graphbox 1.2.1 → 1.3.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +98 -41
- package/dist/__tests__/integration/bipartite.integration.test.d.ts +9 -0
- package/dist/__tests__/integration/bipartite.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/chordal.integration.test.d.ts +9 -0
- package/dist/__tests__/integration/chordal.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/cliquewidth.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/cliquewidth.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/cograph.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/cograph.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/comparability.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/comparability.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/eulerian.integration.test.d.ts +9 -0
- package/dist/__tests__/integration/eulerian.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/hamiltonian.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/hamiltonian.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/helpers.d.ts +8 -0
- package/dist/__tests__/integration/helpers.d.ts.map +1 -0
- package/dist/__tests__/integration/interval.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/interval.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/modular.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/modular.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/pathwidth.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/pathwidth.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/perfect.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/perfect.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/permutation.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/permutation.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/planar.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/planar.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/ptolemaic.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/ptolemaic.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/quasiline.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/quasiline.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/regular.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/regular.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/split.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/split.integration.test.d.ts.map +1 -0
- package/dist/__tests__/integration/tree.integration.test.d.ts +8 -0
- package/dist/__tests__/integration/tree.integration.test.d.ts.map +1 -0
- package/dist/algorithms/analysis/connected-components.unit.test.d.ts +5 -0
- package/dist/algorithms/analysis/connected-components.unit.test.d.ts.map +1 -0
- package/dist/algorithms/analysis/cycle-detection.unit.test.d.ts +5 -0
- package/dist/algorithms/analysis/cycle-detection.unit.test.d.ts.map +1 -0
- package/dist/algorithms/analysis/scc.unit.test.d.ts +5 -0
- package/dist/algorithms/analysis/scc.unit.test.d.ts.map +1 -0
- package/dist/algorithms/analysis/topological-sort.unit.test.d.ts +5 -0
- package/dist/algorithms/analysis/topological-sort.unit.test.d.ts.map +1 -0
- package/dist/algorithms/clustering/infomap.unit.test.d.ts +5 -0
- package/dist/algorithms/clustering/infomap.unit.test.d.ts.map +1 -0
- package/dist/algorithms/clustering/label-propagation.unit.test.d.ts +5 -0
- package/dist/algorithms/clustering/label-propagation.unit.test.d.ts.map +1 -0
- package/dist/algorithms/clustering/leiden.unit.test.d.ts +5 -0
- package/dist/algorithms/clustering/leiden.unit.test.d.ts.map +1 -0
- package/dist/algorithms/clustering/louvain.d.ts +22 -6
- package/dist/algorithms/clustering/louvain.d.ts.map +1 -1
- package/dist/algorithms/clustering/louvain.unit.test.d.ts +5 -0
- package/dist/algorithms/clustering/louvain.unit.test.d.ts.map +1 -0
- package/dist/algorithms/decomposition/biconnected.unit.test.d.ts +2 -0
- package/dist/algorithms/decomposition/biconnected.unit.test.d.ts.map +1 -0
- package/dist/algorithms/decomposition/core-periphery.unit.test.d.ts +2 -0
- package/dist/algorithms/decomposition/core-periphery.unit.test.d.ts.map +1 -0
- package/dist/algorithms/decomposition/k-core.unit.test.d.ts +2 -0
- package/dist/algorithms/decomposition/k-core.unit.test.d.ts.map +1 -0
- package/dist/algorithms/extraction/filter.unit.test.d.ts +5 -0
- package/dist/algorithms/extraction/filter.unit.test.d.ts.map +1 -0
- package/dist/algorithms/extraction/forbidden-subgraphs.d.ts +211 -0
- package/dist/algorithms/extraction/forbidden-subgraphs.d.ts.map +1 -0
- package/dist/algorithms/extraction/motif.unit.test.d.ts +5 -0
- package/dist/algorithms/extraction/motif.unit.test.d.ts.map +1 -0
- package/dist/algorithms/extraction/path.unit.test.d.ts +5 -0
- package/dist/algorithms/extraction/path.unit.test.d.ts.map +1 -0
- package/dist/algorithms/extraction/subgraph.unit.test.d.ts +5 -0
- package/dist/algorithms/extraction/subgraph.unit.test.d.ts.map +1 -0
- package/dist/algorithms/extraction/truss.unit.test.d.ts +5 -0
- package/dist/algorithms/extraction/truss.unit.test.d.ts.map +1 -0
