gosling.js 0.15.0 → 0.16.0

package/dist/gosling.js

@@ -34,7 +34,7 @@ import "bezier-js";
 import { scaleLinear, scaleSequential, scaleOrdinal, scaleBand } from "d3-scale";
 import { sampleSize, isEqual, uniqBy, cloneDeepWith } from "lodash-es";
 import { interpolateViridis } from "d3-scale-chromatic";
-import { A as Ajv, I as IsChannelDeep, r as resolveSuperposedTracks, t as traverseTracks, a as IsTemplateTrack, g as getTextStyle, c as computeChromSizes, b as cartesianToPolar, u as uuid, R as RADIAN_GAP, v as valueToRadian, p as pointsToDegree, d as commonjsGlobal, e as RemoteFile, f as IsOneOfFilter, h as IsRangeFilter, i as IsIncludeFilter, j as getChannelKeysByAggregateFnc, k as getChannelKeysByType, s as sanitizeChrName, l as filterUsingGenoPos, m as IsDataDeepTileset, n as IsDomainChr, o as IsDomainInterval, q as IsDomainChrInterval, S as SUPPORTED_CHANNELS, w as insertItemToArray, x as getAutoCompleteId, y as IsChannelValue, z as getValueUsingChannel, B as rectProperty, C as pointProperty, D as barProperty, E as IsStackedChannel, F as IsDomainArray, P as PREDEFINED_COLOR_STR_MAP, G as IsRangeArray, H as Is2DTrack, J as isTabularDataFetcher, K as drawPreEmbellishment, L as drawMark, M as drawPostEmbellishment, N as getRelativeGenomicPosition, O as hasDataTransform, Q as IsXAxis, T as IsMouseEventsDeep, U as colorToHex, V as flatArrayToPairArray, W as DEWFAULT_TITLE_PADDING_ON_TOP_AND_BOTTOM, X as traverseTracksAndViews, Y as traverseViewArrangements, Z as DEFAULT_VIEW_SPACING, _ as DEFAULT_INNER_RADIUS_PROP, $ as IsDummyTrack, a0 as IsOverlaidTrack, a1 as IsYAxis, a2 as DEFAULT_CIRCULAR_VIEW_PADDING, a3 as IsDataDeep, a4 as IsHiGlassMatrix, a5 as getHiGlassColorRange, a6 as DEFAULT_TEXT_STYLE, a7 as overrideDataTemplates, a8 as traverseToFixSpecDownstream, a9 as GenomicPositionHelper, aa as isObject } from "./exported-utils-d4f1abea.js";
+import { A as Ajv, I as IsChannelDeep, r as resolveSuperposedTracks, t as traverseTracks, a as IsTemplateTrack, g as getTextStyle, c as computeChromSizes, b as cartesianToPolar, u as uuid, R as RADIAN_GAP, v as valueToRadian, p as pointsToDegree, d as commonjsGlobal, e as RemoteFile, f as IsOneOfFilter, h as IsRangeFilter, i as IsIncludeFilter, j as getChannelKeysByAggregateFnc, k as getChannelKeysByType, s as sanitizeChrName, l as filterUsingGenoPos, m as IsDataDeepTileset, n as IsDomainChr, o as IsDomainInterval, q as IsDomainChrInterval, S as SUPPORTED_CHANNELS, w as insertItemToArray, x as getAutoCompleteId, y as IsChannelValue, z as getValueUsingChannel, B as rectProperty, C as pointProperty, D as barProperty, E as IsStackedChannel, F as IsDomainArray, P as PREDEFINED_COLOR_STR_MAP, G as IsRangeArray, H as Is2DTrack, J as isTabularDataFetcher, K as drawPreEmbellishment, L as drawMark, M as drawPostEmbellishment, N as getRelativeGenomicPosition, O as hasDataTransform, Q as IsXAxis, T as IsMouseEventsDeep, U as colorToHex, V as flatArrayToPairArray, W as DEWFAULT_TITLE_PADDING_ON_TOP_AND_BOTTOM, X as traverseTracksAndViews, Y as traverseViewArrangements, Z as DEFAULT_VIEW_SPACING, _ as DEFAULT_INNER_RADIUS_PROP, $ as IsDummyTrack, a0 as IsOverlaidTrack, a1 as IsYAxis, a2 as DEFAULT_CIRCULAR_VIEW_PADDING, a3 as IsDataDeep, a4 as IsHiGlassMatrix, a5 as getHiGlassColorRange, a6 as DEFAULT_TEXT_STYLE, a7 as overrideDataTemplates, a8 as traverseToFixSpecDownstream, a9 as GenomicPositionHelper, aa as isObject } from "./exported-utils-ac60e3c5.js";
 import higlassRegister from "higlass-register";
 import { TextTrack } from "higlass-text";
 import RBush from "rbush";
@@ -52,7 +52,7 @@ import require$$0 from "react-dom";
 import { HiGlassComponent } from "higlass";
 import { ResizeSensor } from "css-element-queries";
 const name = "gosling.js";
-const version = "0.15.0";
+const version = "0.16.0";
 const $ref$2 = "#/definitions/GoslingSpec";
 const $schema$2 = "http://json-schema.org/draft-07/schema#";
 const definitions$2 = {
@@ -23764,7 +23764,7 @@ class GoslingTrackModel {
     this.theme = theme != null ? theme : getTheme();
     this.dataAggregated = data;
     this.specOriginal = spec;
-    this.specComplete = structuredClone(spec);
+    this.specComplete = JSON.parse(JSON.stringify(spec));
     this.channelScales = {};
     this.mouseEventModel = new MouseEventModel();
     const validity = this.validateSpec();
@@ -24432,7 +24432,7 @@ const config$1 = {
   }
