gentle-agent-extensions 1.0.1 → 1.2.0

package/scripts/install.sh

@@ -1,206 +0,0 @@
-#!/usr/bin/env bash
-# install.sh - Install gentle-agent-extensions
-#
-# This script sets up the project and configures the Pi extension.
-# It supports multiple installation profiles:
-#   - pi (default): Standard Pi installation at ~/.pi/agent
-#   - gentle-shell: Isolated Gentle Shell at ~/.local/share/gentle-shell/agent
-#   - gentle-shell-linked: Gentle Shell with --link at ~/.pi/agent
-
-set -euo pipefail
-
-SCRIPT_DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
-PROJECT_ROOT="$(cd "${SCRIPT_DIR}/.." && pwd)"
-
-# Colors for output
-RED='\033[0;31m'
-GREEN='\033[0;32m'
-YELLOW='\033[1;33m'
-BLUE='\033[0;34m'
-NC='\033[0m' # No Color
-
-log_info() { echo -e "${BLUE}[INFO]${NC} $*"; }
-log_success() { echo -e "${GREEN}[SUCCESS]${NC} $*"; }
-log_warn() { echo -e "${YELLOW}[WARN]${NC} $*"; }
-log_error() { echo -e "${RED}[ERROR]${NC} $*"; }
-
-usage() {
-	cat <<EOF
-Usage: $0 [OPTIONS]
-
-Install gentle-agent-extensions for Pi / Gentle Pi.
-
-Options:
-  --profile PROFILE    Installation profile: pi, gentle-shell, gentle-shell-linked (default: pi)
-  --agent-home PATH    Explicit agent home directory (overrides profile)
-  --dry-run            Show what would be done without making changes
-  --force              Overwrite existing extension file
-  -h, --help           Show this help
-
-Examples:
-  $0                              # Install for standard Pi
-  $0 --profile gentle-shell       # Install for isolated Gentle Shell
-  $0 --agent-home ~/.pi/agent     # Explicit agent home
-  $0 --dry-run                    # Preview changes
-EOF
-}
-
-PROFILE="pi"
-AGENT_HOME=""
-DRY_RUN=false
-FORCE=false
-
-while [[ $# -gt 0 ]]; do
-	case $1 in
-		--profile)
-			PROFILE="$2"
-			shift 2
-			;;
-		--agent-home)
-			AGENT_HOME="$2"
-			shift 2
-			;;
-		--dry-run)
-			DRY_RUN=true
-			shift
-			;;
-		--force)
-			FORCE=true
-			shift
-			;;
-		-h|--help)
-			usage
-			exit 0
-			;;
-		*)
-			log_error "Unknown option: $1"
-			usage
-			exit 1
-			;;
-	esac
-done
-
-# Determine agent home based on profile
-if [[ -z "$AGENT_HOME" ]]; then
-	case "$PROFILE" in
-		pi)
-			AGENT_HOME="${HOME}/.pi/agent"
-			;;
-		gentle-shell)
-			AGENT_HOME="${HOME}/.local/share/gentle-shell/agent"
-			;;
-		gentle-shell-linked)
-			AGENT_HOME="${HOME}/.pi/agent"
-			;;
-		*)
-			log_error "Unknown profile: $PROFILE"
-			exit 1
-			;;
-	esac
-fi
-
-EXTENSION_SOURCE="${PROJECT_ROOT}/extensions/gentle-agent-extensions.ts"
-EXTENSION_TARGET="${AGENT_HOME}/extensions/gentle-agent-extensions.ts"
-
-log_info "Installing gentle-agent-extensions"
-log_info "Profile: $PROFILE"
-log_info "Agent home: $AGENT_HOME"
-log_info "Project root: $PROJECT_ROOT"
-
