git-worktree-organize 1.0.0

package/AGENTS.md

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+# Agent Instructions
+
+This project uses **bd** (beads) for issue tracking. Run `bd onboard` to get started.
+
+## Quick Reference
+
+```bash
+bd ready              # Find available work
+bd show <id>          # View issue details
+bd update <id> --claim  # Claim work atomically
+bd close <id>         # Complete work
+bd sync               # Sync with git
+```
+
+## Non-Interactive Shell Commands
+
+**ALWAYS use non-interactive flags** with file operations to avoid hanging on confirmation prompts.
+
+Shell commands like `cp`, `mv`, and `rm` may be aliased to include `-i` (interactive) mode on some systems, causing the agent to hang indefinitely waiting for y/n input.
+
+**Use these forms instead:**
+```bash
+# Force overwrite without prompting
+cp -f source dest           # NOT: cp source dest
+mv -f source dest           # NOT: mv source dest
+rm -f file                  # NOT: rm file
+
+# For recursive operations
+rm -rf directory            # NOT: rm -r directory
+cp -rf source dest          # NOT: cp -r source dest
+```
+
+**Other commands that may prompt:**
+- `scp` - use `-o BatchMode=yes` for non-interactive
+- `ssh` - use `-o BatchMode=yes` to fail instead of prompting
+- `apt-get` - use `-y` flag
+- `brew` - use `HOMEBREW_NO_AUTO_UPDATE=1` env var
+
+<!-- BEGIN BEADS INTEGRATION -->
+## Issue Tracking with bd (beads)
+
+**IMPORTANT**: This project uses **bd (beads)** for ALL issue tracking. Do NOT use markdown TODOs, task lists, or other tracking methods.
+
+### Why bd?
+
+- Dependency-aware: Track blockers and relationships between issues
+- Git-friendly: Auto-syncs to JSONL for version control
+- Agent-optimized: JSON output, ready work detection, discovered-from links
+- Prevents duplicate tracking systems and confusion
+
+### Quick Start
+
+**Check for ready work:**
+
+```bash
+bd ready --json
+```
+
+**Create new issues:**
+
+```bash
+bd create "Issue title" --description="Detailed context" -t bug|feature|task -p 0-4 --json
+bd create "Issue title" --description="What this issue is about" -p 1 --deps discovered-from:bd-123 --json
+```
+
+**Claim and update:**
+
+```bash
+bd update <id> --claim --json
+bd update bd-42 --priority 1 --json
+```
+
+**Complete work:**
+
+```bash
+bd close bd-42 --reason "Completed" --json
+```
+
+### Issue Types
+
+- `bug` - Something broken
+- `feature` - New functionality
+- `task` - Work item (tests, docs, refactoring)
+- `epic` - Large feature with subtasks
+- `chore` - Maintenance (dependencies, tooling)
+
+### Priorities
+
+- `0` - Critical (security, data loss, broken builds)
+- `1` - High (major features, important bugs)
+- `2` - Medium (default, nice-to-have)
+- `3` - Low (polish, optimization)
+- `4` - Backlog (future ideas)
+
+### Workflow for AI Agents
+
+1. **Check ready work**: `bd ready` shows unblocked issues
+2. **Claim your task atomically**: `bd update <id> --claim`
+3. **Work on it**: Implement, test, document
+4. **Discover new work?** Create linked issue:
+   - `bd create "Found bug" --description="Details about what was found" -p 1 --deps discovered-from:<parent-id>`
+5. **Complete**: `bd close <id> --reason "Done"`
+
+### Auto-Sync
+
+bd automatically syncs with git:
+
+- Exports to `.beads/issues.jsonl` after changes (5s debounce)
+- Imports from JSONL when newer (e.g., after `git pull`)
+- No manual export/import needed!
+
+### Important Rules
+
+- ✅ Use bd for ALL task tracking
+- ✅ Always use `--json` flag for programmatic use
+- ✅ Link discovered work with `discovered-from` dependencies
+- ✅ Check `bd ready` before asking "what should I work on?"
+- ❌ Do NOT create markdown TODO lists
+- ❌ Do NOT use external issue trackers
+- ❌ Do NOT duplicate tracking systems
+
+For more details, see README.md and docs/QUICKSTART.md.
+
+<!-- END BEADS INTEGRATION -->
+
+## Landing the Plane (Session Completion)
+
+**When ending a work session**, you MUST complete ALL steps below. Work is NOT complete until `git push` succeeds.
+
+**MANDATORY WORKFLOW:**
+
+1. **File issues for remaining work** - Create issues for anything that needs follow-up
+2. **Run quality gates** (if code changed) - Tests, linters, builds
+3. **Update issue status** - Close finished work, update in-progress items
+4. **PUSH TO REMOTE** - This is MANDATORY:
+   ```bash
+   git pull --rebase
+   bd sync
+   git push
+   git status  # MUST show "up to date with origin"
+   ```
+5. **Clean up** - Clear stashes, prune remote branches
+6. **Verify** - All changes committed AND pushed
+7. **Hand off** - Provide context for next session
+
+**CRITICAL RULES:**
+- Work is NOT complete until `git push` succeeds
+- NEVER stop before pushing - that leaves work stranded locally
+- NEVER say "ready to push when you are" - YOU must push
+- If push fails, resolve and retry until it succeeds

