gramene-search 1.6.26 → 1.6.28
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.parcel-cache/83e7562660f7cc15-BundleGraph +0 -0
- package/.parcel-cache/9a0d07555444f4da-AssetGraph +0 -0
- package/.parcel-cache/d3a1b9507cb44047-AssetGraph +0 -0
- package/.parcel-cache/data.mdb +0 -0
- package/.parcel-cache/dc1da35000e13623-RequestGraph +0 -0
- package/.parcel-cache/lock.mdb +0 -0
- package/.parcel-cache/snapshot-dc1da35000e13623.txt +2 -2
- package/dist/index.js +33 -41
- package/dist/index.js.map +1 -1
- package/package.json +1 -1
- package/src/components/results/details/Expression.js +31 -30
- package/src/demo.js +4 -4
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package/.parcel-cache/data.mdb
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package/.parcel-cache/lock.mdb
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package/dist/index.js
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@@ -2243,7 +2243,11 @@ const $9e29a4f60318db7a$var$Detail = (props)=>{
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(0, $gXNCa$react.useEffect)(()=>{
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const tid = Math.floor(gene.taxon_id / 1000);
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if (props.expressionStudies[tid]) {
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let eList = props.expressionStudies[tid]
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let eList = props.expressionStudies[tid];
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if (props.searchResult.hasOwnProperty('expressed_in_gxa_attr_ss')) {
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const in_gxa = new Set(props.searchResult.expressed_in_gxa_attr_ss);
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eList = props.expressionStudies[tid].filter((e)=>in_gxa.has(e._id));
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}
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setAtlasExperimentList(eList);
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let refExp = eList.filter((e)=>e.isRef);
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if (refExp.length === 1) setAtlasExperiment(refExp[0]._id);
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@@ -2254,10 +2258,12 @@ const $9e29a4f60318db7a$var$Detail = (props)=>{
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props.expressionStudies
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]);
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let paralogs_url;
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let gene_url = `https://dev.gramene.org/static/atlasWidget.html?genes=${gene.atlas_id || gene._id}&localAPI=${isLocal}`;
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let gene_url = `https://dev.gramene.org/static/atlasWidget.html?genes=${gene.atlas_id || gene._id}&experiment=${atlasExperiment}&localAPI=${isLocal}`;
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let paralogs = [];
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if (gene.homology && gene.homology.homologous_genes && gene.homology.homologous_genes.within_species_paralog) paralogs = gene.homology.homologous_genes.within_species_paralog;
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if (paralogs.length > 1 && atlasExperiment) paralogs_url = `https://dev.gramene.org/static/atlasWidget.html?genes=${paralogs.join(' ')}&experiment=${atlasExperiment}&localAPI=${isLocal}`;
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const ref = (0, $gXNCa$react.useRef)(null);
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const ref2 = (0, $gXNCa$react.useRef)(null);
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return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)((0, $gXNCa$reactbootstrap.Tabs), {
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children: [
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paralogs_url && /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)((0, $gXNCa$reactbootstrap.Tab), {
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eventKey: "paralogs",
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title: `Paralogs`,
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children: [
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/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.
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checked: isLocal,
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onChange: handleLocalAPIChange
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}),
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/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)((0, $gXNCa$reactbootstrap.Form).Group, {
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as: (0, $gXNCa$reactbootstrap.Row),
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className: "mb-3",
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controlId: "formGroupExperiment",
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/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)((0, $gXNCa$reactbootstrap.Form).Select, {
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"aria-label": "experiment selector",
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placeholder: "Select experiment",
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onChange: (e)=>setAtlasExperiment(e.target.value),
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children: atlasExperimentList.map((e, idx)=>/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("option", {
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value: e._id,
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children: [
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children: "Experiment"
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}),
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/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)((0, $gXNCa$reactbootstrap.Col), {
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sm: 5,
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children: /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)((0, $gXNCa$reactbootstrap.Form).Select, {
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defaultValue: atlasExperiment,
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onChange: (e)=>setAtlasExperiment(e.target.value),
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children: atlasExperimentList.map((experiment, index)=>/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)("option", {
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value: experiment._id,
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children: experiment.description || experiment._id
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}, index))
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})
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})
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e.type,
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": ",
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e.description || e._id
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]
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})
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]
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}, idx))
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}),
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/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)($9e29a4f60318db7a$var$DynamicIframe, {
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url: paralogs_url
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eventKey: "gene",
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title: "All Studies",
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children: [
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/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)((0, $gXNCa$reactbootstrap.Form).
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/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)((0, $gXNCa$reactbootstrap.Form).Select, {
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"aria-label": "experiment selector",
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placeholder: "Select experiment",
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onChange: (e)=>setAtlasExperiment(e.target.value),
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children: atlasExperimentList.map((e, idx)=>/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("option", {
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value: e._id,
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children: [
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e.type,
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": ",
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e.description || e._id
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]
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}, idx))
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}),
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/*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsx)($9e29a4f60318db7a$var$DynamicIframe, {
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url: gene_url
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});
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};
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var $9e29a4f60318db7a$export$2e2bcd8739ae039 = (0, $gXNCa$reduxbundlerreact.connect)(//
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'selectExpressionStudies', 'doRequestParalogExpression',
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var $9e29a4f60318db7a$export$2e2bcd8739ae039 = (0, $gXNCa$reduxbundlerreact.connect)(//'selectParalogExpression',
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'selectExpressionStudies', //'doRequestParalogExpression',
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$9e29a4f60318db7a$var$Detail);
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