-if [[ "$DRY_RUN" == "true" ]]; then
-	log_warn "DRY RUN - no changes will be made"
-fi
-
-# Check source extension exists
-if [[ ! -f "$EXTENSION_SOURCE" ]]; then
-	log_error "Extension source not found: $EXTENSION_SOURCE"
-	exit 1
-fi
-
-# Create agent home extensions directory
-if [[ "$DRY_RUN" == "false" ]]; then
-	mkdir -p "$(dirname "$EXTENSION_TARGET")"
-fi
-
-# Check if extension already exists
-if [[ -f "$EXTENSION_TARGET" && "$FORCE" == "false" && "$DRY_RUN" == "false" ]]; then
-	log_warn "Extension already exists at $EXTENSION_TARGET"
-	log_warn "Use --force to overwrite or remove it first"
-	exit 1
-fi
-
-# Copy extension
-if [[ "$DRY_RUN" == "true" ]]; then
-	log_info "Would copy: $EXTENSION_SOURCE -> $EXTENSION_TARGET"
-else
-	cp "$EXTENSION_SOURCE" "$EXTENSION_TARGET"
-	log_success "Extension installed to $EXTENSION_TARGET"
-fi
-
-# Create project agent directories
-PROJECT_AGENTS_DIR="${PROJECT_ROOT}/.pi/agents"
-PROJECT_SUBAGENTS_DIR="${PROJECT_ROOT}/.pi/subagents"
-
-if [[ "$DRY_RUN" == "true" ]]; then
-	log_info "Would create directories: $PROJECT_AGENTS_DIR, $PROJECT_SUBAGENTS_DIR"
-else
-	mkdir -p "$PROJECT_AGENTS_DIR" "$PROJECT_SUBAGENTS_DIR"
-	log_success "Created project agent directories"
-fi
-
-# Initialize manifest if not exists
-MANIFEST="${PROJECT_ROOT}/.manifest.json"
-if [[ ! -f "$MANIFEST" ]]; then
-	if [[ "$DRY_RUN" == "true" ]]; then
-		log_info "Would create manifest: $MANIFEST"
-	else
-		cat > "$MANIFEST" <<MANIFEST_EOF
-{
-  "version": "1.0",
-  "description": "Manifest of files managed by gentle-agent-extensions",
-  "managedPaths": {
-    "extensions": ["extensions/gentle-agent-extensions.ts"],
-    "agents": [],
-    "routing": [],
-    "overlays": [],
-    "skills": [],
-    "scripts": [],
-    "assets": []
-  },
-  "installProfiles": {
-    "$PROFILE": { "agentHome": "$AGENT_HOME" }
-  }
-}
-MANIFEST_EOF
-		log_success "Created manifest: $MANIFEST"
-	fi
-else
-	log_info "Manifest already exists: $MANIFEST"
-fi
-
-# Add extension to Pi settings if not already present
-SETTINGS_FILE="${AGENT_HOME}/settings.json"
-if [[ "$DRY_RUN" == "false" ]]; then
-	if [[ -f "$SETTINGS_FILE" ]]; then
-		# Check if extension is already in settings
-		if ! grep -q "gentle-agent-extensions" "$SETTINGS_FILE"; then
-			log_warn "Extension not in Pi settings. Add it manually or run:"
-			log_warn "  pi install file:$PROJECT_ROOT"
-			log_warn "Or add to $SETTINGS_FILE:"
-			log_warn '  { "packages": [{ "source": "file:'"$PROJECT_ROOT"'" }] }'
-		else
-			log_success "Extension already configured in Pi settings"
-		fi
-	else
-		log_warn "Pi settings not found at $SETTINGS_FILE"
-		log_warn "Run 'pi install file:$PROJECT_ROOT' to register the extension"
-	fi
-fi
-
-log_success "Installation complete!"