- package/dist/algorithms/extraction/validators.unit.test.d.ts +2 -0
- package/dist/algorithms/extraction/validators.unit.test.d.ts.map +1 -0
- package/dist/algorithms/graph/graph-adapter.d.ts.map +1 -1
- package/dist/algorithms/graph/graph-adapter.unit.test.d.ts +2 -0
- package/dist/algorithms/graph/graph-adapter.unit.test.d.ts.map +1 -0
- package/dist/algorithms/graph/graph.unit.test.d.ts +5 -0
- package/dist/algorithms/graph/graph.unit.test.d.ts.map +1 -0
- package/dist/algorithms/hierarchical/clustering.unit.test.d.ts +2 -0
- package/dist/algorithms/hierarchical/clustering.unit.test.d.ts.map +1 -0
- package/dist/algorithms/layout/hierarchical-layout.unit.test.d.ts +5 -0
- package/dist/algorithms/layout/hierarchical-layout.unit.test.d.ts.map +1 -0
- package/dist/algorithms/metrics/cluster-quality.unit.test.d.ts +5 -0
- package/dist/algorithms/metrics/cluster-quality.unit.test.d.ts.map +1 -0
- package/dist/algorithms/metrics/conductance.unit.test.d.ts +5 -0
- package/dist/algorithms/metrics/conductance.unit.test.d.ts.map +1 -0
- package/dist/algorithms/metrics/modularity.d.ts.map +1 -1
- package/dist/algorithms/metrics/modularity.unit.test.d.ts +5 -0
- package/dist/algorithms/metrics/modularity.unit.test.d.ts.map +1 -0
- package/dist/algorithms/partitioning/spectral.unit.test.d.ts +5 -0
- package/dist/algorithms/partitioning/spectral.unit.test.d.ts.map +1 -0
- package/dist/algorithms/pathfinding/dijkstra.unit.test.d.ts +5 -0
- package/dist/algorithms/pathfinding/dijkstra.unit.test.d.ts.map +1 -0
- package/dist/algorithms/pathfinding/mutual-information.unit.test.d.ts +2 -0
- package/dist/algorithms/pathfinding/mutual-information.unit.test.d.ts.map +1 -0
- package/dist/algorithms/pathfinding/path-ranking.d.ts.map +1 -1
- package/dist/algorithms/pathfinding/path-ranking.unit.test.d.ts +2 -0
- package/dist/algorithms/pathfinding/path-ranking.unit.test.d.ts.map +1 -0
- package/dist/algorithms/pathfinding/priority-queue.unit.test.d.ts +5 -0
- package/dist/algorithms/pathfinding/priority-queue.unit.test.d.ts.map +1 -0
- package/dist/algorithms/pathfinding/random-path-sampling.d.ts +31 -0
- package/dist/algorithms/pathfinding/random-path-sampling.d.ts.map +1 -0
- package/dist/algorithms/pathfinding/shortest-path-ranking.d.ts +28 -0
- package/dist/algorithms/pathfinding/shortest-path-ranking.d.ts.map +1 -0
- package/dist/algorithms/traversal/bidirectional-bfs.d.ts +15 -0
- package/dist/algorithms/traversal/bidirectional-bfs.d.ts.map +1 -1
- package/dist/algorithms/traversal/degree-prioritised-expansion-intersection.unit.test.d.ts +13 -0
- package/dist/algorithms/traversal/degree-prioritised-expansion-intersection.unit.test.d.ts.map +1 -0
- package/dist/algorithms/traversal/degree-prioritised-expansion.d.ts +34 -2
- package/dist/algorithms/traversal/degree-prioritised-expansion.d.ts.map +1 -1
- package/dist/algorithms/traversal/degree-prioritised-expansion.unit.test.d.ts +5 -0
- package/dist/algorithms/traversal/degree-prioritised-expansion.unit.test.d.ts.map +1 -0
- package/dist/algorithms/traversal/entropy-guided-expansion.d.ts +172 -0
- package/dist/algorithms/traversal/entropy-guided-expansion.d.ts.map +1 -0
- package/dist/algorithms/traversal/entropy-guided-expansion.unit.test.d.ts +2 -0
- package/dist/algorithms/traversal/entropy-guided-expansion.unit.test.d.ts.map +1 -0
- package/dist/algorithms/traversal/heterogeneity-aware-expansion.d.ts +199 -0
- package/dist/algorithms/traversal/heterogeneity-aware-expansion.d.ts.map +1 -0
- package/dist/algorithms/traversal/heterogeneity-aware-expansion.unit.test.d.ts +2 -0
- package/dist/algorithms/traversal/heterogeneity-aware-expansion.unit.test.d.ts.map +1 -0
- package/dist/algorithms/traversal/index.d.ts +14 -0
- package/dist/algorithms/traversal/index.d.ts.map +1 -1
- package/dist/algorithms/traversal/intelligent-delayed-termination.d.ts +221 -0
- package/dist/algorithms/traversal/intelligent-delayed-termination.d.ts.map +1 -0
- package/dist/algorithms/traversal/intelligent-delayed-termination.unit.test.d.ts +2 -0
- package/dist/algorithms/traversal/intelligent-delayed-termination.unit.test.d.ts.map +1 -0
- package/dist/algorithms/traversal/multi-frontier-adaptive-expansion.d.ts +245 -0
- package/dist/algorithms/traversal/multi-frontier-adaptive-expansion.d.ts.map +1 -0
- package/dist/algorithms/traversal/multi-frontier-adaptive-expansion.unit.test.d.ts +2 -0
- package/dist/algorithms/traversal/multi-frontier-adaptive-expansion.unit.test.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/frontier-state.d.ts +25 -0
- package/dist/algorithms/traversal/overlap-based/frontier-state.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/index.d.ts +71 -0
- package/dist/algorithms/traversal/overlap-based/index.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/overlap-based-expansion.d.ts +182 -0
- package/dist/algorithms/traversal/overlap-based/overlap-based-expansion.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/overlap-result.d.ts +82 -0
- package/dist/algorithms/traversal/overlap-based/overlap-result.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/between-graph/between-graph-strategy.d.ts +42 -0
