gnosys 5.2.21 → 5.2.23

package/dist/cli.js

@@ -2527,8 +2527,8 @@ program
     const skipped = [];
     const failed = [];
     for (const projectDir of projects) {
-        // Skip test projects in /tmp/
-        if (projectDir.startsWith("/tmp/") || projectDir.startsWith("/private/tmp/")) {
+        // Skip test/temp directories
+        if (projectDir.startsWith("/tmp/") || projectDir.startsWith("/private/tmp/") || projectDir.startsWith("/var/folders/") || projectDir.startsWith("/private/var/folders/")) {
             continue;
         }
         const storePath = path.join(projectDir, ".gnosys");
@@ -2703,29 +2703,39 @@ program
     const stores = resolver.getStores();
     console.log("Gnosys Doctor");
     console.log("=============\n");
-    // Check gnosys.db (v2.0 agent-native store)
+    // Check local gnosys.db (legacy — should NOT exist in DB-only architecture)
     if (stores.length > 0) {
-        console.log("Agent-Native Store (gnosys.db):");
-        try {
-            const db = new GnosysDB(stores[0].path);
-            if (db.isAvailable() && db.isMigrated()) {
-                const counts = db.getMemoryCount();
-                console.log(`  Status: ✓ migrated (schema v${db.getSchemaVersion()})`);
-                console.log(`  Active: ${counts.active} | Archived: ${counts.archived} | Total: ${counts.total}`);
-            }
-            else if (db.isAvailable()) {
-                console.log("  Status: ✗ not migrated (run gnosys migrate)");
-            }
-            else {
-                console.log("  Status: — not available (better-sqlite3 not installed)");
-            }
-            db.close();
+        const localDbPath = path.join(stores[0].path, "gnosys.db");
+        const localDbExists = await fs.stat(localDbPath).then(() => true).catch(() => false);
+        if (localDbExists) {
+            console.log("Local Store (gnosys.db):");
+            console.log("  ⚠ Local gnosys.db found — this is a legacy artifact.");
+            console.log("  All memories should be in the central DB (~/.gnosys/gnosys.db).");
+            console.log(`  Safe to remove: rm "${localDbPath}"`);
+            console.log("");
         }
-        catch {
-            console.log("  Status: — not initialized");
+    }
+    // Check central DB
+    console.log("Central DB (~/.gnosys/gnosys.db):");
+    try {
+        const db = GnosysDB.openCentral();
+        if (db.isAvailable() && db.isMigrated()) {
+            const counts = db.getMemoryCount();
+            console.log(`  Status: ✓ migrated (schema v${db.getSchemaVersion()})`);
+            console.log(`  Active: ${counts.active} | Archived: ${counts.archived} | Total: ${counts.total}`);
         }
-        console.log("");
+        else if (db.isAvailable()) {
+            console.log("  Status: ✗ not migrated (run gnosys upgrade)");
+        }
+        else {
+            console.log("  Status: — not available (better-sqlite3 not installed)");
+        }
+        db.close();
+    }
+    catch {
+        console.log("  Status: — not initialized");
     }
+    console.log("");
     // Check stores
     console.log("Stores:");
     if (stores.length === 0) {