gps-global-types 1.0.31 → 1.0.33

package/dist/cluster.types.d.ts

@@ -8,4 +8,3 @@ export declare const ClusterFields: {
     minimumPatientCount: NumberConstructor;
     distances: MapConstructor;
 };
-//# sourceMappingURL=cluster.types.d.ts.map

package/dist/cluster.types.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"cluster.types.d.ts","sourceRoot":"","sources":["cluster.types.tsx"],"names":[],"mappings":"AAAA,eAAO,MAAM,aAAa;;;;;;;;;CAWzB,CAAA"}
+{"version":3,"file":"cluster.types.d.ts","sourceRoot":"","sources":["../src/cluster.types.tsx"],"names":[],"mappings":"AAAA,eAAO,MAAM,aAAa;;;;;;;;;CAWzB,CAAA"}

package/dist/{cluster.types.tsx → cluster.types.js}

@@ -1,4 +1,7 @@
-export const ClusterFields = {
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.ClusterFields = void 0;
+exports.ClusterFields = {
     // '_id': ObjectId,
     'threshold': Number,
     'scheme': String,
@@ -9,6 +12,5 @@ export const ClusterFields = {
     'minimumPatientCount': Number,
     // 'isolates': [clusterIsoSchema], //array of ClusterIsolates
     'distances': Map,
-}
-
-// module.exports = {ClusterFields}
+};
+// module.exports = {ClusterFields}

package/dist/cluster.types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"cluster.types.js","sourceRoot":"","sources":["../src/cluster.types.tsx"],"names":[],"mappings":";;;AAAa,QAAA,aAAa,GAAG;IACzB,mBAAmB;IACnB,WAAW,EAAE,MAAM;IACnB,QAAQ,EAAE,MAAM;IAChB,iBAAiB,EAAE,MAAM;IACzB,UAAU,EAAE,OAAO;IACnB,aAAa,EAAE,IAAI;IACnB,cAAc,EAAE,IAAI;IACpB,qBAAqB,EAAE,MAAM;IAC7B,6DAA6D;IAC7D,WAAW,EAAE,GAAG;CACnB,CAAA;AAED,mCAAmC"}

package/dist/global.types.d.ts

@@ -12,4 +12,3 @@ export type armordPatientId = RegexMatchedString<'M\d+'>;
 export type Hex = RegexMatchedString<'#\d{6}'>;
 export type Rgb = RegexMatchedString<'rgb\([1-256],[1-256],[1-256]\)'>;
 export type Color = Hex | Rgb | string;
-//# sourceMappingURL=global.types.d.ts.map

package/dist/global.types.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"global.types.d.ts","sourceRoot":"","sources":["global.types.tsx"],"names":[],"mappings":"AAAA,MAAM,MAAM,gBAAgB,GAAG;IAC7B,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,CAAC;CACvB,CAAC;AAEF,MAAM,MAAM,kBAAkB,CAAC,OAAO,SAAS,MAAM,IACnD,GAAG,MAAM,GAAG;IAAE,OAAO,EAAE,OAAO,CAAA;CAAE,EAAE,CAAC;AAIrC,MAAM,MAAM,qBAAqB,GAAG,MAAM,CAAA;AAC1C,MAAM,MAAM,QAAQ,GAAG,kBAAkB,CAAC,iBAAiB,CAAC,CAAA;AAC5D,MAAM,MAAM,YAAY,GAAG,MAAM,CAAA;AACjC,MAAM,MAAM,MAAM,GAAG,MAAM,CAAA;AAC3B,MAAM,MAAM,eAAe,GAAG,kBAAkB,CAAC,MAAM,CAAC,CAAA;AACxD,MAAM,MAAM,GAAG,GAAG,kBAAkB,CAAC,QAAQ,CAAC,CAAA;AAC9C,MAAM,MAAM,GAAG,GAAG,kBAAkB,CAAC,gCAAgC,CAAC,CAAA;AACtE,MAAM,MAAM,KAAK,GAAG,GAAG,GAAG,GAAG,GAAG,MAAM,CAAA"}
+{"version":3,"file":"global.types.d.ts","sourceRoot":"","sources":["../src/global.types.tsx"],"names":[],"mappings":"AAAA,MAAM,MAAM,gBAAgB,GAAG;IAC7B,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,CAAC;CACvB,CAAC;AAEF,MAAM,MAAM,kBAAkB,CAAC,OAAO,SAAS,MAAM,IACnD,GAAG,MAAM,GAAG;IAAE,OAAO,EAAE,OAAO,CAAA;CAAE,EAAE,CAAC;AAIrC,MAAM,MAAM,qBAAqB,GAAG,MAAM,CAAA;AAC1C,MAAM,MAAM,QAAQ,GAAG,kBAAkB,CAAC,iBAAiB,CAAC,CAAA;AAC5D,MAAM,MAAM,YAAY,GAAG,MAAM,CAAA;AACjC,MAAM,MAAM,MAAM,GAAG,MAAM,CAAA;AAC3B,MAAM,MAAM,eAAe,GAAG,kBAAkB,CAAC,MAAM,CAAC,CAAA;AACxD,MAAM,MAAM,GAAG,GAAG,kBAAkB,CAAC,QAAQ,CAAC,CAAA;AAC9C,MAAM,MAAM,GAAG,GAAG,kBAAkB,CAAC,gCAAgC,CAAC,CAAA;AACtE,MAAM,MAAM,KAAK,GAAG,GAAG,GAAG,GAAG,GAAG,MAAM,CAAA"}

