funolio-agent 1.0.7 → 1.0.48

package/dist/summarization-pipeline.js.map

@@ -1 +1 @@
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package/dist/tool-permissions.d.ts

@@ -0,0 +1,2 @@
+export declare function normalizeConfiguredToolNames(toolNames?: string[]): string[] | undefined;
+//# sourceMappingURL=tool-permissions.d.ts.map

package/dist/tool-permissions.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"tool-permissions.d.ts","sourceRoot":"","sources":["../src/tool-permissions.ts"],"names":[],"mappings":"AAAA,wBAAgB,4BAA4B,CAAC,SAAS,CAAC,EAAE,MAAM,EAAE,GAAG,MAAM,EAAE,GAAG,SAAS,CAoBvF"}

package/dist/tool-permissions.js

@@ -0,0 +1,25 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.normalizeConfiguredToolNames = normalizeConfiguredToolNames;
+function normalizeConfiguredToolNames(toolNames) {
+    if (!Array.isArray(toolNames))
+        return undefined;
+    const aliasMap = {
+        shell_exec: ["run_command"],
+        command_run: ["run_command", "git_status", "git_diff", "git_commit"],
+        file_read: ["read_file"],
+        directory_scan: ["list_directory"],
+        file_write: ["write_file", "edit_file"],
+        git_ops: ["git_status", "git_diff", "git_commit"],
+    };
+    const expanded = toolNames.flatMap((toolName) => {
+        if (typeof toolName !== 'string')
+            return [];
+        const trimmed = toolName.trim();
+        if (!trimmed)
+            return [];
+        return aliasMap[trimmed] || [trimmed];
+    });
+    return [...new Set(expanded)];
+}
+//# sourceMappingURL=tool-permissions.js.map

package/dist/tool-permissions.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"tool-permissions.js","sourceRoot":"","sources":["../src/tool-permissions.ts"],"names":[],"mappings":";;AAAA,oEAoBC;AApBD,SAAgB,4BAA4B,CAAC,SAAoB;IAC/D,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,SAAS,CAAC;QAAE,OAAO,SAAS,CAAC;IAEhD,MAAM,QAAQ,GAA6B;QACzC,UAAU,EAAE,CAAC,aAAa,CAAC;QAC3B,WAAW,EAAE,CAAC,aAAa,EAAE,YAAY,EAAE,UAAU,EAAE,YAAY,CAAC;QACpE,SAAS,EAAE,CAAC,WAAW,CAAC;QACxB,cAAc,EAAE,CAAC,gBAAgB,CAAC;QAClC,UAAU,EAAE,CAAC,YAAY,EAAE,WAAW,CAAC;QACvC,OAAO,EAAE,CAAC,YAAY,EAAE,UAAU,EAAE,YAAY,CAAC;KAClD,CAAC;IAEF,MAAM,QAAQ,GAAG,SAAS,CAAC,OAAO,CAAC,CAAC,QAAQ,EAAE,EAAE;QAC9C,IAAI,OAAO,QAAQ,KAAK,QAAQ;YAAE,OAAO,EAAE,CAAC;QAC5C,MAAM,OAAO,GAAG,QAAQ,CAAC,IAAI,EAAE,CAAC;QAChC,IAAI,CAAC,OAAO;YAAE,OAAO,EAAE,CAAC;QACxB,OAAO,QAAQ,CAAC,OAAO,CAAC,IAAI,CAAC,OAAO,CAAC,CAAC;IACxC,CAAC,CAAC,CAAC;IAEH,OAAO,CAAC,GAAG,IAAI,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC;AAChC,CAAC"}

package/dist/tools/analyze-image.js

@@ -62,7 +62,7 @@ exports.analyzeImageTool = {
     parameters: {
         type: 'object',
         properties: {
-            image_path: { type: 'string', description: 'Local file path to an image (sandboxed to project dir)' },
+            image_path: { type: 'string', description: 'Local file path to an image. Relative paths use the current workspace; absolute paths are allowed when project-only sandboxing is disabled.' },
             image_url: { type: 'string', description: 'Remote URL to an image' },
             prompt: { type: 'string', description: 'What to analyze (default: "Describe this image in detail")' },
         },
@@ -80,7 +80,7 @@ exports.analyzeImageTool = {
         // Build image content block
         let imageContent;
         if (imagePath) {
-            const resolved = (0, sandbox_1.resolveSandboxed)(ctx.projectDir, imagePath);
+            const resolved = (0, sandbox_1.resolveSandboxed)(ctx, imagePath);
             const ext = path.extname(resolved).slice(1).toLowerCase();
             if (!ALLOWED_EXTENSIONS.has(ext)) {
                 return fail(`Unsupported image extension: .${ext}. Allowed: ${[...ALLOWED_EXTENSIONS].join(', ')}`);

package/dist/tools/analyze-image.js.map

@@ -1 +1 @@
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package/dist/tools/edit-file.js

