gitnexus 1.6.13-rc.71 → 1.6.13-rc.72

package/dist/core/run-analyze.js

@@ -3505,6 +3505,7 @@ async function runFullAnalysisInner(repoPath, options, callbacks, writeTarget, c
             const vectorIndexReady = await buildVectorIndex();
             semanticMode = vectorIndexReady ? 'vector-index' : 'exact-scan';
         }
+        let stagedCheckpointEmbeddingCount;
         if (!embeddingSkipped) {
             const { isHttpMode } = await import('./embeddings/http-client.js');
             const httpMode = isHttpMode();
@@ -3550,12 +3551,14 @@ async function runFullAnalysisInner(repoPath, options, callbacks, writeTarget, c
             // /api/embed checkpoint writer in server/api.ts already uses, which also
             // keeps a concurrent writer's update from being reverted by a stale
             // snapshot) and replace ONLY `embeddingCheckpoint` — plus
-            // `stats.embeddings` when the caller actually MEASURED the live count
-            // (the post-window `onCheckpoint`). The window-start callback passes
-            // nothing: restating the previous run's count there both re-published a
-            // stale number and clobbered the live count a preceding `onCheckpoint`
-            // had just written.
+            // `stats.embeddings` when the caller actually MEASURED the published
+            // index (the post-window `onCheckpoint` on an in-place build). A staging
+            // build's count is not published until the atomic swap succeeds. The
+            // window-start callback passes nothing, preserving the latest count.
             const saveEmbeddingCheckpoint = async (checkpoint, pendingNodeIds, embeddings) => {
+                if (embeddings !== undefined && buildPath !== lbugPath) {
+                    stagedCheckpointEmbeddingCount = embeddings;
+                }
                 const latestMeta = (await loadMeta(metaDir)) ?? existingMeta;
                 // First-ever analyze of this repo: no meta exists on disk yet (the
                 // pre-wipe dirty stamp only fires when one does). Mint the minimum
@@ -3569,7 +3572,9 @@ async function runFullAnalysisInner(repoPath, options, callbacks, writeTarget, c
                 };
                 await saveMeta(metaDir, {
                     ...base,
-                    ...(embeddings === undefined ? {} : { stats: { ...base.stats, embeddings } }),
+                    ...(embeddings === undefined || buildPath !== lbugPath
+                        ? {}
+                        : { stats: { ...base.stats, embeddings } }),
                     // Written by a run that is still IN FLIGHT — see the `kind` doc in
                     // repo-manager.ts.
                     embeddingCheckpoint: mintInterruptedCheckpoint(embeddingIdentity, checkpoint, pendingNodeIds),
@@ -3726,11 +3731,10 @@ async function runFullAnalysisInner(repoPath, options, callbacks, writeTarget, c
         // already written to disk: prior meta says 0, a clean run inserts
         // embeddings and checkpoints the real count, the final probe is
         // unavailable, and finalization carries the stale 0 forward while reporting
-        // success. `loadMeta` never throws (it returns null), and the checkpoint
-        // writer already re-reads the same way, so this is the same freshness
-        // discipline applied to the same field.
+        // success. For a staged build, use its last measured count only in the
+        // final meta, written after the swap; never publish it at a checkpoint.
         const latestMetaForCount = embeddingCount === undefined ? ((await loadMeta(metaDir)) ?? existingMeta) : undefined;
-        const persistedEmbeddingCount = resolvePersistedEmbeddingCount(measuredEmbeddingCount, latestMetaForCount?.stats?.embeddings);
+        const persistedEmbeddingCount = resolvePersistedEmbeddingCount(measuredEmbeddingCount, stagedCheckpointEmbeddingCount ?? latestMetaForCount?.stats?.embeddings);
         const { getRuntimeCapabilities } = await import('./platform/capabilities.js');
         const runtimeCapabilities = getRuntimeCapabilities();
         // `semanticMode` is authoritative when set (Phase 4 reported what it

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "gitnexus",
-  "version": "1.6.13-rc.71",
+  "version": "1.6.13-rc.72",
   "description": "Graph-powered code intelligence for AI agents. Index any codebase, query via MCP or CLI.",
   "author": "Abhigyan Patwari",
   "license": "PolyForm-Noncommercial-1.0.0",