genoverse 3.2.0 → 4.0.0-beta1

package/dist/729.css

@@ -0,0 +1,315 @@
+.gv-control-panel-plugin table.gv {
+  position: relative;
+  margin-bottom: 30px;
+  border-collapse: separate;
+}
+
+.gv-control-panel-plugin table.gv td {
+  padding: 0;
+  color: white;
+  vertical-align: top;
+}
+
+.gv-control-panel-plugin .gv-panel {
+  height: 100%;
+  background-color: #5F8CB0;
+  border: 1px solid #1C5380;
+  box-shadow: 0 0 1px rgba(255, 255, 255, 0.4) inset, 0 1px 3px rgba(0, 0, 0, 0.1), -2px 0 2px rgba(0, 0, 0, 0.1);
+}
+
+.gv-control-panel-plugin .gv-panel div {
+  white-space: nowrap;
+}
+
+.gv-control-panel-plugin .gv-panel button {
+  background: none;
+  border: none;
+  border-bottom: 1px solid #1C5380;
+  color: #E2E9EF;
+  text-shadow: 0 1px 0 rgba(0, 0, 0, 0.75);
+  width: 30px;
+  height: 50px;
+  font-family: inherit;
+  font-size: 18px;
+  line-height: 20px;
+  padding: 2px;
+  margin: 0;
+}
+
+.gv-control-panel-plugin .gv-panel button:only-child {
+  width: 100%;
+}
+
+.gv-control-panel-plugin .gv-panel div.gv-button-set > button:not(:first-child) {
+  border-left: 1px solid #1C5380;
+}
+
+.gv-control-panel-plugin .gv-panel button.gv-button-large {
+  font-size: 25px;
+}
+
+.gv-control-panel-plugin .gv-panel div.gv-button-set:not(:first-child) > button {
+  box-shadow: 0 1px 1px rgba(255, 255, 255, 0.12) inset;
+}
+
+.gv-control-panel-plugin .gv-panel div.gv-button-set:last-child {
+  box-shadow: 0 1px 0 rgba(255, 255, 255, 0.12);
+}
+
+.gv-control-panel-plugin .gv-panel button:hover {
+  background-color: rgba(255, 255, 255, 0.1);
+  color: #FFFFFF;
+  cursor: pointer;
+}
+
+.gv-control-panel-plugin .gv-panel button:active,
+.gv-control-panel-plugin .gv-panel button.gv-active {
+  border-top: none;
+  background-color: rgba(6, 54, 95, 0.35);
+  box-shadow: 0 0 1px rgba(6, 54, 95, 0.8) inset !important;
+}
+
+.gv-control-panel-plugin .gv-panel-right {
+  background-image: -webkit-linear-gradient(left, #5F8CB0, #4A7496);
+  background-image: -moz-linear-gradient(left center, #5F8CB0, #4A7496);
+  border-radius: 0 5px 5px 0;
+  border-left: 0;
+}
+
+.gv-control-panel-plugin .gv-panel-right button.gv-wheel-zoom {
+  font-weight: bold;
+}
+
+.gv-control-panel-plugin .gv-panel-right button.gv-drag-select i {
+  border: 1px dashed #FFF;
+  padding: 0 5px;
+  box-shadow: 0px 0px 1px #FFF inset, 0px 1px 3px rgba(0, 0, 0, 0.1), 2px 2px rgba(0, 0, 0, 0.2);
+}
+
+.gv-control-panel-plugin .gv-panel-left {
+  background-image: -webkit-linear-gradient(right, #5F8CB0, #4A7496);
+  background-image: -moz-linear-gradient(right center, #5F8CB0, #4A7496);
+  border-radius: 5px 0 0 5px;
+  border-right: 0;
+}
+
+.gv-control-panel-plugin .gv-panel-left .gv-label-container {
+  border: 0;
+  box-shadow: none;
+  background: none;
+}
+
+.gv-control-panel-plugin td.gv-canvas-container {
+  border: 1px solid #000;
+}
+
+.gv-control-panel-plugin .gv-karyotype-container {
+  border-width: 0 0 1px!important;
+}
+
+.gv-control-panel-plugin .gv-canvas-container .gv-wrapper {
+  border: 0;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu {
+  top: 70px;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu .gv-close {
+  font-size: 20px;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu .gv-menu-content {
+  font-size: 13px;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu table {
+  margin: 0 0 10px;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu td {
+  padding: 5px 10px!important;
+  vertical-align: top;
+  width: 50%;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu tr:first-child td {
+  font-weight: bold;
+  white-space: nowrap;
+  padding: 5px 30px 5px 10px;
+  margin-bottom: 5px;
+  background: rgba(6, 54, 95, 0.35);
+  line-height: normal;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu tr:first-child td:last-child {
+  border-radius: 0 12px 0 0;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu tr td:first-child {
+  padding-right: 50px!important;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks.ui-sortable {
+  cursor: move;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks-instructions {
+  font-style: italic;
+  margin-bottom: 10px;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu .gv-remove-track,
+.gv-control-panel-plugin .gv-tracks-menu .gv-add-track {
+  font-size: 14px;
+  margin: 2px 5px 0 0;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu input {
+  margin-bottom: 10px;
+  width: 200px;
+}
+
+.gv-control-panel-plugin .gv-tracks-menu .gv-tracks-menu-reset {
+  font-style: italic;
+  margin-top: 10px;
+}
+
+.gv-control-panel-plugin .gv-tracks-library-category {
+  margin-bottom: 10px;
+}
+
+.gv-control-panel-plugin .gv-tracks-library-category:last-child {
+  margin-bottom: 0px;
+}
+
+.gv-control-panel-plugin .gv-tracks-library-category .gv-tracks-library-category-header {
+  font-weight: bold;
+}
+
+.gv-control-panel-plugin .gv-powered-by {
+  position: absolute;
+  right: 0;
+  bottom: -16px;
+  font-size: 10px;
+  color: black;
+}
+
+.gv-control-panel-plugin .gv-powered-by a {
+  font-weight: bold;
+}
+
+.tipsy { font-size: 10px; position: absolute; padding: 5px; z-index: 1000; }
+.tipsy-inner { background-color: #000; color: #FFF; max-width: 250px; padding: 5px 8px 4px 8px; text-align: center; font-family: Tahoma; font-size: 11px; }
+
+/* Rounded corners */
+.tipsy-inner { border-radius: 3px; -moz-border-radius: 3px; -webkit-border-radius: 3px; }
+
+.tipsy-arrow { position: absolute; width: 0; height: 0; line-height: 0; border: 5px dashed #000; }
+
+/* Rules to colour arrows */
+.tipsy-arrow-n { border-bottom-color: #000; }
+.tipsy-arrow-s { border-top-color: #000; }
+.tipsy-arrow-e { border-left-color: #000; }
+.tipsy-arrow-w { border-right-color: #000; }
+
+.tipsy-n  .tipsy-arrow { top: 0px; left: 50%; margin-left: -5px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent; }
+.tipsy-nw .tipsy-arrow { top: 0; left: 10px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent;}
+.tipsy-ne .tipsy-arrow { top: 0; right: 10px; border-bottom-style: solid; border-top: none;  border-left-color: transparent; border-right-color: transparent;}
+.tipsy-s  .tipsy-arrow { bottom: 0; left: 50%; margin-left: -5px; border-top-style: solid; border-bottom: none;  border-left-color: transparent; border-right-color: transparent; }
+.tipsy-sw .tipsy-arrow { bottom: 0; left: 10px; border-top-style: solid; border-bottom: none;  border-left-color: transparent; border-right-color: transparent; }
+.tipsy-se .tipsy-arrow { bottom: 0; right: 10px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }
+.tipsy-e  .tipsy-arrow { right: 0; top: 50%; margin-top: -5px; border-left-style: solid; border-right: none; border-top-color: transparent; border-bottom-color: transparent; }