@@ -38,11 +38,11 @@ const fs = __importStar(require("fs"));
 const sandbox_1 = require("./sandbox");
 exports.editFileTool = {
     name: 'edit_file',
-    description: 'Edit a file by replacing exact text (search/replace). The old_string must match exactly.',
+    description: 'Edit a file by replacing exact text (search/replace). Relative paths resolve inside the current workspace; absolute paths are allowed when project-only sandboxing is disabled. The old_string must match exactly.',
     parameters: {
         type: 'object',
         properties: {
-            path: { type: 'string', description: 'File path relative to project root' },
+            path: { type: 'string', description: 'File path relative to the current workspace, or an absolute path when allowed' },
             old_string: { type: 'string', description: 'Exact text to find and replace' },
             new_string: { type: 'string', description: 'Replacement text' },
         },
@@ -53,7 +53,7 @@ exports.editFileTool = {
         const oldString = args.old_string;
         const newString = args.new_string;
         try {
-            const resolved = (0, sandbox_1.resolveSandboxed)(ctx.projectDir, filePath);
+            const resolved = (0, sandbox_1.resolveSandboxed)(ctx, filePath);
             await (0, sandbox_1.checkFileSize)(resolved, ctx.maxFileSize);
             const content = await fs.promises.readFile(resolved, 'utf-8');
             if (!content.includes(oldString)) {

package/dist/tools/edit-file.js.map

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+{"version":3,"file":"edit-file.js","sourceRoot":"","sources":["../../src/tools/edit-file.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,uCAAyB;AAEzB,uCAA4D;AAE/C,QAAA,YAAY,GAAmB;IAC1C,IAAI,EAAE,WAAW;IACjB,WAAW,EAAE,oNAAoN;IACjO,UAAU,EAAE;QACV,IAAI,EAAE,QAAQ;QACd,UAAU,EAAE;YACV,IAAI,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,EAAE,+EAA+E,EAAE;YACtH,UAAU,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,EAAE,gCAAgC,EAAE;YAC7E,UAAU,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,WAAW,EAAE,kBAAkB,EAAE;SAChE;QACD,QAAQ,EAAE,CAAC,MAAM,EAAE,YAAY,EAAE,YAAY,CAAC;KAC/C;IACD,KAAK,CAAC,OAAO,CAAC,IAA6B,EAAE,GAAgB;QAC3D,MAAM,QAAQ,GAAG,IAAI,CAAC,IAAc,CAAC;QACrC,MAAM,SAAS,GAAG,IAAI,CAAC,UAAoB,CAAC;QAC5C,MAAM,SAAS,GAAG,IAAI,CAAC,UAAoB,CAAC;QAE5C,IAAI,CAAC;YACH,MAAM,QAAQ,GAAG,IAAA,0BAAgB,EAAC,GAAG,EAAE,QAAQ,CAAC,CAAC;YACjD,MAAM,IAAA,uBAAa,EAAC,QAAQ,EAAE,GAAG,CAAC,WAAW,CAAC,CAAC;YAE/C,MAAM,OAAO,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,QAAQ,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAC;YAE9D,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,SAAS,CAAC,EAAE,CAAC;gBACjC,oEAAoE;gBACpE,MAAM,iBAAiB,GAAG,OAAO,CAAC,OAAO,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;gBACzD,MAAM,aAAa,GAAG,SAAS,CAAC,OAAO,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;gBACvD,MAAM,oBAAoB,GAAG,iBAAiB,CAAC,QAAQ,CAAC,aAAa,CAAC,CAAC;gBAEvE,+EAA+E;gBAC/E,MAAM,eAAe,GAAG,OAAO,CAAC,OAAO,CAAC,SAAS,EAAE,GAAG,CAAC,CAAC,OAAO,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;gBAC/E,MAAM,WAAW,GAAG,SAAS,CAAC,OAAO,CAAC,SAAS,EAAE,GAAG,CAAC,CAAC,OAAO,CAAC,OAAO,EAAE,IAAI,CAAC,CAAC;gBAC7E,MAAM,oBAAoB,GAAG,CAAC,oBAAoB,IAAI,eAAe,CAAC,QAAQ,CAAC,WAAW,CAAC,CAAC;gBAE5F,IAAI,IAAI,GAAG,gFAAgF,CAAC;gBAC5F,IAAI,oBAAoB,EAAE,CAAC;oBACzB,IAAI,IAAI,gHAAgH,CAAC;gBAC3H,CAAC;qBAAM,IAAI,oBAAoB,EAAE,CAAC;oBAChC,IAAI,IAAI,sIAAsI,CAAC;gBACjJ,CAAC;gBAED,OAAO;oBACL,YAAY,EAAE,EAAE;oBAChB,IAAI,EAAE,WAAW;oBACjB,OAAO,EAAE,KAAK;oBACd,MAAM,EAAE,EAAE;oBACV,KAAK,EAAE,2BAA2B,QAAQ,KAAK,IAAI,EAAE;oBACrD,QAAQ,EAAE,IAAI;oBACd,oBAAoB,EAAE,mCAAmC;iBAC1D,CAAC;YACJ,CAAC;YAED,iCAAiC;YACjC,MAAM,WAAW,GAAG,OAAO,CAAC,KAAK,CAAC,SAAS,CAAC,CAAC,MAAM,GAAG,CAAC,CAAC;YACxD,IAAI,WAAW,GAAG,CAAC,EAAE,CAAC;gBACpB,OAAO;oBACL,YAAY,EAAE,EAAE;oBAChB,IAAI,EAAE,WAAW;oBACjB,OAAO,EAAE,KAAK;oBACd,MAAM,EAAE,EAAE;oBACV,KAAK,EAAE,oBAAoB,WAAW,aAAa,QAAQ,oEAAoE;oBAC/H,QAAQ,EAAE,IAAI;oBACd,oBAAoB,EAAE,gBAAgB,WAAW,oBAAoB;iBACtE,CAAC;YACJ,CAAC;YAED,MAAM,UAAU,GAAG,OAAO,CAAC,OAAO,CAAC,SAAS,EAAE,SAAS,CAAC,CAAC;YACzD,MAAM,EAAE,CAAC,QAAQ,CAAC,SAAS,CAAC,QAAQ,EAAE,UAAU,EAAE,OAAO,CAAC,CAAC;YAE3D,4BAA4B;YAC5B,MAAM,QAAQ,GAAG,SAAS,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC;YAC9C,MAAM,QAAQ,GAAG,SAAS,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC;YAE9C,OAAO;gBACL,YAAY,EAAE,EAAE;gBAChB,IAAI,EAAE,WAAW;gBACjB,OAAO,EAAE,IAAI;gBACb,MAAM,EAAE,YAAY,QAAQ,iBAAiB,QAAQ,eAAe,QAAQ,EAAE;gBAC9E,IAAI,EAAE,OAAO,QAAQ,SAAS,QAAQ,MAAM,SAAS,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,MAAM,SAAS,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,IAAI,CAAC,KAAK,CAAC,EAAE;gBACtH,QAAQ,EAAE,KAAK,EAAE,uCAAuC;gBACxD,oBAAoB,EAAE,sBAAsB;aAC7C,CAAC;QACJ,CAAC;QAAC,OAAO,GAAY,EAAE,CAAC;YACtB,MAAM,GAAG,GAAG,GAAG,YAAY,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;YAC7D,OAAO;gBACL,YAAY,EAAE,EAAE;gBAChB,IAAI,EAAE,WAAW;gBACjB,OAAO,EAAE,KAAK;gBACd,MAAM,EAAE,EAAE;gBACV,KAAK,EAAE,GAAG;gBACV,QAAQ,EAAE,IAAI;gBACd,oBAAoB,EAAE,gBAAgB,GAAG,EAAE;aAC5C,CAAC;QACJ,CAAC;IACH,CAAC;CACF,CAAC"}