-log_info ""
-log_info "Next steps:"
-log_info "  1. Register the extension with Pi: pi install file:$PROJECT_ROOT"
-log_info "  2. Run sync: $PROJECT_ROOT/scripts/sync.sh"
-log_info "  3. Verify: $PROJECT_ROOT/scripts/doctor.sh"
-log_info "  4. Start Pi and run /gentle-extensions:status"

package/scripts/sync.sh

@@ -1,513 +0,0 @@
-#!/usr/bin/env bash
-# sync.sh - Synchronize gentle-agent-extensions with active Pi profile
-#
-# This script synchronizes custom agents, overlays, routing, skills, and MCP servers
-# with the active Pi installation. It is idempotent and supports dry-run/check modes.
-
-set -euo pipefail
-
-SCRIPT_DIR="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)"
-PROJECT_ROOT="$(cd "${SCRIPT_DIR}/.." && pwd)"
-
-# Colors
-RED='\033[0;31m'
-GREEN='\033[0;32m'
-YELLOW='\033[1;33m'
-BLUE='\033[0;34m'
-NC='\033[0m'
-
-log_info() { echo -e "${BLUE}[INFO]${NC} $*"; }
-log_success() { echo -e "${GREEN}[SUCCESS]${NC} $*"; }
-log_warn() { echo -e "${YELLOW}[WARN]${NC} $*"; }
-log_error() { echo -e "${RED}[ERROR]${NC} $*"; }
-
-usage() {
-	cat <<EOF
-Usage: $0 [OPTIONS]
-
-Synchronize gentle-agent-extensions with the active Pi profile.
-
-Options:
-  --profile PROFILE    Installation profile: pi, gentle-shell, gentle-shell-linked (default: pi)
-  --agent-home PATH    Explicit agent home directory (overrides profile)
-  --dry-run            Show what would be done without making changes
-  --check              Validate configuration and report issues (exit code 0 if ok, 1 if issues)
-  -h, --help           Show this help
-
-Examples:
-  $0                      # Full sync
-  $0 --dry-run            # Preview changes
-  $0 --check              # Validate only
-  $0 --profile gentle-shell
-EOF
-}
-
-PROFILE="pi"
-AGENT_HOME=""
-DRY_RUN=false
-CHECK_MODE=false
-
-while [[ $# -gt 0 ]]; do
-	case $1 in
-		--profile)
-			PROFILE="$2"
-			shift 2
-			;;
-		--agent-home)
-			AGENT_HOME="$2"
-			shift 2
-			;;
-		--dry-run)
-			DRY_RUN=true
-			shift
-			;;
-		--check)
-			CHECK_MODE=true
-			shift
-			;;
-		-h|--help)
-			usage
-			exit 0
-			;;
-		*)
-			log_error "Unknown option: $1"
-			usage
-			exit 1
-			;;
-	esac
-done
-
-# Determine agent home
-if [[ -z "$AGENT_HOME" ]]; then
-	case "$PROFILE" in
-		pi) AGENT_HOME="${HOME}/.pi/agent" ;;
-		gentle-shell) AGENT_HOME="${HOME}/.local/share/gentle-shell/agent" ;;
-		gentle-shell-linked) AGENT_HOME="${HOME}/.pi/agent" ;;
-		*) log_error "Unknown profile: $PROFILE"; exit 1 ;;
-	esac
-fi
-
-log_info "Syncing gentle-agent-extensions"
-log_info "Profile: $PROFILE"
-log_info "Agent home: $AGENT_HOME"
-log_info "Project root: $PROJECT_ROOT"
-
-if [[ "$DRY_RUN" == "true" ]]; then
-	log_warn "DRY RUN mode - no changes will be made"
-fi
-
-if [[ "$CHECK_MODE" == "true" ]]; then
-	log_info "CHECK mode - validation only"
-fi
-
-# Track changes and issues
-CHANGES=0
-ISSUES=0
-WARNINGS=0
-
-# Source directories
-AGENTS_SRC="${PROJECT_ROOT}/agents"
-OVERLAYS_SRC="${PROJECT_ROOT}/overlays"
-ROUTING_SRC="${PROJECT_ROOT}/routing"
-SKILLS_SRC="${PROJECT_ROOT}/skills"
-MCP_SRC="${PROJECT_ROOT}/mcp"
-
-# Target directories