- package/dist/algorithms/traversal/overlap-based/strategies/between-graph/between-graph-strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/between-graph/minimal-paths.strategy.d.ts +41 -0
- package/dist/algorithms/traversal/overlap-based/strategies/between-graph/minimal-paths.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/between-graph/salience-preserving.strategy.d.ts +82 -0
- package/dist/algorithms/traversal/overlap-based/strategies/between-graph/salience-preserving.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/between-graph/truncated-component.strategy.d.ts +59 -0
- package/dist/algorithms/traversal/overlap-based/strategies/between-graph/truncated-component.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/n1-handling/coverage-threshold.strategy.d.ts +57 -0
- package/dist/algorithms/traversal/overlap-based/strategies/n1-handling/coverage-threshold.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/n1-handling/n1-handling-strategy.d.ts +25 -0
- package/dist/algorithms/traversal/overlap-based/strategies/n1-handling/n1-handling-strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/overlap-detection/overlap-detection-strategy.d.ts +26 -0
- package/dist/algorithms/traversal/overlap-based/strategies/overlap-detection/overlap-detection-strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/overlap-detection/physical-meeting.strategy.d.ts +35 -0
- package/dist/algorithms/traversal/overlap-based/strategies/overlap-detection/physical-meeting.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/overlap-detection/sphere-intersection.strategy.d.ts +69 -0
- package/dist/algorithms/traversal/overlap-based/strategies/overlap-detection/sphere-intersection.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/overlap-detection/threshold-sharing.strategy.d.ts +72 -0
- package/dist/algorithms/traversal/overlap-based/strategies/overlap-detection/threshold-sharing.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/termination/common-convergence.strategy.d.ts +45 -0
- package/dist/algorithms/traversal/overlap-based/strategies/termination/common-convergence.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/termination/full-pairwise.strategy.d.ts +43 -0
- package/dist/algorithms/traversal/overlap-based/strategies/termination/full-pairwise.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/termination/termination-strategy.d.ts +40 -0
- package/dist/algorithms/traversal/overlap-based/strategies/termination/termination-strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/overlap-based/strategies/termination/transitive-connectivity.strategy.d.ts +45 -0
- package/dist/algorithms/traversal/overlap-based/strategies/termination/transitive-connectivity.strategy.d.ts.map +1 -0
- package/dist/algorithms/traversal/path-preserving-expansion.d.ts +197 -0
- package/dist/algorithms/traversal/path-preserving-expansion.d.ts.map +1 -0
- package/dist/algorithms/traversal/priority-calculator.d.ts +135 -0
- package/dist/algorithms/traversal/priority-calculator.d.ts.map +1 -0
- package/dist/algorithms/traversal/priority-queue.d.ts +6 -0
- package/dist/algorithms/traversal/priority-queue.d.ts.map +1 -1
- package/dist/algorithms/traversal/retrospective-salience-expansion.d.ts +173 -0
- package/dist/algorithms/traversal/retrospective-salience-expansion.d.ts.map +1 -0
- package/dist/algorithms/traversal/retrospective-salience-expansion.unit.test.d.ts +5 -0
- package/dist/algorithms/traversal/retrospective-salience-expansion.unit.test.d.ts.map +1 -0
- package/dist/algorithms/traversal/salience-prioritised-expansion.d.ts +149 -0
- package/dist/algorithms/traversal/salience-prioritised-expansion.d.ts.map +1 -0
- package/dist/algorithms/types/clustering-types.d.ts +2 -2
- package/dist/algorithms/types/clustering-types.d.ts.map +1 -1
- package/dist/algorithms/utils/csr.d.ts.map +1 -1
- package/dist/algorithms/utils/csr.unit.test.d.ts +2 -0
- package/dist/algorithms/utils/csr.unit.test.d.ts.map +1 -0
- package/dist/algorithms/utils/type-guards.unit.test.d.ts +2 -0
- package/dist/algorithms/utils/type-guards.unit.test.d.ts.map +1 -0
- package/dist/algorithms/utils/validators.unit.test.d.ts +2 -0
- package/dist/algorithms/utils/validators.unit.test.d.ts.map +1 -0
- package/dist/analyzer/advanced-props.d.ts.map +1 -1
- package/dist/analyzer/advanced-props.unit.test.d.ts +5 -0
- package/dist/analyzer/advanced-props.unit.test.d.ts.map +1 -0
- package/dist/analyzer/advanced-structures.unit.test.d.ts +5 -0
- package/dist/analyzer/advanced-structures.unit.test.d.ts.map +1 -0
- package/dist/analyzer/connectivity.unit.test.d.ts +5 -0
- package/dist/analyzer/connectivity.unit.test.d.ts.map +1 -0
- package/dist/analyzer/core-props.unit.test.d.ts +5 -0
- package/dist/analyzer/core-props.unit.test.d.ts.map +1 -0
- package/dist/analyzer/forbidden-subgraph.d.ts +59 -0
- package/dist/analyzer/forbidden-subgraph.d.ts.map +1 -0
- package/dist/analyzer/geometric.d.ts +21 -0
- package/dist/analyzer/geometric.d.ts.map +1 -0
