Unweighted Excel" | NO | YES | YES |
158
- | Dropdown Menu: File -> Export Data - Select "To Weighted Excel" | NO | YES | YES |
159
- | Dropdown Menu: File -> Export Image - Select "To PNG" | NO | YES | YES |
160
- | Dropdown Menu: File -> Export Image - Select "To SVG" | NO | YES | YES |
161
- | Dropdown Menu: File -> Export Image - Select "To PDF" | NO | YES | YES |
162
- | Dropdown Menu: File -> Print - Select | NO | YES | YES |
163
- | Sidebar Menu: Grid Layout - Keep at Default | YES | YES | YES |
164
- | Sidebar Menu: Grid Layout - Click Grid Layout Button | YES | YES | YES |
165
- | Sidebar Menu: Grid Layout - Click Force Graph Layout Button | YES | YES | YES |
166
- | Dropdown Menu: Layout -> Graph Options - Keep at Default | NO | YES | YES |
167
- | Dropdown Menu: Layout -> Graph Options - Grid Layout | NO | YES | YES |
168
- | Dropdown Menu: Layout -> Graph Options - Force Graph | NO | YES | YES |
169
- | Dropdown Menu: Layout -> Lock Force Graph Parameters - Check "Lock Force Graph Parameters" | NO | YES | YES |
170
- | Dropdown Menu: Layout -> Lock Force Graph Parameters - Uncheck "Lock Force Graph Parameters" | NO | YES | YES |
171
- | Dropdown Menu: Layout -> Reset Force Graph Parameters - Click "Reset Force Graph Parameters" | YES | YES | YES |
172
- | Dropdown Menu: Layout -> Undo Reset - Click "Undo Reset" | YES | YES | YES |
173
- | Dropdown Menu: Layout -> Link Distance - Input Value, then Press Enter | YES | YES | YES |
174
- | Dropdown Menu: Layout -> Charge - Input Value, then Press Enter | YES | YES | YES |
175
- | Sidebar Menu: Force Graph Parameter Sliders - Keep at Default Values | YES | YES | YES |
176
- | Sidebar Menu: Force Graph Parameter Sliders - Decrease Link Distance | YES | YES | YES |
177
- | Sidebar Menu: Force Graph Parameter Sliders - Increase Link Distance | YES | YES | YES |
178
- | Sidebar Menu: Force Graph Parameter Sliders - Increase Charge | YES | YES | YES |
179
- | Sidebar Menu: Force Graph Parameter Sliders - Decrease Charge | YES | YES | YES |
180
- | Sidebar Menu: Lock Force Graph Parameters Checkbox - Check | YES | YES | YES |
181
- | Sidebar Menu: Lock Force Graph Parameters Checkbox - Uncheck | YES | YES | YES |
182
- | Sidebar Menu: Reset Force Graph Parameters Button - Click | YES | YES | YES |
183
- | Sidebar Menu: Undo Reset Button - Click | YES | YES | YES |
184
- | Sidebar Menu: Top Dataset - Keep Default Selection | NO | YES | YES |
185
- | Sidebar Menu: Top Dataset - Select Top Dataset from Dropdown List | NO | YES | YES |
186
- | Dropdown Menu: Node -> Select Top Dataset - Keep Default Selection | NO | YES | YES |
187
- | Dropdown Menu: Node -> Select Top Dataset - Check New Top Dataset from Dropdown List | NO | YES | YES |
188
- | Sidebar Menu: Bottom Dataset - Keep Default Selection | NO | YES | YES |
189
- | Sidebar Menu: Bottom Dataset - Select Bottom Dataset from Dropdown List | NO | YES | YES |
190
- | Dropdown Menu: Node -> Select Bottom Dataset - Keep Default Selection | NO | YES | YES |
191
- | Dropdown Menu: Node -> Select Bottom Dataset - Check New Bottom Dataset from Dropdown List | NO | YES | YES |
192
- | Sidebar Menu: Log Fold Change Max Value - Keep Default Value | NO | YES | YES |
193
- | Sidebar Menu: Log Fold Change Max Value - Increase Log Fold Change Max Value | NO | YES | YES |
194
- | Sidebar Menu: Log Fold Change Max Value - Decrease Log Fold Change Max Value | NO | YES | YES |
195
- | Dropdown Menu: Node -> Log Fold Change Max Value - Keep Default Value | NO | YES | YES |
196
- | Dropdown Menu: Node -> Log Fold Change Max Value - Increase Log Fold Change Max Value | NO | YES | YES |
197