package/dist/tools/index.d.ts

@@ -4,14 +4,15 @@
  */
 import { ToolDefinition, ToolContext, ToolCall, ToolResult } from '../types';
 import { MCPManager } from '../mcp/manager';
-declare const BUILTIN_TOOLS: ToolDefinition[];
+import { AgentRuntimeMode } from '../runtime-context';
+declare function buildBuiltinTools(runtimeMode: AgentRuntimeMode): ToolDefinition[];
 /** Backward compat alias */
+declare const BUILTIN_TOOLS: ToolDefinition[];
 declare const ALL_TOOLS: ToolDefinition[];
-declare const toolMap: Map<string, ToolDefinition>;
 /**
  * Get tool definitions for LLM function calling schema.
  */
-export declare function getToolDefinitions(): Array<{
+export declare function getToolDefinitions(runtimeMode?: AgentRuntimeMode): Array<{
     name: string;
     description: string;
     parameters: Record<string, unknown>;
@@ -24,10 +25,7 @@ export declare function executeTool(call: ToolCall, ctx: ToolContext): Promise<T
  * Create a default tool context for a project.
  */
 export declare function createToolContext(projectDir: string, overrides?: Partial<ToolContext>): ToolContext;
-/**
- * Get all tool definitions including MCP tools (Phase 3J).
- */
-export declare function getAllToolDefinitions(mcpManager?: MCPManager): Array<{
+export declare function getAllToolDefinitions(runtimeModeOrMcpManager?: AgentRuntimeMode | MCPManager, maybeMcpManager?: MCPManager): Array<{
     name: string;
     description: string;
     parameters: Record<string, unknown>;
@@ -36,5 +34,6 @@ export declare function getAllToolDefinitions(mcpManager?: MCPManager): Array<{
  * Execute a tool call, checking MCP tools if not a builtin.
  */
 export declare function executeToolWithMCP(call: ToolCall, ctx: ToolContext, mcpManager?: MCPManager): Promise<ToolResult>;
-export { ALL_TOOLS, BUILTIN_TOOLS, toolMap };
+declare const toolMap: Map<string, ToolDefinition>;
+export { ALL_TOOLS, BUILTIN_TOOLS, toolMap, buildBuiltinTools };
 //# sourceMappingURL=index.d.ts.map