- package/dist/analyzer/geometric.unit.test.d.ts +5 -0
- package/dist/analyzer/geometric.unit.test.d.ts.map +1 -0
- package/dist/analyzer/helpers.d.ts +2 -0
- package/dist/analyzer/helpers.d.ts.map +1 -1
- package/dist/analyzer/helpers.unit.test.d.ts +9 -0
- package/dist/analyzer/helpers.unit.test.d.ts.map +1 -0
- package/dist/analyzer/intersection.d.ts +17 -0
- package/dist/analyzer/intersection.d.ts.map +1 -0
- package/dist/analyzer/main.d.ts +22 -0
- package/dist/analyzer/main.d.ts.map +1 -1
- package/dist/analyzer/main.unit.test.d.ts +5 -0
- package/dist/analyzer/main.unit.test.d.ts.map +1 -0
- package/dist/analyzer/path-props.unit.test.d.ts +5 -0
- package/dist/analyzer/path-props.unit.test.d.ts.map +1 -0
- package/dist/analyzer/perfect-variants.d.ts +49 -0
- package/dist/analyzer/perfect-variants.d.ts.map +1 -0
- package/dist/analyzer/perfect-variants.unit.test.d.ts +5 -0
- package/dist/analyzer/perfect-variants.unit.test.d.ts.map +1 -0
- package/dist/analyzer/predicates.d.ts +31 -3
- package/dist/analyzer/predicates.d.ts.map +1 -1
- package/dist/analyzer/predicates.unit.test.d.ts +5 -0
- package/dist/analyzer/predicates.unit.test.d.ts.map +1 -0
- package/dist/analyzer/probe.d.ts +15 -0
- package/dist/analyzer/probe.d.ts.map +1 -0
- package/dist/analyzer/spectral.unit.test.d.ts +5 -0
- package/dist/analyzer/spectral.unit.test.d.ts.map +1 -0
- package/dist/analyzer/structural.d.ts +13 -0
- package/dist/analyzer/structural.d.ts.map +1 -0
- package/dist/analyzer/structure.d.ts.map +1 -1
- package/dist/analyzer/structure.unit.test.d.ts +5 -0
- package/dist/analyzer/structure.unit.test.d.ts.map +1 -0
- package/dist/analyzer/width.d.ts +33 -0
- package/dist/analyzer/width.d.ts.map +1 -0
- package/dist/analyzer/width.unit.test.d.ts +5 -0
- package/dist/analyzer/width.unit.test.d.ts.map +1 -0
- package/dist/cli-commands/analyze.d.ts +30 -0
- package/dist/cli-commands/analyze.d.ts.map +1 -0
- package/dist/cli-commands/evaluate.d.ts +64 -0
- package/dist/cli-commands/evaluate.d.ts.map +1 -0
- package/dist/cli-commands/generate.d.ts +34 -0
- package/dist/cli-commands/generate.d.ts.map +1 -0
- package/dist/cli-commands/validate.d.ts +32 -0
- package/dist/cli-commands/validate.d.ts.map +1 -0
- package/dist/cli-utils/arg-parser.d.ts +55 -0
- package/dist/cli-utils/arg-parser.d.ts.map +1 -0
- package/dist/cli-utils/arg-parser.unit.test.d.ts +5 -0
- package/dist/cli-utils/arg-parser.unit.test.d.ts.map +1 -0
- package/dist/cli-utils/error-formatter.d.ts +27 -0
- package/dist/cli-utils/error-formatter.d.ts.map +1 -0
- package/dist/cli-utils/format-detection.d.ts +25 -0
- package/dist/cli-utils/format-detection.d.ts.map +1 -0
- package/dist/cli-utils/format-detection.unit.test.d.ts +5 -0
- package/dist/cli-utils/format-detection.unit.test.d.ts.map +1 -0
- package/dist/cli-utils/graph-converter.d.ts +32 -0
- package/dist/cli-utils/graph-converter.d.ts.map +1 -0
- package/dist/cli-utils/graph-converter.unit.test.d.ts +5 -0
- package/dist/cli-utils/graph-converter.unit.test.d.ts.map +1 -0
- package/dist/cli-utils/graph-loader.d.ts +30 -0
- package/dist/cli-utils/graph-loader.d.ts.map +1 -0
- package/dist/cli-utils/spec-utils.d.ts +30 -0
- package/dist/cli-utils/spec-utils.d.ts.map +1 -0
- package/dist/cli.js +11416 -15
- package/dist/domain/claims.d.ts +56 -0
- package/dist/domain/claims.d.ts.map +1 -0
- package/dist/domain/index.d.ts +8 -0
- package/dist/domain/index.d.ts.map +1 -0
- package/dist/domain/tables.d.ts +66 -0
- package/dist/domain/tables.d.ts.map +1 -0
- package/dist/experiments/baselines/betweenness-ranking.d.ts +38 -0
- package/dist/experiments/baselines/betweenness-ranking.d.ts.map +1 -0
- package/dist/experiments/baselines/cross-seed-affinity.d.ts +141 -0
- package/dist/experiments/baselines/cross-seed-affinity.d.ts.map +1 -0
- package/dist/experiments/baselines/degree-sum-ranking.d.ts +38 -0
- package/dist/experiments/baselines/degree-sum-ranking.d.ts.map +1 -0
- package/dist/experiments/baselines/degree-surprise.d.ts +134 -0
- package/dist/experiments/baselines/degree-surprise.d.ts.map +1 -0
- package/dist/experiments/baselines/delayed-termination.d.ts +138 -0
- package/dist/experiments/baselines/delayed-termination.d.ts.map +1 -0
- package/dist/experiments/baselines/ensemble-expansion.d.ts +123 -0
- package/dist/experiments/baselines/ensemble-expansion.d.ts.map +1 -0
- package/dist/experiments/baselines/frontier-balanced.d.ts +3 -0
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- package/dist/formats/ucinet/parse.unit.test.d.ts.map +1 -0
- package/dist/generation/generators/bipartite.unit.test.d.ts +2 -0
- package/dist/generation/generators/bipartite.unit.test.d.ts.map +1 -0
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- package/dist/generation/generators/core-structures.unit.test.d.ts.map +1 -0
- package/dist/generation/generators/density-helpers.d.ts.map +1 -1
- package/dist/generation/generators/density-helpers.unit.test.d.ts +2 -0
- package/dist/generation/generators/density-helpers.unit.test.d.ts.map +1 -0
