geneseed 3.13.0 → 3.14.0

package/js/web/actions.mjs

@@ -27,7 +27,7 @@
  */
 import { spawn } from 'node:child_process';
 import {
-  accessSync, constants, copyFileSync, mkdirSync, mkdtempSync, rmSync, unlinkSync,
+  accessSync, constants, copyFileSync, mkdirSync, mkdtempSync, realpathSync, rmSync, unlinkSync,
 } from 'node:fs';
 import os from 'node:os';
 import path from 'node:path';
@@ -40,10 +40,10 @@ import { withStdoutSwallowed } from '../inspect/diff.mjs';
 import { excludeAdd, excludeRemove } from '../inspect/excludes.mjs';
 import { setupBuildArgs } from '../build/generate.mjs';
 import { DEFAULT_PRESET, PRESETS } from '../loop/score.mjs';
-import { setLoopPreset } from '../loop/registry.mjs';
-import { frontmatter, memoryDropIndex } from '../hosts/hooks.mjs';
+import { activeLoops, setLoopPreset } from '../loop/registry.mjs';
+import { frontmatter, memoryDropIndex } from '../hosts/memory-files.mjs';
 import {
-  HOSTS, bobConfigDir, claudeConfigDir, expanduser, openclaudeConfigDir,
+  CLAUDE_STYLE, HOSTS, bobConfigDir, claudeConfigDir, expanduser, openclaudeConfigDir,
   opencodeConfigDir, resolvePath,
 } from '../hosts/hosts.mjs';
 import {
@@ -57,6 +57,7 @@ import {
 import { readText, writeText, isFile, isDir } from '../lib/fs.mjs';
 import { parseJson, formatRepr, formatValue, isTruthy } from '../lib/json.mjs';
 import { NO_WINDOW } from '../lib/proc.mjs';
+import { normcase } from '../lib/paths.mjs';
 import { WHITESPACE, codePointLength, stripWhitespace } from '../lib/text.mjs';
 import { installDeactivate, installReactivate, installUninstall } from '../maintain/uninstall.mjs';
 import { splitLines } from '../lib/udiff.mjs';
@@ -582,24 +583,30 @@ export function apiExcludesMutate(state, body) {
 
 /**
  * The Active tab's one write: rewrite a registered worktree's `LOOP.md` `preset` field.
- * `setLoopPreset` throws for both refusals the brief requires `POST /api/loops/preset` to make —
- * a `root` the registry does not know (no arbitrary path writes) and a `preset` outside
- * `PRESETS` — and this is where those two throws are turned into the `NotFound` convention
- * every other mutating route here already answers in, so the handler's catch (`4xx`, not the
- * 500 a bare `Error` would fall to) covers this route the same way it covers `apiRulesMutate`'s
- * unknown id. Anything else `setLoopPreset` throws — a corrupt `LOOP.md` that fails to
- * parse, say — is not one of those two refusals and is rethrown as-is, so it falls through to
- * the handler's 500 instead of being misreported as "not found".
+ * `POST /api/loops/preset` makes two refusals — a `preset` outside `PRESETS` and a `root` that is
+ * not a running registered loop (no arbitrary path writes) — and both are decided HERE, as the
+ * `NotFound` every other mutating route answers in, so the handler's catch (`4xx`, not the 500 a
+ * bare `Error` would fall to) covers this route the way it covers `apiRulesMutate`'s unknown id.
+ *
+ * DECIDED, NOT RECOGNISED. This route used to call `setLoopPreset` and sort its throws by their
+ * MESSAGE text, so rewording an error in `js/loop/registry.mjs` would have turned a 404 into a
+ * 500 with no test of this file noticing. "Running" is `activeLoops`' word for it — registered,
+ * still a directory, `LOOP.md` present (a corrupt one included, so that it reaches the parse and
+ * fails there) — matched on the root the registry stores, which is the realpath. The preset is
+ * checked first: `activeLoops` may prune the registry, and a refused preset must touch nothing
+ * (`tests/unit/web_server.test.mjs` probes this route against the real machine's registry).
+ * Anything `setLoopPreset` still throws, a corrupt `LOOP.md` above all, is a 500.
  */
 export function apiLoopsPresetMutate(state, body) {
   const root = strOr(bget(body, 'root'));
   const preset = strOr(bget(body, 'preset'));
-  try {
-    return { ok: true, loop: setLoopPreset(root, preset) };
-  } catch (e) {
-    if (e.message === 'unknown loop' || e.message.startsWith('unknown preset ')) throw new NotFound(e.message);
-    throw e;
-  }
+  if (!Object.hasOwn(PRESETS, preset)) throw new NotFound(`unknown preset ${JSON.stringify(preset)}`);
+  let key;
+  try { key = realpathSync.native(root); } catch { key = path.resolve(root); }
+  const running = root && activeLoops().some((l) => l.status !== 'finished'
+    && normcase(l.root) === normcase(key));
+  if (!running) throw new NotFound('unknown loop');
+  return { ok: true, loop: setLoopPreset(root, preset) };
 }
 