package/dist/global.types.js

@@ -0,0 +1,2 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });

package/dist/global.types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"global.types.js","sourceRoot":"","sources":["../src/global.types.tsx"],"names":[],"mappings":""}

package/dist/index.d.ts

@@ -1,6 +1,6 @@
-export * from './global.types.tsx';
-export * from './link.types.tsx';
-export * from './mst.types.tsx';
-export * from './pie.types.tsx';
-export * from './isolate.types.tsx';
-//# sourceMappingURL=index.d.ts.map
+export * from './global.types';
+export * from './link.types';
+export * from './mst.types';
+export * from './pie.types';
+export * from './isolate.types';
+export * from './cluster.types';

package/dist/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["index.tsx"],"names":[],"mappings":"AAAA,cAAc,oBAAoB,CAAA;AAClC,cAAc,kBAAkB,CAAA;AAChC,cAAc,iBAAiB,CAAA;AAC/B,cAAc,iBAAiB,CAAA;AAC/B,cAAc,qBAAqB,CAAA"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.tsx"],"names":[],"mappings":"AAAA,cAAc,gBAAgB,CAAA;AAC9B,cAAc,cAAc,CAAA;AAC5B,cAAc,aAAa,CAAA;AAC3B,cAAc,aAAa,CAAA;AAC3B,cAAc,iBAAiB,CAAA"}

package/dist/index.js

@@ -0,0 +1,22 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __exportStar = (this && this.__exportStar) || function(m, exports) {
+    for (var p in m) if (p !== "default" && !Object.prototype.hasOwnProperty.call(exports, p)) __createBinding(exports, m, p);
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+__exportStar(require("./global.types"), exports);
+__exportStar(require("./link.types"), exports);
+__exportStar(require("./mst.types"), exports);
+__exportStar(require("./pie.types"), exports);
+__exportStar(require("./isolate.types"), exports);
+__exportStar(require("./cluster.types"), exports);

package/dist/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;AAAA,iDAA8B;AAC9B,+CAA4B;AAC5B,8CAA2B;AAC3B,8CAA2B;AAC3B,kDAA+B"}

package/dist/isolate.types.d.ts

@@ -127,4 +127,3 @@ export declare const IsolateFields: {
     mrsnSuperFamily: StringConstructor;
     expectedPhenotype: StringConstructor;
 };
-//# sourceMappingURL=isolate.types.d.ts.map

package/dist/isolate.types.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"isolate.types.d.ts","sourceRoot":"","sources":["isolate.types.tsx"],"names":[],"mappings":"AAAA,eAAO,MAAM,UAAU;;;;;;;;;;;;;;CAetB,CAAA;AAGD,eAAO,MAAM,aAAa;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CAmHzB,CAAA"}
+{"version":3,"file":"isolate.types.d.ts","sourceRoot":"","sources":["../src/isolate.types.tsx"],"names":[],"mappings":"AAAA,eAAO,MAAM,UAAU;;;;;;;;;;;;;;CAetB,CAAA;AAGD,eAAO,MAAM,aAAa;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CAmHzB,CAAA"}

