gosling.js 1.0.0 → 1.0.1

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@@ -6,7 +6,10 @@ import type { UrlToFetchOptions } from 'src/core/gosling-component';
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  import type { IdTable } from '../api/track-and-view-ids';
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  /** The callback function called everytime after the spec has been compiled */
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  export type CompileCallback = (hg: HiGlassSpec, size: Size, gs: GoslingSpec, tracksAndViews: VisUnitApiData[], idTable: IdTable) => void;
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- export declare function compile(spec: GoslingSpec, callback: CompileCallback, templates: TemplateTrackDef[], theme: Required<CompleteThemeDeep>, containerStatus: {
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+ /**
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+ * Process the Gosling specification, including normalization and filling in defaults.
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+ */
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+ export declare function compile(spec: GoslingSpec, callback: CompileCallback, templates?: TemplateTrackDef[], theme?: Required<CompleteThemeDeep>, containerStatus?: {
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  containerSize?: {
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  width: number;
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  height: number;
@@ -1 +1 @@
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- {"version":3,"file":"compile.d.ts","sourceRoot":"","sources":["../../../src/compiler/compile.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,WAAW,EAAE,gBAAgB,EAAE,cAAc,EAAE,MAAM,8BAA8B,CAAC;AAClG,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,8BAA8B,CAAC;AAGhE,OAAO,EAAwB,KAAK,IAAI,EAAE,MAAM,gBAAgB,CAAC;AACjE,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,qBAAqB,CAAC;AAC7D,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,4BAA4B,CAAC;AAGpE,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,2BAA2B,CAAC;AAEzD,8EAA8E;AAC9E,MAAM,MAAM,eAAe,GAAG,CAC1B,EAAE,EAAE,WAAW,EACf,IAAI,EAAE,IAAI,EACV,EAAE,EAAE,WAAW,EACf,cAAc,EAAE,cAAc,EAAE,EAChC,OAAO,EAAE,OAAO,KACf,IAAI,CAAC;AAEV,wBAAgB,OAAO,CACnB,IAAI,EAAE,WAAW,EACjB,QAAQ,EAAE,eAAe,EACzB,SAAS,EAAE,gBAAgB,EAAE,EAC7B,KAAK,EAAE,QAAQ,CAAC,iBAAiB,CAAC,EAClC,eAAe,EAAE;IACb,aAAa,CAAC,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;IAClD,mBAAmB,CAAC,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;CAC3D,EACD,iBAAiB,CAAC,EAAE,iBAAiB,QAyCxC"}
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+ {"version":3,"file":"compile.d.ts","sourceRoot":"","sources":["../../../src/compiler/compile.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,WAAW,EAAE,gBAAgB,EAAE,cAAc,EAAE,MAAM,8BAA8B,CAAC;AAClG,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,8BAA8B,CAAC;AAGhE,OAAO,EAAwB,KAAK,IAAI,EAAE,MAAM,gBAAgB,CAAC;AACjE,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,qBAAqB,CAAC;AAC7D,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,4BAA4B,CAAC;AAGpE,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,2BAA2B,CAAC;AAGzD,8EAA8E;AAC9E,MAAM,MAAM,eAAe,GAAG,CAC1B,EAAE,EAAE,WAAW,EACf,IAAI,EAAE,IAAI,EACV,EAAE,EAAE,WAAW,EACf,cAAc,EAAE,cAAc,EAAE,EAChC,OAAO,EAAE,OAAO,KACf,IAAI,CAAC;AAEV;;GAEG;AACH,wBAAgB,OAAO,CACnB,IAAI,EAAE,WAAW,EACjB,QAAQ,EAAE,eAAe,EACzB,SAAS,GAAE,gBAAgB,EAAqB,EAChD,KAAK,GAAE,QAAQ,CAAC,iBAAiB,CAAqB,EACtD,eAAe,GAAE;IACb,aAAa,CAAC,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;IAClD,mBAAmB,CAAC,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;CACtD,EACN,iBAAiB,CAAC,EAAE,iBAAiB,QAyCxC"}
@@ -2,4 +2,5 @@ export { getRelativeGenomicPosition, computeChromSizes, getChromInterval, getChr
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  export { sanitizeChrName } from './data-fetchers/utils';
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  export { convertToFlatTracks as _convertToFlatTracks } from './compiler/spec-preprocess';
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  export { spreadTracksByData as _spreadTracksByData } from './core/utils/overlay';
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+ export { compile as _compile } from './compiler/compile';
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  //# sourceMappingURL=exported-utils.d.ts.map
@@ -1 +1 @@