package/dist/tools/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/tools/index.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,cAAc,EAAE,WAAW,EAAE,QAAQ,EAAE,UAAU,EAAE,MAAM,UAAU,CAAC;AAuC7E,OAAO,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AAC5C,OAAO,EAAE,gBAAgB,EAAsE,MAAM,oBAAoB,CAAC;AAG1H,iBAAS,iBAAiB,CAAC,WAAW,EAAE,gBAAgB,GAAG,cAAc,EAAE,CAiD1E;AAED,4BAA4B;AAC5B,QAAA,MAAM,aAAa,EAAE,cAAc,EAA+C,CAAC;AACnF,QAAA,MAAM,SAAS,EAAE,cAAc,EAAkB,CAAC;AAMlD;;GAEG;AACH,wBAAgB,kBAAkB,CAAC,WAAW,CAAC,EAAE,gBAAgB,GAAG,KAAK,CAAC;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,WAAW,EAAE,MAAM,CAAC;IAAC,UAAU,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAA;CAAE,CAAC,CAOpJ;AAED;;GAEG;AACH,wBAAsB,WAAW,CAAC,IAAI,EAAE,QAAQ,EAAE,GAAG,EAAE,WAAW,GAAG,OAAO,CAAC,UAAU,CAAC,CAwBvF;AAED;;GAEG;AACH,wBAAgB,iBAAiB,CAAC,UAAU,EAAE,MAAM,EAAE,SAAS,CAAC,EAAE,OAAO,CAAC,WAAW,CAAC,GAAG,WAAW,CAenG;AAED,wBAAgB,qBAAqB,CACnC,uBAAuB,CAAC,EAAE,gBAAgB,GAAG,UAAU,EACvD,eAAe,CAAC,EAAE,UAAU,GAC3B,KAAK,CAAC;IAAE,IAAI,EAAE,MAAM,CAAC;IAAC,WAAW,EAAE,MAAM,CAAC;IAAC,UAAU,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAA;CAAE,CAAC,CAoBnF;AAED;;GAEG;AACH,wBAAsB,kBAAkB,CACtC,IAAI,EAAE,QAAQ,EACd,GAAG,EAAE,WAAW,EAChB,UAAU,CAAC,EAAE,UAAU,GACtB,OAAO,CAAC,UAAU,CAAC,CA6BrB;AAED,QAAA,MAAM,OAAO,6BAAsC,CAAC;AAEpD,OAAO,EAAE,SAAS,EAAE,aAAa,EAAE,OAAO,EAAE,iBAAiB,EAAE,CAAC"}