package/dist/{isolate.types.tsx → isolate.types.js}

@@ -1,4 +1,7 @@
-export const KlebFields = {
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.IsolateFields = exports.KlebFields = void 0;
+exports.KlebFields = {
     'Yersiniabactin': String,
     'Colibactin': String,
     'Aerobactin': String,
@@ -12,12 +15,9 @@ export const KlebFields = {
     "Omp_mutations": String,
     "Col_mutations": String,
     "Flq_mutations": String,
-
-}
-
-
-export const IsolateFields = {
-    "_id":String,
+};
+exports.IsolateFields = {
+    "_id": String,
     "mrsnId": String,
     "qcCallFinal": String,
     "rawOrganismId": String,
@@ -74,7 +74,7 @@ export const IsolateFields = {
     "armordPatientId": String,
     "armordRawOrganismId": String,
     "armordUnit": String,
-    "submittedOrganismId": String, 
+    "submittedOrganismId": String,
     "isManuallyEntered": Boolean,
     "sampleType": String,
     "qcPoc": String,
@@ -131,4 +131,4 @@ export const IsolateFields = {
     "mrsnSuperFamily": String,
     "expectedPhenotype": String,
     // "kleborate": [KlebSchema]
-}
+};

package/dist/isolate.types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"isolate.types.js","sourceRoot":"","sources":["../src/isolate.types.tsx"],"names":[],"mappings":";;;AAAa,QAAA,UAAU,GAAG;IACtB,gBAAgB,EAAE,MAAM;IACxB,YAAY,EAAE,MAAM;IACpB,YAAY,EAAE,MAAM;IACpB,aAAa,EAAE,MAAM;IACrB,QAAQ,EAAE,MAAM;IAChB,OAAO,EAAE,MAAM;IACf,SAAS,EAAE,MAAM;IACjB,SAAS,EAAE,MAAM;IACjB,QAAQ,EAAE,MAAM;IAChB,eAAe,EAAE,MAAM;IACvB,eAAe,EAAE,MAAM;IACvB,eAAe,EAAE,MAAM;IACvB,eAAe,EAAE,MAAM;CAE1B,CAAA;AAGY,QAAA,aAAa,GAAG;IACzB,KAAK,EAAC,MAAM;IACZ,QAAQ,EAAE,MAAM;IAChB,aAAa,EAAE,MAAM;IACrB,eAAe,EAAE,MAAM;IACvB,OAAO,EAAE,MAAM;IACf,SAAS,EAAE,MAAM;IACjB,OAAO,EAAE,MAAM;IACf,SAAS,EAAE,MAAM;IACjB,aAAa,EAAE,MAAM;IACrB,SAAS,EAAE,MAAM;IACjB,gBAAgB,EAAE,OAAO;IACzB,UAAU,EAAE,KAAK;IACjB,cAAc,EAAE,MAAM;IACtB,eAAe,EAAE,MAAM;IACvB,oBAAoB,EAAE,MAAM;IAC5B,kCAAkC,EAAE,MAAM;IAC1C,uCAAuC,EAAE,MAAM;IAC/C,uCAAuC,EAAE,MAAM;IAC/C,4CAA4C,EAAE,MAAM;IACpD,qBAAqB,EAAE,MAAM;IAC7B,+BAA+B,EAAE,MAAM;IACvC,0BAA0B,EAAE,MAAM;IAClC,kBAAkB,EAAE,MAAM;IAC1B,WAAW,EAAE,MAAM;IACnB,gBAAgB,EAAE,MAAM;IACxB,QAAQ,EAAE,MAAM;IAChB,MAAM,EAAE,MAAM;IACd,OAAO,EAAE,MAAM;IACf,OAAO,EAAE,MAAM;IACf,OAAO,EAAE,MAAM;IACf,OAAO,EAAE,MAAM;IACf,OAAO,EAAE,MAAM;IACf,OAAO,EAAE,MAAM;IACf,OAAO,EAAE,MAAM;IACf,OAAO,EAAE,MAAM;IACf,YAAY,EAAE,MAAM;IACpB,iBAAiB,EAAE,MAAM;IACzB,YAAY,EAAE,MAAM;IACpB,mBAAmB,EAAE,IAAI;IACzB,UAAU,EAAE,MAAM;IAClB,sBAAsB,EAAE,OAAO;IAC/B,iBAAiB,EAAE,MAAM;IACzB,yCAAyC,EAAE,MAAM;IACjD,KAAK,EAAE,KAAK;IACZ,uBAAuB,EAAE,MAAM;IAC/B,WAAW,EAAE,MAAM;IACnB,mBAAmB,EAAE,IAAI;IACzB,mBAAmB,EAAE,MAAM;IAC3B,gBAAgB,EAAE,MAAM;IACxB,oBAAoB,EAAE,MAAM;IAC5B,YAAY,EAAE,MAAM;IACpB,qBAAqB,EAAE,MAAM;IAC7B,mBAAmB,EAAE,MAAM;IAC3B,cAAc,EAAE,MAAM;IACtB,iBAAiB,EAAE,MAAM;IACzB,qBAAqB,EAAE,MAAM;IAC7B,YAAY,EAAE,MAAM;IACpB,qBAAqB,EAAE,MAAM;IAC7B,mBAAmB,EAAE,OAAO;IAC5B,YAAY,EAAE,MAAM;IACpB,OAAO,EAAE,MAAM;IACf,YAAY,EAAE,MAAM;IACpB,cAAc,EAAE,MAAM;IACtB,cAAc,EAAE,MAAM;IACtB,gBAAgB,EAAE,MAAM;IACxB,QAAQ,EAAE,MAAM;IAChB,QAAQ,EAAE,MAAM;IAChB,eAAe,EAAE,MAAM;IACvB,mBAAmB,EAAE,MAAM;IAC3B,aAAa,EAAE,MAAM;IACrB,0BAA0B,EAAE,MAAM;IAClC,eAAe,EAAE,MAAM;IACvB,mBAAmB,EAAE,MAAM;IAC3B,aAAa,EAAE,MAAM;IACrB,0BAA0B,EAAE,MAAM;IAClC,cAAc,EAAE,MAAM;IACtB,YAAY,EAAE,MAAM;IACpB,YAAY,EAAE,MAAM;IACpB,oBAAoB,EAAE,MAAM;IAC5B,sBAAsB,EAAE,MAAM;IAC9B,oBAAoB,EAAE,MAAM;IAC5B,sBAAsB,EAAE,MAAM;IAC9B,oBAAoB,EAAE,MAAM;IAC5B,sBAAsB,EAAE,MAAM;IAC9B,oBAAoB,EAAE,MAAM;IAC5B,sBAAsB,EAAE,MAAM;IAC9B,wBAAwB,EAAE,MAAM;IAChC,0BAA0B,EAAE,MAAM;IAClC,wBAAwB,EAAE,MAAM;IAChC,0BAA0B,EAAE,MAAM;IAClC,kBAAkB,EAAE,MAAM;IAC1B,oBAAoB,EAAE,MAAM;IAC5B,kBAAkB,EAAE,MAAM;IAC1B,oBAAoB,EAAE,MAAM;IAC5B,YAAY,EAAE,MAAM;IACpB,cAAc,EAAE,MAAM;IACtB,kBAAkB,EAAE,MAAM;IAC1B,iBAAiB,EAAE,OAAO;IAC1B,iBAAiB,EAAE,MAAM;IACzB,QAAQ,EAAE,MAAM;IAChB,aAAa,EAAE,MAAM;IACrB,oBAAoB,EAAE,MAAM;IAC5B,qBAAqB,EAAE,IAAI;IAC3B,kBAAkB,EAAE,OAAO;IAC3B,UAAU,EAAE,MAAM;IAClB,YAAY,EAAE,IAAI;IAClB,oEAAoE;IACpE,MAAM,EAAE,MAAM;IACd,QAAQ,EAAE,MAAM;IAChB,SAAS,EAAE,KAAK;IAChB,aAAa,EAAE,KAAK;IACpB,iBAAiB,EAAE,MAAM;IACzB,mBAAmB,EAAE,MAAM;IAC3B,4BAA4B;CAC/B,CAAA"}

package/dist/link.types.d.ts

@@ -1,8 +1,7 @@
 import { SimulationLinkDatum } from 'd3';
-import { NodeType } from './pie.types.tsx';
+import { NodeType } from './pie.types';
 export interface EdgeType extends SimulationLinkDatum<NodeType> {
     source: NodeType;
     target: NodeType;
     value: number;
 }
-//# sourceMappingURL=link.types.d.ts.map