- | Dropdown Menu: Node -> Log Fold Change Max Value - Decrease Log Fold Change Max Value | NO | YES | YES |
198
- | Sidebar Menu: Average Replicates Values (Top Dataset) - Check | NO | YES | YES |
199
- | Sidebar Menu: Average Replicates Values (Top Dataset) - Uncheck | NO | YES | YES |
200
- | Dropdown Menu: Node -> Average Replicates Values (Top Dataset) - Check | NO | YES | YES |
201
- | Dropdown Menu: Node -> Average Replicates Values (Top Dataset) - Uncheck | NO | YES | YES |
202
- | Sidebar Menu: Average Replicates Values (Bottom Dataset) - Check | NO | YES | YES |
203
- | Sidebar Menu: Average Replicates Values (Bottom Dataset) - Uncheck | NO | YES | YES |
204
- | Dropdown Menu: Node -> Average Replicates Values (Bottom Dataset) - Check | NO | YES | YES |
205
- | Dropdown Menu: Node -> Average Replicates Values (Bottom Dataset) - Uncheck | NO | YES | YES |
206
- | Sidebar Menu: Node Coloring Toggle Button - Click | NO | YES | YES |
207
- | Dropdown Menu: Node -> Enable Node Coloring - Check | NO | YES | YES |
208
- | Dropdown Menu: Node -> Enable Node Coloring - Uncheck | NO | YES | YES |
209
- | Dropdown Menu: Species -> Current Species - Select a species | YES | YES | YES |
210
- | Sidebar Menu: Species -> Current Species - Select a species from a dropdown list | YES | YES | YES |
211
- | Sidebar Menu: Restrict Graph to Viewport Checkbox - Check | YES | YES | YES |
212
- | Sidebar Menu: Restrict Graph to Viewport Checkbox - Uncheck | YES | YES | YES |
213
- | Sidebar Menu: Viewport Size - Keep as Detected | YES | YES | YES |
214
- | Sidebar Menu: Viewport Size - Select "Small" | YES | YES | YES |
215
- | Sidebar Menu: Viewport Size - Select "Medium" | YES | YES | YES |
216
- | Sidebar Menu: Viewport Size - Select "Large" | YES | YES | YES |
217
- | Sidebar Menu: Viewport Size - Select "Fit to Window" | YES | YES | YES |
218
- | Dropdown Menu: View -> Viewport Size - Keep as Detected | YES | YES | YES |
219
- | Dropdown Menu: View -> Viewport Size - Check "Small" | YES | YES | YES |
220
- | Dropdown Menu: View -> Viewport Size - Check "Medium" | YES | YES | YES |
221
- | Dropdown Menu: View -> Viewport Size - Check "Large" | YES | YES | YES |
222
- | Dropdown Menu: View -> Viewport Size - Check "Fit to Window" | YES | YES | YES |
223
- | Dropdown Menu: View -> Restrict Graph to Viewport - Check | YES | YES | YES |
224
- | Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck | YES | YES | YES |
225
- | Dropdown Menu: View -> Zoom - Enter Zoom Value, then Press Enter | NO | YES | YES |
226
- | Viewport Menu: D-Pad Control - Click Right Arrow | NO | YES | YES |
227
- | Viewport Menu: D-Pad Control - Click Left Arrow | NO | YES | YES |
228
- | Viewport Menu: D-Pad Control - Click Up Arrow | NO | YES | YES |
229
- | Viewport Menu: D-Pad Control - Click Down Arrow | NO | YES | YES |
230
- | Viewport Menu: D-Pad Control - Click Center Button | NO | YES | YES |
231
- | Viewport Menu: Zoom Slider - Increase Zoom Level | NO | YES | YES |
232
- | Viewport Menu: Zoom Slider - Decrease Zoom Level | NO | YES | YES |
233
- | Viewport Menu: Node - No Click | NO | YES | YES |
234
- | Viewport Menu: Node - Right Click | NO | YES | YES |
235
-
236
- ## Client Side Tests
237
- ### Test 1
238
- Instructions:
239
- - Sidebar Menu: Grid Layout - Keep at Default
240
- - Dropdown Menu: Node -> Enable Node Coloring - Check
241
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
242
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
243
-
244
- Results:
245
- - The graph should default to force graph layout
246
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
247
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
248
- - The graph should always be contained within the viewport.