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- package/dist/generation/generators/edge-generator.unit.test.d.ts.map +1 -0
- package/dist/generation/generators/forbidden-subgraph.d.ts +83 -0
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- package/dist/generation/generators/geometric.unit.test.d.ts.map +1 -0
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- package/dist/generation/generators/invariants.unit.test.d.ts.map +1 -0
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- package/dist/generation/generators/structure-handlers.unit.test.d.ts.map +1 -0
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- package/dist/generation/generators/symmetry.unit.test.d.ts.map +1 -0
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- package/dist/generation/generators/width.d.ts.map +1 -0
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- package/dist/generation/spec/advanced.unit.test.d.ts.map +1 -0
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- package/dist/generation/spec/core.d.ts.map +1 -1
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- package/dist/generation/spec/core.unit.test.d.ts.map +1 -0
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- package/dist/generation/spec/forbidden-subgraph.d.ts.map +1 -0
- package/dist/generation/spec/geometric.d.ts +28 -9
- package/dist/generation/spec/geometric.d.ts.map +1 -1
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- package/dist/generation/spec/geometric.unit.test.d.ts.map +1 -0
- package/dist/generation/spec/index.d.ts +1 -1
- package/dist/generation/spec/index.d.ts.map +1 -1
- package/dist/generation/spec/intersection.d.ts +49 -0
- package/dist/generation/spec/intersection.d.ts.map +1 -0
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- package/dist/generation/spec/invariants.unit.test.d.ts.map +1 -0
- package/dist/generation/spec/metrics.unit.test.d.ts +5 -0
- package/dist/generation/spec/metrics.unit.test.d.ts.map +1 -0
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- package/dist/generation/spec/network.unit.test.d.ts.map +1 -0
- package/dist/generation/spec/new-classes-index.d.ts +15 -0
- package/dist/generation/spec/new-classes-index.d.ts.map +1 -0
- package/dist/generation/spec/path-cycle.unit.test.d.ts +5 -0
- package/dist/generation/spec/path-cycle.unit.test.d.ts.map +1 -0
- package/dist/generation/spec/perfect-variants.d.ts +39 -0
- package/dist/generation/spec/perfect-variants.d.ts.map +1 -0
- package/dist/generation/spec/probe.d.ts +29 -0
- package/dist/generation/spec/probe.d.ts.map +1 -0
- package/dist/generation/spec/products.unit.test.d.ts +5 -0
- package/dist/generation/spec/products.unit.test.d.ts.map +1 -0
- package/dist/generation/spec/regularity.unit.test.d.ts +5 -0
- package/dist/generation/spec/regularity.unit.test.d.ts.map +1 -0
- package/dist/generation/spec/structural.d.ts +12 -1
- package/dist/generation/spec/structural.d.ts.map +1 -1
- package/dist/generation/spec/structural.unit.test.d.ts +5 -0
- package/dist/generation/spec/structural.unit.test.d.ts.map +1 -0
- package/dist/generation/spec/symmetry.unit.test.d.ts +5 -0
- package/dist/generation/spec/symmetry.unit.test.d.ts.map +1 -0
- package/dist/generation/spec/test.unit.test.d.ts +5 -0
- package/dist/generation/spec/test.unit.test.d.ts.map +1 -0
- package/dist/generation/spec/width.d.ts +29 -0
- package/dist/generation/spec/width.d.ts.map +1 -0
- package/dist/generation/spec.d.ts +23 -4
- package/dist/generation/spec.d.ts.map +1 -1
- package/dist/index.cjs +31 -31
- package/dist/index.d.ts +3 -1
- package/dist/index.d.ts.map +1 -1
- package/dist/index.js +6941 -4768
- package/dist/index.umd.js +33 -33
- package/dist/interfaces/graph-expander.d.ts +44 -2
- package/dist/interfaces/graph-expander.d.ts.map +1 -1
- package/dist/interfaces/graph-expander.unit.test.d.ts +2 -0
- package/dist/interfaces/graph-expander.unit.test.d.ts.map +1 -0
- package/dist/interfaces/readable-graph.unit.test.d.ts +2 -0
- package/dist/interfaces/readable-graph.unit.test.d.ts.map +1 -0
- package/dist/registries/index.d.ts +16 -0
- package/dist/registries/index.d.ts.map +1 -0
- package/dist/registries/register-cases.d.ts +91 -0
- package/dist/registries/register-cases.d.ts.map +1 -0
- package/dist/registries/register-overlap-suts.d.ts +28 -0
- package/dist/registries/register-overlap-suts.d.ts.map +1 -0
- package/dist/registries/register-ranking-cases.d.ts +36 -0
- package/dist/registries/register-ranking-cases.d.ts.map +1 -0
- package/dist/registries/register-ranking-suts.d.ts +83 -0
- package/dist/registries/register-ranking-suts.d.ts.map +1 -0
- package/dist/registries/register-suts.d.ts +55 -0
- package/dist/registries/register-suts.d.ts.map +1 -0
- package/dist/suts/degree-prioritised-v1.0.0.d.ts +56 -0
- package/dist/suts/degree-prioritised-v1.0.0.d.ts.map +1 -0
- package/dist/suts/entropy-guided-v1.0.0.d.ts +55 -0
- package/dist/suts/entropy-guided-v1.0.0.d.ts.map +1 -0
- package/dist/suts/heterogeneity-aware-v1.0.0.d.ts +57 -0
- package/dist/suts/heterogeneity-aware-v1.0.0.d.ts.map +1 -0
- package/dist/suts/multi-frontier-adaptive-v1.0.0.d.ts +56 -0