+.tipsy-w  .tipsy-arrow { left: 0; top: 50%; margin-top: -5px; border-right-style: solid; border-left: none; border-top-color: transparent; border-bottom-color: transparent; }
+
+.gv-wrapper-tooltip { position: absolute; left: 50%; top: 60px; }
+
+.genoverse .tooltip { z-index: 1000; }
+.gv-karyotype-plugin .gv-karyotype-container {
+  height: 50px;
+  overflow: hidden;
+  box-shadow: inset 0 0 33px -7px rgba(24, 36, 56, 0.97);
+  border: 1px solid #000;
+  background-color: #FFF;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .gv-wrapper {
+  border: 0;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .gv-chromosome {
+  margin: 15px;
+  position: relative;
+  height: calc(100% - 30px);
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .gv-image-container {
+  box-shadow: 0 0 33px -7px #CCC inset;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint-wrapper {
+  position: relative;
+  height: 70%;
+  top: -85%;
+  margin: 0 15px;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint {
+  background-color: rgba(222, 84, 35, 0.37);
+  border: 1px dashed #E6380D;
+  box-shadow: 0 0 3px 2px rgba(237, 237, 237, 0.4) inset, 0 0 4px 0 rgba(116, 116, 116, 0.7);
+  height: 100%;
+  position: absolute;
+  z-index: 50;
+  cursor: grab;
+  cursor: -moz-grab;
+  cursor: -webkit-grab;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .ui-resizable-e {
+  cursor: e-resize;
+  height: 100%;
+  right: -5px;
+  top: 0;
+  width: 7px;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .ui-resizable-w {
+  cursor: w-resize;
+  height: 100%;
+  left: -5px;
+  top: 0;
+  width: 7px;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .ui-resizable-handle {
+  display: block;
+  font-size: 0.1px;
+  position: absolute;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container {
+  background: transparent;
+  box-shadow: none;
+  border: none;
+  cursor: default;
+  width: auto;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container .gv-name {
+  color: #000;
+  float: none;
+  left: 0 !important;
+  margin: 0;
+  overflow: auto;
+  position: relative;
+  text-shadow: none;
+  width: 100%;
+}
+
+.gv-karyotype-plugin .gv-karyotype-container.gv-no-label .gv-wrapper {
+  margin-left: 0;
+}
+
+
+/*# sourceMappingURL=729.css.map*/

package/dist/729.css.map

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table.gv {\n  position: relative;\n  margin-bottom: 30px;\n  border-collapse: separate;\n}\n\n.gv-control-panel-plugin table.gv td {\n  padding: 0;\n  color: white;\n  vertical-align: top;\n}\n\n.gv-control-panel-plugin .gv-panel {\n  height: 100%;\n  background-color: #5F8CB0;\n  border: 1px solid #1C5380;\n  box-shadow: 0 0 1px rgba(255, 255, 255, 0.4) inset, 0 1px 3px rgba(0, 0, 0, 0.1), -2px 0 2px rgba(0, 0, 0, 0.1);\n}\n\n.gv-control-panel-plugin .gv-panel div {\n  white-space: nowrap;\n}\n\n.gv-control-panel-plugin .gv-panel button {\n  background: none;\n  border: none;\n  border-bottom: 1px solid #1C5380;\n  color: #E2E9EF;\n  text-shadow: 0 1px 0 rgba(0, 0, 0, 0.75);\n  width: 30px;\n  height: 50px;\n  font-family: inherit;\n  font-size: 18px;\n  line-height: 20px;\n  padding: 2px;\n  margin: 0;\n}\n\n.gv-control-panel-plugin .gv-panel button:only-child {\n  width: 100%;\n}\n\n.gv-control-panel-plugin .gv-panel div.gv-button-set > button:not(:first-child) {\n  border-left: 1px solid #1C5380;\n}\n\n.gv-control-panel-plugin .gv-panel button.gv-button-large {\n  font-size: 25px;\n}\n\n.gv-control-panel-plugin .gv-panel div.gv-button-set:not(:first-child) > button {\n  box-shadow: 0 1px 1px rgba(255, 255, 255, 0.12) inset;\n}\n\n.gv-control-panel-plugin .gv-panel div.gv-button-set:last-child {\n  box-shadow: 0 1px 0 rgba(255, 255, 255, 0.12);\n}\n\n.gv-control-panel-plugin .gv-panel button:hover {\n  background-color: rgba(255, 255, 255, 0.1);\n  color: #FFFFFF;\n  cursor: pointer;\n}\n\n.gv-control-panel-plugin .gv-panel button:active,\n.gv-control-panel-plugin .gv-panel button.gv-active {\n  border-top: none;\n  background-color: rgba(6, 54, 95, 0.35);\n  box-shadow: 0 0 1px rgba(6, 54, 95, 0.8) inset !important;\n}\n\n.gv-control-panel-plugin .gv-panel-right {\n  background-image: -webkit-linear-gradient(left, #5F8CB0, #4A7496);\n  background-image: -moz-linear-gradient(left center, #5F8CB0, #4A7496);\n  border-radius: 0 5px 5px 0;\n  border-left: 0;\n}\n\n.gv-control-panel-plugin .gv-panel-right button.gv-wheel-zoom {\n  font-weight: bold;\n}\n\n.gv-control-panel-plugin .gv-panel-right button.gv-drag-select i {\n  border: 1px dashed #FFF;\n  padding: 0 5px;\n  box-shadow: 0px 0px 1px #FFF inset, 0px 1px 3px rgba(0, 0, 0, 0.1), 2px 2px rgba(0, 0, 0, 0.2);\n}\n\n.gv-control-panel-plugin .gv-panel-left {\n  background-image: -webkit-linear-gradient(right, #5F8CB0, #4A7496);\n  background-image: -moz-linear-gradient(right center, #5F8CB0, #4A7496);\n  border-radius: 5px 0 0 5px;\n  border-right: 0;\n}\n\n.gv-control-panel-plugin .gv-panel-left .gv-label-container {\n  border: 0;\n  box-shadow: none;\n  background: none;\n}\n\n.gv-control-panel-plugin td.gv-canvas-container {\n  border: 1px solid #000;\n}\n\n.gv-control-panel-plugin .gv-karyotype-container {\n  border-width: 0 0 1px!important;\n}\n\n.gv-control-panel-plugin .gv-canvas-container .gv-wrapper {\n  border: 0;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu {\n  top: 70px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-close {\n  font-size: 20px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-menu-content {\n  font-size: 13px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu table {\n  margin: 0 0 10px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu td {\n  padding: 5px 10px!important;\n  vertical-align: top;\n  width: 50%;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu tr:first-child td {\n  font-weight: bold;\n  white-space: nowrap;\n  padding: 5px 30px 5px 10px;\n  margin-bottom: 5px;\n  background: rgba(6, 54, 95, 0.35);\n  line-height: normal;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu tr:first-child td:last-child {\n  border-radius: 0 12px 0 0;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu tr td:first-child {\n  padding-right: 50px!important;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks.ui-sortable {\n  cursor: move;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-current-tracks-instructions {\n  font-style: italic;\n  margin-bottom: 10px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-remove-track,\n.gv-control-panel-plugin .gv-tracks-menu .gv-add-track {\n  font-size: 14px;\n  margin: 2px 5px 0 0;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu input {\n  margin-bottom: 10px;\n  width: 200px;\n}\n\n.gv-control-panel-plugin .gv-tracks-menu .gv-tracks-menu-reset {\n  font-style: italic;\n  margin-top: 10px;\n}\n\n.gv-control-panel-plugin .gv-tracks-library-category {\n  margin-bottom: 10px;\n}\n\n.gv-control-panel-plugin .gv-tracks-library-category:last-child {\n  margin-bottom: 0px;\n}\n\n.gv-control-panel-plugin .gv-tracks-library-category .gv-tracks-library-category-header {\n  font-weight: bold;\n}\n\n.gv-control-panel-plugin .gv-powered-by {\n  position: absolute;\n  right: 0;\n  bottom: -16px;\n  font-size: 10px;\n  color: black;\n}\n\n.gv-control-panel-plugin .gv-powered-by a {\n  font-weight: bold;\n}\n",".tipsy { font-size: 10px; position: absolute; padding: 5px; z-index: 1000; }\n.tipsy-inner { background-color: #000; color: #FFF; max-width: 250px; padding: 5px 8px 4px 8px; text-align: center; font-family: Tahoma; font-size: 11px; }\n\n/* Rounded corners */\n.tipsy-inner { border-radius: 3px; -moz-border-radius: 3px; -webkit-border-radius: 3px; }\n\n.tipsy-arrow { position: absolute; width: 0; height: 0; line-height: 0; border: 5px dashed #000; }\n\n/* Rules to colour arrows */\n.tipsy-arrow-n { border-bottom-color: #000; }\n.tipsy-arrow-s { border-top-color: #000; }\n.tipsy-arrow-e { border-left-color: #000; }\n.tipsy-arrow-w { border-right-color: #000; }\n\n.tipsy-n  .tipsy-arrow { top: 0px; left: 50%; margin-left: -5px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent; }\n.tipsy-nw .tipsy-arrow { top: 0; left: 10px; border-bottom-style: solid; border-top: none; border-left-color: transparent; border-right-color: transparent;}\n.tipsy-ne .tipsy-arrow { top: 0; right: 10px; border-bottom-style: solid; border-top: none;  border-left-color: transparent; border-right-color: transparent;}\n.tipsy-s  .tipsy-arrow { bottom: 0; left: 50%; margin-left: -5px; border-top-style: solid; border-bottom: none;  border-left-color: transparent; border-right-color: transparent; }\n.tipsy-sw .tipsy-arrow { bottom: 0; left: 10px; border-top-style: solid; border-bottom: none;  border-left-color: transparent; border-right-color: transparent; }\n.tipsy-se .tipsy-arrow { bottom: 0; right: 10px; border-top-style: solid; border-bottom: none; border-left-color: transparent; border-right-color: transparent; }\n.tipsy-e  .tipsy-arrow { right: 0; top: 50%; margin-top: -5px; border-left-style: solid; border-right: none; border-top-color: transparent; border-bottom-color: transparent; }\n.tipsy-w  .tipsy-arrow { left: 0; top: 50%; margin-top: -5px; border-right-style: solid; border-left: none; border-top-color: transparent; border-bottom-color: transparent; }\n\n.gv-wrapper-tooltip { position: absolute; left: 50%; top: 60px; }\n\n.genoverse .tooltip { z-index: 1000; }","@import url('./tooltips.css');\n\n.gv-karyotype-plugin .gv-karyotype-container {\n  height: 50px;\n  overflow: hidden;\n  box-shadow: inset 0 0 33px -7px rgba(24, 36, 56, 0.97);\n  border: 1px solid #000;\n  background-color: #FFF;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-wrapper {\n  border: 0;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-chromosome {\n  margin: 15px;\n  position: relative;\n  height: calc(100% - 30px);\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-image-container {\n  box-shadow: 0 0 33px -7px #CCC inset;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint-wrapper {\n  position: relative;\n  height: 70%;\n  top: -85%;\n  margin: 0 15px;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-karyotype-viewpoint {\n  background-color: rgba(222, 84, 35, 0.37);\n  border: 1px dashed #E6380D;\n  box-shadow: 0 0 3px 2px rgba(237, 237, 237, 0.4) inset, 0 0 4px 0 rgba(116, 116, 116, 0.7);\n  height: 100%;\n  position: absolute;\n  z-index: 50;\n  cursor: grab;\n  cursor: -moz-grab;\n  cursor: -webkit-grab;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .ui-resizable-e {\n  cursor: e-resize;\n  height: 100%;\n  right: -5px;\n  top: 0;\n  width: 7px;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .ui-resizable-w {\n  cursor: w-resize;\n  height: 100%;\n  left: -5px;\n  top: 0;\n  width: 7px;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .ui-resizable-handle {\n  display: block;\n  font-size: 0.1px;\n  position: absolute;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container {\n  background: transparent;\n  box-shadow: none;\n  border: none;\n  cursor: default;\n  width: auto;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container .gv-chromosome .gv-label-container .gv-name {\n  color: #000;\n  float: none;\n  left: 0 !important;\n  margin: 0;\n  overflow: auto;\n  position: relative;\n  text-shadow: none;\n  width: 100%;\n}\n\n.gv-karyotype-plugin .gv-karyotype-container.gv-no-label .gv-wrapper {\n  margin-left: 0;\n}\n"],"names":[],"sourceRoot":""}

package/dist/804.genoverse.js

@@ -0,0 +1,2 @@
+"use strict";(self.webpackChunkgenoverse=self.webpackChunkgenoverse||[]).push([[804],{1804:function(t,e,a){a.r(e);var n=a(4394);e.default={controlPanel:function(t){var e=this.jQuery;this.controls=[{name:"Scroll left and right by pressing and holding these buttons",buttons:[{name:"Scroll left",icon:'<i class="fas fa-chevron-left"></i>',class:"gv-scroll-left"},{name:"Scroll right",icon:'<i class="fas fa-chevron-right"></i>',class:"gv-scroll-right"}],init:function(t){var a=e(this);a.find(".gv-scroll-left, .gv-scroll-right").on({mousedown:function(){t.startDragScroll()},mouseup:function(){t.stopDragScroll()}}),a.find(".gv-scroll-left").mousehold(50,(function(){t.move(t.scrollDelta)})),a.find(".gv-scroll-right").mousehold(50,(function(){t.move(-t.scrollDelta)}))}},{name:"Zoom-in and zoom-out",buttons:[{name:"Zoom in",icon:'<i class="fas fa-search-plus"></i>',class:"gv-zoom-in",action:function(t){t.zoomIn()}},{name:"Zoom out",icon:'<i class="fas fa-search-minus"></i>',class:"gv-zoom-out",action:function(t){t.zoomOut()}}]},{name:"Toggle your mouse drag action between scroll left/right and select region",buttons:[{name:"Mouse drag action to scroll the browser left or right",icon:'<i class="fas fa-arrows-alt-h"></i>',class:"gv-drag-scroll",action:function(t){t.setDragAction("scroll"),e(this).addClass("gv-active").siblings().removeClass("gv-active")}},{name:"Mouse drag action to select a region",icon:"<i></i>",class:"gv-drag-select",action:function(t){t.setDragAction("select"),e(this).addClass("gv-active").siblings().removeClass("gv-active")}}],init:function(t){e(this).find(".gv-drag-".concat(t.dragAction)).addClass("gv-active").siblings().removeClass("gv-active")}},{name:"Toggle your mouse wheel action between zoom in/out and default page scroll",buttons:[{name:"Mouse wheel action to scroll the page up and down",icon:'<i class="fas fa-arrows-alt-v"></i>',class:"gv-wheel-off",action:function(t){t.setWheelAction("off"),e(this).addClass("gv-active").siblings().removeClass("gv-active")}},{name:"Mouse wheel to zoom in and out",icon:"&#177;",class:"gv-wheel-zoom",action:function(t){t.setWheelAction("zoom"),e(this).addClass("gv-active").siblings().removeClass("gv-active")}}],init:function(t){e(this).find(".gv-wheel-".concat(t.wheelAction)).addClass("gv-active").siblings().removeClass("gv-active")}}],this.saveable&&this.controls.push({icon:'<i