generic-ui-core 2.4.0 → 2.5.0-rc1

package/dist/index.d.ts

@@ -16,6 +16,66 @@ declare module 'generic-ui-core' {
   
   /* From src/constants/FieldTypes.d.ts */
   /* export default FieldTypes */
+  /**
+   * @file Frozen map of all field type string constants used in generic UI templates.
+   * @module FieldTypes
+   * @example
+   * import { FieldTypes } from 'generic-ui-core';
+   *
+   * if (field.type === FieldTypes.F_SELECT) { ... }
+   */
+  /**
+   * String constants identifying every supported field type in a generic UI template.
+   *
+   * **Deletion marker types** (used internally by the template editor):
+   * - `DEL_LAYER`, `DEL_FIELD`, `DEL_SELECT`, `DEL_OPTION`
+   *
+   * **Input field types** (`F_*`):
+   * - `F_CHECKBOX` — Boolean checkbox
+   * - `F_DATE` — Date picker
+   * - `F_DATETIME` — Date + time picker
+   * - `F_DATETIME_RANGE` — Date/time range
+   * - `F_DRAG` — Generic drag target
+   * - `F_DRAG_ELEMENT` — Drag target for elements
+   * - `F_DRAG_MOLECULE` — Drag target for molecules
+   * - `F_DRAG_SAMPLE` — Drag target for samples
+   * - `F_DRAG_REACTION` — Drag target for reactions
+   * - `F_DUMMY` — Placeholder / spacer
+   * - `F_FORMULA_FIELD` — Computed formula field
+   * - `F_INPUT_GROUP` — Group of fields rendered inline
+   * - `F_INTEGER` — Integer number input (deprecated)
+   * - `F_LABEL` — Read-only label/text
+   * - `F_NUMBER` — Decimal number input
+   * - `F_ONTOLOGY_SELECT` — Ontology term selector
+   * - `F_SELECT` — Single-value dropdown select
+   * - `F_SELECT_MULTI` — Multi-value dropdown select
+   * - `F_SYS_REACTION` — System-managed reaction field
+   * - `F_SYSTEM_DEFINED` — System-defined read-only field
+   * - `F_TABLE` — Tabular data
+   * - `F_TEXT` — Single-line text
+   * - `F_TEXTAREA` — Multi-line text
+   * - `F_TEXT_FORMULA` — Combined Text with optional separator
+   * - `F_UPLOAD` — File upload
+   * - `F_WF_NEXT` — Workflow "Next Step"
+   *
+   * **Virtual value types** (`V_*`):
+   * - `V_BOOLEAN` — Represents a boolean value type
+   * - `V_UNDEFINED` — Represents an explicitly undefined value type
+   *
+   * @type {Readonly<{
+   *   DEL_LAYER: 'Layer', DEL_FIELD: 'Field', DEL_SELECT: 'Select', DEL_OPTION: 'Option',
+   *   F_CHECKBOX: 'checkbox', F_DATE: 'date', F_DATETIME: 'datetime',
+   *   F_DATETIME_RANGE: 'datetime-range', F_DRAG: 'drag', F_DRAG_ELEMENT: 'drag_element',
+   *   F_DRAG_MOLECULE: 'drag_molecule', F_DRAG_SAMPLE: 'drag_sample',
+   *   F_DRAG_REACTION: 'drag_reaction', F_DUMMY: 'dummy', F_FORMULA_FIELD: 'formula-field',
+   *   F_INPUT_GROUP: 'input-group', F_INTEGER: 'integer', F_LABEL: 'label',
+   *   F_NUMBER: 'number', F_ONTOLOGY_SELECT: 'ontology-select', F_SELECT: 'select',
+   *   F_SELECT_MULTI: 'select-multi', F_SYS_REACTION: 'sys-reaction',
+   *   F_SYSTEM_DEFINED: 'system-defined', F_TABLE: 'table', F_TEXT: 'text',
+   *   F_TEXTAREA: 'textarea', F_TEXT_FORMULA: 'text-formula', F_UPLOAD: 'upload',
+   *   F_WF_NEXT: 'wf-next', V_BOOLEAN: 'boolean', V_UNDEFINED: 'undefined'
+   * }>}
+   */
   declare const FieldTypes: Readonly<{
       DEL_LAYER: "Layer";
       DEL_FIELD: "Field";
@@ -54,20 +114,60 @@ declare module 'generic-ui-core' {
   