- package/dist/suts/multi-frontier-adaptive-v1.0.0.d.ts.map +1 -0
- package/dist/suts/path-preserving-v1.0.0.d.ts +58 -0
- package/dist/suts/path-preserving-v1.0.0.d.ts.map +1 -0
- package/dist/suts/path-salience-v1.0.0.d.ts +57 -0
- package/dist/suts/path-salience-v1.0.0.d.ts.map +1 -0
- package/dist/suts/random-ranking-v1.0.0.d.ts +50 -0
- package/dist/suts/random-ranking-v1.0.0.d.ts.map +1 -0
- package/dist/suts/retrospective-salience-v1.0.0.d.ts +57 -0
- package/dist/suts/retrospective-salience-v1.0.0.d.ts.map +1 -0
- package/dist/suts/shortest-ranking-v1.0.0.d.ts +49 -0
- package/dist/suts/shortest-ranking-v1.0.0.d.ts.map +1 -0
- package/dist/suts/standard-bfs-v1.0.0.d.ts +53 -0
- package/dist/suts/standard-bfs-v1.0.0.d.ts.map +1 -0
- package/dist/types/graph-core.d.ts +176 -0
- package/dist/types/graph-core.d.ts.map +1 -0
- package/dist/types/graph-core.unit.test.d.ts +5 -0
- package/dist/types/graph-core.unit.test.d.ts.map +1 -0
- package/dist/utils/graph-adapters.d.ts +101 -0
- package/dist/utils/graph-adapters.d.ts.map +1 -0
- package/dist/utils/graph-adapters.unit.test.d.ts +5 -0
- package/dist/utils/graph-adapters.unit.test.d.ts.map +1 -0
- package/dist/utils/wayback.unit.test.d.ts +2 -0
- package/dist/utils/wayback.unit.test.d.ts.map +1 -0
- package/dist/validation/basic-validators.unit.test.d.ts +2 -0
- package/dist/validation/basic-validators.unit.test.d.ts.map +1 -0
- package/dist/validation/coloring-validator.unit.test.d.ts +2 -0
- package/dist/validation/coloring-validator.unit.test.d.ts.map +1 -0
- package/dist/validation/connectivity-validators.unit.test.d.ts +2 -0
- package/dist/validation/connectivity-validators.unit.test.d.ts.map +1 -0
- package/dist/validation/degree-validators.unit.test.d.ts +2 -0
- package/dist/validation/degree-validators.unit.test.d.ts.map +1 -0
- package/dist/validation/density-connectivity.unit.test.d.ts +2 -0
- package/dist/validation/density-connectivity.unit.test.d.ts.map +1 -0
- package/dist/validation/extremal.unit.test.d.ts +2 -0
- package/dist/validation/extremal.unit.test.d.ts.map +1 -0
- package/dist/validation/flow-validator.unit.test.d.ts +2 -0
- package/dist/validation/flow-validator.unit.test.d.ts.map +1 -0
- package/dist/validation/forbidden-subgraph-helpers.d.ts +45 -0
- package/dist/validation/forbidden-subgraph-helpers.d.ts.map +1 -0
- package/dist/validation/forbidden-subgraph.d.ts +66 -0
- package/dist/validation/forbidden-subgraph.d.ts.map +1 -0
- package/dist/validation/geometric.unit.test.d.ts +2 -0
- package/dist/validation/geometric.unit.test.d.ts.map +1 -0
- package/dist/validation/helper-functions.d.ts +1 -0
- package/dist/validation/helper-functions.d.ts.map +1 -1
- package/dist/validation/helper-functions.unit.test.d.ts +2 -0
- package/dist/validation/helper-functions.unit.test.d.ts.map +1 -0
- package/dist/validation/index.d.ts +4 -0
- package/dist/validation/index.d.ts.map +1 -1
- package/dist/validation/intersection.d.ts +17 -0
- package/dist/validation/intersection.d.ts.map +1 -0
- package/dist/validation/invariant.unit.test.d.ts +2 -0
- package/dist/validation/invariant.unit.test.d.ts.map +1 -0
- package/dist/validation/minor.unit.test.d.ts +2 -0
- package/dist/validation/minor.unit.test.d.ts.map +1 -0
- package/dist/validation/network.d.ts.map +1 -1
- package/dist/validation/network.unit.test.d.ts +2 -0
- package/dist/validation/network.unit.test.d.ts.map +1 -0
- package/dist/validation/path-cycle.unit.test.d.ts +2 -0
- package/dist/validation/path-cycle.unit.test.d.ts.map +1 -0
- package/dist/validation/perfect-variants.d.ts +30 -0
- package/dist/validation/perfect-variants.d.ts.map +1 -0
- package/dist/validation/perfect-variants.unit.test.d.ts +5 -0
- package/dist/validation/perfect-variants.unit.test.d.ts.map +1 -0
- package/dist/validation/probe.d.ts +17 -0
- package/dist/validation/probe.d.ts.map +1 -0
- package/dist/validation/product.unit.test.d.ts +2 -0
- package/dist/validation/product.unit.test.d.ts.map +1 -0
- package/dist/validation/robustness.unit.test.d.ts +2 -0
- package/dist/validation/robustness.unit.test.d.ts.map +1 -0
- package/dist/validation/structural-class.d.ts.map +1 -1
- package/dist/validation/structural-class.unit.test.d.ts +2 -0
- package/dist/validation/structural-class.unit.test.d.ts.map +1 -0
- package/dist/validation/symmetry.d.ts.map +1 -1
- package/dist/validation/symmetry.unit.test.d.ts +2 -0
- package/dist/validation/symmetry.unit.test.d.ts.map +1 -0
- package/dist/validation/treewidth-validator.unit.test.d.ts +2 -0
- package/dist/validation/treewidth-validator.unit.test.d.ts.map +1 -0
- package/dist/validation/width.d.ts +27 -0
- package/dist/validation/width.d.ts.map +1 -0
- package/dist/validation/width.unit.test.d.ts +5 -0
- package/dist/validation/width.unit.test.d.ts.map +1 -0
- package/package.json +25 -2
package/README.md
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# GraphBox
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This file provides guidance to Claude Code (claude.ai/code) when working with this repository.