class="fas fa-undo"></i>',name:"Reset tracks and configuration",action:function(t){t.resetConfig()}}),this.on({beforeInit:function(){var t=this,a=this;this.tracksLibrary=(this.tracksLibrary||this.tracks).map((function(e){return t.normaliseTrackDefinition(e)})).filter((function(t){return t.prototype.name}));var n=e('\n        <table cellspacing=0 cellpadding=0 class="gv">\n          <tr>\n            <td class="gv-panel gv-panel-left"></td>\n            <td class="gv-canvas-container"></td>\n            <td class="gv-panel gv-panel-right"></td>\n          </tr>\n        </table>\n      ').appendTo(this.container).find(".gv-panel-right");this.controlPanel=n,this.superContainer=this.container,this.container=e(".gv-canvas-container",this.container),a.controls.forEach((function(t){var n=e('<div class="gv-button-set">').attr("title",t.name).appendTo(a.superContainer.find(".gv-panel-right"));(t.buttons||[t]).forEach((function(i){var s=e("<button>".concat(i.icon,"</button>")).addClass(i.class).attr("title",i.name).appendTo(n);i.action&&s.on("click",(function(){i.action.call(s[0],a)})),i.init&&i!==t&&i.init.call(s[0],a)})),t.init&&t.init.call(n,a)})),this.superContainer.width(this.width),e(document).on("keydown",(function(t){27===t.keyCode&&(n.find("button.gv-drag-select").hasClass("gv-active")&&n.find("button.gv-drag-scroll").trigger("click"),e(".gv-menu .gv-close").trigger("click"))}))},afterInit:function(){var a=this,n=e('<button class="gv-tracks-library-button" title="Tracks menu"><i class="fas fa-bars"></i> Tracks</button>').on("click",(function(){var n=this,i=function t(e,a){var n,i;return null!==(n=e.constructor)&&void 0!==n&&null!==(i=n.ancestor)&&void 0!==i&&i.prototype?t(e.constructor.ancestor.prototype,a.concat(e.constructor.ancestor.prototype.tags||[])):a};if(e(this).hasClass("gv-active"))e(".gv-menu.gv-tracks-menu .gv-close").trigger("click"),e(this).removeClass("gv-active");else{var s=e(this).data("menu");if(s)s.show();else{var o;s=a.makeMenu({"Currently enabled tracks:":"Available tracks:",'<div class="gv-current-tracks"></div>':'<input placeholder="Search"><div class="gv-available-tracks"></div>'}).addClass("gv-tracks-menu"),e("input[placeholder=Search]",s).on("keyup",(function(){var t=this.value.toLowerCase();e(".gv-tracks-library-item",s).each((function(){var a=e(this).data("track"),n=!1;a.name&&a.name.toLowerCase().indexOf(t)>=0?n=!0:i(a,[]).concat(a.tags||[]).some((function(e){return e.toLowerCase().indexOf(t)>=0}))&&(n=!0);e(this)[n?"removeClass":"addClass"]("gv-hide")})),e(".gv-tracks-library-category",s).each((function(){var t=e(this).children(".gv-tracks-library-item:not(.gv-hide)");e(this)[t.length?"removeClass":"addClass"]("gv-hide")}))})),e(".gv-close",s).on("click",(function(){e(n).removeClass("gv-active")}));var r=e(".gv-available-tracks",s),c=e(".gv-current-tracks",s).before('<div class="gv-current-tracks-instructions">Drag and drop to reorder</div>').data({reload:function(){e(this).empty().data("listTracks")()},listTracks:function(){a.tracks.filter((function(t){return t.name&&!(!1===t.removable&&t.unsortable)&&!t.parentTrack&&!t.lockToTrack})).forEach((function(t){var a=e('<div class="gv-tracks-menu-track">').append('<span class="gv-tracks-menu-track-name" title="'.concat(t.name,'">').concat(t.defaultName,"</span>")).appendTo(c).data("track",t).addClass(t.unsortable?"gv-unsortable":"");!1===t.removable?a.prepend('<i class="gv-remove-track gv-menu-button fas fa-circle">'):a.prepend(e('<i class="gv-remove-track gv-menu-button fas fa-times-circle">').on("click",(function(){t.remove()})));var n=a.find(".gv-tracks-menu-track-name").tipsy({gravity:"w",trigger:"manual"}).on("mouseenter",(function(){var t=e(this).tipsy("show").data("tipsy").$tip;t&&t.css("zIndex",1002)})).on("mouseleave",(function(){e(this).tipsy("hide")}));t.name===t.defaultName&&n.tipsy("disable")}))}}).sortable({items:"div:not(.gv-unsortable)",cursor:"move",axis:"y",handle:"span",update:a.updateTrackOrder.bind(a),start:function(){c.find(".gv-tracks-menu-track-name").each((function(){e(this).tipsy("hide").tipsy("disable")}))},stop:function(){c.find(".gv-tracks-menu-track-name").each((function(){e(this).tipsy("enable")}))}});if(c.data("listTracks")(),a.saveable&&e('<div class="gv-tracks-menu-reset gv-menu-button"><i class="fas fa-undo"></i> Reset tracks and configuration</div>').insertAfter(c).on("click",(function(t){t.preventDefault(),a.resetConfig()})),null!==(o=a.tracksLibrary)&&void 0!==o&&o.length){var l=a.tracksLibrary.filter((function(t){return t.prototype.name&&!1!==t.prototype.removable})).reduce((function(t,e){var a=e.prototype.category||"";return t[a]=t[a]||[],t[a].push([e.prototype.name.toLowerCase(),e]),t}),{}),d=((null==t?void 0:t.tracksLibraryCategoryOrder)||[]).reduce((function(t,e,a){return Object.assign(t,(s=a+1,(i=e)in(n={})?Object.defineProperty(n,i,{value:s,enumerable:!0,configurable:!0,writable:!0}):n[i]=s,n));var n,i,s}),{});Object.keys(l).sort((function(t,e){return Boolean(e)-Boolean(t)||d[t]-d[e]||t.localeCompare(e)})).forEach((function(t,n,i){var s=i.length>1?e('<div class="gv-tracks-library-category">').append(e('<div class="gv-tracks-library-category-header">').html(t||"Other")).appendTo(r):r;l[t].sort((function(t,e){return t[0].localeCompare(e[0])})).forEach((function(t){var n=t[1];e('<div class="gv-tracks-library-item">').append(e('<i class="gv-add-track gv-menu-button fas fa-plus-circle">').on("click",(function(){a.trackIds=a.trackIds||{},a.trackIds[n.prototype.id]=a.trackIds[n.prototype.id]||1,a.addTrack(n.extend({id:"".concat(n.prototype.id).concat(a.tracksById[n.prototype.id]?a.trackIds[n.prototype.id]++:"")}))}))).append("<span>".concat(n.prototype.name,"</span>")).appendTo(s).data("track",n.prototype)}))}))}s.css({left:"50%",marginLeft:s.width()/-2}),e(this).data("menu",s)}e(this).addClass("gv-active")}}));this.labelContainer.prepend(e('<li class="gv-unsortable">').append(e('<div class="gv-button-set" title="Tracks menu">').append(n)))},afterAddDomElements:function(){this.wrapper.after('<div class="gv-powered-by">Powered by <a target="_blank" href="https://wtsi-web.github.io/Genoverse/">Genoverse</a></div>'),this.superContainer.find(".gv-panel-left").append(this.labelContainer)},"afterAddTracks afterRemoveTracks":function(){var t=this.superContainer.find(".gv-tracks-menu .gv-current-tracks");t.length&&t.data("reload").call(t)}}),this.on({afterSetName:function(t){var a=this.track;if(null!