package/README.md

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+# git-worktree-organize
+
+Convert any git repository into the canonical bare-hub worktree layout, so every branch lives in its own directory and you never need to stash or switch again.
+
+## What it does
+
+Takes an existing git repo (any type) and migrates it into this structure:
+
+```
+<dest>/
+├── .bare/       ← bare git repo (the actual git database)
+├── .git         ← plain file: "gitdir: ./.bare"
+├── main/        ← worktree for the main branch
+└── feature-x/  ← worktree for each other branch
+```
+
+Each branch directory is a fully functional working tree. Open them in separate terminals or IDE windows simultaneously — no stashing, no switching.
+
+The `.git` file at the hub root makes tools that walk up looking for `.git` (IDEs, linters, etc.) find the repo correctly.
+
+## Installation
+
+**Zero-install (npx):**
+```sh
+npx git-worktree-organize <source> [destination]
+```
+
+**Global install:**
+```sh
+npm install -g git-worktree-organize
+git-worktree-organize <source> [destination]
+```
+
+## Usage
+
+```
+git-worktree-organize <source> [destination]
+```
+
+| Argument      | Description                                                      |
+|---------------|------------------------------------------------------------------|
+| `source`      | Path to the existing git repository to migrate                   |
+| `destination` | Target hub directory (default: `<parent>/<repo-name>-bare`)      |
+
+The tool shows a preview of what will be created and asks for confirmation before making any changes.
+
+## Example
+
+Given a repo at `/projects/myrepo` with branches `main`, `feature-x`, and `hotfix`:
+
+```sh
+git-worktree-organize /projects/myrepo /projects/myrepo-bare
+```
+
+Result:
+
+```
+/projects/myrepo-bare/
+├── .bare/
+├── .git
+├── main/
+├── feature-x/
+└── hotfix/
+```
+
+The original `/projects/myrepo` is moved to `/projects/myrepo-bare/main/`. No data is lost.
+
+## Supported repo types
+
+- **Standard repos** — ordinary repos with a `.git` directory
+- **Bare-root** — bare repo with git internals at the root (`HEAD`, `refs/`, `objects/`)
+- **Bare-dotgit** — repo where `.git` is a bare git directory (`core.bare = true`)
+- **Bare-external** — repo where `.git` is a file pointing to a gitdir elsewhere
+- **Bare-hub** — already in the bare-hub layout (re-organizes worktrees into the canonical structure)
+
+Branch names with slashes (e.g. `feature/auth`) are mapped to hyphenated directory names (`feature-auth`).
+
+## Why this layout
+
+Having every branch as a sibling directory means you can work on multiple branches simultaneously without stashing or switching. It is also easier to run branch-specific build artifacts side by side, and the `.git` file at the hub root ensures IDE and tooling compatibility without any special configuration.
+
+## License
+
+MIT — see [github.com/drmikecrowe/git-worktree-organize](https://github.com/drmikecrowe/git-worktree-organize).

package/bun.lock

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+  }
+}

package/package.json

@@ -0,0 +1,21 @@
+{
+  "name": "git-worktree-organize",
+  "version": "1.0.0",
+  "description": "Convert any git repo into the canonical bare-hub worktree layout",
+  "type": "module",
+  "bin": {
+    "git-worktree-organize": "./src/cli.ts"
+  },
+  "scripts": {
+    "build": "bun build src/cli.ts --outfile dist/cli.js --target node",
+    "test": "bun test",
+    "test:watch": "vitest",
+    "publish": "op run -- npm publish"
+  },
+  "devDependencies": {
+    "@types/bun": "latest",
+    "typescript": "^5.0.0",
+    "vitest": "^2.0.0"
+  },
+  "license": "MIT"
+}