   /* From src/constants/OptionMaps.d.ts */
   /* export default OptionMaps */
+  /**
+   * @file Frozen map of option lists for molecule and sample table column selectors.
+   * @module OptionMaps
+   * @example
+   * import { OptionMaps } from 'generic-ui-core';
+   *
+   * const moleculeCols = OptionMaps.TBL_OPTS_MOLECULE;
+   */
+  /**
+   * Predefined column option lists for table fields that reference molecules or samples.
+   * Each entry in an option list is a `{ label, value }` pair suitable for a select control.
+   *
+   * - **`TBL_OPTS_MOLECULE`** — Column options when a table field is linked to a molecule:
+   *   `InChiKey`, `SMILES`, `IUPAC`, `Mass`
+   * - **`TBL_OPTS_SAMPLE`** — Column options when a table field is linked to a sample:
+   *   `Name`, `Ext. Label`, `Mass`
+   *
+   * @type {Readonly<{
+   *   TBL_OPTS_MOLECULE: Array<{label: string, value: string}>,
+   *   TBL_OPTS_SAMPLE:   Array<{label: string, value: string}>
+   * }>}
+   */
   declare const OptionMaps: Readonly<{
-      TBL_OPTS_MOLECULE: {
+      TBL_OPTS_MOLECULE: Array<{
           label: string;
           value: string;
-      }[];
-      TBL_OPTS_SAMPLE: {
+      }>;
+      TBL_OPTS_SAMPLE: Array<{
           label: string;
           value: string;
-      }[];
+      }>;
   }>;
   
   
   /* From src/constants/WorkflowTypes.d.ts */
   /* export default WorkflowTypes */
+  /**
+   * @file Frozen map of node type string constants for generic UI workflow graphs.
+   * @module WorkflowTypes
+   * @example
+   * import { WorkflowTypes } from 'generic-ui-core';
+   *
+   * if (node.type === WorkflowTypes.ND_DEFAULT) { ... }
+   */
+  /**
+   * String constants identifying the supported node types in a generic UI workflow graph.
+   *
+   * - **`ND_INPUT`** (`"input"`) — The workflow entry/start node.
+   * - **`ND_OUTPUT`** (`"output"`) — The workflow exit/end node.
+   * - **`ND_DEFAULT`** (`"default"`) — A regular workflow step node, typically associated
+   *   with a layer via its `data.lKey` property.
+   *
+   * @type {Readonly<{ ND_INPUT: 'input', ND_OUTPUT: 'output', ND_DEFAULT: 'default' }>}
+   */
   declare const WorkflowTypes: Readonly<{
       ND_INPUT: "input";
       ND_OUTPUT: "output";
@@ -76,53 +176,302 @@ declare module 'generic-ui-core' {
   
   
   /* From src/kits/common.d.ts */
-  export function downloadFile(_file: any): void;
-  export function swapAryEls(_ary: any, idx1: any, idx2: any): any[];
-  export function buildTS(_ontology: any): string;
-  export function buildTSS(_q: any): string;
+  export function downloadFile(_file: FileDescriptor): void;
+  export function swapAryEls<T>(_ary: T[], idx1: number, idx2: number): T[];
+  export function buildTS(_ontology: OntologyTerm): string | null;
+  export function buildTSS(_q: string): string | null;
   