=a&&a.browser){var n=a.browser.superContainer.find(".gv-tracks-library-button").data("menu");n&&n.find(".gv-tracks-menu-track").filter((function(){return e(this).data("track")===a})).children(".gv-tracks-menu-track-name").attr("title",t).each((function(){t===a.defaultName?e(this).tipsy("hide").tipsy("disable"):e(this).tipsy("enable")}))}}},"tracks")},requires:n.default}},4394:function(t,e,a){a.r(e);var n=a(5337);e.default={karyotype:function(t){var e=this.jQuery;function a(){var a=e('<div class="gv-chromosome">'),i=e('<div class="gv-karyotype-container">').html(a).insertBefore(this.wrapper),s=this.assembly||this.genomeName,o="".concat(t.showAssembly&&s?"".concat(s,": "):"","Chr ").concat(this.chr);t.showAssembly&&s&&i.addClass("gv-show-assembly");var r=e('<div class="gv-chromosome"><ul class="gv-label-container"><li><span class="gv-name">'.concat(o,"</span></li></ul></div>")).appendTo(i),c=!1===t.karyotypeLabel?0:r.find(".gv-name").outerWidth(!0)+10;r.remove(),this.karyotype=new Genoverse({parent:this,container:a,width:a.width(),genome:this.genome,chr:this.chr,start:1,end:this.chromosomeSize,isStatic:!0,tracks:[n.default.extend({name:o,height:20,featureHeight:20,border:!1,legend:!1,unsortable:!0,click:function(t){var a=this.container.parent().offset().left,n=t.pageX-a,i=this.featurePositions.search({x:n,y:1,w:1,h:1})[0];if(i)if("mouseup"===t.type)this.browser.parent.isStatic||this.browser.parent.moveTo(i.chr,i.start,i.end,!0);else if(this.hoverFeature!==i&&!this.browser.hideTooltip){if(this.container.tipsy("hide"),i.label){var s=a+i.position[this.scale].start+i.position[this.scale].width/2;this.container.attr("title",i.label[0]).tipsy({trigger:"manual",container:"body"}).tipsy("show").data("tipsy").$tip.css("left",(function(){return 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'../../css/controlPanel.css';\nimport karyotype from './karyotype';\n\nconst plugin = function (pluginConf) {\n  const jQuery = this.jQuery;\n\n  this.controls = [\n    // Scroll left/right\n    {\n      name    : 'Scroll left and right by pressing and holding these buttons',\n      buttons : [{\n        name  : 'Scroll left',\n        icon  : '<i class=\"fas fa-chevron-left\"></i>',\n        class : 'gv-scroll-left',\n      }, {\n        name  : 'Scroll right',\n        icon  : '<i class=\"fas fa-chevron-right\"></i>',\n        class : 'gv-scroll-right',\n      }],\n      init: function (browser) {\n        const el = jQuery(this);\n\n        el.find('.gv-scroll-left, .gv-scroll-right').on({\n          mousedown : () => { browser.startDragScroll(); },\n          mouseup   : () => { browser.stopDragScroll();  },\n        });\n\n        el.find('.gv-scroll-left').mousehold(50,  () => { browser.move(browser.scrollDelta);  });\n        el.find('.gv-scroll-right').mousehold(50, () => { browser.move(-browser.scrollDelta); });\n      },\n    },\n\n    // Zoom in/out\n    {\n      name    : 'Zoom-in and zoom-out',\n      buttons : [{\n        name   : 'Zoom in',\n        icon   : '<i class=\"fas fa-search-plus\"></i>',\n        class  : 'gv-zoom-in',\n        action : (browser) => { browser.zoomIn(); },\n      }, {\n        name   : 'Zoom out',\n        icon   : '<i class=\"fas fa-search-minus\"></i>',\n        class  : 'gv-zoom-out',\n        action : (browser) => { browser.zoomOut(); },\n      }],\n    },\n\n    // Toogle drag action\n    {\n      name    : 'Toggle your mouse drag action between scroll left/right and select region',\n      buttons : [{\n        name   : 'Mouse drag action to scroll the browser left or right',\n        icon   : '<i class=\"fas fa-arrows-alt-h\"></i>',\n        class  : 'gv-drag-scroll',\n        action : function (browser) {\n          browser.setDragAction('scroll');\n          jQuery(this).addClass('gv-active').siblings().removeClass('gv-active');\n        },\n      }, {\n        name   : 'Mouse drag action to select a region',\n        icon   : '<i></i>',\n        class  : 'gv-drag-select',\n        action : function (browser) {\n          browser.setDragAction('select');\n          jQuery(this).addClass('gv-active').siblings().removeClass('gv-active');\n        },\n      }],\n      init: function (browser) {\n        jQuery(this).find(`.gv-drag-${browser.dragAction}`).addClass('gv-active').siblings().removeClass('gv-active');\n      },\n    },\n\n    // Toogle wheel action\n    {\n      name    : 'Toggle your mouse wheel action between zoom in/out and default page scroll',\n      buttons : [{\n        name   : 'Mouse wheel action to scroll the page up and down',\n        icon   : '<i class=\"fas fa-arrows-alt-v\"></i>',\n        class  : 'gv-wheel-off',\n        action : function (browser) {\n          browser.setWheelAction('off');\n          jQuery(this).addClass('gv-active').siblings().removeClass('gv-active');\n        },\n      }, {\n        name   : 'Mouse wheel to zoom in and out',\n        icon   : '&#177;',\n        class  : 'gv-wheel-zoom',\n        action : function (browser) {\n          browser.setWheelAction('zoom');\n          jQuery(this).addClass('gv-active').siblings().removeClass('gv-active');\n        },\n      }],\n      init: function (browser) {\n        jQuery(this).find(`.gv-wheel-${browser.wheelAction}`).addClass('gv-active').siblings().removeClass('gv-active');\n      },\n    },\n  ];\n\n  if (this.saveable) {\n    this.controls.push({\n      icon   : '<i class=\"fas fa-undo\"></i>',\n      name   : 'Reset tracks and configuration',\n      action : (browser) => { browser.resetConfig(); },\n    });\n  }\n\n  this.on({\n    beforeInit: function () {\n      const browser = this;\n\n      this.tracksLibrary = (this.tracksLibrary || this.tracks).map(\n        track => this.normaliseTrackDefinition(track)\n      ).filter(\n        track => track.prototype.name\n      );\n\n      const panel = jQuery(`\n        <table cellspacing=0 cellpadding=0 class=\"gv\">\n          <tr>\n            <td class=\"gv-panel gv-panel-left\"></td>\n            <td class=\"gv-canvas-container\"></td>\n            <td class=\"gv-panel gv-panel-right\"></td>\n          </tr>\n        </table>\n      `).appendTo(this.container).find('.gv-panel-right');\n\n      this.controlPanel   = panel;\n      this.superContainer = this.container;\n      this.container      = jQuery('.gv-canvas-container', this.container);\n\n      browser.controls.forEach(\n        (control) => {\n          const buttonSet = jQuery('<div class=\"gv-button-set\">').attr('title', control.name).appendTo(browser.superContainer.find('.gv-panel-right'));\n          const buttons   = control.buttons || [ control ];\n\n          buttons.forEach(\n            (button) => {\n              const el = jQuery(`<button>${button.icon}</button>`).addClass(button.class).attr('title', button.name).appendTo(buttonSet);\n\n              if (button.action) {\n                el.on('click', () => {\n                  button.action.call(el[0], browser);\n                });\n              }\n\n              if (button.init && button !