gramene-search 1.6.6 → 1.6.8

package/.parcel-cache/snapshot-369948a06d23ec44.txt

@@ -1,2 +1,2 @@
-152020407
-1729029155640539000
+156006950
+1729099800436043000

package/.parcel-cache/snapshot-524f09471ce7017b.txt

@@ -1,2 +1,2 @@
-152019833
-1729029148314911000
+156005280
+1729099795714539000

package/dist/index.js

@@ -3287,87 +3287,12 @@ var $54c74a4689d5a778$export$2e2bcd8739ae039 = (0, $gXNCa$reduxbundlerreact.conn
 
 
 
-
 const $283508ffcf8a47c4$var$ggURL = {
     IRRI: "https://gringlobal.irri.org/gringlobal/accessiondetail?id=",
     ARS: "https://npgsweb.ars-grin.gov/gringlobal/accessiondetail.aspx?id=",
     ICRISAT: "https://genebank.icrisat.org/IND/PassportSummary?ID=",
     sorbmutdb: "https://www.depts.ttu.edu/igcast/sorbmutdb.php"
 };
-const $283508ffcf8a47c4$var$metaRenderer = (params)=>{
-    if (params.value.field === "accessions") {
-        const accs = params.value.accessions;
-        return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)((0, $gXNCa$reactbootstrap.Accordion), {
-            children: /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)((0, $gXNCa$reactbootstrap.Accordion).Item, {
-                children: [
-                    /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)((0, $gXNCa$reactbootstrap.Accordion).Header, {
-                        children: accs.length
-                    }),
-                    /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)((0, $gXNCa$reactbootstrap.Accordion).Body, {
-                        children: /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("p", {
-                            children: 'This is where the "table" goes'
-                        })
-                    })
-                ]
-            })
-        });
-    }
-    if (params.value.field === "germplasm") {
-        const genebank = params.value.stock_center;
-        const url = $283508ffcf8a47c4$var$ggURL[genebank];
-        if (params.value.germplasm_dbid && url && params.value.germplasm_dbid !== "0") return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("a", {
-            target: "_blank",
-            href: `${url}${params.value.germplasm_dbid}`,
-            children: [
-                params.value.pub_id,
-                " (",
-                genebank,
-                ")"
-            ]
-        });
-        if (genebank === "sorbmutdb") return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("form", {
-            id: params.value.pub_id,
-            action: url,
-            method: "post",
-            target: "_blank",
-            children: [
-                /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("input", {
-                    type: "hidden",
-                    name: "search",
-                    value: params.value.gene_id.replace("SORBI_3", "Sobic.")
-                }),
-                /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("input", {
-                    type: "hidden",
-                    name: "submit",
-                    value: "Search"
-                }),
-                /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("button", {
-                    type: "submit",
-                    className: "button-like-link",
-                    children: "SorbMutDB"
-                })
-            ]
-        });
-    }
-    if (params.value.field === "search") {
-        const currentURL = new URL(window.location.href);
-        currentURL.search = "";
-        currentURL.searchParams.set("category", "Germplasm");
-        currentURL.searchParams.set("fq_field", `VEP__merged__${params.value.pop_type}__attr_ss`);
-        currentURL.searchParams.set("fq_value", params.value.ens_id);
-        currentURL.searchParams.set("name", params.value.ens_id);
-        return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)((0, $gXNCa$reactbootstrap.Button), {
-            size: "sm",
-            href: currentURL.toString(),
-            children: "Search"
-        });
-    }
-    return params.value.label;
-};
-const $283508ffcf8a47c4$var$sortByLabel = (valueA, valueB, nodeA, nodeB, isDescending)=>{
-    if (valueA.label === valueB.label) return 0;
-    return valueA.label > valueB.label ? 1 : -1;
-};
 const $283508ffcf8a47c4$var$rice_studies = {
     "1": {
         label: "Rice 3K",
@@ -3428,10 +3353,10 @@ const $283508ffcf8a47c4$var$study_info = {
     "oryza_sativazs97": $283508ffcf8a47c4$var$rice_studies
 };
 const $283508ffcf8a47c4$var$AccessionLink = ({ germplasm: germplasm, gene_id: gene_id })=>{
+    const genebank = germplasm.stock_center;
+    const url = $283508ffcf8a47c4$var$ggURL[genebank];
     if (germplasm.germplasm_dbid) {
         const germ_id = germplasm.germplasm_dbid;
-        const genebank = germplasm.stock_center;
-        const url = $283508ffcf8a47c4$var$ggURL[genebank];
         if (germ_id && url && germ_id !== "0") return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("a", {
             target: "_blank",
             href: `${url}${germ_id}`,
@@ -3442,30 +3367,30 @@ const $283508ffcf8a47c4$var$AccessionLink = ({ germplasm: germplasm, gene_id: ge
                 ")"
             ]
         });
-        if (genebank === "sorbmutdb") return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("form", {
-            id: germplasm.pub_id,
-            action: url,
-            method: "post",
-            target: "_blank",
-            children: [
-                /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("input", {
-                    type: "hidden",
-                    name: "search",
-                    value: gene_id.replace("SORBI_3", "Sobic.")
-                }),
-                /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("input", {
-                    type: "hidden",
-                    name: "submit",
-                    value: "Search"
-                }),
-                /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("button", {
-                    type: "submit",
-                    className: "button-like-link",
-                    children: "SorbMutDB"
-                })
-            ]
-        });
     }
+    if (genebank === "sorbmutdb") return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("form", {
+        id: germplasm.pub_id,
+        action: url,
+        method: "post",
+        target: "_blank",
+        children: [
+            /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("input", {
+                type: "hidden",
+                name: "search",
+                value: gene_id.replace("SORBI_3", "Sobic.")
+            }),
+            /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("input", {
+                type: "hidden",
+                name: "submit",
+                value: "Search"
+            }),
+            /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("button", {
+                type: "submit",
+                className: "button-like-link",
+                children: "SorbMutDB"
+            })
+        ]
+    });
     return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("span", {
         children: germplasm.pub_id
     });
@@ -3534,7 +3459,6 @@ const $283508ffcf8a47c4$var$GridWithGroups = ({ groups: groups, gene_id: gene_id
         if (row.summary) initialExpanded[row.group] = row.tally < $283508ffcf8a47c4$var$THRESHOLD;
     });
     const [expandedGroups, setExpandedGroups] = (0, $gXNCa$react.useState)(initialExpanded);
-    // const gridRef = useRef();
     // Toggle group visibility
     const toggleGroup = (group)=>{
         setExpandedGroups((prevExpandedGroups)=>({
@@ -3622,9 +3546,6 @@ const $283508ffcf8a47c4$var$GridWithGroups = ({ groups: groups, gene_id: gene_id
     const defaultColDef = {
         sortable: false,
         cellStyle: (params)=>{
-            // if (!params.data.summary) {
-            //   return {paddingLeft: '30px'};
-            // }
             if (params.data.summary) return {
                 cursor: "pointer"
             };