   
   /* From src/kits/cond-util.d.ts */
-  export const defaultCondOperator: 1;
-  export const condOperatorOptions: {
+  /**
+   * @file Condition operator constants and helpers.
+   * @module cond-util
+   * @example
+   * import { defaultCondOperator, condOperatorOptions, getCondOperator } from 'generic-ui-core';
+   *
+   * const label = getCondOperator[1]; // "Match One"
+   */
+  /**
+   * The default condition operator value used when none is specified.
+   * Corresponds to "Match One" (ANY) semantics.
+   *
+   * @type {number}
+   */
+  export const defaultCondOperator: number;
+  /**
+   * Ordered list of condition operator options, suitable for use in a select/dropdown.
+   * Each entry contains a human-readable `label` and the numeric `value` used internally.
+   *
+   * | Value | Label       | Semantics                          |
+   * |-------|-------------|------------------------------------|
+   * | `1`   | Match One   | At least one condition must match  |
+   * | `9`   | Match All   | Every condition must match         |
+   * | `0`   | Match None  | No condition must match            |
+   *
+   * @type {Array<{label: string, value: number}>}
+   */
+  export const condOperatorOptions: Array<{
       label: string;
       value: number;
-  }[];
-  export const getCondOperator: {
-      [k: string]: string;
-  };
+  }>;
+  /**
+   * A lookup map from condition operator numeric value to its human-readable label.
+   *
+   * @type {Record<number, string>}
+   * @example
+   * getCondOperator[1]; // "Match One"
+   * getCondOperator[9]; // "Match All"
+   * getCondOperator[0]; // "Match None"
+   */
+  export const getCondOperator: Record<number, string>;
   
   
   /* From src/kits/order-util.d.ts */
-  export function moveLayer(layers: any, sourceKey: any, targetKey: any): any;
-  export function moveField(fields: any, sourceKey: any, targetKey: any): any;
+  export function moveLayer(layers: LayerMap, sourceKey: string, targetKey: string): LayerMap;
+  export function moveField(fields: Field[], sourceKey: string, targetKey: string): Field[];
   
   
   /* From src/kits/template.d.ts */
-  export function clsInputGroup(el: any): any;
+  /**
+   * Clears the text values of all `text` fields inside every `input-group` field
+   * in the element's template. Mutates the element in place and returns it.
+   *
+   * @param {GenericElement | null | undefined} el - The generic UI element to process.
+   * @returns {GenericElement | null | undefined} The same element with cleared input-group's fields,
+   *   or the original value if `el` is falsy.
+   */
+  export function clsInputGroup(el: GenericElement | null | undefined): GenericElement | null | undefined;
+  /**
+   * Returns `data` if it is a non-empty string, otherwise returns the fallback.
+   *
+   * @param {*}      data       - The value to check.
+   * @param {string} [spec='']  - The fallback value to use when `data` is absent or blank.
+   * @returns {string} Either `data` (when it is a non-empty string) or `spec`.
+   */
   export function replaceData(data: any, spec?: string): string;
-  export function resetProperties(_props: any): any;
-  export function absOlsTermId(val: any): any;
-  export function absOlsTermLabel(val: any): any;
-  export function showProperties(dataObj: any, layers: any, source?: {}): any[];
-  export function orgLayerObject(_layers?: any[]): any;
-  export function isLayerVisible(layer: any, layers: any): any;
+  export function resetProperties(_props: PropertiesTemplate | null | undefined): PropertiesTemplate | null | undefined;
+  export function absOlsTermId(val: string | null | undefined): string;
+  export function absOlsTermLabel(val: string | null | undefined): string | undefined;
+  export function showProperties(dataObj: {
+      cond_fields?: CondField[];
+      cond_operator?: number;
+  }, layers: LayerMap, source?: any): [boolean, string];
+  export function orgLayerObject(_layers?: Layer[]): LayerMap;
+  export function isLayerVisible(layer: Layer, layers: LayerMap): boolean;
   
