gramene-search 1.6.2 → 1.6.4

package/.parcel-cache/snapshot-2b56c4c5947cf88b.txt

@@ -0,0 +1,2 @@
+143878288
+1728587320560471000

package/.parcel-cache/snapshot-369948a06d23ec44.txt

@@ -1,2 +1,2 @@
-126799912
-1728106117770698000
+143882109
+1728587443985155000

package/.parcel-cache/snapshot-524f09471ce7017b.txt

@@ -0,0 +1,2 @@
+143881606
+1728587434625576000

package/.parcel-cache/snapshot-62897db56b555037.txt

@@ -0,0 +1,2 @@
+135678894
+1728491020709461000

package/dist/Study.5ff9518c.js

@@ -0,0 +1,137 @@
+var $eTR7Q$reactjsxruntime = require("react/jsx-runtime");
+var $eTR7Q$react = require("react");
+var $eTR7Q$reduxbundlerreact = require("redux-bundler-react");
+var $eTR7Q$aggridreact = require("ag-grid-react");
+require("ag-grid-community/styles/ag-grid.css");
+require("ag-grid-community/styles/ag-theme-quartz.css");
+
+
+function $parcel$defineInteropFlag(a) {
+  Object.defineProperty(a, '__esModule', {value: true, configurable: true});
+}
+
+function $parcel$export(e, n, v, s) {
+  Object.defineProperty(e, n, {get: v, set: s, enumerable: true, configurable: true});
+}
+
+      var $parcel$global = globalThis;
+    var parcelRequire = $parcel$global["parcelRequire7a41"];
+var parcelRegister = parcelRequire.register;
+parcelRegister("7zuJ6", function(module, exports) {
+
+$parcel$defineInteropFlag(module.exports);
+
+$parcel$export(module.exports, "default", () => $5833a2eeefc77457$export$2e2bcd8739ae039);
+
+
+
+
+
+
+const $5833a2eeefc77457$var$metaRenderer = (params)=>{
+    if (params.value.ontology) return /*#__PURE__*/ (0, $eTR7Q$reactjsxruntime.jsx)("a", {
+        href: `http://purl.obolibrary.org/obo/${params.value.id.replace(":", "_")}`,
+        target: "_blank",
+        children: params.value.label
+    });
+    return params.value.label;
+};
+const $5833a2eeefc77457$var$sampleRenderer = (params)=>{
+    const sampleMeta = params.value;
+    return JSON.stringify(sampleMeta, null, 2);
+};
+const $5833a2eeefc77457$var$Study = (props)=>{
+    let samples = props.expressionSamples[props.id];
+    let sampleMetadata = [];
+    let metadataFields = [
+        {
+            field: "sampleId",
+            cellRenderer: $5833a2eeefc77457$var$sampleRenderer
+        }
+    ];
+    let isFactor = {};
+    samples.forEach((sample, idx)=>{
+        if (idx === 0) {
+            let factors = {
+                headerName: "Experimental Variables",
+                children: []
+            };
+            sample.factor.forEach((factor)=>{
+                factors.children.push({
+                    field: factor.type,
+                    cellRenderer: $5833a2eeefc77457$var$metaRenderer
+                });
+                isFactor[factor.type] = true;
+            });
+            metadataFields.push(factors);
+            let characteristics = {
+                headerName: "Sample Characteristics",
+                children: []
+            };
+            sample.characteristic.forEach((ch)=>{
+                if (!isFactor[ch.type]) characteristics.children.push({
+                    field: ch.type,
+                    cellRenderer: $5833a2eeefc77457$var$metaRenderer
+                });
+            });
+            metadataFields.push(characteristics);
+        }
+        let s_info = {
+            sampleId: sample
+        };
+        sample.factor.forEach((factor)=>{
+            s_info[factor.type] = {
+                label: factor.label
+            };
+            if (factor.ontology) {
+                s_info[factor.type]["ontology"] = factor.ontology;
+                s_info[factor.type]["id"] = factor.id;
+            }
+        });
+        sample.characteristic.forEach((ch)=>{
+            s_info[ch.type] = {
+                label: ch.label
+            };
+            if (ch.ontology) {
+                s_info[ch.type]["ontology"] = ch.ontology;
+                s_info[ch.type]["id"] = ch.id;
+            }
+        });
+        sampleMetadata.push(s_info);
+    });
+    const [rowData, setRowData] = (0, $eTR7Q$react.useState)(sampleMetadata);
+    const [colDefs, setColDefs] = (0, $eTR7Q$react.useState)(metadataFields);
+    const defaultColDef = (0, $eTR7Q$react.useMemo)(()=>{
+        return {
+            filter: true
+        };
+    }, []);
+    return /*#__PURE__*/ (0, $eTR7Q$reactjsxruntime.jsxs)("div", {
+        children: [
+            /*#__PURE__*/ (0, $eTR7Q$reactjsxruntime.jsx)("div", {
+                className: "ag-theme-quartz",
+                style: {
+                    height: `${44 * (samples.length + 2)}px`
+                },
+                children: /*#__PURE__*/ (0, $eTR7Q$reactjsxruntime.jsx)((0, $eTR7Q$aggridreact.AgGridReact), {
+                    rowData: rowData,
+                    columnDefs: colDefs,
+                    defaultColDef: defaultColDef
+                })
+            }),
+            /*#__PURE__*/ (0, $eTR7Q$reactjsxruntime.jsxs)("a", {
+                href: `https://www.ebi.ac.uk/gxa/experiments/${props.id}`,
+                children: [
+                    "EBI Atlas Experiment: ",
+                    props.id
+                ]
+            })
+        ]
+    });
+};
+var $5833a2eeefc77457$export$2e2bcd8739ae039 = (0, $eTR7Q$reduxbundlerreact.connect)("selectExpressionSamples", "doToggleExpressionSample", $5833a2eeefc77457$var$Study);
+
+});
+
+
+//# sourceMappingURL=Study.5ff9518c.js.map

package/dist/Study.5ff9518c.js.map

@@ -0,0 +1 @@
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