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**GraphBox** = Graph Sandbox + Graph Toolbox
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Abstract and experimental graph algorithms for academic research. The name reflects its dual purpose:
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pnpm install graphbox
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```
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##
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## Commands
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```bash
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# Development
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pnpm install # Install dependencies
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pnpm typecheck # TypeScript type checking
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# Experiments (high memory required)
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NODE_OPTIONS="--max-old-space-size=8192" pnpm test:metrics # Run experiments, generate metrics
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pnpm gen:latex-tables # Generate LaTeX tables from metrics
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pnpm update:thesis-tables # Full: experiments + LaTeX table generation
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# Standalone experiment orchestrator
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npx graphbox generate # Generate
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## Key Features
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## Architecture
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### Experiment Framework
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The evaluation harness provides **reusable, repeatable, reproducible** experiments:
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1. **`src/experiments/run-experiments.ts`** - Orchestrator that runs all experiments
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- `seeded-expansion.ts` - N=1 ego-network, N=2 bidirectional, N>=3 multi-seed
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console.log(result.visited); // Array of visited node IDs
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```
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4. **`scripts/export-csv.ts`** - Exports metrics as per-category CSV files for pgfplotstable
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**Pipeline:** Experiments → MetricsCollector → test-metrics.json → CSV files → LaTeX pgfplotstable
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import { extractEgoNetwork } from 'graphbox';
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### Three Algorithms Evaluated
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- Statistical significance testing (Mann-Whitney U, Cohen's d)
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### Graph
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### Graph Abstraction
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edgeDensity: 0.15
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### Path Aliases
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TypeScript paths configured in `tsconfig.json`:
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```typescript
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@graph/algorithms/* → src/algorithms/*
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@graph/interfaces/* → src/interfaces/*
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###
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This package is part of academic research work. Contributions are welcome, please open an issue first.
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## Related Projects
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- **BibGraph
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- **[BibGraph](https://github.com/Mearman/BibGraph)** - React SPA for OpenAlex literature discovery
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/**
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* Integration tests for Bipartite graph class
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*
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* Bipartite: vertices can be partitioned into two disjoint sets
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* such that every edge connects a vertex in one set to one in the other.
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{"version":3,"file":"bipartite.integration.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/bipartite.integration.test.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG"}
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/**
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*
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* Equivalent: has a perfect elimination ordering.
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* Examples: trees, complete graphs, interval graphs.
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{"version":3,"file":"chordal.integration.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/chordal.integration.test.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG"}
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{"version":3,"file":"cliquewidth.integration.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/cliquewidth.integration.test.ts"],"names":[],"mappings":"AAAA;;;;;GAKG"}
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/**
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* Integration tests for Cograph graph class
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*
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* Cograph: P4-free graph (contains no induced path on 4 vertices).
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* Can be constructed recursively using disjoint union and complement operations.
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*/
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export {};
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{"version":3,"file":"cograph.integration.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/cograph.integration.test.ts"],"names":[],"mappings":"AAAA;;;;;GAKG"}
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/**
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* Integration tests for Comparability graph class
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*
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* Comparability: edges can be transitively oriented (partial order).
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* Equivalent: intersection graph of a family of sets ordered by inclusion.
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*/
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export {};
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{"version":3,"file":"comparability.integration.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/comparability.integration.test.ts"],"names":[],"mappings":"AAAA;;;;;GAKG"}
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/**
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* Integration tests for Eulerian graph class
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*
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* Eulerian: has a circuit that visits every edge exactly once.
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* Equivalent: connected graph where all vertices have even degree.
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* Semi-Eulerian: has a trail (not circuit) visiting every edge exactly once.