 // ---- MCP ----------------------------------------------------------------------------------
@@ -670,7 +677,7 @@ export function apiMcpToggle(state, body) {
     return { ok: false, error: 'config holds comments — edit it by hand to keep them' };
   }
   let cfg;
-  if (['claude', 'bob', 'openclaude'].includes(host)) {
+  if (CLAUDE_STYLE.includes(host)) {
     if (isFile(p)) {
       let parsed;
       try {
@@ -811,6 +818,9 @@ export function apiRestore(state, files) {
       // behind it — prompt and boundary disagreeing by a WRITE, the write-side twin of the
       // read-side hole `diffCollect` had (and the reason the panel offered the file at all).
       doctrines: doctrinesForBuild(target),
+      // The excluded rules for the same boundary reason: without them a restored AGENT.md
+      // re-states a rule whose hook gate the install deliberately left unwired.
+      excludeRules: excludedRulesOfDir(target),
     }));
     for (const raw of (isTruthy(files) ? files : [])) {
       const rel = stripWhitespace(formatValue(raw).replace(/\\/g, '/')).replace(/^\/+/, '');

package/js/web/api.mjs

@@ -18,13 +18,13 @@ import { sourceReleaseVersion } from '../hosts/opencode.mjs';
 import { diffCollect } from '../inspect/diff.mjs';
 import { doctorCollect } from '../inspect/doctor.mjs';
 import { excludesSnapshot } from '../inspect/excludes.mjs';
-import { GLOBAL_MANIFEST, HOSTS, opencodeConfigDir, resolvePath } from '../hosts/hosts.mjs';
+import { CLAUDE_STYLE, GLOBAL_MANIFEST, HOSTS, opencodeConfigDir, resolvePath } from '../hosts/hosts.mjs';
 import {
   doctrinesForBuild, excludedRulesOfDir, footprintOfDir, installState, installTargets,
   installedDefaults, modeOfDir, trustOfDir,
   postureOfDir, readJsonMaybe, readMaybe, themeOfDir,
 } from '../hosts/installs.mjs';
-import { frontmatter } from '../hosts/hooks.mjs';
+import { frontmatter } from '../hosts/memory-files.mjs';
 import { DEFAULT_PRESET, PRESETS } from '../loop/score.mjs';
 import { loadCatalog, catalogProblems } from '../loop/catalog.mjs';
 import { activeLoops } from '../loop/registry.mjs';
@@ -99,10 +99,15 @@ export function webState(theme = null, target = null) {
   st.root = st.target;
   st.theme = theme || themeOfDir(st.target) || 'neutral';
   st.emit = installedDefaults().emit || 'opencode-global';
-  st.footprint = footprintOfDir(st.target);      // 'full' when no marker
-  st.posture = postureOfDir(st.target) || 'peer';
-  st.mode = modeOfDir(st.target) || 'direct';
-  st.trust = trustOfDir(st.target) || DEFAULT_PRESET;
+  // The install's sigils, each defaulted when its marker is absent (footprint to 'full').
+  // Read from the ROOT, where every emit writes them.
+  const readMarkers = () => {
+    st.footprint = footprintOfDir(st.root);
+    st.posture = postureOfDir(st.root) || 'peer';
+    st.mode = modeOfDir(st.root) || 'direct';
+    st.trust = trustOfDir(st.root) || DEFAULT_PRESET;
+  };
+  readMarkers();
 