package/dist/tools/index.js

@@ -3,6 +3,39 @@
  * Phase 3D: Tool Execution Engine
  * Registry of all 8 tools with sandboxed execution.
  */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.toolMap = exports.BUILTIN_TOOLS = exports.ALL_TOOLS = void 0;
 exports.getToolDefinitions = getToolDefinitions;
@@ -10,6 +43,7 @@ exports.executeTool = executeTool;
 exports.createToolContext = createToolContext;
 exports.getAllToolDefinitions = getAllToolDefinitions;
 exports.executeToolWithMCP = executeToolWithMCP;
+exports.buildBuiltinTools = buildBuiltinTools;
 const config_1 = require("../config");
 const read_file_1 = require("./read-file");
 const write_file_1 = require("./write-file");
@@ -32,65 +66,72 @@ const notify_user_1 = require("./notify-user");
 const search_codebase_1 = require("./search-codebase");
 const admin_tools_1 = require("./admin-tools");
 const registry_shared_1 = require("../mcp/registry-shared");
-const local_db_1 = require("../local-db");
-const BUILTIN_TOOLS = [
-    read_file_1.readFileTool,
-    write_file_1.writeFileTool,
-    edit_file_1.editFileTool,
-    list_directory_1.listDirectoryTool,
-    run_command_1.runCommandTool,
-    git_tools_1.gitStatusTool,
-    git_tools_1.gitDiffTool,
-    git_tools_1.gitCommitTool,
-    ...((0, local_db_1.isLocalFirstEnabled)() ? [search_local_memory_1.searchLocalMemoryTool] : []),
-    web_search_1.webSearchTool,
-    web_fetch_1.webFetchTool,
-    schedule_task_1.scheduleTaskTool,
-    todo_tasks_1.listTasksTool,
-    todo_tasks_1.addTaskTool,
-    todo_tasks_1.checkTaskTool,
-    todo_tasks_1.editTaskTool,
-    todo_tasks_1.deleteTaskTool,
-    todo_tasks_1.completeWorkerTaskTool,
-    todo_tasks_1.blockWorkerTaskTool,
-    spawn_subagent_1.spawnSubAgentTool,
-    spawn_subagent_1.listSubAgentsTool,
-    search_marketplace_1.searchMarketplaceTool,
-    request_mcp_install_1.requestMcpInstallTool,
-    search_memory_1.searchMemoryTool,
-    analyze_image_1.analyzeImageTool,
-    notify_user_1.notifyUserTool,
-    search_codebase_1.searchCodebaseTool,
-    ...((0, local_db_1.isLocalFirstEnabled)() ? [project_tools_1.listProjectsTool, project_tools_1.createProjectTool, project_tools_1.listTopicsTool, project_tools_1.createTopicTool] : []),
-    ...((0, local_db_1.isLocalFirstEnabled)() ? [
-        admin_tools_1.getProjectOverviewTool,
-        admin_tools_1.listBotsTool,
-        admin_tools_1.listSettingsTool,
-        admin_tools_1.listProjectSettingsTool,
-        admin_tools_1.listWorkflowTemplatesTool,
-        admin_tools_1.getClerkConfigTool,
-        admin_tools_1.updateProjectTool,
-        admin_tools_1.assignBotToProjectTool,
-        admin_tools_1.setGlobalSettingTool,
-        admin_tools_1.setProjectSettingTool,
-        admin_tools_1.setClerkConfigTool,
-        admin_tools_1.createWorkflowTemplateTool,
-        admin_tools_1.updateWorkflowTemplateTool,
-        admin_tools_1.updateBotTool,
-        admin_tools_1.listAdminAuditTool,
-    ] : []),
-];
-exports.BUILTIN_TOOLS = BUILTIN_TOOLS;
+const runtime_context_1 = require("../runtime-context");
+const data = __importStar(require("../local-data"));
+function buildBuiltinTools(runtimeMode) {
+    const includeLocalDesktopTools = (0, runtime_context_1.isLocalDesktopRuntime)(runtimeMode);
+    return [
+        read_file_1.readFileTool,
+        write_file_1.writeFileTool,
+        edit_file_1.editFileTool,
+        list_directory_1.listDirectoryTool,
+        run_command_1.runCommandTool,
+        git_tools_1.gitStatusTool,
+        git_tools_1.gitDiffTool,
+        git_tools_1.gitCommitTool,
+        ...(includeLocalDesktopTools ? [search_local_memory_1.searchLocalMemoryTool] : []),
+        web_search_1.webSearchTool,
+        web_fetch_1.webFetchTool,
+        schedule_task_1.scheduleTaskTool,
+        todo_tasks_1.listTasksTool,
+        todo_tasks_1.addTaskTool,
+        todo_tasks_1.checkTaskTool,
+        todo_tasks_1.editTaskTool,
+        todo_tasks_1.deleteTaskTool,
+        todo_tasks_1.completeWorkerTaskTool,
+        todo_tasks_1.blockWorkerTaskTool,
+        spawn_subagent_1.spawnSubAgentTool,
+        spawn_subagent_1.listSubAgentsTool,
+        search_marketplace_1.searchMarketplaceTool,
+        request_mcp_install_1.requestMcpInstallTool,
+        search_memory_1.searchMemoryTool,
+        analyze_image_1.analyzeImageTool,
+        notify_user_1.notifyUserTool,
+        search_codebase_1.searchCodebaseTool,