package/dist/link.types.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"link.types.d.ts","sourceRoot":"","sources":["link.types.tsx"],"names":[],"mappings":"AAAA,OAAO,EAAE,mBAAmB,EAAE,MAAM,IAAI,CAAC;AACzC,OAAO,EAAE,QAAQ,EAAE,MAAM,iBAAiB,CAAC;AAE3C,MAAM,WAAW,QAAS,SAAQ,mBAAmB,CAAC,QAAQ,CAAC;IAC3D,MAAM,EAAE,QAAQ,CAAA;IAChB,MAAM,EAAE,QAAQ,CAAA;IAChB,KAAK,EAAE,MAAM,CAAA;CAChB"}
+{"version":3,"file":"link.types.d.ts","sourceRoot":"","sources":["../src/link.types.tsx"],"names":[],"mappings":"AAAA,OAAO,EAAE,mBAAmB,EAAE,MAAM,IAAI,CAAC;AACzC,OAAO,EAAE,QAAQ,EAAE,MAAM,aAAa,CAAC;AAEvC,MAAM,WAAW,QAAS,SAAQ,mBAAmB,CAAC,QAAQ,CAAC;IAC3D,MAAM,EAAE,QAAQ,CAAA;IAChB,MAAM,EAAE,QAAQ,CAAA;IAChB,KAAK,EAAE,MAAM,CAAA;CAChB"}

package/dist/link.types.js

@@ -0,0 +1,2 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });

package/dist/link.types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"link.types.js","sourceRoot":"","sources":["../src/link.types.tsx"],"names":[],"mappings":""}

package/dist/mst.types.d.ts

@@ -1,7 +1,7 @@
-import { ClusterFields } from "./cluster.types.tsx";
-import { Color, ObjectId } from "./global.types.tsx";
-import { IsolateFields } from "./isolate.types.tsx";
-import { EdgeType } from "./link.types.tsx";
+import { ClusterFields } from "./cluster.types";
+import { Color, ObjectId } from "./global.types";
+import { IsolateFields } from "./isolate.types";
+import { EdgeType } from "./link.types";
 export interface mstGlobalTypes {
     charge: number;
     radius: number;
@@ -102,4 +102,3 @@ export interface getAClusterBody {
     snapshotData?: SnapshotType;
 }
 export {};
-//# sourceMappingURL=mst.types.d.ts.map

package/dist/mst.types.d.ts.map

@@ -1 +1 @@
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package/dist/mst.types.js

@@ -0,0 +1,6 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.labelFields = exports.dateFields = exports.colorFields = void 0;
+exports.colorFields = ['armordPatientId', 'mlst', 'sampleType', 'armordFacility', 'country', 'custom color']; //no :string[] ! removes 'const'
+exports.dateFields = ['armordCultureDate', 'month', 'quarter', 'year'];
+exports.labelFields = ['armordMrsnIdLBL', 'mrsnIdLBL', 'armordAccessionNumberLBL', 'armordPatientIdLBL', 'custom label'];

package/dist/mst.types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"mst.types.js","sourceRoot":"","sources":["../src/mst.types.tsx"],"names":[],"mappings":";;;AAwBa,QAAA,WAAW,GAAG,CAAC,iBAAiB,EAAE,MAAM,EAAE,YAAY,EAAE,gBAAgB,EAAE,SAAS,EAAE,cAAc,CAAU,CAAC,CAAC,gCAAgC;AAC/I,QAAA,UAAU,GAAG,CAAC,mBAAmB,EAAE,OAAO,EAAE,SAAS,EAAE,MAAM,CAAU,CAAC;AACxE,QAAA,WAAW,GAAG,CAAC,iBAAiB,EAAE,WAAW,EAAE,0BAA0B,EAAE,oBAAoB,EAAE,cAAc,CAAU,CAAC"}

package/dist/pie.types.d.ts

@@ -1,6 +1,6 @@
 import { BaseType, Selection, SimulationNodeDatum } from "d3";
-import { ObjectId, Color, RegexMatchedString, mrsnId } from "./global.types.tsx";
-import { colorKey, dateKey, labelKey } from "./mst.types.tsx";
+import { ObjectId, Color, RegexMatchedString, mrsnId } from "./global.types";
+import { colorKey, dateKey, labelKey } from "./mst.types";
 export interface ColorField {
     color: string;
     value: number;
@@ -66,4 +66,3 @@ export type PreNodeInterface = ExcludeB4A<ExtraNodeTypeFields> & {
     beforeAndAfter: any;
 };
 export {};
-//# sourceMappingURL=pie.types.d.ts.map

package/dist/pie.types.d.ts.map

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package/dist/pie.types.js

@@ -0,0 +1,2 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });

package/dist/pie.types.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"pie.types.js","sourceRoot":"","sources":["../src/pie.types.tsx"],"names":[],"mappings":""}

package/package.json

@@ -1,8 +1,9 @@
 {
   "name": "gps-global-types",
-  "version": "1.0.31",
+  "version": "1.0.33",
   "description": "types shared between front-end and back-end",
-  "main": "dist/index.tsx",
+  "main": "dist/index.js",
+  "types": "dist/index.d.ts",
   "files": [
     "dist"
   ],

package/dist/global.types.tsx

@@ -1,18 +0,0 @@
-export type StringDictionary = {
-  [key: string]: string;
-};
-
-export type RegexMatchedString<Pattern extends string> =
-  `${string & { __brand: Pattern }}`;
-//TYPES OF STRINGS
-
-
-export type armordAccessionNumber = string // who KNOWS the format of these 
-export type ObjectId = RegexMatchedString<'[a-zA-Z0-9]{12}'> //12 byte string meant to index mongo docs
-export type armordMrsnId = string  //  6 o/*  */r 7 digit number typically, but the bi-db is a cesspool
-export type mrsnId = string  // ###### ('MRSN' + 6 or 7 digit number) typically, but the bi-db is a cesspool
-export type armordPatientId = RegexMatchedString<'M\d+'>  // M###### ('M'+6 digit number), but the bi-db is a cesspool
-export type Hex = RegexMatchedString<'#\d{6}'>  // 6 digit String hexadecimal w/ '#' prepended
-export type Rgb = RegexMatchedString<'rgb\([1-256],[1-256],[1-256]\)'>  // format rgb(\d[1-256],\d[1-256],\d[1-256])
-export type Color = Hex | Rgb | string
-

package/dist/index.tsx

@@ -1,5 +0,0 @@
-export * from './global.types.tsx'
-export * from './link.types.tsx'
-export * from './mst.types.tsx'
-export * from './pie.types.tsx'
-export * from './isolate.types.tsx'

package/dist/link.types.tsx

@@ -1,9 +0,0 @@
-import { SimulationLinkDatum } from 'd3';
-import { NodeType } from './pie.types.tsx';
-
-export interface EdgeType extends SimulationLinkDatum<NodeType> { // extends SimulationLinkDatum<NodeType>} anything not defined here was added by d3 (or i fucked up)
-    source: NodeType // node _id edge to
-    target: NodeType // node _id edge from
-    value: number // distance between source and target
-}
-