249
-
250
- ### Test 2
251
- Instructions:
252
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
253
- - Dropdown Menu: Node -> Enable Node Coloring - Check
254
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
255
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
256
-
257
- Results:
258
- - The graph should change to grid layout
259
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
260
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
261
- - The graph should always be contained within the viewport.
262
-
263
- ### Test 3
264
- Instructions:
265
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
266
- - Dropdown Menu: Node -> Enable Node Coloring - Check
267
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
268
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
269
-
270
- Results:
271
- - The graph should change to force graph layout
272
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
273
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
274
- - The graph should always be contained within the viewport.
275
-
276
- ### Test 4
277
- Instructions:
278
- - Sidebar Menu: Grid Layout - Keep at Default
279
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
280
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
281
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
282
-
283
- Results:
284
- - The graph should default to force graph layout
285
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
286
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
287
- - The graph should always be contained within the viewport.
288
-
289
- ### Test 5
290
- Instructions:
291
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
292
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
293
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
294
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
295
-
296
- Results:
297
- - The graph should change to grid layout
298
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
299
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
300
- - The graph should always be contained within the viewport.
301
-
302
- ### Test 6
303
- Instructions:
304
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
305
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
306
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
307
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
308
-
309
- Results:
310
- - The graph should change to force graph layout
311
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
312
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
313
- - The graph should always be contained within the viewport.
314
-
315
- ### Test 7
316
- Instructions:
317
- - Sidebar Menu: Grid Layout - Keep at Default
318
- - Dropdown Menu: Node -> Enable Node Coloring - Check
319
- - Dropdown Menu: View -> Viewport Size - Check "Small"
320
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
321
-
322
- Results:
323
- - The graph should default to force graph layout
324
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
325
- - The viewport size should be set to small
326
- - The graph should always be contained within the viewport.
327
-
328
- ### Test 8
329
- Instructions:
330
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
331
- - Dropdown Menu: Node -> Enable Node Coloring - Check
332
- - Dropdown Menu: View -> Viewport Size - Check "Small"
333
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
334
-
335
- Results:
336
- - The graph should change to grid layout
337
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
338
- - The viewport size should be set to small
339
- - The graph should always be contained within the viewport.
340
-
341
- ### Test 9
342
- Instructions:
343
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
344
- - Dropdown Menu: Node -> Enable Node Coloring - Check
345
- - Dropdown Menu: View -> Viewport Size - Check "Small"
346
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
347
-
348
- Results:
349
- - The graph should change to force graph layout
350
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
351
- - The viewport size should be set to small
352
- - The graph should always be contained within the viewport.
353
-
354
- ### Test 10
355
- Instructions:
356
- - Sidebar Menu: Grid Layout - Keep at Default
357
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
358
- - Dropdown Menu: View -> Viewport Size - Check "Small"
359
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
360
-
361
- Results:
362
- - The graph should default to force graph layout
363
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
364
- - The viewport size should be set to small
365
- - The graph should always be contained within the viewport.
366
-
367
- ### Test 11
368
- Instructions:
369
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
370
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
371
- - Dropdown Menu: View -> Viewport Size - Check "Small"
372
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
373
-
374
- Results:
375
- - The graph should change to grid layout
376
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
377
- - The viewport size should be set to small
378
- - The graph should always be contained within the viewport.
379
-
380
- ### Test 12
381
- Instructions:
382
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
383
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
384
- - Dropdown Menu: View -> Viewport Size - Check "Small"
385
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
386
-
387
- Results:
388
- - The graph should change to force graph layout
389
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
390
- - The viewport size should be set to small
391
- - The graph should always be contained within the viewport.
392
-
393
- ### Test 13
394
- Instructions:
395
- - Sidebar Menu: Grid Layout - Keep at Default
396
- - Dropdown Menu: Node -> Enable Node Coloring - Check
397
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
398
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
399
-
400
- Results:
401
- - The graph should default to force graph layout
402
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
403
- - The viewport size should be set to medium
404
- - The graph should always be contained within the viewport.