+        ...(includeLocalDesktopTools ? [project_tools_1.listProjectsTool, project_tools_1.createProjectTool, project_tools_1.listTopicsTool, project_tools_1.createTopicTool] : []),
+        ...(includeLocalDesktopTools ? [
+            admin_tools_1.getProjectOverviewTool,
+            admin_tools_1.listBotsTool,
+            admin_tools_1.listSettingsTool,
+            admin_tools_1.listProjectSettingsTool,
+            admin_tools_1.listWorkflowTemplatesTool,
+            admin_tools_1.getClerkConfigTool,
+            admin_tools_1.updateProjectTool,
+            admin_tools_1.assignBotToProjectTool,
+            admin_tools_1.setGlobalSettingTool,
+            admin_tools_1.setProjectSettingTool,
+            admin_tools_1.setClerkConfigTool,
+            admin_tools_1.createWorkflowTemplateTool,
+            admin_tools_1.updateWorkflowTemplateTool,
+            admin_tools_1.updateBotTool,
+            admin_tools_1.listAdminAuditTool,
+        ] : []),
+    ];
+}
 /** Backward compat alias */
+const BUILTIN_TOOLS = buildBuiltinTools((0, runtime_context_1.getDefaultRuntimeMode)());
+exports.BUILTIN_TOOLS = BUILTIN_TOOLS;
 const ALL_TOOLS = BUILTIN_TOOLS;
 exports.ALL_TOOLS = ALL_TOOLS;
-const toolMap = new Map(ALL_TOOLS.map((t) => [t.name, t]));
-exports.toolMap = toolMap;
+function getToolMap(runtimeMode) {
+    return new Map(buildBuiltinTools(runtimeMode).map((t) => [t.name, t]));
+}
 /**
  * Get tool definitions for LLM function calling schema.
  */
-function getToolDefinitions() {
-    return ALL_TOOLS.map((t) => ({
+function getToolDefinitions(runtimeMode) {
+    const mode = (0, runtime_context_1.normalizeRuntimeMode)(runtimeMode || (0, runtime_context_1.getDefaultRuntimeMode)());
+    return buildBuiltinTools(mode).map((t) => ({
         name: t.name,
         description: t.description,
         parameters: t.parameters,
@@ -100,7 +141,7 @@ function getToolDefinitions() {
  * Execute a single tool call within the given context.
  */
 async function executeTool(call, ctx) {
-    const tool = toolMap.get(call.name);
+    const tool = getToolMap((0, runtime_context_1.normalizeRuntimeMode)(ctx.runtimeMode || (0, runtime_context_1.getDefaultRuntimeMode)())).get(call.name);
     if (!tool) {
         let errorMsg = `Unknown tool: ${call.name}`;
         const matchingServer = registry_shared_1.MCP_REGISTRY.find((entry) => entry.tools.some((t) => t === call.name));
@@ -126,8 +167,12 @@ async function executeTool(call, ctx) {
  */
 function createToolContext(projectDir, overrides) {
     const cfg = (0, config_1.loadConfig)();
+    const restrictFileAccessToProject = data.getSetting('llm_project_sandbox_only') === 'true';
+    const runtimeMode = (0, runtime_context_1.normalizeRuntimeMode)(overrides?.runtimeMode || (0, runtime_context_1.getDefaultRuntimeMode)());
     return {
         projectDir,
+        runtimeMode,
+        restrictFileAccessToProject,
         commandTimeout: 60,
         maxCommandTimeout: 300,
         maxFileSize: 1024 * 1024, // 1MB
@@ -136,11 +181,10 @@ function createToolContext(projectDir, overrides) {
         ...overrides,
     };
 }
-/**
- * Get all tool definitions including MCP tools (Phase 3J).
- */
-function getAllToolDefinitions(mcpManager) {
-    const builtinDefs = BUILTIN_TOOLS.map((t) => ({
+function getAllToolDefinitions(runtimeModeOrMcpManager, maybeMcpManager) {
+    const runtimeMode = (0, runtime_context_1.normalizeRuntimeMode)(typeof runtimeModeOrMcpManager === 'string' ? runtimeModeOrMcpManager : (0, runtime_context_1.getDefaultRuntimeMode)());
+    const mcpManager = typeof runtimeModeOrMcpManager === 'string' ? maybeMcpManager : runtimeModeOrMcpManager;
+    const builtinDefs = buildBuiltinTools(runtimeMode).map((t) => ({
         name: t.name,
         description: t.description,
         parameters: t.parameters,
@@ -159,7 +203,7 @@ function getAllToolDefinitions(mcpManager) {
  */
 async function executeToolWithMCP(call, ctx, mcpManager) {
     // Try builtin first
-    const tool = toolMap.get(call.name);
+    const tool = getToolMap((0, runtime_context_1.normalizeRuntimeMode)(ctx.runtimeMode || (0, runtime_context_1.getDefaultRuntimeMode)())).get(call.name);
     if (tool) {
         const result = await tool.execute(call.arguments, ctx);
         result.tool_call_id = call.id;
@@ -185,4 +229,6 @@ async function executeToolWithMCP(call, ctx, mcpManager) {
         verification_details: 'Tool not found',
     };
 }
+const toolMap = getToolMap((0, runtime_context_1.getDefaultRuntimeMode)());
+exports.toolMap = toolMap;
 //# sourceMappingURL=index.js.map