-AGENT_HOME_EXTENSIONS="${AGENT_HOME}/extensions"
-PROJECT_AGENTS_DIR="${PROJECT_ROOT}/.pi/agents"
-PROJECT_SUBAGENTS_DIR="${PROJECT_ROOT}/.pi/subagents"
-
-# Manifest
-MANIFEST="${PROJECT_ROOT}/.manifest.json"
-
-# Helper: read manifest
-read_manifest() {
-	if [[ -f "$MANIFEST" ]]; then
-		cat "$MANIFEST"
-	else
-		echo '{"version":"1.0","managedPaths":{}}'
-	fi
-}
-
-# Helper: write manifest
-write_manifest() {
-	if [[ "$DRY_RUN" == "false" && "$CHECK_MODE" == "false" ]]; then
-		echo "$1" > "$MANIFEST"
-	fi
-}
-
-# Helper: update manifest path list
-update_manifest_paths() {
-	local key="$1"
-	local paths_json="$2"
-	local manifest
-	manifest=$(read_manifest)
-	if command -v jq &> /dev/null; then
-		echo "$manifest" | jq --arg key "$key" --argjson paths "$paths_json" '.managedPaths[$key] = $paths'
-	else
-		log_warn "jq not available, manifest not updated (install jq for full manifest support)"
-		echo "$manifest"
-	fi
-}
-
-# 1. Validate project structure
-log_info "Validating project structure..."
-
-for dir in "$AGENTS_SRC" "$OVERLAYS_SRC" "$ROUTING_SRC" "$SKILLS_SRC" "$MCP_SRC"; do
-	if [[ ! -d "$dir" ]]; then
-		log_warn "Directory missing: $dir"
-		((WARNINGS++))
-	fi
-done
-
-# 2. Sync agents
-log_info "Syncing agents..."
-
-if [[ -d "$AGENTS_SRC" ]]; then
-	if [[ "$DRY_RUN" == "false" && "$CHECK_MODE" == "false" ]]; then
-		mkdir -p "$PROJECT_AGENTS_DIR"
-	fi
-
-	MANAGED_AGENTS=()
-
-	for agent_file in "$AGENTS_SRC"/*.md; do
-		[[ -f "$agent_file" ]] || continue
-
-		agent_name=$(basename "$agent_file" .md)
-		target_file="${PROJECT_AGENTS_DIR}/${agent_name}.md"
-
-		if ! head -20 "$agent_file" | grep -q "^---$"; then
-			log_warn "Agent $agent_name: missing frontmatter delimiter"
-			((WARNINGS++))
-		fi
-
-		if ! grep -q "^name:" "$agent_file"; then
-			log_warn "Agent $agent_name: missing 'name' in frontmatter"
-			((WARNINGS++))
-		fi
-
-		if [[ "$DRY_RUN" == "true" ]]; then
-			if [[ -f "$target_file" ]]; then
-				if ! cmp -s "$agent_file" "$target_file"; then
-					log_info "Would update: $agent_name -> $target_file"
-					((CHANGES++))
-				else
-					log_info "Unchanged: $agent_name"
-				fi
-			else
-				log_info "Would create: $agent_name -> $target_file"
-				((CHANGES++))
-			fi
-		elif [[ "$CHECK_MODE" == "false" ]]; then
-			if [[ -f "$target_file" ]]; then
-				if ! cmp -s "$agent_file" "$target_file"; then
-					cp "$agent_file" "$target_file"
-					log_success "Updated agent: $agent_name"
-					((CHANGES++))
-				else
-					log_info "Unchanged: $agent_name"
-				fi
-			else
-				cp "$agent_file" "$target_file"
-				log_success "Created agent: $agent_name"
-				((CHANGES++))
-			fi
-		fi
-
-		MANAGED_AGENTS+=("$target_file")
-	done
-
-	if [[ "$DRY_RUN" == "false" && "$CHECK_MODE" == "false" ]]; then
-		paths_json=$(printf '"%s",' "${MANAGED_AGENTS[@]}" | sed 's/,$//')
-		paths_json="[$paths_json]"
-		new_manifest=$(update_manifest_paths "agents" "$paths_json")
-		write_manifest "$new_manifest"
-	fi
-else
-	log_warn "Agents source directory not found: $AGENTS_SRC"
-	((WARNINGS++))
-fi
-
-# 3. Validate overlays
-log_info "Validating overlays..."