   Object.defineProperty(st, 'inventory', {
     get() {
@@ -156,10 +161,7 @@ export function webState(theme = null, target = null) {
     st.root = root || target;
     st.theme = themeOfDir(st.root) || themeOfDir(st.target) || 'neutral';
     st.emit = st.detectEmit();
-    st.footprint = footprintOfDir(st.root);
-    st.posture = postureOfDir(st.root) || 'peer';
-    st.mode = modeOfDir(st.root) || 'direct';
-    st.trust = trustOfDir(st.root) || DEFAULT_PRESET;
+    readMarkers();
     st._inv = null;
     st._doctor = null;
   };
@@ -168,10 +170,7 @@ export function webState(theme = null, target = null) {
     st._doctor = null;
     st.theme = themeOfDir(st.root) || themeOfDir(st.target) || st.theme;
     st.emit = st.detectEmit() || st.emit;
-    st.footprint = footprintOfDir(st.root);
-    st.posture = postureOfDir(st.root) || 'peer';
-    st.mode = modeOfDir(st.root) || 'direct';
-    st.trust = trustOfDir(st.root) || DEFAULT_PRESET;
+    readMarkers();
   };
   return st;
 }
@@ -732,7 +731,7 @@ export const apiExcludes = () => excludesSnapshot();
  * nested-marker host cannot silently read the bare root.
  */
 export function viewCfg(host, scope, root) {
-  if (scope === 'project' && ['claude', 'bob', 'openclaude'].includes(host)) {
+  if (scope === 'project' && CLAUDE_STYLE.includes(host)) {
     return path.join(root, HOSTS.find((h) => h.host === host).projectMarker);
   }
   return root;
@@ -800,13 +799,11 @@ export function apiOverview(state) {
     buildEpoch = Math.floor(ms / 1000);
   }
   // Which detected install the current view points at, so the dashboard's footprint hero
-  // can re-emit exactly it. Mirrors `viewCfg`'s rule, spelled out separately here.
+  // can re-emit exactly it.
   let install = null;
   for (const [host, scope, root] of installTargets()) {
-    const data = (scope === 'project' && ['claude', 'bob', 'openclaude'].includes(host))
-      ? path.join(root, HOSTS.find((h) => h.host === host).projectMarker) : root;
     try {
-      if (samePath(data, state.target)) {
+      if (samePath(viewCfg(host, scope, root), state.target)) {
         install = { host, scope, path: root, footprint: footprintOfDir(root) };
         break;
       }
@@ -954,7 +951,9 @@ export function apiRecent(state) {
  * layout needs `nodes`, `edges` and `loops` exactly as the engine reads them.
  */
 export function apiLoops(state) {
-  const { bricks, templates, overridden } = loadCatalog({ projectRoot: state.root });
+  const opts = { projectRoot: state.root };
+  const catalog = loadCatalog(opts);
+  const { bricks, templates, overridden } = catalog;
   const byName = ([a], [b]) => (a < b ? -1 : 1);
   return {
     templates: [...templates].sort(byName).map(([name, { origin, ...graph }]) => ({
@@ -965,7 +964,8 @@ export function apiLoops(state) {
     // A brick or template the catalogue skipped (bad frontmatter, not JSON, misnamed), and a
     // template that fails the graph rules: the page says so — the same list `loop check`
     // prints — or a team's broken override would just silently not be there.
-    problems: catalogProblems({ projectRoot: state.root }),
+    // The catalogue already loaded above, not a second read of every brick and template.
+    problems: catalogProblems(opts, catalog),
   };
 }
 