== control) {\n                button.init.call(el[0], browser);\n              }\n            }\n          );\n\n          if (control.init) {\n            control.init.call(buttonSet, browser);\n          }\n        }\n      );\n\n      this.superContainer.width(this.width);\n\n      // ESC key to toggle crosshair select to drag mode and close menus\n      jQuery(document).on('keydown', (e) => {\n        if (e.keyCode === 27) {\n          if (panel.find('button.gv-drag-select').hasClass('gv-active')) {\n            panel.find('button.gv-drag-scroll').trigger('click');\n          }\n\n          jQuery('.gv-menu .gv-close').trigger('click');\n        }\n      });\n    },\n\n    afterInit: function () {\n      const browser      = this;\n      const tracksButton = jQuery('<button class=\"gv-tracks-library-button\" title=\"Tracks menu\"><i class=\"fas fa-bars\"></i> Tracks</button>').on('click', function () {\n        const button = this;\n\n        const getTrackTags = (track, tags) => (\n          track.constructor?.ancestor?.prototype\n            ? getTrackTags(track.constructor.ancestor.prototype, tags.concat(track.constructor.ancestor.prototype.tags || []))\n            : tags\n        );\n\n        if (jQuery(this).hasClass('gv-active')) {\n          jQuery('.gv-menu.gv-tracks-menu .gv-close').trigger('click');\n          jQuery(this).removeClass('gv-active');\n        } else {\n          let menu = jQuery(this).data('menu');\n\n          if (menu) {\n            menu.show();\n          } else {\n            menu = browser.makeMenu({\n              'Currently enabled tracks:'             : 'Available tracks:',\n              '<div class=\"gv-current-tracks\"></div>' : '<input placeholder=\"Search\"><div class=\"gv-available-tracks\"></div>',\n            }).addClass('gv-tracks-menu');\n\n            jQuery('input[placeholder=Search]', menu).on('keyup', function () {\n              const str = this.value.toLowerCase();\n\n              jQuery('.gv-tracks-library-item', menu).each(function () {\n                const track = jQuery(this).data('track');\n\n                let match = false;\n\n                if (track.name && track.name.toLowerCase().indexOf(str) >= 0) {\n                  match = true;\n                } else {\n                  const tags = getTrackTags(track, []).concat(track.tags || []);\n\n                  if (tags.some(tag => tag.toLowerCase().indexOf(str) >= 0)) {\n                    match = true;\n                  }\n                }\n\n                jQuery(this)[match ? 'removeClass' : 'addClass']('gv-hide');\n              });\n\n              jQuery('.gv-tracks-library-category', menu).each(function () {\n                const visibleTracks = jQuery(this).children('.gv-tracks-library-item:not(.gv-hide)');\n\n                jQuery(this)[visibleTracks.length ? 'removeClass' : 'addClass']('gv-hide');\n              });\n            });\n\n            jQuery('.gv-close', menu).on('click', () => {\n              jQuery(button).removeClass('gv-active');\n            });\n\n            const availableTracks = jQuery('.gv-available-tracks', menu);\n            const currentTracks   = jQuery('.gv-current-tracks',   menu).before('<div class=\"gv-current-tracks-instructions\">Drag and drop to reorder</div>').data({\n              reload     : function () { jQuery(this).empty().data('listTracks')(); },\n              listTracks : function () {\n                browser.tracks.filter(\n                  track => track.name && !(track.removable === false && track.unsortable) && !track.parentTrack && !track.lockToTrack\n                ).forEach(\n                  (track) => {\n                    const el = jQuery('<div class=\"gv-tracks-menu-track\">')\n                      .append(`<span class=\"gv-tracks-menu-track-name\" title=\"${track.name}\">${track.defaultName}</span>`)\n                      .appendTo(currentTracks)\n                      .data('track', track)\n                      .addClass(track.unsortable ? 'gv-unsortable' : '');\n\n                    if (track.removable === false) {\n                      el.prepend('<i class=\"gv-remove-track gv-menu-button fas fa-circle\">');\n                    } else {\n                      el.prepend(jQuery('<i class=\"gv-remove-track gv-menu-button fas fa-times-circle\">').on('click', () => { track.remove(); }));\n                    }\n\n                    const trackNameEl = el.find('.gv-tracks-menu-track-name').tipsy({ gravity: 'w', trigger: 'manual' }).on('mouseenter', function () {\n                      const tip = jQuery(this).tipsy('show').data('tipsy').$tip;\n\n                      if (tip) {\n                        tip.css('zIndex', 1002);\n                      }\n                    }).on('mouseleave', function () {\n                      jQuery(this).tipsy('hide');\n                    });\n\n                    if (track.name === track.defaultName) {\n                      trackNameEl.tipsy('disable');\n                    }\n                  }\n                );\n              },\n            }).sortable({\n              items  : 'div:not(.gv-unsortable)',\n              cursor : 'move',\n              axis   : 'y',\n              handle : 'span',\n              update : browser.updateTrackOrder.bind(browser),\n              start  : function () {\n                currentTracks.find('.gv-tracks-menu-track-name').each(function () { jQuery(this).tipsy('hide').tipsy('disable'); });\n              },\n              stop: function () {\n                currentTracks.find('.gv-tracks-menu-track-name').each(function () { jQuery(this).tipsy('enable'); });\n              },\n            });\n\n            currentTracks.data('listTracks')();\n\n            if (browser.saveable) {\n              jQuery('<div class=\"gv-tracks-menu-reset gv-menu-button\"><i class=\"fas fa-undo\"></i> Reset tracks and configuration</div>').insertAfter(currentTracks).on('click', (e) => {\n                e.preventDefault();\n                browser.resetConfig();\n              });\n            }\n\n            if (browser.tracksLibrary?.length) {\n              const tracksLibraryCategories = browser.tracksLibrary.filter(track => track.prototype.name && track.prototype.removable !