405
-
406
- ### Test 14
407
- Instructions:
408
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
409
- - Dropdown Menu: Node -> Enable Node Coloring - Check
410
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
411
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
412
-
413
- Results:
414
- - The graph should change to grid layout
415
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
416
- - The viewport size should be set to medium
417
- - The graph should always be contained within the viewport.
418
-
419
- ### Test 15
420
- Instructions:
421
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
422
- - Dropdown Menu: Node -> Enable Node Coloring - Check
423
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
424
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
425
-
426
- Results:
427
- - The graph should change to force graph layout
428
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
429
- - The viewport size should be set to medium
430
- - The graph should always be contained within the viewport.
431
-
432
- ### Test 16
433
- Instructions:
434
- - Sidebar Menu: Grid Layout - Keep at Default
435
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
436
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
437
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
438
-
439
- Results:
440
- - The graph should default to force graph layout
441
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
442
- - The viewport size should be set to medium
443
- - The graph should always be contained within the viewport.
444
-
445
- ### Test 17
446
- Instructions:
447
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
448
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
449
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
450
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
451
-
452
- Results:
453
- - The graph should change to grid layout
454
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
455
- - The viewport size should be set to medium
456
- - The graph should always be contained within the viewport.
457
-
458
- ### Test 18
459
- Instructions:
460
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
461
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
462
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
463
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
464
-
465
- Results:
466
- - The graph should change to force graph layout
467
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
468
- - The viewport size should be set to medium
469
- - The graph should always be contained within the viewport.
470
-
471
- ### Test 19
472
- Instructions:
473
- - Sidebar Menu: Grid Layout - Keep at Default
474
- - Dropdown Menu: Node -> Enable Node Coloring - Check
475
- - Dropdown Menu: View -> Viewport Size - Check "Large"
476
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
477
-
478
- Results:
479
- - The graph should default to force graph layout
480
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
481
- - The viewport size should be set to large
482
- - The graph should always be contained within the viewport.
483
-
484
- ### Test 20
485
- Instructions:
486
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
487
- - Dropdown Menu: Node -> Enable Node Coloring - Check
488
- - Dropdown Menu: View -> Viewport Size - Check "Large"
489
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
490
-
491
- Results:
492
- - The graph should change to grid layout
493
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
494
- - The viewport size should be set to large
495
- - The graph should always be contained within the viewport.
496
-
497
- ### Test 21
498
- Instructions:
499
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
500
- - Dropdown Menu: Node -> Enable Node Coloring - Check
501
- - Dropdown Menu: View -> Viewport Size - Check "Large"
502
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
503
-
504
- Results:
505
- - The graph should change to force graph layout
506
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
507
- - The viewport size should be set to large
508
- - The graph should always be contained within the viewport.
509
-
510
- ### Test 22
511
- Instructions:
512
- - Sidebar Menu: Grid Layout - Keep at Default
513
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
514
- - Dropdown Menu: View -> Viewport Size - Check "Large"
515
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
516
-
517
- Results:
518
- - The graph should default to force graph layout
519
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
520
- - The viewport size should be set to large
521
- - The graph should always be contained within the viewport.
522
-
523
- ### Test 23
524
- Instructions:
525
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
526
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
527
- - Dropdown Menu: View -> Viewport Size - Check "Large"
528
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
529
-
530
- Results:
531
- - The graph should change to grid layout
532
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
533
- - The viewport size should be set to large
534
- - The graph should always be contained within the viewport.
535
-
536
- ### Test 24
537
- Instructions:
538
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
539
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
540
- - Dropdown Menu: View -> Viewport Size - Check "Large"
541
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
542
-
543
- Results:
544
- - The graph should change to force graph layout
545
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
546
- - The viewport size should be set to large
547
- - The graph should always be contained within the viewport.
548
-
549
- ### Test 25
550
- Instructions:
551
- - Sidebar Menu: Grid Layout - Keep at Default
552
- - Dropdown Menu: Node -> Enable Node Coloring - Check
553
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
554
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
555
-
556
- Results:
557
- - The graph should default to force graph layout
558
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
559
- - The viewport size should automatically be set to the size of the browser window
560
- - The graph should always be contained within the viewport.