package/js/web/docs.mjs

@@ -291,11 +291,20 @@ function subCounts(state, body) {
 /**
  * The Docs selector names a HOST; a tag names a host or a FAMILY. Bob and OpenClaude emit
  * through the Claude engine, so a `claude` tag (page or block) is the Claude family and shows
- * to all three of them, while `bob` / `openclaude` narrow to the one host. The same mapping as
- * the console's host table (`web/src/lib/hosts.js`, its `docs` column).
+ * to all three of them, while `bob` / `openclaude` narrow to the one host. `name` is how a
+ * host-only passage's visible label spells the host. One row per host: the family table, the
+ * host list and both marker patterns below are read off it.
  */
-export const HOST_FAMILY = { opencode: 'opencode', claude: 'claude', openclaude: 'claude', bob: 'claude' };
-export const HARNESSES = Object.keys(HOST_FAMILY);
+const DOC_HOSTS = {
+  opencode: { family: 'opencode', name: 'OpenCode' },
+  claude: { family: 'claude', name: 'Claude Code' },
+  openclaude: { family: 'claude', name: 'OpenClaude' },
+  bob: { family: 'claude', name: 'IBM Bob' },
+};
+export const HOST_FAMILY = Object.fromEntries(
+  Object.entries(DOC_HOSTS).map(([id, h]) => [id, h.family]));
+export const HARNESSES = Object.keys(DOC_HOSTS);
+const anyOf = (words) => `(?:${words.join('|')})`;
 /**
  * A page or block tagged `tag` shows to `host`. Untagged content shows to every host. One tag
  * names a host or a family; a LIST names hosts exactly, no family widening, because picking
@@ -307,7 +316,7 @@ export const harnessShows = (tag, host) => (Array.isArray(tag)
   : !tag || tag === host || tag === HOST_FAMILY[host]);
 /** A block's tag: `claude` alone, or `claude,openclaude` — the list, read as above. */
 const harnessTag = (raw) => (raw.includes(',') ? raw.split(/\s*,\s*/) : raw);
-const HOST_ID = '(?:opencode|claude|openclaude|bob)';
+const HOST_ID = anyOf(HARNESSES);
 const HARNESS_OPEN_RE = new RegExp(String.raw`^\s*<!--\s*harness:(${HOST_ID}(?:\s*,\s*${HOST_ID})*)\s*-->\s*$`);
 const HARNESS_CLOSE_RE = /^\s*<!--\s*\/harness\s*-->\s*$/;
 /**
@@ -328,9 +337,9 @@ export function normHarness(value, state) {
 /**
  * Every open has a matching close, with no nesting.
  *
- * A marker inside a ``` fence is example text, not a marker (the same rule `sliceSection`
- * uses). Its purpose is to FAIL OPEN: an unbalanced marker leaves the body untouched, so a
- * typo can never blank the rest of a page.
+ * A marker inside a ``` fence is example text, not a marker (the same rule the frontend's
+ * outline uses). Its purpose is to FAIL OPEN: an unbalanced marker leaves the body untouched,
+ * so a typo can never blank the rest of a page.
  *
  * EXPORTED FOR THE AUTHORING GATE, in the shape `installAgentEntryOf` established: failing
  * open means a typo is INVISIBLE in the rendered output — the page simply shows everything,
@@ -359,7 +368,7 @@ export function harnessBlocksBalanced(lines) {
  * the marker; the console has already filtered the block to the reader's host, so there the
  * label only repeats what the host selector says, and it goes with the marker.
  */
-const HOST_NAME = '(?:OpenCode|Claude Code|OpenClaude|IBM Bob)';
+const HOST_NAME = anyOf(Object.values(DOC_HOSTS).map((h) => h.name));
 const HOST_LABEL_RE = new RegExp(String.raw`^\s*\*\(${HOST_NAME}(?: and ${HOST_NAME})* only\)\*\s*$`);
 
 export function stripHarnessBlocks(body, harnessName) {
@@ -411,16 +420,14 @@ function visibleGroups(harnessName) {
   return groups;
 }
 