== false).reduce(\n                (acc, track) => {\n                  const categoryName = track.prototype.category || '';\n\n                  acc[categoryName] = acc[categoryName] || [];\n                  acc[categoryName].push([ track.prototype.name.toLowerCase(), track ]);\n\n                  return acc;\n                },\n                {}\n              );\n\n              const tracksLibraryCategoryOrder = (pluginConf?.tracksLibraryCategoryOrder || []).reduce(\n                (acc, categoryName, i) => Object.assign(acc, { [categoryName]: i + 1 }),\n                {}\n              );\n\n              Object.keys(tracksLibraryCategories).sort((a, b) => (Boolean(b) - Boolean(a)) || (tracksLibraryCategoryOrder[a] - tracksLibraryCategoryOrder[b]) || a.localeCompare(b)).forEach(\n                (categoryName, i, allCategoryNames) => {\n                  const parentEl = (\n                    allCategoryNames.length > 1\n                      ? jQuery('<div class=\"gv-tracks-library-category\">').append(\n                        jQuery('<div class=\"gv-tracks-library-category-header\">').html(categoryName || 'Other')\n                      ).appendTo(availableTracks)\n                      : availableTracks\n                  );\n\n                  tracksLibraryCategories[categoryName].sort((a, b) => a[0].localeCompare(b[0])).forEach(\n                    (row) => {\n                      const track = row[1];\n\n                      jQuery('<div class=\"gv-tracks-library-item\">').append(\n                        jQuery('<i class=\"gv-add-track gv-menu-button fas fa-plus-circle\">').on('click', () => {\n                          browser.trackIds                     = browser.trackIds || {};\n                          browser.trackIds[track.prototype.id] = browser.trackIds[track.prototype.id] || 1;\n\n                          browser.addTrack(track.extend({ id: `${track.prototype.id}${browser.tracksById[track.prototype.id] ? browser.trackIds[track.prototype.id]++ : ''}` }));\n                        })\n                      ).append(`<span>${track.prototype.name}</span>`).appendTo(parentEl).data('track', track.prototype);\n                    }\n                  );\n                }\n              );\n            }\n\n            menu.css({ left: '50%', marginLeft: menu.width() / -2 });\n\n            jQuery(this).data('menu', menu);\n          }\n\n          jQuery(this).addClass('gv-active');\n        }\n      });\n\n      this.labelContainer.prepend(\n        jQuery('<li class=\"gv-unsortable\">').append(\n          jQuery('<div class=\"gv-button-set\" title=\"Tracks menu\">').append(tracksButton)\n        )\n      );\n    },\n\n    afterAddDomElements: function () {\n      this.wrapper.after('<div class=\"gv-powered-by\">Powered by <a target=\"_blank\" href=\"https://wtsi-web.github.io/Genoverse/\">Genoverse</a></div>');\n      this.superContainer.find('.gv-panel-left').append(this.labelContainer);\n    },\n\n    'afterAddTracks afterRemoveTracks': function () {\n      const currentTracks = this.superContainer.find('.gv-tracks-menu .gv-current-tracks');\n\n      if (currentTracks.length) {\n        currentTracks.data('reload').call(currentTracks);\n      }\n    },\n  });\n\n  this.on({\n    afterSetName: function (name) {\n      const track = this.track;\n\n      if (track?.browser) {\n        const menu = track.browser.superContainer.find('.gv-tracks-library-button').data('menu');\n\n        if (menu) {\n          menu.find('.gv-tracks-menu-track').filter(function () {\n            return jQuery(this).data('track') === track;\n          }).children('.gv-tracks-menu-track-name').attr('title', name).each(function () {\n            if (name === track.defaultName) {\n              jQuery(this).tipsy('hide').tipsy('disable');\n            } else {\n              jQuery(this).tipsy('enable');\n            }\n          });\n        }\n      }\n    },\n  }, 'tracks');\n};\n\nexport default { controlPanel: plugin, requires: karyotype };\n","import '../../css/karyotype.css';\nimport Chromosome from '../Track/library/Chromosome';\n\nconst plugin = function (pluginConf) {\n  const jQuery = this.jQuery;\n\n  function createKaryotype() {\n    const chromosome   = jQuery('<div class=\"gv-chromosome\">');\n    const container    = jQuery('<div class=\"gv-karyotype-container\">').html(chromosome).insertBefore(this.wrapper);\n    const assemblyName = this.assembly || this.genomeName;\n    const name         = `${pluginConf.showAssembly && assemblyName ? `${assemblyName}: ` : ''}Chr ${this.chr}`;\n\n    if (pluginConf.showAssembly && assemblyName) {\n      container.addClass('gv-show-assembly');\n    }\n\n    const measureWidth = jQuery(`<div class=\"gv-chromosome\"><ul class=\"gv-label-container\"><li><span class=\"gv-name\">${name}</span></li></ul></div>`).appendTo(container);\n    const labelWidth   = pluginConf.karyotypeLabel === false ? 0 : measureWidth.find('.gv-name').outerWidth(true) + 10;\n\n    measureWidth.remove();\n\n    this.karyotype = new Genoverse({\n      parent    : this,\n      container : chromosome,\n      width     : chromosome.width(),\n      genome    : this.genome,\n      chr       : this.chr,\n      start     : 1,\n      end       : this.chromosomeSize,\n      isStatic  : true,\n      tracks    : [\n        Chromosome.extend({\n          name          : name,\n          height        : 20,\n          featureHeight : 20,\n          border        : false,\n          legend        : false,\n          unsortable    : true,\n\n          click: function (e) {\n            const offset = this.container.parent().offset().left;\n            const x      = e.pageX - offset;\n            const f      = this.featurePositions.search({ x: x, y: 1, w: 1, h: 1 })[0];\n\n            if (f) {\n              if (e.type === 'mouseup') {\n                if (!this.browser.parent.isStatic) {\n                  this.browser.parent.moveTo(f.chr, f.start, f.end, true);\n                }\n              } else if (this.hoverFeature !== f && !this.browser.hideTooltip) {\n                this.container.tipsy('hide');\n\n                if (f.label) {\n                  const left = offset + f.position[this.scale].start + f.position[this.scale].width / 2;\n\n                  this.container.attr('title', f.label[0]).tipsy({ trigger: 'manual', container: 'body' }).tipsy('show').data('tipsy').