   
   /* From src/kits/unit.d.ts */
-  export const convertUnits: any;
-  export function getUnitSystem(externalUnits?: {}): any;
+  /**
+   * Converts a value between compatible units.
+   *
+   * @type {typeof convert}
+   */
+  export const convertUnits: typeof convert;
+  export function getUnitSystem(externalUnits?: Record<string, object>): object;
+  export function normalizeValue(measure: string, unit: string, value: string | number | null | undefined): number;
   export { genUnit, genUnits, unitConversion, reUnit };
   
   
   /* From src/kits/vis-util.d.ts */
-  export function isFieldEffectivelyVisible(field: any, layer: any, allLayers: any, checkedFields?: Set<any>, refElement?: any): any[];
-  export function isItemEffectivelyVisible(item: any, allLayers: any, refElement?: any): any[];
+  export function isFieldEffectivelyVisible(field: Field, layer: Layer, allLayers: LayerMap, checkedFields?: Set<string>, refElement?: any): VisibilityResult;
+  export function isItemEffectivelyVisible(item: {
+      cond_fields?: CondField[];
+      cond_operator?: number;
+      cond?: Array<{
+          eq?: any;
+          value?: any;
+          [key: string]: any;
+      }>;
+      op?: number;
+  }, allLayers: LayerMap, refElement?: any): VisibilityResult;
   
   
   /* From src/kits/workflow.d.ts */
-  export function isLayerInWF(_element: any, _layerKey: any): boolean;
-  export function storeFlow(props: any): any;
+  /**
+   * Checks whether a layer is referenced as a node in the element's workflow graph.
+   *
+   * @param {GenericElement} _element  - The generic UI element containing the workflow.
+   * @param {string}         _layerKey - The layer key to look for in the workflow.
+   * @returns {boolean} `true` if the layer appears as a default workflow node, `false` otherwise.
+   */
+  export function isLayerInWF(_element: GenericElement, _layerKey: string): boolean;
+  /**
+   * Serialises the workflow elements for storage by stripping transient display
+   * properties (`label`, `layer`) from default-type nodes.
+   *
+   * @param {{ elements: object[] }} props - An object containing the workflow `elements` array.
+   * @returns {object[]} A deep-cloned array of workflow elements with display properties removed.
+   */
+  export function storeFlow(props: {
+      elements: object[];
+  }): object[];
+  
+  
+  /* From src/types.d.ts */
+  /**
+   * A single visibility/restriction condition that references another field.
+   */
+  type CondField = {
+      /**
+       * - Key of the layer that owns the dependency field.
+       */
+      layer: string;
+      /**
+       * - Key of the dependency field to evaluate.
+       */
+      field: string;
+      /**
+       * - Expected value to match against the dependency field's current value.
+       */
+      value: any;
+      /**
+       * - Optional alternative label surfaced when this condition is met.
+       */
+      label?: string;
+  };
+  /**
+   * A generic UI field definition within a layer.
+   */
+  type Field = {
+      /**
+       * - Unique field key within its layer.
+       */
+      field: string;
+      /**
+       * - Field type string (see {@link FieldTypes}).
+       */
+      type: string;
+      /**
+       * - Human-readable display label.
+       */
+      label?: string;