561
-
562
- ### Test 26
563
- Instructions:
564
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
565
- - Dropdown Menu: Node -> Enable Node Coloring - Check
566
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
567
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
568
-
569
- Results:
570
- - The graph should change to grid layout
571
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
572
- - The viewport size should automatically be set to the size of the browser window
573
- - The graph should always be contained within the viewport.
574
-
575
- ### Test 27
576
- Instructions:
577
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
578
- - Dropdown Menu: Node -> Enable Node Coloring - Check
579
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
580
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
581
-
582
- Results:
583
- - The graph should change to force graph layout
584
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
585
- - The viewport size should automatically be set to the size of the browser window
586
- - The graph should always be contained within the viewport.
587
-
588
- ### Test 28
589
- Instructions:
590
- - Sidebar Menu: Grid Layout - Keep at Default
591
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
592
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
593
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
594
-
595
- Results:
596
- - The graph should default to force graph layout
597
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
598
- - The viewport size should automatically be set to the size of the browser window
599
- - The graph should always be contained within the viewport.
600
-
601
- ### Test 29
602
- Instructions:
603
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
604
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
605
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
606
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
607
-
608
- Results:
609
- - The graph should change to grid layout
610
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
611
- - The viewport size should automatically be set to the size of the browser window
612
- - The graph should always be contained within the viewport.
613
-
614
- ### Test 30
615
- Instructions:
616
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
617
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
618
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
619
- - Dropdown Menu: View -> Restrict Graph to Viewport - Check
620
-
621
- Results:
622
- - The graph should change to force graph layout
623
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
624
- - The viewport size should automatically be set to the size of the browser window
625
- - The graph should always be contained within the viewport.
626
-
627
- ### Test 31
628
- Instructions:
629
- - Sidebar Menu: Grid Layout - Keep at Default
630
- - Dropdown Menu: Node -> Enable Node Coloring - Check
631
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
632
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
633
-
634
- Results:
635
- - The graph should default to force graph layout
636
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
637
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
638
- - The graph should be allowed to extend past the viewport
639
-
640
- ### Test 32
641
- Instructions:
642
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
643
- - Dropdown Menu: Node -> Enable Node Coloring - Check
644
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
645
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
646
-
647
- Results:
648
- - The graph should change to grid layout
649
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
650
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
651
- - The graph should be allowed to extend past the viewport
652
-
653
- ### Test 33
654
- Instructions:
655
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
656
- - Dropdown Menu: Node -> Enable Node Coloring - Check
657
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
658
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
659
-
660
- Results:
661
- - The graph should change to force graph layout
662
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
663
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
664
- - The graph should be allowed to extend past the viewport
665
-
666
- ### Test 34
667
- Instructions:
668
- - Sidebar Menu: Grid Layout - Keep at Default
669
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
670
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
671
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
672
-
673
- Results:
674
- - The graph should default to force graph layout
675
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
676
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
677
- - The graph should be allowed to extend past the viewport
678
-
679
- ### Test 35
680
- Instructions:
681
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
682
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
683
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
684
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
685
-
686
- Results:
687
- - The graph should change to grid layout
688
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
689
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
690
- - The graph should be allowed to extend past the viewport
691
-
692
- ### Test 36
693
- Instructions:
694
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
695
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
696
- - Dropdown Menu: View -> Viewport Size - Keep as Detected
697
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
698
-
699
- Results:
700
- - The graph should change to force graph layout
701
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
702
- - Upon loading or reloading the GRNsight webpage, the viewport size should be automatically detected and set to small, medium, or large, based on the size of the browser window.
