geneviewer-js 0.3.0 → 0.3.2

package/README.md

@@ -192,7 +192,7 @@ Set `PORT` to use a port other than 4849.
 
 1. Bump `version` in `package.json` and `src/lib/chart.js` (`npm run check`
    compares them).
-2. Commit, then tag and push: `git tag v0.3.1 && git push origin main v0.3.1`.
+2. Commit, then tag and push: `git tag v0.3.2 && git push origin main v0.3.2`.
 
 The publish workflow tests and builds, publishes to npm with provenance,
 and attaches `dist/` to a GitHub release.
@@ -201,15 +201,16 @@ and attaches `dist/` to a GitHub release.
 
 The R package vendors a release: its copies of the files are stored in the R
 repo and shipped inside the package, so users never download JavaScript
-separately. A maintainer pulls a new release with:
+separately. From the R repo, a maintainer pulls a release with:
 
 ```sh
-curl -sSLO https://github.com/nvelden/geneviewer-js/releases/download/v0.3.0/{geneviewer.core.js,geneviewer.css,themes.json,geneviewerwidget.js,SHA256SUMS}
-shasum -a 256 -c SHA256SUMS --ignore-missing
+Rscript dev/update_js.R 0.3.2
 ```
 
-They then copy the files into `inst/htmlwidgets/`. Do not edit those copies in
-the R repo; make changes here and cut a new release.
+It downloads `geneviewer.core.js`, `geneviewer.css`, `themes.json`, the
+binding and `SHA256SUMS` from the GitHub release, checks the checksums and
+writes them to `inst/htmlwidgets/`. Do not edit those copies in the R repo;
+make changes here and cut a new release.
 
 ## Roadmap
 

package/dist/SHA256SUMS

@@ -1,11 +1,11 @@
-e78728da421c9b7bf3002d853fecd4497e27d8be4331fb391caab93722b4b724  geneviewer.core.js
+a2189b6979396309b4338d0c080667d3dc327874b7b1bc724519093ff5c0b992  geneviewer.core.js
 d96c80adea1ce9ebe5323e153e4f1e014816ef37d502c849741d68f7b3fa6575  geneviewer.css
-3a363a3b443504da4589aaf3102b00d8f488df77b6f358721f640f7befbf6c28  geneviewer.d.ts
-45815b9a041648042911b03214c71412e02c2a79192ec581100ceea08d3572bd  geneviewer.min.js
-f8541286b4ed988290501a507a70633a714cf243181569526c219fa7c868d331  geneviewer.min.js.map
-039077a86bff0ba3dbbec37578f468ee4f71c54c44a2f9126ae691e83d5b7f91  geneviewer.mjs
-cf000dfc911a3e3302f2007f3e1fee132da4dfafd2f94dcc9c884fa772a23975  geneviewer.standalone.mjs
-1025a3defe0032717b7fdd571dfc0f90df9696846066818f8a94079e103a8b23  geneviewer.standalone.mjs.map
-0bc331bce739358f3150af8b1ad3851a4c4cbbf6763cc122fe3b41008b230020  geneviewerwidget.js
+78b8e7230f617d026d719dd2a737235cff0dfd2eccea9a45c6a2f3dc8c79012b  geneviewer.d.ts
+3dc423bcc69d96ebf3b90d76514ad77fd933d4d32aecec7603831e7d7be37078  geneviewer.min.js
+3d8ab4ba117d4e8d0dbaa81e3821eb89a43f2061b32d4bab1a9b472f48f60148  geneviewer.min.js.map
+94fd03a9d11a866e5c2334bf78b5f8024d39e70075ec31387e3544ea4d858f91  geneviewer.mjs
+99332f7fd0f9feae88ca01432a3747ab9fe24da4c7e80c1ac36dc607c1060518  geneviewer.standalone.mjs
+47ddd606b7a6fdc1567f239e80e7c3ef6d885c64786fde1f8c42cf9aae625a21  geneviewer.standalone.mjs.map
+6c10d97166d6ae208888b3c0ba2a9fa1301888e759a49f1761ee5c00843fddff  geneviewerwidget.js
 3d9a1611127c02a515da15b88c46f9da30e0f8ade676919e7502244aef4dd000  spec.d.ts
 65ebaa72b864ba74fabc06aa02d858a0a621e5579dadc0c5d9d7add1ba48f246  themes.json

package/dist/geneviewer.core.js

@@ -6075,7 +6075,8 @@ var geneviewer = (() => {
     }
     if (options.position !== null && options.position !== void 0) {
       if (options.type === "rectangle") {
-        options.position = [options.position].flat(0).map((corners) => {
+        const rectangles = Array.isArray(options.position) ? options.position : [options.position];
+        options.position = rectangles.map((corners) => {
           if (!Array.isArray(corners)) return [move(corners)];
           return corners.map((point) => Array.isArray(point) ? [move(point[0]), ...point.slice(1)] : move(point));
         });
@@ -7325,7 +7326,7 @@ var geneviewer = (() => {
   }
 
   // src/lib/chart.js
-  var version = "0.3.0";
+  var version = "0.3.2";
   var renderSequence = 0;
   var chartCount = 0;
   var activeShortcuts = null;
@@ -7565,9 +7566,15 @@ var geneviewer = (() => {
         return keyOf(item) === key;
       });
     };
+    var copyItem = function(item) {
+      return item === null ? null : structuredClone(item);
+    };
+    var copySelection = function() {
+      return selection.map(copyItem);
+    };
     var reportSelection = function() {
-      report("select", selected);
-      report("selection", selection);
+      report("select", copyItem(selected));
+      report("selection", copySelection());
     };
     var applySelection = function(refresh) {
       var previous = JSON.stringify(selection.map(function(item) {
@@ -8938,7 +8945,7 @@ var geneviewer = (() => {
         changeSelection(matchItems(items == null ? [] : Array.isArray(items) ? items : [items]), "replace");
       },
       getSelection: function() {
-        return selection.slice();
+        return copySelection();
       },
       undo: function() {
         if (!destroyed) step(true);

package/dist/geneviewer.d.ts

@@ -91,6 +91,7 @@ export type Chart = {
     /**
      * The selected elements,
      * as the selection event reports them; the last is the one select reports.
+     * The items are copies: changing them does not change the selection.
      */
     getSelection: () => Array<SelectionItem>;
     /**