package/src/cli.ts

@@ -0,0 +1,143 @@
+#!/usr/bin/env bun
+/**
+ * git-worktree-organize <source> [destination]
+ *
+ * Convert any git repo into the canonical bare-hub worktree layout.
+ */
+
+import { resolve, join, dirname, basename } from 'node:path'
+import { $ } from 'bun'
+import { detect } from './detect.ts'
+import { listWorktrees } from './worktrees.ts'
+import { migrate, sanitizeBranch } from './migrate.ts'
+
+// ANSI color helpers
+const GREEN  = '\x1b[32m'
+const YELLOW = '\x1b[33m'
+const BOLD   = '\x1b[1m'
+const RESET  = '\x1b[0m'
+
+function green(s: string)  { return `${GREEN}${s}${RESET}` }
+function yellow(s: string) { return `${YELLOW}${s}${RESET}` }
+function bold(s: string)   { return `${BOLD}${s}${RESET}` }
+
+function usage(): void {
+  console.log(`Usage: git-worktree-organize <source> [destination]
+
+Convert a git repository into the canonical bare-hub worktree layout:
+
+  <dest>/.bare/    ← bare git repo
+  <dest>/.git      ← plain file: "gitdir: ./.bare"
+  <dest>/<branch>/ ← one directory per worktree
+
+Arguments:
+  source       Path to existing git repository
+  destination  Target hub directory (default: <parent>/<name>-bare)
+
+Options:
+  -h, --help   Show help`)
+}
+
+async function main(): Promise<void> {
+  const args = process.argv.slice(2)
+
+  if (args.length === 0 || args[0] === '-h' || args[0] === '--help') {
+    usage()
+    process.exit(0)
+  }
+
+  const sourcePath = args[0]
+  const destArg    = args[1]
+
+  // Resolve source early so we can display it
+  const source = resolve(sourcePath)
+
+  // Compute the destination the same way migrate() does
+  const dest = destArg
+    ? resolve(destArg)
+    : join(dirname(source), basename(source) + '-bare')
+
+  console.log(`\n${green('==>')} Reading worktrees from ${source}\n`)
+
+  // Detect repo type and list worktrees for display
+  const config = await detect(source)
+  const allWorktrees = await listWorktrees(source)
+  const worktrees = allWorktrees.filter(wt => !wt.isBare)
+
+  // Determine which branch is "main" (first worktree for standard repos)
+  let mainBranch: string | null = null
+  if (config.type === 'standard' && worktrees.length > 0) {
+    mainBranch = worktrees[0].branch
+  }
+
+  // Print worktrees table
+  console.log('Worktrees to migrate:')
+
+  // Find the longest branch name for alignment
+  const entries = worktrees.map(wt => {
+    const branch = wt.branch ?? `detached-${wt.head.slice(0, 8)}`
+    const safe   = sanitizeBranch(branch)
+    const isMain = branch === mainBranch
+    const destDir = join(dest, safe)
+    return { branch, isMain, destDir }
+  })
+
+  const maxNameLen = entries.reduce((m, e) => Math.max(m, e.branch.length), 0)
+
+  for (const { branch, isMain, destDir } of entries) {
+    const tag     = isMain ? yellow('[main]') : ''
+    const tagPad  = isMain ? `  (labeled ${yellow('[main]')})` : ''
+    // branch column width: bold branch name padded to maxNameLen + 2 brackets
+    const nameCol = bold(`[${branch}]`).padEnd(maxNameLen + 2 + BOLD.length + RESET.length)
+    // align the tag annotation
+    const annotation = isMain
+      ? `  (labeled ${yellow('[main]')})`.padEnd(18 + YELLOW.length + RESET.length)
+      : ''.padEnd(18)
+    void tag; void tagPad
+    console.log(`  ${nameCol}${annotation}  →  ${destDir}`)
+  }
+
+  console.log()
+  console.log(`Hub destination: ${bold(dest)}  (bare repo at ${dest}/.bare)`)
+  console.log()
+
+  // Interactive confirmation
+  process.stdout.write('Proceed? [y/N] ')
+  const ans = await new Promise<string>(resolve => {
+    process.stdin.setEncoding('utf8')
+    process.stdin.once('data', chunk => resolve(chunk.toString().trim()))
+  })
+  process.stdin.destroy()
+
+  if (!/^[Yy]$/.test(ans)) {
+    console.log('Aborted.')
+    process.exit(0)
+  }
+
+  console.log()
+
+  // Run migration
+  const hubPath = await migrate(config, { source: sourcePath, dest: destArg ?? '' })
+
+  // Verify
+  console.log(`${green('==>')} Verifying with git worktree list...`)
+  const verifyOutput = await $`git -C ${hubPath} worktree list`.text()
+  console.log(verifyOutput)
+
+  console.log(`Done! Hub: ${hubPath}`)
+  console.log()
+
+  // Determine main branch name for the useful commands hint
+  const mainSafe = mainBranch ? sanitizeBranch(mainBranch) : (entries[0]?.branch ? sanitizeBranch(entries[0].branch) : '')
+
+  console.log('Useful commands:')
+  console.log(`  git -C ${hubPath} worktree list`)
+  if (mainSafe) {
+    console.log(`  git -C ${hubPath}/${mainSafe} log --oneline -5`)
+  }
+}
+
+main().catch(err => {
+  process.stderr.write(`error: ${err.message}\n`)
+  process.exit(1)
+})