-
-if [[ -d "$OVERLAYS_SRC" ]]; then
-	for overlay_file in "$OVERLAYS_SRC"/*.overlay.md; do
-		[[ -f "$overlay_file" ]] || continue
-
-		overlay_name=$(basename "$overlay_file" .overlay.md)
-
-		if ! head -20 "$overlay_file" | grep -q "^---$"; then
-			log_warn "Overlay $overlay_name: missing frontmatter delimiter"
-			((WARNINGS++))
-		fi
-
-		if ! grep -q "^target:" "$overlay_file"; then
-			log_error "Overlay $overlay_name: missing 'target' in frontmatter"
-			((ISSUES++))
-		fi
-
-		target=$(grep "^target:" "$overlay_file" | head -1 | sed 's/^target: *//')
-		log_info "Overlay validated: $overlay_name -> target: $target"
-	done
-else
-	log_warn "Overlays source directory not found: $OVERLAYS_SRC"
-	((WARNINGS++))
-fi
-
-# 4. Validate routing
-log_info "Validating routing..."
-
-if [[ -d "$ROUTING_SRC" ]]; then
-	for routing_file in "$ROUTING_SRC"/*.md; do
-		[[ -f "$routing_file" ]] || continue
-
-		routing_name=$(basename "$routing_file" .md)
-
-		if ! grep -q "^agent:" "$routing_file"; then
-			log_warn "Routing $routing_name: missing 'agent' in frontmatter"
-			((WARNINGS++))
-		fi
-
-		agent=$(grep "^agent:" "$routing_file" | head -1 | sed 's/^agent: *//')
-		log_info "Routing validated: $routing_name -> agent: $agent"
-	done
-else
-	log_warn "Routing source directory not found: $ROUTING_SRC"
-	((WARNINGS++))
-fi
-
-# 5. Validate skills
-log_info "Validating skills..."
-
-if [[ -d "$SKILLS_SRC" ]]; then
-	for skill_dir in "$SKILLS_SRC"/*/; do
-		[[ -d "$skill_dir" ]] || continue
-
-		skill_name=$(basename "$skill_dir")
-		skill_file="${skill_dir}SKILL.md"
-
-		if [[ ! -f "$skill_file" ]]; then
-			log_warn "Skill $skill_name: missing SKILL.md"
-			((WARNINGS++))
-			continue
-		fi
-
-		for section in "Activation Contract" "Hard Rules" "Decision Gates" "Execution Steps" "Output Contract" "References"; do
-			if ! grep -q "^## $section" "$skill_file"; then
-				log_warn "Skill $skill_name: missing section '$section'"
-				((WARNINGS++))
-			fi
-		done
-
-		if ! head -10 "$skill_file" | grep -q "^---$"; then
-			log_warn "Skill $skill_name: missing frontmatter"
-			((WARNINGS++))
-		fi
-
-		log_info "Skill validated: $skill_name"
-	done
-else
-	log_warn "Skills source directory not found: $SKILLS_SRC"
-	((WARNINGS++))
-fi
-
-# 6. Validate MCP server definitions
-log_info "Validating MCP servers..."