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- {"version":3,"file":"exported-utils.d.ts","sourceRoot":"","sources":["../../src/exported-utils.ts"],"names":[],"mappings":"AAAA,OAAO,EACH,0BAA0B,EAC1B,iBAAiB,EACjB,gBAAgB,EAChB,iBAAiB,EACjB,oBAAoB,EACvB,MAAM,uBAAuB,CAAC;AAC/B,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AAGxD,OAAO,EAAE,mBAAmB,IAAI,oBAAoB,EAAE,MAAM,4BAA4B,CAAC;AACzF,OAAO,EAAE,kBAAkB,IAAI,mBAAmB,EAAE,MAAM,sBAAsB,CAAC"}
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+ {"version":3,"file":"exported-utils.d.ts","sourceRoot":"","sources":["../../src/exported-utils.ts"],"names":[],"mappings":"AAAA,OAAO,EACH,0BAA0B,EAC1B,iBAAiB,EACjB,gBAAgB,EAChB,iBAAiB,EACjB,oBAAoB,EACvB,MAAM,uBAAuB,CAAC;AAC/B,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AAGxD,OAAO,EAAE,mBAAmB,IAAI,oBAAoB,EAAE,MAAM,4BAA4B,CAAC;AACzF,OAAO,EAAE,kBAAkB,IAAI,mBAAmB,EAAE,MAAM,sBAAsB,CAAC;AACjF,OAAO,EAAE,OAAO,IAAI,QAAQ,EAAE,MAAM,oBAAoB,CAAC"}
package/dist/utils.js CHANGED
@@ -1,4 +1,4 @@
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- import { ad, ae, c, aa, ab, N, ac, s } from "./exported-utils-51b5f19f.js";
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+ import { _, a5, a6, c, a2, a3, M, a4, s } from "./exported-utils-ce57b459.js";
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  import "d3-array";
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  import "generic-filehandle";
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  import "pixi.js";
@@ -8,13 +8,14 @@ import "d3-scale";
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  import "lodash-es";
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  import "d3-scale-chromatic";
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  export {
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- ad as _convertToFlatTracks,
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- ae as _spreadTracksByData,
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+ _ as _compile,
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+ a5 as _convertToFlatTracks,
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+ a6 as _spreadTracksByData,
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  c as computeChromSizes,
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- aa as getChromInterval,
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- ab as getChromTotalSize,
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- N as getRelativeGenomicPosition,
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- ac as parseGenomicPosition,
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+ a2 as getChromInterval,
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+ a3 as getChromTotalSize,
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+ M as getRelativeGenomicPosition,
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+ a4 as parseGenomicPosition,
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  s as sanitizeChrName
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  };
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  //# sourceMappingURL=utils.js.map
package/package.json CHANGED
@@ -1,7 +1,7 @@
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  {
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  "name": "gosling.js",
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  "author": "Sehi L'Yi",
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- "version": "1.0.0",
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+ "version": "1.0.1",
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  "license": "MIT",
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  "repository": {
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  "type": "git",
@@ -54,7 +54,7 @@
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  "generic-filehandle": "^3.0.1",
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  "higlass": "^1.13.4",
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  "higlass-register": "^0.3.0",
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- "higlass-text": "^0.1.1",
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+ "higlass-text": "^0.1.7",
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  "json-stringify-pretty-compact": "^2.0.0",
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  "jspdf": "^2.3.1",
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  "lodash-es": "^4.17.21",