package/dist/tools/index.js.map

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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/tools/index.ts"],"names":[],"mappings":";AAAA;;;GAGG;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AA2GH,gDAOC;AAKD,kCAwBC;AAKD,8CAeC;AAED,sDAuBC;AAKD,gDAiCC;AAI2C,8CAAiB;AAnO7D,sCAAwD;AACxD,2CAA2C;AAC3C,6CAA6C;AAC7C,2CAA2C;AAC3C,qDAAqD;AACrD,+CAA+C;AAC/C,2CAAwE;AACxE,+DAA8D;AAC9D,6CAA6C;AAC7C,2CAA2C;AAC3C,mDAAmD;AACnD,6CAAoJ;AACpJ,mDAAuG;AACvG,qDAAwE;AACxE,6DAA6D;AAC7D,+DAA8D;AAC9D,mDAAmD;AACnD,mDAAmD;AACnD,+CAA+C;AAC/C,uDAAuD;AACvD,+CAgBuB;AACvB,4DAAsD;AAEtD,wDAA0H;AAC1H,oDAAsC;AAEtC,SAAS,iBAAiB,CAAC,WAA6B;IACtD,MAAM,wBAAwB,GAAG,IAAA,uCAAqB,EAAC,WAAW,CAAC,CAAC;IACpE,OAAO;QACP,wBAAY;QACZ,0BAAa;QACb,wBAAY;QACZ,kCAAiB;QACjB,4BAAc;QACd,yBAAa;QACb,uBAAW;QACX,yBAAa;QACb,GAAG,CAAC,wBAAwB,CAAC,CAAC,CAAC,CAAC,2CAAqB,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;QAC5D,0BAAa;QACb,wBAAY;QACZ,gCAAgB;QAChB,0BAAa;QACb,wBAAW;QACX,0BAAa;QACb,yBAAY;QACZ,2BAAc;QACd,mCAAsB;QACtB,gCAAmB;QACnB,kCAAiB;QACjB,kCAAiB;QACjB,0CAAqB;QACrB,2CAAqB;QACrB,gCAAgB;QAChB,gCAAgB;QAChB,4BAAc;QACd,oCAAkB;QAClB,GAAG,CAAC,wBAAwB,CAAC,CAAC,CAAC,CAAC,gCAAgB,EAAE,iCAAiB,EAAE,8BAAc,EAAE,+BAAe,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;QAC3G,GAAG,CAAC,wBAAwB,CAAC,CAAC,CAAC;YAC7B,oCAAsB;YACtB,0BAAY;YACZ,8BAAgB;YAChB,qCAAuB;YACvB,uCAAyB;YACzB,gCAAkB;YAClB,+BAAiB;YACjB,oCAAsB;YACtB,kCAAoB;YACpB,mCAAqB;YACrB,gCAAkB;YAClB,wCAA0B;YAC1B,wCAA0B;YAC1B,2BAAa;YACb,gCAAkB;SACnB,CAAC,CAAC,CAAC,EAAE,CAAC;KACN,CAAC;AACJ,CAAC;AAED,4BAA4B;AAC5B,MAAM,aAAa,GAAqB,iBAAiB,CAAC,IAAA,uCAAqB,GAAE,CAAC,CAAC;AAqI/D,sCAAa;AApIjC,MAAM,SAAS,GAAqB,aAAa,CAAC;AAoIzC,8BAAS;AAlIlB,SAAS,UAAU,CAAC,WAA6B;IAC/C,OAAO,IAAI,GAAG,CAAC,iBAAiB,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;AACzE,CAAC;AAED;;GAEG;AACH,SAAgB,kBAAkB,CAAC,WAA8B;IAC/D,MAAM,IAAI,GAAG,IAAA,sCAAoB,EAAC,WAAW,IAAI,IAAA,uCAAqB,GAAE,CAAC,CAAC;IAC1E,OAAO,iBAAiB,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;QACzC,IAAI,EAAE,CAAC,CAAC,IAAI;QACZ,WAAW,EAAE,CAAC,CAAC,WAAW;QAC1B,UAAU,EAAE,CAAC,CAAC,UAAU;KACzB,CAAC,CAAC,CAAC;AACN,CAAC;AAED;;GAEG;AACI,KAAK,UAAU,WAAW,CAAC,IAAc,EAAE,GAAgB;IAChE,MAAM,IAAI,GAAG,UAAU,CAAC,IAAA,sCAAoB,EAAC,GAAG,CAAC,WAAW,IAAI,IAAA,uCAAqB,GAAE,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACzG,IAAI,CAAC,IAAI,EAAE,CAAC;QACV,IAAI,QAAQ,GAAG,iBAAiB,IAAI,CAAC,IAAI,EAAE,CAAC;QAC5C,MAAM,cAAc,GAAG,8BAAY,CAAC,IAAI,CAAC,CAAC,KAAK,EAAE,EAAE,CACjD,KAAK,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,KAAK,IAAI,CAAC,IAAI,CAAC,CACzC,CAAC;QACF,IAAI,cAAc,EAAE,CAAC;YACnB,QAAQ,IAAI,oBAAoB,IAAI,CAAC,IAAI,2BAA2B,cAAc,CAAC,IAAI,wHAAwH,CAAC;QAClN,CAAC;QACD,OAAO;YACL,YAAY,EAAE,IAAI,CAAC,EAAE;YACrB,IAAI,EAAE,IAAI,CAAC,IAAI;YACf,OAAO,EAAE,KAAK;YACd,MAAM,EAAE,EAAE;YACV,KAAK,EAAE,QAAQ;YACf,QAAQ,EAAE,IAAI;YACd,oBAAoB,EAAE,gBAAgB;SACvC,CAAC;IACJ,CAAC;IAED,MAAM,MAAM,GAAG,MAAM,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,SAAS,EAAE,GAAG,CAAC,CAAC;IACvD,MAAM,CAAC,YAAY,GAAG,IAAI,CAAC,EAAE,CAAC;IAC9B,OAAO,MAAM,CAAC;AAChB,CAAC;AAED;;GAEG;AACH,SAAgB,iBAAiB,CAAC,UAAkB,EAAE,SAAgC;IACpF,MAAM,GAAG,GAAG,IAAA,mBAAU,GAAE,CAAC;IACzB,MAAM,2BAA2B,GAAG,IAAI,CAAC,UAAU,CAAC,0BAA0B,CAAC,KAAK,MAAM,CAAC;IAC3F,MAAM,WAAW,GAAG,IAAA,sCAAoB,EAAC,SAAS,EAAE,WAAW,IAAI,IAAA,uCAAqB,GAAE,CAAC,CAAC;IAC5F,OAAO;QACL,UAAU;QACV,WAAW;QACX,2BAA2B;QAC3B,cAAc,EAAE,EAAE;QAClB,iBAAiB,EAAE,GAAG;QACtB,WAAW,EAAE,IAAI,GAAG,IAAI,EAAE,MAAM;QAChC,MAAM,EAAE,GAAG,CAAC,IAAI,EAAE,KAAK,IAAI,OAAO,CAAC,GAAG,CAAC,eAAe,IAAI,EAAE;QAC5D,UAAU,EAAE,wBAAe;QAC3B,GAAG,SAAS;KACb,CAAC;AACJ,CAAC;AAED,SAAgB,qBAAqB,CACnC,uBAAuD,EACvD,eAA4B;IAE5B,MAAM,WAAW,GAAG,IAAA,sCAAoB,EACtC,OAAO,uBAAuB,KAAK,QAAQ,CAAC,CAAC,CAAC,uBAAuB,CAAC,CAAC,CAAC,IAAA,uCAAqB,GAAE,CAChG,CAAC;IACF,MAAM,UAAU,GAAG,OAAO,uBAAuB,KAAK,QAAQ,CAAC,CAAC,CAAC,eAAe,CAAC,CAAC,CAAC,uBAAuB,CAAC;IAC3G,MAAM,WAAW,GAAG,iBAAiB,CAAC,WAAW,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;QAC7D,IAAI,EAAE,CAAC,CAAC,IAAI;QACZ,WAAW,EAAE,CAAC,CAAC,WAAW;QAC1B,UAAU,EAAE,CAAC,CAAC,UAAU;KACzB,CAAC,CAAC,CAAC;IAEJ,IAAI,CAAC,UAAU;QAAE,OAAO,WAAW,CAAC;IAEpC,MAAM,OAAO,GAAG,UAAU,CAAC,kBAAkB,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;QAC1D,IAAI,EAAE,CAAC,CAAC,IAAI;QACZ,WAAW,EAAE,CAAC,CAAC,WAAW;QAC1B,UAAU,EAAE,CAAC,CAAC,UAAU;KACzB,CAAC,CAAC,CAAC;IAEJ,OAAO,CAAC,GAAG,WAAW,EAAE,GAAG,OAAO,CAAC,CAAC;AACtC,CAAC;AAED;;GAEG;AACI,KAAK,UAAU,kBAAkB,CACtC,IAAc,EACd,GAAgB,EAChB,UAAuB;IAEvB,oBAAoB;IACpB,MAAM,IAAI,GAAG,UAAU,CAAC,IAAA,sCAAoB,EAAC,GAAG,CAAC,WAAW,IAAI,IAAA,uCAAqB,GAAE,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACzG,IAAI,IAAI,EAAE,CAAC;QACT,MAAM,MAAM,GAAG,MAAM,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,SAAS,EAAE,GAAG,CAAC,CAAC;QACvD,MAAM,CAAC,YAAY,GAAG,IAAI,CAAC,EAAE,CAAC;QAC9B,OAAO,MAAM,CAAC;IAChB,CAAC;IAED,gBAAgB;IAChB,IAAI,UAAU,EAAE,CAAC;QACf,MAAM,QAAQ,GAAG,UAAU,CAAC,kBAAkB,EAAE,CAAC;QACjD,MAAM,OAAO,GAAG,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,IAAI,CAAC,IAAI,CAAC,CAAC;QAC3D,IAAI,OAAO,EAAE,CAAC;YACZ,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,OAAO,CAAC,IAAI,CAAC,SAAS,EAAE,GAAG,CAAC,CAAC;YAC1D,MAAM,CAAC,YAAY,GAAG,IAAI,CAAC,EAAE,CAAC;YAC9B,OAAO,MAAM,CAAC;QAChB,CAAC;IACH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package/dist/tools/list-directory.js