package/dist/mst.types.tsx

@@ -1,169 +0,0 @@
-import { ClusterFields } from "./cluster.types.tsx";
-import { armordAccessionNumber, Color, mrsnId, ObjectId } from "./global.types.tsx";
-import { IsolateFields } from "./isolate.types.tsx";
-import { EdgeType } from "./link.types.tsx";
-
-export interface mstGlobalTypes {
-    //form values
-    charge: number, //= -100, // repulsion
-    radius: number, //= 15, // user adjustment of node radius
-    cluster: number, //= 0, // less than highlight threshold for links
-    distance: number //= 
-    linkLabelSize: number, //= 12, // fontSize of link labels
-    center: [number, number,]//[800,500],// where on the page does the tree spawn (x,y )
-    fuzzyThreshold: number, //= 0, // nodes outside of requested list that are x alleles away from the original mst
-    neighbor: number, //= 1, // how many isolate neighbors to return (minimum) 
-    slim?: boolean, //false //are the node labels collapsed or expanded?
-
-    //interactive nodes
-     checkedNodes:ObjectId[],   
-     highlightedNodes:ObjectId[],
-     graph?:MSTGraph
-
-}
-
-export const colorFields = ['armordPatientId', 'mlst', 'sampleType', 'armordFacility', 'country', 'custom color'] as const; //no :string[] ! removes 'const'
-export const dateFields = ['armordCultureDate', 'month', 'quarter', 'year'] as const;
-export const labelFields = ['armordMrsnIdLBL', 'mrsnIdLBL', 'armordAccessionNumberLBL', 'armordPatientIdLBL', 'custom label'] as const;
-
-export type colorKey = typeof colorFields[number];
-export type dateKey = typeof dateFields[number];
-export type labelKey = typeof labelFields[number];
-
-
-
-
-
-
-type CustomDictEntry = Partial<Record<colorKey & dateKey, Color>> | Partial<Record<labelKey, string>>;
-export type CustomDict = Record<ObjectId, CustomDictEntry>
-
-
-export interface LatestNodes { armordCultureDate: Date | string, isos: any[], _id: ObjectId[] }
-export interface MSTGraph {
-    name?:string,
-    colorCalendar:Partial<Record<dateKey, Record<string, Color>>> //correctly color nodes based on dates
-    snapshotData?:SnapshotType
-    nodes: any //todo:temp//NodeType[] // core parameter of d3tree.js . keeps all isolates collection data
-    links: EdgeType[] // core parameter of d3tree.js
-    latest: LatestNodes // earliest node for easy toggling
-    custom: CustomDict // . I KNOW THIS IS DUMB but from user's pov it results in seamless color transitions across pages
-    legend: MSTLegend // saves legend configs across all color fields
-    missing:Record<string,any>[]  //todo: isolate.types. global 
-}interface FlashTable {
-    "_id": ObjectId,
-    "MRSN ID¹": mrsnId,
-    "Cx Date": Date | string,
-    "Cx Source": string,
-    "Wards": string,
-    "Prev Report #²": string,
-    "Accession #": armordAccessionNumber,
-    "Last Name": "...",
-    "DOD ID": "..."
-}
-
-interface FlashData { //todo: add 'tier1s' here
-    dateCreated: Date,
-    first: boolean, //first node added to thec cluster
-    isolateCount: number,
-    lastModified: Date,
-    mostRecent: {
-        _id: ObjectId[],
-        armordCultureDate: Date | string,
-        isos: Record<string, any>[], //todo
-    }
-    mostCloselyRelated: {
-        _id: ObjectId,
-        armordCultureDate: Date | string,
-        distance: number
-    },
-    patientCount: number,
-    st: string,
-    table: FlashTable[],
-    wardCount: string,
-    wgsId: string
-}
-
-
-interface MSTResult {
-    flash: FlashData,
-    graph: MSTGraph,
-    tabular: {
-        isolate: Record<string, any>[],
-        amr: Record<string, any>[]
-    }
-}
-
-export interface LegendBullet { //or custom upload data
-    color: Color,
-    label: string
-}
-
-export type MSTLegend = Partial<Record<colorKey|'beforeAndAfter'|'custom color', LegendBullet[]>> & Partial<Record<dateKey, 'date'>>;
-// & { 'beforeAndAfter': [{ color: '#666666', label: 'Before ' }, { color: '#4a64aa', label: 'After ' }] }
-
-
-
-export interface SnapshotType {
-    _id: ObjectId,
-    form: mstGlobalTypes,
-    legend: LegendBullet[],
-    nodes: Record<ObjectId, LegendBullet>,
-    scheme: string,
-    transforms: Record<ObjectId, { x: number, y: number }>
-}
-/** /mst route RESULT
-
-/**
- * @typedef D3treeProps
- * @property {MSTGraph} data except it only requires links,nodes,legend, and custom
- * @property {ForceObject} form
- * @property {String|null} _id cluster _id
- * @property {function(Snapshot)} setSnapshot
- * @property {function(MSTGraph)} setData trigger parent data state which affects variables in parent
- * @property {function([[import('../../typedefs/MSTree').mrsnId[],Boolean ]])} setSelected connects nodes to table rows on click
- */
-/**force
- * @typedef d3Data
- * @property {EdgeType[]} links
- * @property {NodeType[]} pies
- */
-/**string
- * @typedef ItolProps
- * @property {string} scheme
- * @property {ObjectId[]} isolates targets centered for analysis
- * @property {int} neighbors min # of nearest samples to include (beyond targets)
- * @property {int} threshold max allelic distance from the targets to include
- */
-//IDK WHY THESE EXIST
-/**
- * @typedef MstFields
- * @property {String[]} clusterNickName
- * @property {String[]} scheme
- * @property {Date} lastModified
- * @property {Date} dateModified
- *
- *
- *
- *
- *
- *
-* @typedef {{...SplashReq,...MstFields}} MSTreeReq
-     *
-*/
-// module.exports = { MSTGraph, MSTLegend, NodeType,EdgeType,Hex, ColorField,LabelField}
-// exports.unused = {};
-
-export type QueryFields = keyof typeof IsolateFields | 'cluster' | `cluster.${keyof typeof ClusterFields}` | keyof typeof ClusterFields
-
-
-export interface getAClusterBody {
-    //theres 4 ways of calling this function
-    //1. through a BAQ involving iso and/or cluster fields
-    query?:Partial<Record< QueryFields, Object>>,
-    // clusterQuery?:Partial<Record<keyof typeof ClusterFields, Object>>, //2. selecting a cluster on /clusters (sending cluster _id)
-    fuzzy?:number, //3. by recalculating a previous query
-    neighbors?:number, // (fuzzy and neighbors are only available on recalc)
-    snapshotData?:SnapshotType //4. uploading a snapshot. (should i extrapolate ),
-
-  }