-
-if [[ -d "$MCP_SRC" ]]; then
-	for mcp_file in "$MCP_SRC"/*.mcp.json; do
-		[[ -f "$mcp_file" ]] || continue
-
-		mcp_name=$(basename "$mcp_file" .mcp.json)
-
-		if ! command -v jq &> /dev/null; then
-			log_warn "MCP $mcp_name: jq not available, skipping JSON validation"
-		else
-			if ! jq empty "$mcp_file" 2>/dev/null; then
-				log_error "MCP $mcp_name: invalid JSON syntax"
-				((ISSUES++))
-				continue
-			fi
-
-			name=$(jq -r '.name // empty' "$mcp_file")
-			description=$(jq -r '.description // empty' "$mcp_file")
-			transport=$(jq -r '.transport // empty' "$mcp_file")
-
-			if [[ -z "$name" ]]; then
-				log_error "MCP $mcp_name: missing 'name' field"
-				((ISSUES++))
-			fi
-			if [[ -z "$description" ]]; then
-				log_error "MCP $mcp_name: missing 'description' field"
-				((ISSUES++))
-			fi
-			if [[ -z "$transport" ]]; then
-				log_error "MCP $mcp_name: missing 'transport' field"
-				((ISSUES++))
-			fi
-
-			if [[ "$transport" == "stdio" ]]; then
-				command=$(jq -r '.command // empty' "$mcp_file")
-				if [[ -z "$command" ]]; then
-					log_error "MCP $mcp_name: stdio transport requires 'command' field"
-					((ISSUES++))
-				fi
-			elif [[ "$transport" == "http" ]]; then
-				url=$(jq -r '.url // empty' "$mcp_file")
-				if [[ -z "$url" ]]; then
-					log_error "MCP $mcp_name: http transport requires 'url' field"
-					((ISSUES++))
-				fi
-			else
-				log_error "MCP $mcp_name: transport must be 'stdio' or 'http'"
-				((ISSUES++))
-			fi
-
-			if [[ -n "$name" ]] && ! [[ "$name" =~ ^[A-Za-z0-9_-]+$ ]]; then
-				log_error "MCP $mcp_name: name must contain only letters, digits, _, and -"
-				((ISSUES++))
-			fi
-
-			if command -v jq &> /dev/null; then
-				env_keys=$(jq -r '.env | keys[]' "$mcp_file" 2>/dev/null || true)
-				for key in $env_keys; do
-					value=$(jq -r ".env[\"$key\"]" "$mcp_file")
-					if [[ -n "$value" ]] && ! [[ "$value" =~ ^\$\{ ]]; then
-						key_lower=$(echo "$key" | tr '[:upper:]' '[:lower:]')
-						if [[ "$key_lower" =~ (secret|token|key|password) ]]; then
-							log_warn "MCP $mcp_name: env '$key' may contain hardcoded secret (use \${VAR} syntax)"
-							((WARNINGS++))
-						fi
-					fi
-				done
-			fi
-
-			log_info "MCP validated: $mcp_name ($transport)"
-		fi
-	done
-else
-	log_warn "MCP source directory not found: $MCP_SRC"
-	((WARNINGS++))
-fi
-
-# 7. Check for duplicate agent names
-log_info "Checking for conflicts..."
-
-GLOBAL_AGENTS_DIRS=("$AGENT_HOME/agents" "$AGENT_HOME/subagents")
-declare -A GLOBAL_AGENTS
-
-for dir in "${GLOBAL_AGENTS_DIRS[@]}"; do
-	if [[ -d "$dir" ]]; then
-		for file in "$dir"/*.md; do
-			[[ -f "$file" ]] || continue
-			name=$(basename "$file" .md)
-			GLOBAL_AGENTS["$name"]="$dir"
-		done
-	fi
-done
-
-if [[ -d "$AGENTS_SRC" ]]; then
-	for agent_file in "$AGENTS_SRC"/*.md; do
-		[[ -f "$agent_file" ]] || continue
-		agent_name=$(basename "$agent_file" .md)
-		if [[ -n "${GLOBAL_AGENTS[$agent_name]:-}" ]]; then
-			log_warn "Project agent '$agent_name' shadows global agent in ${GLOBAL_AGENTS[$agent_name]}"
-			((WARNINGS++))
-		fi
-	done
-fi
-
-# 8. Check overlay targets exist
-log_info "Checking overlay targets..."