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*/
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{"version":3,"file":"eulerian.integration.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/eulerian.integration.test.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG"}
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{"version":3,"file":"hamiltonian.integration.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/hamiltonian.integration.test.ts"],"names":[],"mappings":"AAAA;;;;;GAKG"}
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import { AnalyzerGraph } from '../../analyzer/types';
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/**
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{"version":3,"file":"helpers.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/helpers.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,KAAK,EAAgB,aAAa,EAAkB,MAAM,sBAAsB,CAAC;AACxF,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,4BAA4B,CAAC;AAE5D;;;GAGG;AACH,eAAO,MAAM,eAAe,GAAI,WAAW,SAAS,KAAG,aAiBtD,CAAC"}
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/**
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* Integration tests for Permutation graph class
|
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|
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*
|
|
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|
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* Permutation: intersection graph of line segments between two parallel lines.
|
|
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|
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* Permutation graphs are comparability graphs and co-comparability graphs.
|
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*/
|
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export {};
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{"version":3,"file":"ptolemaic.integration.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/ptolemaic.integration.test.ts"],"names":[],"mappings":"AAAA;;;;;GAKG"}
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{"version":3,"file":"quasiline.integration.test.d.ts","sourceRoot":"","sources":["../../../src/__tests__/integration/quasiline.integration.test.ts"],"names":[],"mappings":"AAAA;;;;;GAKG"}
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{"version":3,"file":"connected-components.unit.test.d.ts","sourceRoot":"","sources":["../../../src/algorithms/analysis/connected-components.unit.test.ts"],"names":[],"mappings":"AAAA;;GAEG"}
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{"version":3,"file":"cycle-detection.unit.test.d.ts","sourceRoot":"","sources":["../../../src/algorithms/analysis/cycle-detection.unit.test.ts"],"names":[],"mappings":"AAAA;;GAEG"}
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{"version":3,"file":"topological-sort.unit.test.d.ts","sourceRoot":"","sources":["../../../src/algorithms/analysis/topological-sort.unit.test.ts"],"names":[],"mappings":"AAAA;;GAEG"}
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{"version":3,"file":"infomap.unit.test.d.ts","sourceRoot":"","sources":["../../../src/algorithms/clustering/infomap.unit.test.ts"],"names":[],"mappings":"AAAA;;GAEG"}
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{"version":3,"file":"label-propagation.unit.test.d.ts","sourceRoot":"","sources":["../../../src/algorithms/clustering/label-propagation.unit.test.ts"],"names":[],"mappings":"AAAA;;GAEG"}
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{"version":3,"file":"leiden.unit.test.d.ts","sourceRoot":"","sources":["../../../src/algorithms/clustering/leiden.unit.test.ts"],"names":[],"mappings":"AAAA;;GAEG"}
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|
@@ -2,6 +2,22 @@ import { Graph } from '../graph/graph';
|
|
|
2
2
|
import { Community } from '../types/clustering-types';
|
|
3
3
|
import { Edge, Node } from '../types/graph';
|
|
4
4
|
import { WeightFunction } from '../types/weight-function';
|
|
5
|
+
/**
|
|
6
|
+
* Result of Louvain community detection including performance statistics.
|
|
7
|
+
*/
|
|
8
|
+
export interface LouvainResult<N extends Node> {
|
|
9
|
+
/** Detected communities */
|
|
10
|
+
communities: Community<N>[];
|
|
11
|
+
/** Performance and convergence statistics */
|
|
12
|
+
stats: {
|
|
13
|
+
/** Total iterations across all hierarchy levels */
|
|
14
|
+
totalIterations: number;
|
|
15
|
+
/** Number of hierarchy levels processed */
|
|
16
|
+
hierarchyLevels: number;
|
|
17
|
+
/** Runtime in milliseconds */
|
|
18
|
+
runtimeMs: number;
|
|
19
|
+
};
|
|
20
|
+
}
|
|
5
21
|
/**
|
|
6
22
|
* Get adaptive convergence threshold based on graph size.
|
|
7
23
|
* @param nodeCount - Number of nodes in graph
|
|
@@ -86,17 +102,17 @@ export declare const shuffle: <T>(array: T[], seed?: number) => T[];
|
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|
86
102
|
* // ... add nodes and edges ...
|
|
87
103
|
*
|
|
88
104
|
* // Basic usage (adaptive defaults)
|
|
89
|
-
* const communities = detectCommunities(graph);
|
|
90
|
-
* console.log(`Found ${communities.length} communities`);
|
|
105
|
+
* const { communities, stats } = detectCommunities(graph);
|
|
106
|
+
* console.log(`Found ${communities.length} communities in ${stats.totalIterations} iterations`);
|
|
91
107
|
*
|
|
92
108
|
* // Quality-first mode
|
|
93
|
-
* const
|
|
109
|
+
* const result = detectCommunities(graph, { mode: "best" });
|
|
94
110
|
*
|
|
95
111
|
* // Speed-first mode for large graphs
|
|
96
|
-
* const
|
|
112
|
+
* const fast = detectCommunities(graph, { mode: "random", maxIterations: 10 });
|
|
97
113
|
*
|
|
98
114
|
* // Reproducible results
|
|
99
|
-
* const
|
|
115
|
+
* const deterministic = detectCommunities(graph, { seed: 42 });
|
|
100
116
|
* ```
|
|
101
117
|
*/
|
|
102
118
|
export declare const detectCommunities: <N extends Node, E extends Edge>(graph: Graph<N, E>, options?: {
|
|
@@ -106,5 +122,5 @@ export declare const detectCommunities: <N extends Node, E extends Edge>(graph:
|
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|
106
122
|
seed?: number;
|
|
107
123
|
minModularityIncrease?: number;
|
|
108
124
|
maxIterations?: number;
|
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|
-
}) =>
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|
+
}) => LouvainResult<N>;
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|
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{"version":3,"file":"louvain.d.ts","sourceRoot":"","sources":["../../../src/algorithms/clustering/louvain.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG;AAEH,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,gBAAgB,CAAC;AAE5C,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,2BAA2B,CAAC;AAC3D,OAAO,KAAK,EAAE,IAAI,EAAC,IAAI,EAAE,MAAM,gBAAgB,CAAC;AAChD,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,0BAA0B,CAAC;
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