gitnexus 1.5.3 → 1.6.1

package/dist/storage/git.js

@@ -52,3 +52,28 @@ export const hasGitDir = (dirPath) => {
         return false;
     }
 };
+/**
+ * Parse unified diff output (with -U0) into per-file hunk ranges.
+ * Extracts the new-file line ranges from @@ hunk headers.
+ */
+export function parseDiffHunks(diffOutput) {
+    const files = [];
+    let current = null;
+    for (const line of diffOutput.split('\n')) {
+        if (line.startsWith('+++ b/')) {
+            current = { filePath: line.slice(6), hunks: [] };
+            files.push(current);
+        }
+        else if (line.startsWith('@@') && current) {
+            const match = line.match(/@@ -\d+(?:,\d+)? \+(\d+)(?:,(\d+))? @@/);
+            if (match) {
+                const start = parseInt(match[1], 10);
+                const count = match[2] !== undefined ? parseInt(match[2], 10) : 1;
+                if (count > 0) {
+                    current.hunks.push({ startLine: start, endLine: start + count - 1 });
+                }
+            }
+        }
+    }
+    return files;
+}

package/dist/storage/repo-manager.js

@@ -167,7 +167,7 @@ export const addToGitignore = async (repoPath) => {
  * Get the path to the global GitNexus directory
  */
 export const getGlobalDir = () => {
-    return path.join(os.homedir(), '.gitnexus');
+    return process.env.GITNEXUS_HOME || path.join(os.homedir(), '.gitnexus');
 };
 /**
  * Get the path to the global registry file

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "gitnexus",
-  "version": "1.5.3",
+  "version": "1.6.1",
   "description": "Graph-powered code intelligence for AI agents. Index any codebase, query via MCP or CLI.",
   "author": "Abhigyan Patwari",
   "license": "PolyForm-Noncommercial-1.0.0",
@@ -46,6 +46,7 @@
     "test:integration": "vitest run test/integration",
     "test:watch": "vitest",
     "test:coverage": "vitest run --coverage",
+    "postinstall": "node scripts/patch-tree-sitter-swift.cjs",
     "prepare": "node scripts/build.js",
     "prepack": "node scripts/build.js"
   },
@@ -53,6 +54,7 @@
     "@huggingface/transformers": "^3.0.0",
     "@ladybugdb/core": "^0.15.2",
     "@modelcontextprotocol/sdk": "^1.0.0",
+    "@scarf/scarf": "^1.4.0",
     "cli-progress": "^3.12.0",
     "commander": "^12.0.0",
     "cors": "^2.8.5",
@@ -62,6 +64,7 @@
     "graphology-indices": "^0.17.0",
     "graphology-utils": "^2.3.0",
     "ignore": "^7.0.5",
+    "js-yaml": "^4.1.1",
     "lru-cache": "^11.0.0",
     "mnemonist": "^0.39.0",
     "onnxruntime-node": "^1.24.0",
@@ -81,8 +84,9 @@
     "uuid": "^13.0.0"
   },
   "optionalDependencies": {
-    "tree-sitter-dart": "github:UserNobody14/tree-sitter-dart#80e23c07b64494f7e21090bb3450223ef0b192f4",
+    "tree-sitter-dart": "https://github.com/UserNobody14/tree-sitter-dart/archive/80e23c07b64494f7e21090bb3450223ef0b192f4.tar.gz",
     "tree-sitter-kotlin": "^0.3.8",
+    "tree-sitter-proto": "file:./vendor/tree-sitter-proto",
     "tree-sitter-swift": "^0.6.0"
   },
   "devDependencies": {
@@ -90,6 +94,7 @@
     "@types/cli-progress": "^3.11.6",
     "@types/cors": "^2.8.17",
     "@types/express": "^4.17.21",
+    "@types/js-yaml": "^4.0.9",
     "@types/node": "^20.0.0",
     "@types/uuid": "^10.0.0",
     "@vitest/coverage-v8": "^4.0.18",
@@ -100,7 +105,8 @@
   "overrides": {
     "@huggingface/transformers": {
       "onnxruntime-node": "$onnxruntime-node"
-    }
+    },
+    "tree-sitter-c": "0.23.2"
   },
   "engines": {
     "node": ">=20.0.0"

