gramene-search 1.2.43 → 1.2.45

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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@@ -1,2 +1,2 @@
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- 125067194
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- 1673033978158035000
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+ 274552998
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+ 1674495134815167000
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package/dist/index.js CHANGED
@@ -933,6 +933,18 @@ $af4441dd29af05df$var$grameneFilters.reactGrameneFilters = (0, $gXNCa$reduxbundl
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  ]
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  };
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  if (queryObject.hasOwnProperty("idList")) return $af4441dd29af05df$var$handleIdList(queryObject);
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+ if (queryObject.hasOwnProperty("fq_field") && queryObject.hasOwnProperty("fq_value") && queryObject.hasOwnProperty("category") && queryObject.hasOwnProperty("name")) return {
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+ type: "BATCH_ACTIONS",
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+ actions: [
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+ {
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+ type: "GRAMENE_SEARCH_CLEARED"
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+ },
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+ {
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+ type: "GRAMENE_FILTER_ADDED",
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+ payload: queryObject
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+ }
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+ ]
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+ };
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  const url = new URL(myUrl.href);
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  if (url.pathname === "/genes") return {
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  type: "GRAMENE_FILTERS_CLEARED"
@@ -1766,10 +1778,7 @@ const $5c2c79352d3d7b81$export$b2e089eb3692b073 = (props)=>/*#__PURE__*/ (0, $gX
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  });
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-
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-
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-
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- function $64fad37f770d2bfe$var$suggestionToFilters(suggestion) {
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+ const $047461923b1badda$export$964d88edb00bbcaa = (suggestion)=>{
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  return {
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  status: "init",
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  rows: 20,
@@ -1790,7 +1799,12 @@ function $64fad37f770d2bfe$var$suggestionToFilters(suggestion) {
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  }
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  ]
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  };
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- }
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+ };
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+
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+
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+
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+
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+
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  class $64fad37f770d2bfe$var$Homology extends (0, ($parcel$interopDefault($gXNCa$react))).Component {
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  constructor(props){
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  super(props);
@@ -1815,7 +1829,7 @@ class $64fad37f770d2bfe$var$Homology extends (0, ($parcel$interopDefault($gXNCa$
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  });
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  }
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  filterAllHomologs() {
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- this.props.doReplaceGrameneFilters($64fad37f770d2bfe$var$suggestionToFilters({
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+ this.props.doReplaceGrameneFilters((0, $047461923b1badda$export$964d88edb00bbcaa)({
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  category: "Gene Tree",
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  fq_field: "gene_tree",
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  fq_value: this.tree._id,
@@ -1823,7 +1837,7 @@ class $64fad37f770d2bfe$var$Homology extends (0, ($parcel$interopDefault($gXNCa$
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  }));
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  }
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  filterOrthologs() {
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- this.props.doReplaceGrameneFilters($64fad37f770d2bfe$var$suggestionToFilters({
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+ this.props.doReplaceGrameneFilters((0, $047461923b1badda$export$964d88edb00bbcaa)({
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  category: "Gene Tree",
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  fq_field: "homology__all_orthologs",
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  fq_value: this.gene._id,
@@ -1831,7 +1845,7 @@ class $64fad37f770d2bfe$var$Homology extends (0, ($parcel$interopDefault($gXNCa$
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  }));
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  }
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  filterParalogs() {
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- this.props.doReplaceGrameneFilters($64fad37f770d2bfe$var$suggestionToFilters({
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+ this.props.doReplaceGrameneFilters((0, $047461923b1badda$export$964d88edb00bbcaa)({
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  category: "Gene Tree",
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  fq_field: "homology__within_species_paralog",
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  fq_value: this.gene._id,
@@ -2866,6 +2880,7 @@ var $830f925242a0b007$export$2e2bcd8739ae039 = $830f925242a0b007$var$Publication
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+
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  let $6c5c4f90059875bf$var$external = /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("small", {
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  title: "This link opens a page from an external site",
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  children: [
@@ -2911,19 +2926,28 @@ function $6c5c4f90059875bf$var$trimSummary(summary) {
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  children: summary
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  });
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  }
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- const $6c5c4f90059875bf$var$ClosestOrtholog = ({ gene: gene })=>{
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- let name, desc, species;
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+ const $6c5c4f90059875bf$var$ClosestOrthologCmp = (props)=>{
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+ let id, name, desc, species;
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+ const gene = props.gene;
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  if (gene.model_rep_id) {
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  name = gene.model_rep_name || gene.model_rep_id;
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  desc = gene.model_rep_description;
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  species = gene.model_rep_species_name;
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+ id = gene.model_rep_id;
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  } else if (gene.closest_rep_id) {
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  name = gene.closest_rep_name || gene.closest_rep_id;
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  desc = gene.closest_rep_description;
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  species = gene.closest_rep_species_name;
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+ id = gene.closest_rep_id;
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  }
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  return /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("div", {
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  className: "closest-ortholog",
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+ onClick: props.doReplaceGrameneFilters((0, $047461923b1badda$export$964d88edb00bbcaa)({
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+ category: "Gene",
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+ fq_field: "id",
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+ fq_value: id,
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+ name: name
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+ })),
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  children: [
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  /*#__PURE__*/ (0, $gXNCa$reactjsxruntime.jsxs)("h4", {
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  children: [
@@ -2946,6 +2970,7 @@ const $6c5c4f90059875bf$var$ClosestOrtholog = ({ gene: gene })=>{
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  ]
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  });
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  };
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+ const $6c5c4f90059875bf$var$ClosestOrtholog = (0, $gXNCa$reduxbundlerreact.connect)("doReplaceGrameneFilters", $6c5c4f90059875bf$var$ClosestOrthologCmp);
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  function $6c5c4f90059875bf$var$renderClosestOrtholog(gene) {
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  if ($6c5c4f90059875bf$var$shouldShowClosestOrtholog(gene)) // we used to not add the closest ortholog to the DOM if the homology detail was visible.
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  // however, that could cause the height of the result to change. Instead we set visibility:hidden