gitnexus 1.6.4-rc.65 → 1.6.4-rc.66

package/dist/core/lbug/lbug-adapter.js

@@ -206,6 +206,15 @@ export const withLbugDb = async (dbPath, operation) => {
             // Close stale connection inside the session lock to prevent race conditions
             // with concurrent operations that might acquire the lock between cleanup steps
             await runWithSessionLock(async () => {
+                // CHECKPOINT before close to flush WAL contents (same rationale as closeLbug)
+                if (conn) {
+                    try {
+                        await conn.query('CHECKPOINT');
+                    }
+                    catch {
+                        /* best-effort */
+                    }
+                }
                 try {
                     if (conn)
                         await conn.close();
@@ -245,6 +254,15 @@ const ensureLbugInitialized = async (dbPath) => {
 const doInitLbug = async (dbPath) => {
     // Different database requested — close the old one first
     if (conn || db) {
+        // CHECKPOINT before close to flush WAL contents (same rationale as closeLbug)
+        if (conn) {
+            try {
+                await conn.query('CHECKPOINT');
+            }
+            catch {
+                /* ignore — older LadybugDB or schemaless DB may not accept it */
+            }
+        }
         try {
             if (conn)
                 await conn.close();
@@ -931,6 +949,22 @@ export const fetchExistingEmbeddingHashes = async (execQuery) => {
     }
 };
 export const closeLbug = async () => {
+    // CHECKPOINT before close so the WAL/.shadow contents are flushed into
+    // the main database file. Without this, LadybugDB 0.16.0's non-blocking
+    // checkpoint thread can outlive the close call and leave sidecar pages
+    // pending on disk, which makes a subsequent read-side open either race
+    // with the WAL replay or trip the database-id check on the sidecars.
+    // This is especially critical after embedding writes, which generate
+    // large amounts of WAL data. CHECKPOINT is a no-op when there's nothing
+    // pending, so it's cheap on the happy path.
+    if (conn) {
+        try {
+            await conn.query('CHECKPOINT');
+        }
+        catch {
+            /* ignore — older LadybugDB or schemaless DB may not accept it */
+        }
+    }
     if (conn) {
         try {
             await conn.close();

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "gitnexus",
-  "version": "1.6.4-rc.65",
+  "version": "1.6.4-rc.66",
   "description": "Graph-powered code intelligence for AI agents. Index any codebase, query via MCP or CLI.",
   "author": "Abhigyan Patwari",
   "license": "PolyForm-Noncommercial-1.0.0",