+      /**
+       * - Current runtime value of the field.
+       */
+      value?: any;
+      /**
+       * - Render order (assigned in multiples of 10).
+       */
+      position?: number;
+      /**
+       * - Conditions that control this field's visibility.
+       */
+      cond_fields?: CondField[];
+      /**
+       * - How conditions are combined: 1=ANY, 9=ALL, 0=NONE.
+       */
+      cond_operator?: number;
+      /**
+       * - Nested fields, used by the `input-group` type.
+       */
+      sub_fields?: Field[];
+      /**
+       * - Row data, used by the `table` type.
+       */
+      sub_values?: any[];
+  };
+  /**
+   * A layer (section/group) in a generic UI template.
+   */
+  type Layer = {
+      /**
+       * - Unique layer key within the template.
+       */
+      key: string;
+      /**
+       * - Human-readable display label.
+       */
+      label?: string;
+      /**
+       * - Ordered list of fields within this layer.
+       */
+      fields: Field[];
+      /**
+       * - Render order (assigned in multiples of 10).
+       */
+      position?: number;
+      /**
+       * - Conditions that control the layer's own visibility.
+       */
+      cond_fields?: CondField[];
+      /**
+       * - How layer conditions are combined: 1=ANY, 9=ALL, 0=NONE.
+       */
+      cond_operator?: number;
+      /**
+       * - AI-generated suggestions; reset to `[]` on element clone.
+       */
+      ai?: any[];
+      /**
+       * - Legacy group-restriction conditions (older data shape).
+       */
+      cond?: any[];
+      /**
+       * - Legacy group-restriction operator (older data shape).
+       */
+      op?: number;
+  };
+  /**
+   * A map of layers keyed by their layer key string.
+   */
+  type LayerMap = Record<string, Layer>;
+  /**
+   * The full properties template attached to a generic UI element.
+   */
+  type PropertiesTemplate = {
+      /**
+       * - All layers in the template, keyed by layer key.
+       */
+      layers: LayerMap;
+      /**
+       * - Optional workflow graph data.
+       */
+      flow?: any;
+  };
+  /**
+   * A generic UI element (e.g. a sample, reaction, or research item).
+   */
+  type GenericElement = {
+      /**
+       * - The UI template attached to this element.
+       */
+      properties_template: PropertiesTemplate;
+  };
+  /**
+   * An ontology term reference used to build Terminology Service URLs.
+   */
+  type OntologyTerm = {
+      /**
+       * - Full IRI of the ontology term.
+       */
+      iri: string;
+      /**
+       * - Short ontology prefix (e.g. `"CHEBI"`, `"OBI"`).
+       */
+      ontology_prefix: string;
+      /**
+       * - Term class: `"class"`, `"property"`, or `"individual"`.
+       */
+      type: string;
+  };
+  /**
+   * A file descriptor used by {@link downloadFile}.
+   */
+  type FileDescriptor = {
+      /**
+       * - Desired filename for the downloaded file.
+       */
+      name: string;
+      /**
+       * - Data URL or object URL representing the file content.
+       */
+      contents: string;
+  };
+  /**
+   * - Index 0: `true` if the item is visible, `false` if it should be hidden.
+   * - Index 1: An alternative label string (empty string when not applicable).
+   */
+  type VisibilityResult = [boolean, string];
   