703
- - The graph should be allowed to extend past the viewport
704
-
705
- ### Test 37
706
- Instructions:
707
- - Sidebar Menu: Grid Layout - Keep at Default
708
- - Dropdown Menu: Node -> Enable Node Coloring - Check
709
- - Dropdown Menu: View -> Viewport Size - Check "Small"
710
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
711
-
712
- Results:
713
- - The graph should default to force graph layout
714
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
715
- - The viewport size should be set to small
716
- - The graph should be allowed to extend past the viewport
717
-
718
- ### Test 38
719
- Instructions:
720
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
721
- - Dropdown Menu: Node -> Enable Node Coloring - Check
722
- - Dropdown Menu: View -> Viewport Size - Check "Small"
723
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
724
-
725
- Results:
726
- - The graph should change to grid layout
727
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
728
- - The viewport size should be set to small
729
- - The graph should be allowed to extend past the viewport
730
-
731
- ### Test 39
732
- Instructions:
733
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
734
- - Dropdown Menu: Node -> Enable Node Coloring - Check
735
- - Dropdown Menu: View -> Viewport Size - Check "Small"
736
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
737
-
738
- Results:
739
- - The graph should change to force graph layout
740
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
741
- - The viewport size should be set to small
742
- - The graph should be allowed to extend past the viewport
743
-
744
- ### Test 40
745
- Instructions:
746
- - Sidebar Menu: Grid Layout - Keep at Default
747
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
748
- - Dropdown Menu: View -> Viewport Size - Check "Small"
749
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
750
-
751
- Results:
752
- - The graph should default to force graph layout
753
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
754
- - The viewport size should be set to small
755
- - The graph should be allowed to extend past the viewport
756
-
757
- ### Test 41
758
- Instructions:
759
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
760
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
761
- - Dropdown Menu: View -> Viewport Size - Check "Small"
762
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
763
-
764
- Results:
765
- - The graph should change to grid layout
766
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
767
- - The viewport size should be set to small
768
- - The graph should be allowed to extend past the viewport
769
-
770
- ### Test 42
771
- Instructions:
772
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
773
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
774
- - Dropdown Menu: View -> Viewport Size - Check "Small"
775
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
776
-
777
- Results:
778
- - The graph should change to force graph layout
779
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
780
- - The viewport size should be set to small
781
- - The graph should be allowed to extend past the viewport
782
-
783
- ### Test 43
784
- Instructions:
785
- - Sidebar Menu: Grid Layout - Keep at Default
786
- - Dropdown Menu: Node -> Enable Node Coloring - Check
787
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
788
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
789
-
790
- Results:
791
- - The graph should default to force graph layout
792
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
793
- - The viewport size should be set to medium
794
- - The graph should be allowed to extend past the viewport
795
-
796
- ### Test 44
797
- Instructions:
798
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
799
- - Dropdown Menu: Node -> Enable Node Coloring - Check
800
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
801
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
802
-
803
- Results:
804
- - The graph should change to grid layout
805
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
806
- - The viewport size should be set to medium
807
- - The graph should be allowed to extend past the viewport
808
-
809
- ### Test 45
810
- Instructions:
811
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
812
- - Dropdown Menu: Node -> Enable Node Coloring - Check
813
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
814
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
815
-
816
- Results:
817
- - The graph should change to force graph layout
818
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
819
- - The viewport size should be set to medium
820
- - The graph should be allowed to extend past the viewport
821
-
822
- ### Test 46
823
- Instructions:
824
- - Sidebar Menu: Grid Layout - Keep at Default
825
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
826
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
827
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
828
-
829
- Results:
830
- - The graph should default to force graph layout
831
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
832
- - The viewport size should be set to medium
833
- - The graph should be allowed to extend past the viewport
834
-
835
- ### Test 47
836
- Instructions:
837
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
838
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
839
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
840
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
841
-
842
- Results:
843
- - The graph should change to grid layout
844
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
845
- - The viewport size should be set to medium
846
- - The graph should be allowed to extend past the viewport
847
-
848
- ### Test 48
849
- Instructions:
850
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
851
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
852
- - Dropdown Menu: View -> Viewport Size - Check "Medium"
853
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
854
-
855
- Results:
856
- - The graph should change to force graph layout
857
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
858
- - The viewport size should be set to medium
859
- - The graph should be allowed to extend past the viewport
860
-
861
- ### Test 49
862
- Instructions:
863
- - Sidebar Menu: Grid Layout - Keep at Default
864
- - Dropdown Menu: Node -> Enable Node Coloring - Check
865
- - Dropdown Menu: View -> Viewport Size - Check "Large"
866