package/dist/pie.types.tsx

@@ -1,78 +0,0 @@
-import { BaseType, Selection, SimulationNodeDatum } from "d3";
-import { ObjectId, Color, RegexMatchedString, mrsnId } from "./global.types.tsx"
-import  { colorKey, dateKey, labelKey } from "./mst.types.tsx"
-
-export interface ColorField {//TYPES OF GRAPH FIELDS ColorField datefields become colorFields but require additional processing  
-    color: string, //  unique hex or rgb  of parameter 
-    value: number, //  count of how many times value will be represented in the pie
-    latest?: string // most recent node designation; diff coloring logic for 'latest' nodes
-}
-
-export type LabelField = string; //if n>1, seperated by '&' which are interpreted as newlines in front-end. var names ends with 'LBL'.
-export interface ColorType {
-    color: Color, //unique hex of parameter
-    value: number //count of how many times value will be represented in the pie,
-    latest?:'latest' //represents if slice belongs to the latest node
-}
-export type LabelType = RegexMatchedString<'(\w&)*'> // if many, seperated by '&' qhich are interpreted as newlines in front-end. var names ends with 'LBL'.
-type DateType = string | Date;  // must be able to be interpreted as date type by Date js object
-
-
-export interface ExtraNodeTypeFields extends SimulationNodeDatum {
-    id: ObjectId,//unique identifier referenced by Graph.links and d3 Force. String but it's a string of a mongo id
-    beforeAndAfter?: ColorType[], //[=[{color:'#fff',value:1}]] so it doesnt break on recalculation
-    dateArr: DateType[], // array of armordCultureDates used for beforeAndAfter coloring
-    hover?: string, // [=""] //unique fieldfields \/ \/ list seperated by ', ' (only tier1 alleles for now)
-    nodeids: ObjectId[] // for selection logic between table and node=
-    mrsnIds:mrsnId[],
-    x?: number,
-    y?: number,
-    fx?: number | null,
-    fy?: number | null,
-}
-
-export type NodeType = ExtraNodeTypeFields & {
-    [K in colorKey | dateKey]: ColorType[];
-} & {
-    [K in labelKey]: LabelType[];
-}; //d3.Selection<SVGGElement, NodeType, d3.BaseType, unknown>
-export type ParentSelection = Selection<SVGGElement, NodeType, BaseType, unknown>
-export type PieSelection = Selection<SVGCircleElement, NodeType, BaseType, NodeType[]>
-export type PieTextSelection = Selection<SVGTextElement, NodeType, SVGGElement, NodeType>
-export interface PieType {
-    g: ParentSelection,
-    data: NodeType[],
-    labelField: keyof NodeType, //todo acceptable strings!
-}
-export interface SelectionObj {
-    mrsnIds: string[],
-    active: boolean
-}
-// export interface InitializeDragProps {
-//     sticky: boolean,
-//     sim: RefObject<Simulation<SimulationNodeDatum, any>>,
-//     setSelected: Dispatch<SetStateAction<SelectionObj>>,
-//     height: number,
-//     width: number// todo can this be a global const somewhere instead?
-// }
-export interface NodeColorProps {
-    colorField: keyof NodeType,
-    svg: ParentSelection,
-    formRadius: number
-}
-
-export interface newLabelProps {
-    labelField: keyof NodeType,
-    svg: ParentSelection,
-    slim: boolean
-}
-
-type ColorCountTemp = Record<Color,number>; //| ColorType[]
-
-type ExcludeB4A<T> = Omit<T, 'beforeAndAfter'>;
-// type ExcludeB4A<T> = Omit<T, 'beforeAndAfter'>;
-export type PreNodeInterface  = ExcludeB4A<ExtraNodeTypeFields> & {
-    [K in colorKey | dateKey ]: ColorCountTemp;
-} & {
-    [K in labelKey]: LabelType;
-} & {populate :(field:colorKey|dateKey, value:Color)=> void} & {tier1: Set<string>,beforeAndAfter:any}