-// ---- slugs and section slicing ----------------------------------------------------------
+// ---- heading slugs -----------------------------------------------------------------------
 
 const SLUG_STRIP_RE = new RegExp(`[^a-z0-9${WHITESPACE}-]`, 'g');
 const SLUG_WS_RE = new RegExp(`[${WHITESPACE}]+`, 'g');
 const SLUG_DASH_RE = /-+/g;
-const HEADING_RE = /^(#{1,6})\s+(.+?)\s*$/;
 
 /**
- * The same rules the frontend's `slug()` uses, so a registry `anchor` written against a
- * heading matches the id the renderer assigns.
+ * The same rules the frontend's `slug()` uses for the id it gives a rendered heading.
  *
  * `WHITESPACE` and `stripWhitespace` rather than `\s` and `trim()` — see `WHITESPACE`'s own
  * docblock for the measured set of characters where this matters.
@@ -431,45 +438,6 @@ export function slugifyHeading(text) {
   return s.replace(/^-+|-+$/g, '');
 }
 
-/**
- * The body trimmed to one heading's section.
- *
- * Returns `[body, ok]`; `ok === false` (with the ORIGINAL body) when the anchor is
- * missing, so the caller falls back to the whole document. An H1 slice stops at the first
- * H2 — `max(level, 2)` — so it captures an intro paragraph rather than the whole file.
- */
-export function sliceSection(body, anchor) {
-  const lines = splitLines(body);
-  let start = -1;
-  let startLevel = 0;
-  let inFence = false;
-  for (let i = 0; i < lines.length; i += 1) {
-    const ln = lines[i];
-    if (ln.startsWith('```')) { inFence = !inFence; continue; }
-    if (inFence) continue;
-    const m = HEADING_RE.exec(ln);
-    if (!m) continue;
-    if (slugifyHeading(m[2]) === anchor) {
-      start = i;
-      startLevel = Math.max(m[1].length, 2);
-      break;
-    }
-  }
-  if (start < 0) return [body, false];
-  const out = [lines[start]];
-  inFence = false;
-  for (let j = start + 1; j < lines.length; j += 1) {
-    const ln = lines[j];
-    if (ln.startsWith('```')) { inFence = !inFence; out.push(ln); continue; }
-    if (inFence) { out.push(ln); continue; }
-    const m = HEADING_RE.exec(ln);
-    if (m && m[1].length <= startLevel) break;
-    out.push(ln);
-  }
-  while (out.length && out[out.length - 1].trim() === '') out.pop();
-  return [`${out.join('\n')}\n`, true];
-}
-
 // ---- the endpoints -----------------------------------------------------------------------
 