   
 }

package/dist/index.mjs

@@ -1 +1 @@
-import{convert as t,genUnit as e,genUnits as r,genUnitsSystem as n,reUnit as o,unitConversion as a}from"chem-units";var i=Object.create,u=Object.defineProperty,c=Object.getOwnPropertyDescriptor,s=Object.getOwnPropertyNames,l=Object.getPrototypeOf,f=Object.prototype.hasOwnProperty,p=(t,e)=>()=>(e||(t((e={exports:{}}).exports,e),t=null),e.exports),v=(t,e,r)=>(r=null!=t?i(l(t)):{},((t,e,r,n)=>{if(e&&"object"==typeof e||"function"==typeof e)for(var o,a=s(e),i=0,l=a.length;i<l;i++)o=a[i],f.call(t,o)||o===r||u(t,o,{get:(t=>e[t]).bind(null,o),enumerable:!(n=c(e,o))||n.enumerable});return t})(!e&&t&&t.__esModule?r:u(r,"default",{value:t,enumerable:!0}),t)),b=Object.freeze({DEL_LAYER:"Layer",DEL_FIELD:"Field",DEL_SELECT:"Select",DEL_OPTION:"Option",F_CHECKBOX:"checkbox",F_DATE:"date",F_DATETIME:"datetime",F_DATETIME_RANGE:"datetime-range",F_DRAG:"drag",F_DRAG_ELEMENT:"drag_element",F_DRAG_MOLECULE:"drag_molecule",F_DRAG_SAMPLE:"drag_sample",F_DRAG_REACTION:"drag_reaction",F_DUMMY:"dummy",F_FORMULA_FIELD:"formula-field",F_INPUT_GROUP:"input-group",F_INTEGER:"integer",F_LABEL:"label",F_NUMBER:"number",F_ONTOLOGY_SELECT:"ontology-select",F_SELECT:"select",F_SELECT_MULTI:"select-multi",F_SYS_REACTION:"sys-reaction",F_SYSTEM_DEFINED:"system-defined",F_TABLE:"table",F_TEXT:"text",F_TEXTAREA:"textarea",F_TEXT_FORMULA:"text-formula",F_UPLOAD:"upload",F_WF_NEXT:"wf-next",V_BOOLEAN:"boolean",V_UNDEFINED:"undefined"}),y=Object.freeze({TBL_OPTS_MOLECULE:[{label:"InChiKey",value:"inchikey"},{label:"SMILES",value:"smiles"},{label:"IUPAC",value:"iupac"},{label:"Mass",value:"molecular_weight"}],TBL_OPTS_SAMPLE:[{label:"Name",value:"name"},{label:"Ext. Label",value:"external_label"},{label:"Mass",value:"molecular_weight"}]}),d={base:"https://api.terminology.tib.eu/api",ui:"https://terminology.tib.eu/ts"},_={class:"terms",property:"props",individual:"individuals"},h="NFDI4CHEM",x=["rows=30","schema=collection","type=class","type=property","obsoletes=false","local=false","fieldList=id,iri,label,short_form,obo_id,ontology_name,ontology_prefix,description,type"].join("&"),j=t=>{const{contents:e,name:r}=t,n=document.createElement("a");n.download=r,n.href=e;const o=new MouseEvent("click",{view:window,bubbles:!0,cancelable:!0});n.dispatchEvent(o)},g=(t,e,r)=>{const n=[...t],o=n[e];return n[e]=n[r],n[r]=o,n},O=t=>{if(!t||"object"!=typeof t)return null;const{iri:e,ontology_prefix:r,type:n}=t;if(!(e&&r&&n&&_[n]))return null;const o=encodeURIComponent(e);return`${d.ui}/ontologies/${r}/${_[n]}?iri=${o}`},m=t=>!t||"string"!=typeof t||t.trim().length<2?null:`${d.base}/select?q=${t}&caller=${h}&${x}`,E=1,A=[{label:"Match One",value:1},{label:"Match 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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "generic-ui-core",
-  "version": "2.4.0",
+  "version": "2.5.0-rc1",
   "module": "dist/index.mjs",
   "types": "dist/index.d.ts",
   "exports": {
@@ -42,21 +42,22 @@
   "devDependencies": {
     "@eslint/js": "^10.0.1",
     "@vitest/coverage-v8": "^4.1.1",
+    "@vitest/eslint-plugin": "^1.3.20",
     "eslint": "^10.3.0",
     "eslint-config-prettier": "^10.1.8",
     "eslint-plugin-import-x": "^4.16.2",
+    "eslint-plugin-jsdoc": "^62.9.0",
     "eslint-plugin-prettier": "^5.5.4",
-    "@vitest/eslint-plugin": "^1.3.20",
     "globals": "^17.0.0",
     "happy-dom": "^20.1.0",
     "prettier": "^3.5.3",
     "terser": "^5.44.1",
     "typescript": "^6.0.3",
-    "vite": "^8.0.0",
+    "vite": "^8.0.16",
     "vitest": "^4.1.1"
   },
   "dependencies": {
-    "chem-units": "^2.1.0",
+    "chem-units": "^2.2.0-rc3",
     "lodash": "^4.17.21"
   }
 }