 };
 const factory$1 = (HGC, context, options) => {
-  var _assembly2, _processedTileInfo, _mouseDownX, _mouseDownY, _isRangeBrushActivated, _gBrush, _loadingTextStyleObj, _loadingTextBg, _loadingText, _tilesToId, tilesToId_fn, _binsPerTile, binsPerTile_get, _generateTabularData, generateTabularData_fn, _onMouseDown, onMouseDown_fn, _onMouseMove, onMouseMove_fn, _onMouseUp, onMouseUp_fn, _onMouseOut, onMouseOut_fn, _getElementsWithinMouse, getElementsWithinMouse_fn, _publishTrackEvents, publishTrackEvents_fn, _onRangeBrush, onRangeBrush_fn, _highlightMarks, highlightMarks_fn, _publishOnNewTrack, publishOnNewTrack_fn, _hasStretchableGraphics, hasStretchableGraphics_fn, _isTooStretched, isTooStretched_fn;
+  var _assembly2, _processedTileInfo, _mouseDownX, _mouseDownY, _isRangeBrushActivated, _gBrush, _loadingTextStyleObj, _loadingTextBg, _loadingText, _processedTileMap, _tilesToId, tilesToId_fn, _binsPerTile, binsPerTile_get, _generateTabularData, generateTabularData_fn, _onMouseDown, onMouseDown_fn, _onMouseMove, onMouseMove_fn, _onMouseUp, onMouseUp_fn, _onMouseOut, onMouseOut_fn, _getElementsWithinMouse, getElementsWithinMouse_fn, _publishTrackEvents, publishTrackEvents_fn, _onRangeBrush, onRangeBrush_fn, _highlightMarks, highlightMarks_fn, _publishOnNewTrack, publishOnNewTrack_fn, _hasStretchableGraphics, hasStretchableGraphics_fn, _isTooStretched, isTooStretched_fn;
   const { tileProxy } = HGC.services;
   const { BarTrack } = HGC.tracks;
   const loadingTextStyle = getTextStyle({ color: "black", size: 12 });
@@ -24523,6 +24523,8 @@ const factory$1 = (HGC, context, options) => {
       __privateAdd(this, _loadingText, new HGC.libraries.PIXI.Text("", loadingTextStyle));
       __publicField(this, "prevVisibleAndFetchedTiles");
       __publicField(this, "resolvedTracks");
+      // This is used to persist processed tile data across draw() calls.
+      __privateAdd(this, _processedTileMap, /* @__PURE__ */ new WeakMap());
       __publicField(this, "hideMousePosition");
       context.dataFetcher.track = this;
       __privateSet(this, _processedTileInfo, {});
@@ -24679,6 +24681,7 @@ const factory$1 = (HGC, context, options) => {
       this.getResolvedTracks(true);
       this.clearMouseEventData();
       this.textsBeingUsed = 0;
+      __privateSet(this, _processedTileMap, /* @__PURE__ */ new WeakMap());
       this.processAllTiles(true);
       this.draw();
       this.forceDraw();
@@ -24790,6 +24793,9 @@ const factory$1 = (HGC, context, options) => {
       var _a, _b;
       this.tileSize = (_b = (_a = this.tilesetInfo) == null ? void 0 : _a.tile_size) != null ? _b : 1024;
       const tiles = this.visibleAndFetchedTiles();
+      if (tiles.every((tile) => __privateGet(this, _processedTileMap).get(tile) !== void 0)) {
+        return;
+      }
       tiles.forEach((tile) => __privateMethod(this, _generateTabularData, generateTabularData_fn).call(this, tile, force));
       this.combineAllTilesIfNeeded();
       const models = tiles.flatMap((tile) => this.transformDataAndCreateModels(tile));
@@ -24798,6 +24804,9 @@ const factory$1 = (HGC, context, options) => {
       if (flatTileData.length !== 0) {
         this.options.siblingIds.forEach((id) => publish("rawData", { id, data: flatTileData }));
       }
+      tiles.forEach((tile) => {
+        __privateGet(this, _processedTileMap).set(tile, true);
+      });
     }
     /**
      * This is currently for testing the new way of rendering visual elements. Called by this.draw()
@@ -25076,7 +25085,7 @@ const factory$1 = (HGC, context, options) => {
         } catch (e) {
         }
         const [trackWidth, trackHeight] = this.dimensions;
-        const axisSize = IsXAxis(resolvedSpec) ? HIGLASS_AXIS_SIZE : 0;
+        const axisSize = IsXAxis(resolvedSpec) && this.options.spec.layout === "linear" ? HIGLASS_AXIS_SIZE : 0;
         const [w, h] = [trackWidth, trackHeight + axisSize];
         const circularFactor = Math.min(w, h) / Math.min(resolvedSpec.width, resolvedSpec.height);
         if (resolvedSpec.innerRadius) {
@@ -25248,6 +25257,7 @@ const factory$1 = (HGC, context, options) => {
   _loadingTextStyleObj = new WeakMap();
   _loadingTextBg = new WeakMap();
   _loadingText = new WeakMap();
+  _processedTileMap = new WeakMap();
   _tilesToId = new WeakSet();
   tilesToId_fn = function(xTiles, yTiles, zoomLevel) {
     if (!yTiles) {