 function findDocPage(pageId) {
@@ -523,23 +491,20 @@ function glossary(state, page) {
  * what gates the github-shaped deep links in the UI. Both come from `originDisplay()`,
  * which shells out to `git remote get-url` (the `git` row in `ALLOWED_SPAWNS`).
  *
- * `version` IS NOT WHAT IT LOOKS LIKE, and it is the shape this page has always had rather than
- * a shortcut here. It reads a `version` key off the status snapshot and THERE IS NO SUCH KEY —
- * the snapshot spells the fingerprints `source_fp` / `installed_fp` / `version_verdict`. So the
- * field is `{}`, always, and `sd.version || {}` reproduces the EXPRESSION rather than the
- * constant: if the key ever appears, the page gains it without another edit.
+ * `version` carries the status snapshot's fingerprints under the names the About page reads.
+ * It used to read a `version` key the snapshot never had, so the page's build rows were
+ * always empty; the snapshot spells them `installed_fp` / `source_fp` / `version_verdict`.
  *
  * THERE IS NO INTERPRETER FIELD, and the absence is deliberate — see `apiSetup` in
  * `api.mjs`, which spells the same absence for the same reason.
- *
- * `statusData()` is called for one dead field, and deliberately: this page has always paid that
- * cost, and skipping it would answer faster in a way no gate measures and no user asked for.
  */
 function about(state) {
   const sd = statusData();
   const od = originDisplay();
   return {
-    version: sd.version || {},
+    version: {
+      installed_fp: sd.installed_fp, source_fp: sd.source_fp, verdict: sd.version_verdict,
+    },
     theme: state.theme,
     emit: state.emit,
     deployed: deployed(state),
@@ -590,18 +555,10 @@ export function apiDocsPage(state, pageId, harnessName = null) {
  */
 const KIND_ROUTES = {
   markdown: (state, pageId, page, hn) => {
-    let body = readDocSource(page.source);
-    let anchor = page.anchor ?? null;
-    // A successful slice drops the anchor: the heading is already at the top, so the
-    // client must not also try to scroll to it.
-    if (anchor && page.slice) {
-      const [sliced, ok] = sliceSection(body, anchor);
-      body = sliced;
-      if (ok) anchor = null;
-    }
-    body = rewriteDocLinks(stripHarnessBlocks(body, hn), page.source, idsByRel());
+    const body = rewriteDocLinks(stripHarnessBlocks(readDocSource(page.source), hn),
+      page.source, idsByRel());
     return { id: pageId, title: page.title, kind: 'markdown', body,
-      source: page.source, anchor, links: resolveLinks(state, body) };
+      source: page.source, links: resolveLinks(state, body) };
   },
   concept: (state, pageId, page, hn) => {
     const body = rewriteDocLinks(subCounts(state, stripHarnessBlocks(page.body ?? '', hn)),

package/package.json

@@ -1,7 +1,7 @@
 {
   "//": "Every field here is argued and gated in tests/unit/package_manifest.test.mjs. `files`, `bin` and `engines` each have a test that fails when reality drifts from this file; `version` mirrors harness.config.json and is gated too. Read that docblock before editing this one.",
   "name": "geneseed",
-  "version": "3.13.0",
+  "version": "3.14.0",
   "description": "A portable, theme-able harness you implant once and use everywhere to grow a disciplined AI coding agent.",
   "keywords": [
     "ai",

package/web/dist/assets/Activity-CjRqZnr-.js

@@ -0,0 +1 @@
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package/web/dist/assets/ActivityDetail-OQTxKBj2.js

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+import{s as e}from"./sections-GalMS0Zv.js";import{i as t,t as n}from"./react-B9Z_tXRV.js";import{t as r}from"./api-D_ixdyEY.js";import{N as i,k as a,y as o}from"./index-KHt3wE_K.js";import{a as s,n as c,o as l,r as u,t as d}from"./activity-Dr7ZMBI3.js";import{t as f}from"./usePoll-DD8VjtSg.js";var p=e(t(),1),m=n();function h(e){return e.kind===`tool`?e.status===`error`?`bad`:e.status===`completed`?`ok`:`acc`:{retry:`warn`,error:`bad`,subtask:`acc`,text:`acc`}[e.kind]||``}function g({rec:e}){let t=e.who===`you`,n=[];t||(e.kind===`tool`&&e.ms!=null&&n.push(`${(e.ms/1e3).toFixed(1)}s`),e.kind===`step`&&(e.tokens&&n.push(`${l(e.tokens)} tok`),e.cost&&n.push(`$${e.cost.toFixed(2)}`)),e.kind===`subtask`&&e.agent&&n.unshift(e.agent));let r=!t&&(e.kind===`text`||e.kind===`thinking`||e.kind===`step`),i=t?e.text:e.label||e.snippet||e.kind;return(0,m.jsxs)(`div`,{className:`row gap-10`,style:{alignItems:`baseline`},children:[(0,m.jsx)(`span`,{className:`badge 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package/web/dist/assets/Dashboard-J-xCe_Gk.js

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package/web/dist/assets/FilterInput-CVyqmYWM.js

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package/web/dist/assets/Installs-MWuhNjSm.js

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