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
867
-
868
- Results:
869
- - The graph should default to force graph layout
870
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
871
- - The viewport size should be set to large
872
- - The graph should be allowed to extend past the viewport
873
-
874
- ### Test 50
875
- Instructions:
876
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
877
- - Dropdown Menu: Node -> Enable Node Coloring - Check
878
- - Dropdown Menu: View -> Viewport Size - Check "Large"
879
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
880
-
881
- Results:
882
- - The graph should change to grid layout
883
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
884
- - The viewport size should be set to large
885
- - The graph should be allowed to extend past the viewport
886
-
887
- ### Test 51
888
- Instructions:
889
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
890
- - Dropdown Menu: Node -> Enable Node Coloring - Check
891
- - Dropdown Menu: View -> Viewport Size - Check "Large"
892
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
893
-
894
- Results:
895
- - The graph should change to force graph layout
896
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
897
- - The viewport size should be set to large
898
- - The graph should be allowed to extend past the viewport
899
-
900
- ### Test 52
901
- Instructions:
902
- - Sidebar Menu: Grid Layout - Keep at Default
903
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
904
- - Dropdown Menu: View -> Viewport Size - Check "Large"
905
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
906
-
907
- Results:
908
- - The graph should default to force graph layout
909
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
910
- - The viewport size should be set to large
911
- - The graph should be allowed to extend past the viewport
912
-
913
- ### Test 53
914
- Instructions:
915
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
916
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
917
- - Dropdown Menu: View -> Viewport Size - Check "Large"
918
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
919
-
920
- Results:
921
- - The graph should change to grid layout
922
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
923
- - The viewport size should be set to large
924
- - The graph should be allowed to extend past the viewport
925
-
926
- ### Test 54
927
- Instructions:
928
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
929
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
930
- - Dropdown Menu: View -> Viewport Size - Check "Large"
931
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
932
-
933
- Results:
934
- - The graph should change to force graph layout
935
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
936
- - The viewport size should be set to large
937
- - The graph should be allowed to extend past the viewport
938
-
939
- ### Test 55
940
- Instructions:
941
- - Sidebar Menu: Grid Layout - Keep at Default
942
- - Dropdown Menu: Node -> Enable Node Coloring - Check
943
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
944
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
945
-
946
- Results:
947
- - The graph should default to force graph layout
948
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
949
- - The viewport size should automatically be set to the size of the browser window
950
- - The graph should be allowed to extend past the viewport
951
-
952
- ### Test 56
953
- Instructions:
954
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
955
- - Dropdown Menu: Node -> Enable Node Coloring - Check
956
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
957
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
958
-
959
- Results:
960
- - The graph should change to grid layout
961
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
962
- - The viewport size should automatically be set to the size of the browser window
963
- - The graph should be allowed to extend past the viewport
964
-
965
- ### Test 57
966
- Instructions:
967
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
968
- - Dropdown Menu: Node -> Enable Node Coloring - Check
969
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
970
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
971
-
972
- Results:
973
- - The graph should change to force graph layout
974
- - Node coloring should become enabled, and Node Coloring Toggle Button text in sidebar menu should toggle on, if expression data sheets are present in input workbook
975
- - The viewport size should automatically be set to the size of the browser window
976
- - The graph should be allowed to extend past the viewport
977
-
978
- ### Test 58
979
- Instructions:
980
- - Sidebar Menu: Grid Layout - Keep at Default
981
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
982
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
983
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
984
-
985
- Results:
986
- - The graph should default to force graph layout
987
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
988
- - The viewport size should automatically be set to the size of the browser window
989
- - The graph should be allowed to extend past the viewport
990
-
991
- ### Test 59
992
- Instructions:
993
- - Sidebar Menu: Grid Layout - Click Grid Layout Button
994
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
995
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
996
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
997
-
998
- Results:
999
- - The graph should change to grid layout
1000
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
1001
- - The viewport size should automatically be set to the size of the browser window
1002
- - The graph should be allowed to extend past the viewport
1003
-
1004
- ### Test 60
1005
- Instructions:
1006
- - Sidebar Menu: Grid Layout - Click Force Graph Layout Button
1007
- - Dropdown Menu: Node -> Enable Node Coloring - Uncheck
1008
- - Dropdown Menu: View -> Viewport Size - Check "Fit to Window"
1009
- - Dropdown Menu: View -> Restrict Graph to Viewport - Uncheck
1010
-
1011
- Results:
1012
- - The graph should change to force graph layout
1013
- - Node coloring should become disabled, and Node Coloring Toggle Button text in sidebar menu should toggle off, if expression data sheets are present in input workbook
1014
- - The viewport size should automatically be set to the size of the browser window
1015
- - The graph should be allowed to extend past the viewport
1016
-