$tip.css('left', function () { return left - jQuery(this).width() / 2; });\n                }\n\n                this.hoverFeature = f;\n              }\n            }\n          },\n\n          addUserEventHandlers: function () {\n            const track = this;\n\n            this.base();\n\n            this.container.on({\n              mousemove : (e) => { track.click(e); },\n              mouseout  : (e) => {\n                if (track.browser.viewPoint.is(e.relatedTarget) || track.browser.viewPoint.find(e.relatedTarget).length) {\n                  return true;\n                }\n\n                track.container.tipsy('hide');\n                track.hoverFeature = false;\n              },\n            }, '.gv-image-container');\n\n            // Don't allow zooming in and out on the karyotype image\n            this.container.on('mousewheel', '.gv-image-container, .gv-selector', (e) => {\n              e.stopPropagation();\n            });\n          },\n\n          afterSetName: function () {\n            this.label.css('lineHeight', `${this.label.height()}px`);\n          },\n        }),\n      ],\n\n      addUserEventHandlers: () => {},\n\n      afterInit: function () {\n        this.updatePosition();\n        this.viewPoint.fadeIn();\n      },\n\n      afterAddTracks: function () {\n        this.track = this.tracks[0];\n      },\n\n      afterAddDomElements: function () {\n        const karyotype = this;\n        const parent    = this.parent;\n\n        function hideTooltip() {\n          karyotype.hideTooltip = true;\n          karyotype.track.prop('container').tipsy('hide');\n        }\n\n        function updateLocation(e, ui) {\n          karyotype.hideTooltip = false;\n\n          const scale = karyotype.chromosomeSize / karyotype.width;\n          const axis  = e.type === 'resizestop' ? jQuery(this).data('ui-resizable').axis : undefined;\n          const start = axis === 'e' ? parent.start : Math.max(Math.floor(ui.position.left * scale), 1);\n          const end   = axis === 'w' ? parent.end   : e.type === 'dragstop' ? start + parent.length - 1 : Math.floor(ui.helper.outerWidth(true) * scale) + start;\n\n          if (start !== parent.start || end !== parent.end) {\n            parent.moveTo(karyotype.chr, start, end, true, e.type === 'dragstop');\n          }\n        }\n\n        if (pluginConf.karyotypeLabel === false) {\n          this.labelContainer.remove();\n          this.labelContainer = jQuery();\n          container.addClass('gv-no-label');\n        } else {\n          this.labelContainer.width(labelWidth);\n        }\n\n        this.viewPoint = jQuery('<div class=\"gv-karyotype-viewpoint-wrapper\"><div class=\"gv-karyotype-viewpoint\"></div></div>').appendTo(container).css({\n          left  : labelWidth,\n          width : this.width - labelWidth,\n        }).children().on({\n          mousemove : (e) => { karyotype.track.controller.click(e); },\n          mouseout  : (e) => {\n            const el = jQuery(e.relatedTarget);\n\n            if (karyotype.viewPoint.is(el) || karyotype.viewPoint.find(el).length || (el.prop('nodeName') === 'IMG' && el.parent().is(karyotype.track.prop('imgContainers')[0]))) {\n              return true;\n            }\n\n            karyotype.track.prop('container').tipsy('hide');\n            karyotype.track.prop('hoverFeature', false);\n          },\n        });\n\n        if (!parent.isStatic) {\n          this.viewPoint.draggable({\n            axis        : 'x',\n            containment : this.wrapper,\n            start       : hideTooltip,\n            stop        : updateLocation,\n          }).resizable({\n            handles     : 'e, w',\n            containment : 'parent',\n            start       : hideTooltip,\n            stop        : updateLocation,\n            resize      : function (e, ui) {\n              ui.element.css('left', Math.max(0, ui.position.left));\n\n              if (ui.position.left > 0) {\n                ui.element.width(Math.min(ui.size.width, ui.element.parent().width() - ui.position.left));\n              } else {\n                ui.element.width(ui.size.width + ui.position.left);\n              }\n            },\n          });\n        }\n      },\n\n      updatePosition: function () {\n        const left  =  this.parent.start * this.scale;\n        const width = (this.parent.end   * this.scale) - left;\n\n        this.viewPoint.css({ left: left, width: width });\n      },\n    });\n\n    if (this.loadedPlugins.controlPanel !== true) {\n      jQuery('<li class=\"gv-unsortable\">').height((i, h) => h + container.height()).prependTo(this.labelContainer);\n    }\n  }\n\n  function recreateKaryotype() {\n    const container = this.karyotype.container.parent();\n\n    this.karyotype.destroy();\n    container.remove();\n\n    createKaryotype.call(this);\n  }\n\n  this.on({\n    afterInit: createKaryotype,\n\n    afterSetRange: function () {\n      if (this.karyotype) {\n        this.karyotype.updatePosition();\n      }\n    },\n\n    afterSetWidth: recreateKaryotype,\n\n    afterMoveTo: function (chr) {\n      if (this.karyotype && this.karyotype.chr !== chr) {\n        recreateKaryotype.call(this);\n      }\n    },\n  });\n};\n\nexport default { karyotype: plugin };\n"],"names":["controlPanel","pluginConf","jQuery","this","controls","name","buttons","icon","class","init","browser","el","find","on","mousedown","startDragScroll","mouseup","stopDragScroll","mousehold","move","scrollDelta","action","zoomIn","zoomOut","setDragAction","addClass","siblings","removeClass","dragAction","setWheelAction","wheelAction","saveable","push","resetConfig","beforeInit","tracksLibrary","tracks","map","track","normaliseTrackDefinition","filter","prototype","panel","appendTo","container","superContainer","forEach","control","buttonSet","attr","button","call","width","document","e","keyCode","hasClass","trigger","afterInit","tracksButton","getTrackTags","tags","constructor","ancestor","concat","menu","data","show","makeMenu","str","value","toLowerCase","each","match","indexOf","some","tag","visibleTracks","children","length","availableTracks","currentTracks","before","reload","empty","listTracks","removable","unsortable","parentTrack","lockToTrack","append","defaultName","prepend","remove","trackNameEl","tipsy","gravity","tip","$tip","css","sortable","items","cursor","axis","handle","update","updateTrackOrder","bind","start","stop","insertAfter","preventDefault","tracksLibraryCategories","reduce","acc","categoryName","category","tracksLibraryCategoryOrder","i","Object","assign","keys","sort","a","b","Boolean","localeCompare","allCategoryNames","parentEl","html","row","trackIds","id","addTrack","extend","tracksById","left","marginLeft","labelContainer","afterAddDomElements","wrapper","after","afterSetName","requires","karyotype","createKaryotype","chromosome","insertBefore","assemblyName","assembly","genomeName","showAssembly","chr","measureWidth","labelWidth","karyotypeLabel","outerWidth","Genoverse","parent","genome","end","chromosomeSize","isStatic","Chromosome","height","featureHeight","border","legend","click","offset","x","pageX","f","featurePositions","search","y","w","h","type","moveTo","hoverFeature","hideTooltip","label","position","scale","addUserEventHandlers","base","mousemove","mouseout","viewPoint","is","relatedTarget","stopPropagation","updatePosition","fadeIn","afterAddTracks","prop","updateLocation","ui","undefined","Math","max","floor","helper","controller","draggable","containment","resizable","handles","resize","element","min","size","loadedPlugins","prependTo","recreateKaryotype","destroy","afterSetRange","afterSetWidth","afterMoveTo"],"sourceRoot":""}

package/dist/842.genoverse.js

@@ -0,0 +1,2 @@
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