@@ -39,11 +39,11 @@ const path = __importStar(require("path"));
 const sandbox_1 = require("./sandbox");
 exports.listDirectoryTool = {
     name: 'list_directory',
-    description: 'List files and directories at a given path within the project.',
+    description: 'List files and directories at a given path. Relative paths resolve inside the current workspace; absolute paths are allowed when project-only sandboxing is disabled.',
     parameters: {
         type: 'object',
         properties: {
-            path: { type: 'string', description: 'Directory path relative to project root (default: ".")' },
+            path: { type: 'string', description: 'Directory path relative to the current workspace, or an absolute path when allowed (default: ".")' },
             recursive: { type: 'boolean', description: 'List recursively (default: false, max depth 3)' },
         },
         required: [],
@@ -52,7 +52,7 @@ exports.listDirectoryTool = {
         const dirPath = args.path || '.';
         const recursive = args.recursive || false;
         try {
-            const resolved = (0, sandbox_1.resolveSandboxed)(ctx.projectDir, dirPath);
+            const resolved = (0, sandbox_1.resolveSandboxed)(ctx, dirPath);
             // Verify directory exists and is readable
             const stat = await fs.promises.stat(resolved);
             if (!stat.isDirectory()) {
@@ -113,7 +113,10 @@ async function listDir(dir, projectDir, maxDepth, currentDepth) {
             continue;
         }
         const fullPath = path.join(dir, entry.name);
-        const relPath = path.relative(projectDir, fullPath);
+        let relPath = path.relative(projectDir, fullPath);
+        if (relPath.startsWith('..') || path.isAbsolute(relPath)) {
+            relPath = fullPath;
+        }
         if (entry.isDirectory()) {
             results.push(`${indent}${relPath}/`);
             if (currentDepth < maxDepth - 1) {

package/dist/tools/list-directory.js.map

@@ -1 +1 @@
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package/dist/tools/read-file.js

@@ -38,11 +38,11 @@ const fs = __importStar(require("fs"));
 const sandbox_1 = require("./sandbox");
 exports.readFileTool = {
     name: 'read_file',
-    description: 'Read the contents of a file within the project directory.',
+    description: 'Read the contents of a file. Relative paths resolve inside the current workspace; absolute paths are allowed when project-only sandboxing is disabled.',
     parameters: {
         type: 'object',
         properties: {
-            path: { type: 'string', description: 'File path relative to project root' },
+            path: { type: 'string', description: 'File path relative to the current workspace, or an absolute path when allowed' },
             offset: { type: 'number', description: 'Line number to start reading from (1-indexed)' },
             limit: { type: 'number', description: 'Maximum number of lines to read' },
         },
@@ -53,7 +53,7 @@ exports.readFileTool = {
         const offset = args.offset || 1;
         const limit = args.limit;
         try {
-            const resolved = (0, sandbox_1.resolveSandboxed)(ctx.projectDir, filePath);
+            const resolved = (0, sandbox_1.resolveSandboxed)(ctx, filePath);
             await (0, sandbox_1.checkFileSize)(resolved, ctx.maxFileSize);
             const raw = await fs.promises.readFile(resolved, 'utf-8');
             // Normalize line endings: CRLF → LF (Windows compat)

package/dist/tools/read-file.js.map

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