package/scripts/patch-tree-sitter-swift.cjs

@@ -0,0 +1,78 @@
+#!/usr/bin/env node
+/**
+ * WORKAROUND: tree-sitter-swift@0.6.0 binding.gyp build failure
+ *
+ * Background:
+ *   tree-sitter-swift@0.6.0's binding.gyp contains an "actions" array that
+ *   invokes `tree-sitter generate` to regenerate parser.c from grammar.js.
+ *   This is intended for grammar developers, but the published npm package
+ *   already ships pre-generated parser files (parser.c, scanner.c), so the
+ *   actions are unnecessary for consumers. Since consumers don't have
+ *   tree-sitter-cli installed, the actions always fail during `npm install`.
+ *
+ * Why we can't just upgrade:
+ *   tree-sitter-swift@0.7.1 fixes this (removes postinstall, ships prebuilds),
+ *   but it requires tree-sitter@^0.22.1. The upstream project pins tree-sitter
+ *   to ^0.21.0 and all other grammar packages depend on that version.
+ *   Upgrading tree-sitter would be a separate breaking change.
+ *
+ * How this workaround works:
+ *   1. tree-sitter-swift's own postinstall fails (npm warns but continues)
+ *   2. This script runs as gitnexus's postinstall
+ *   3. It removes the "actions" array from binding.gyp
+ *   4. It rebuilds the native binding with the cleaned binding.gyp
+ *
+ * TODO: Remove this script when tree-sitter is upgraded to ^0.22.x,
+ *       which allows using tree-sitter-swift@0.7.1+ directly.
+ */
+const fs = require('fs');
+const path = require('path');
+const { execSync } = require('child_process');
+
+const swiftDir = path.join(__dirname, '..', 'node_modules', 'tree-sitter-swift');
+const bindingPath = path.join(swiftDir, 'binding.gyp');
+
+try {
+  if (!fs.existsSync(bindingPath)) {
+    process.exit(0);
+  }
+
+  const content = fs.readFileSync(bindingPath, 'utf8');
+  let needsRebuild = false;
+
+  if (content.includes('"actions"')) {
+    // Strip Python-style comments (#) and trailing commas before JSON parsing
+    const cleaned = content
+      .replace(/#[^\n]*/g, '') // Remove # comments
+      .replace(/,(\s*[\]}])/g, '$1'); // Remove trailing commas before ] or }
+    const gyp = JSON.parse(cleaned);
+
+    if (gyp.targets && gyp.targets[0] && gyp.targets[0].actions) {
+      delete gyp.targets[0].actions;
+      fs.writeFileSync(bindingPath, JSON.stringify(gyp, null, 2) + '\n');
+      console.log('[tree-sitter-swift] Patched binding.gyp (removed actions array)');
+      needsRebuild = true;
+    }
+  }
+
+  // Check if native binding exists
+  const bindingNode = path.join(swiftDir, 'build', 'Release', 'tree_sitter_swift_binding.node');
+  if (!fs.existsSync(bindingNode)) {
+    needsRebuild = true;
+  }
+
+  if (needsRebuild) {
+    console.log('[tree-sitter-swift] Rebuilding native binding...');
+    execSync('npx node-gyp rebuild', {
+      cwd: swiftDir,
+      stdio: 'pipe',
+      timeout: 120000,
+    });
+    console.log('[tree-sitter-swift] Native binding built successfully');
+  }
+} catch (err) {
+  console.warn('[tree-sitter-swift] Could not build native binding:', err.message);
+  console.warn(
+    '[tree-sitter-swift] You may need to manually run: cd node_modules/tree-sitter-swift && npx node-gyp rebuild',
+  );
+}

package/vendor/tree-sitter-proto/binding.gyp

@@ -0,0 +1,30 @@
+{
+  "targets": [
+    {
+      "target_name": "tree_sitter_proto_binding",
+      "dependencies": [
+        "<!(node -p \"require('node-addon-api').targets\"):node_addon_api_except",
+      ],
+      "include_dirs": [
+        "src",
+      ],
+      "sources": [
+        "bindings/node/binding.cc",
+        "src/parser.c",
+        # NOTE: if your language has an external scanner, add it here.
+      ],
+      "conditions": [
+        ["OS!='win'", {
+          "cflags_c": [
+            "-std=c11",
+          ],
+        }, { # OS == "win"
+          "cflags_c": [
+            "/std:c11",
+            "/utf-8",
+          ],
+        }],
+      ],
+    }
+  ]
+}

package/vendor/tree-sitter-proto/bindings/node/binding.cc

@@ -0,0 +1,20 @@
+#include <napi.h>
+
+typedef struct TSLanguage TSLanguage;
+
+extern "C" TSLanguage *tree_sitter_proto();
+
+// "tree-sitter", "language" hashed with BLAKE2
+const napi_type_tag LANGUAGE_TYPE_TAG = {
+    0x8AF2E5212AD58ABF, 0xD5006CAD83ABBA16
+};
+
+Napi::Object Init(Napi::Env env, Napi::Object exports) {
+    exports["name"] = Napi::String::New(env, "proto");
+    auto language = Napi::External<TSLanguage>::New(env, tree_sitter_proto());
+    language.TypeTag(&LANGUAGE_TYPE_TAG);
+    exports["language"] = language;
+    return exports;
+}
+
+NODE_API_MODULE(tree_sitter_proto_binding, Init)

package/vendor/tree-sitter-proto/bindings/node/index.d.ts

@@ -0,0 +1,28 @@
+type BaseNode = {
+  type: string;
+  named: boolean;
+};
+
+type ChildNode = {
+  multiple: boolean;
+  required: boolean;
+  types: BaseNode[];
+};
+
+type NodeInfo =
+  | (BaseNode & {
+      subtypes: BaseNode[];
+    })
+  | (BaseNode & {
+      fields: { [name: string]: ChildNode };
+      children: ChildNode[];
+    });
+
+type Language = {
+  name: string;
+  language: unknown;
+  nodeTypeInfo: NodeInfo[];
+};
+
+declare const language: Language;
+export = language;

package/vendor/tree-sitter-proto/bindings/node/index.js

@@ -0,0 +1,7 @@
+const root = require("path").join(__dirname, "..", "..");
+
+module.exports = require("node-gyp-build")(root);
+
+try {
+  module.exports.nodeTypeInfo = require("../../src/node-types.json");
+} catch (_) {}

package/vendor/tree-sitter-proto/package.json

@@ -0,0 +1,18 @@
+{
+  "name": "tree-sitter-proto",
+  "version": "0.4.1",
+  "description": "tree-sitter grammar for protobuf — ABI 14 build from coder3101/tree-sitter-proto latest grammar.js, compatible with tree-sitter 0.25",
+  "repository": "https://github.com/coder3101/tree-sitter-proto",
+  "license": "MIT",
+  "main": "bindings/node",
+  "scripts": {
+    "install": "node-gyp-build"
+  },
+  "peerDependencies": {
+    "tree-sitter": ">=0.21.0"
+  },
+  "dependencies": {
+    "node-addon-api": "^8.0.0",
+    "node-gyp-build": "^4.8.0"
+  }
+}