-if [[ -d "$OVERLAYS_SRC" ]]; then
-	for overlay_file in "$OVERLAYS_SRC"/*.overlay.md; do
-		[[ -f "$overlay_file" ]] || continue
-		target=$(grep "^target:" "$overlay_file" | head -1 | sed 's/^target: *//')
-		target=$(echo "$target" | xargs)
-
-		if [[ "$target" != "orchestrator" ]]; then
-			target_exists=false
-			if [[ -n "${GLOBAL_AGENTS[$target]:-}" ]]; then
-				target_exists=true
-			fi
-			if [[ -f "$AGENTS_SRC/${target}.md" ]]; then
-				target_exists=true
-			fi
-
-			if [[ "$target_exists" == "false" ]]; then
-				log_warn "Overlay targets unknown agent: $target (from $(basename "$overlay_file"))"
-				((WARNINGS++))
-			fi
-		fi
-	done
-fi
-
-# 9. Check MCP server name conflicts with mcp.json
-log_info "Checking MCP server name conflicts..."
-if [[ -d "$MCP_SRC" ]]; then
-	# Check user-level mcp.json
-	USER_MCP="${AGENT_HOME}/mcp.json"
-	if [[ -f "$USER_MCP" ]] && command -v jq &> /dev/null; then
-		for mcp_file in "$MCP_SRC"/*.mcp.json; do
-			[[ -f "$mcp_file" ]] || continue
-			name=$(jq -r '.name // empty' "$mcp_file")
-			if [[ -n "$name" ]] && jq -e ".mcpServers[\"$name\"]" "$USER_MCP" >/dev/null 2>&1; then
-				log_warn "MCP server '$name' also defined in user mcp.json (user config takes precedence)"
-				((WARNINGS++))
-			fi
-		done
-	fi
-
-	# Check project-level mcp.json
-	PROJECT_MCP="${PROJECT_ROOT}/.pi/mcp.json"
-	if [[ -f "$PROJECT_MCP" ]] && command -v jq &> /dev/null; then
-		for mcp_file in "$MCP_SRC"/*.mcp.json; do
-			[[ -f "$mcp_file" ]] || continue
-			name=$(jq -r '.name // empty' "$mcp_file")
-			if [[ -n "$name" ]] && jq -e ".mcpServers[\"$name\"]" "$PROJECT_MCP" >/dev/null 2>&1; then
-				log_warn "MCP server '$name' also defined in project .pi/mcp.json (project config takes precedence)"
-				((WARNINGS++))
-			fi
-		done
-	fi
-fi
-
-# 10. Verify extension is installed
-log_info "Verifying extension installation..."
-EXTENSION_TARGET="${AGENT_HOME_EXTENSIONS}/gentle-agent-extensions.ts"
-if [[ -f "$EXTENSION_TARGET" ]]; then
-	log_success "Extension found at $EXTENSION_TARGET"
-else
-	log_error "Extension not installed at $EXTENSION_TARGET"
-	log_error "Run install.sh first"
-	((ISSUES++))
-fi
-
-# Summary
-echo ""
-log_info "=== Sync Summary ==="
-log_info "Changes made: $CHANGES"
-log_info "Issues found: $ISSUES"
-log_info "Warnings: $WARNINGS"
-
-if [[ "$DRY_RUN" == "true" ]]; then
-	log_warn "DRY RUN - no actual changes made"
-fi
-
-if [[ "$CHECK_MODE" == "true" ]]; then
-	if [[ $ISSUES -gt 0 ]]; then
-		log_error "Check failed: $ISSUES issue(s) found"
-		exit 1
-	else
-		log_success "Check passed"
-		exit 0
-	fi
-fi
-
-if [[ $ISSUES -gt 0 ]]; then
-	log_error "Sync completed with $ISSUES issue(s)"
-	exit 1
-fi
-
-log_success "Sync completed successfully"