fca-shankar-bot 20.1.0 → 20.2.0

package/.config/npm/node_global/lib/node_modules/npm/node_modules/@npmcli/arborist/lib/arborist/build-ideal-tree.js

@@ -1,1561 +0,0 @@
-// mixin implementing the buildIdealTree method
-const localeCompare = require('@isaacs/string-locale-compare')('en')
-const rpj = require('read-package-json-fast')
-const npa = require('npm-package-arg')
-const pacote = require('pacote')
-const cacache = require('cacache')
-const { callLimit: promiseCallLimit } = require('promise-call-limit')
-const realpath = require('../../lib/realpath.js')
-const { resolve, dirname } = require('node:path')
-const treeCheck = require('../tree-check.js')
-const { readdirScoped } = require('@npmcli/fs')
-const { lstat, readlink } = require('node:fs/promises')
-const { depth } = require('treeverse')
-const { log, time } = require('proc-log')
-const { redact } = require('@npmcli/redact')
-const semver = require('semver')
-
-const {
-  OK,
-  REPLACE,
-  CONFLICT,
-} = require('../can-place-dep.js')
-const PlaceDep = require('../place-dep.js')
-
-const debug = require('../debug.js')
-const fromPath = require('../from-path.js')
-const calcDepFlags = require('../calc-dep-flags.js')
-const Shrinkwrap = require('../shrinkwrap.js')
-const { defaultLockfileVersion } = Shrinkwrap
-const Node = require('../node.js')
-const Link = require('../link.js')
-const addRmPkgDeps = require('../add-rm-pkg-deps.js')
-const optionalSet = require('../optional-set.js')
-const { checkEngine, checkPlatform } = require('npm-install-checks')
-const relpath = require('../relpath.js')
-const resetDepFlags = require('../reset-dep-flags.js')
-
-// note: some of these symbols are shared so we can hit
-// them with unit tests and reuse them across mixins
-const _updateAll = Symbol.for('updateAll')
-const _flagsSuspect = Symbol.for('flagsSuspect')
-const _setWorkspaces = Symbol.for('setWorkspaces')
-const _updateNames = Symbol.for('updateNames')
-const _resolvedAdd = Symbol.for('resolvedAdd')
-const _usePackageLock = Symbol.for('usePackageLock')
-const _rpcache = Symbol.for('realpathCache')
-const _stcache = Symbol.for('statCache')
-
-// used by Reify mixin
-const _addNodeToTrashList = Symbol.for('addNodeToTrashList')
-
-// Push items in, pop them sorted by depth and then path
-// Sorts physically shallower deps up to the front of the queue, because
-// they'll affect things deeper in, then alphabetical for consistency between
-// installs
-class DepsQueue {
-  #deps = []
-  #sorted = true
-
-  get length () {
-    return this.#deps.length
-  }
-
-  push (item) {
-    if (!this.#deps.includes(item)) {
-      this.#sorted = false
-      this.#deps.push(item)
-    }
-  }
-
-  pop () {
-    if (!this.#sorted) {
-      this.#deps.sort((a, b) => (a.depth - b.depth) || localeCompare(a.path, b.path))
-      this.#sorted = true
-    }
-    return this.#deps.shift()
-  }
-}
-
-module.exports = cls => class IdealTreeBuilder extends cls {
-  #complete
-  #currentDep = null
-  #depsQueue = new DepsQueue()
-  #depsSeen = new Set()
-  #explicitRequests = new Set()
-  #follow
-  #installStrategy
-  #linkNodes = new Set()
-  #loadFailures = new Set()
-  #manifests = new Map()
-  #mutateTree = false
-  // a map of each module in a peer set to the thing that depended on
-  // that set of peers in the first place.  Use a WeakMap so that we
-  // don't hold onto references for nodes that are garbage collected.
-  #peerSetSource = new WeakMap()
-  #preferDedupe = false
-  #prune
-  #strictPeerDeps
-  #virtualRoots = new Map()
-
-  constructor (options) {
-    super(options)
-
-    // normalize trailing slash
-    const registry = options.registry || 'https://registry.npmjs.org'
-    options.registry = this.registry = registry.replace(/\/+$/, '') + '/'
-
-    const {
-      follow = false,
-      installStrategy = 'hoisted',
-      idealTree = null,
-      installLinks = false,
-      legacyPeerDeps = false,
-      packageLock = true,
-      strictPeerDeps = false,
-      workspaces,
-      global,
-    } = options
-
-    this.#strictPeerDeps = !!strictPeerDeps
-
-    this.idealTree = idealTree
-    this.installLinks = installLinks
-    this.legacyPeerDeps = legacyPeerDeps
-
-    this[_usePackageLock] = packageLock
-    this.#installStrategy = global ? 'shallow' : installStrategy
-    this.#follow = !!follow
-
-    if (workspaces?.length && global) {
-      throw new Error('Cannot operate on workspaces in global mode')
-    }
-
-    this[_updateAll] = false
-    this[_updateNames] = []
-    this[_resolvedAdd] = []
-  }
-
-  get explicitRequests () {
-    return new Set(this.#explicitRequests)
-  }
-
-  // public method
-  async buildIdealTree (options = {}) {
-    if (this.idealTree) {
-      return this.idealTree
-    }
-
-    // allow the user to set reify options on the ctor as well.
-    // XXX: deprecate separate reify() options object.
-    options = { ...this.options, ...options }
-
-    // an empty array or any falsey value is the same as null
-    if (!options.add || options.add.length === 0) {
-      options.add = null
-    }
-    if (!options.rm || options.rm.length === 0) {
-      options.rm = null
-    }
-
-    const timeEnd = time.start('idealTree')
-
-    if (!options.add && !options.rm && !options.update && this.options.global) {
-      throw new Error('global requires add, rm, or update option')
-    }
-
-    // first get the virtual tree, if possible.  If there's a lockfile, then
-    // that defines the ideal tree, unless the root package.json is not
-    // satisfied by what the ideal tree provides.
-    // from there, we start adding nodes to it to satisfy the deps requested
-    // by the package.json in the root.
-
-    this.#parseSettings(options)
-
-    // start tracker block
-    this.addTracker('idealTree')
-
-    try {
-      await this.#initTree()
-      await this.#inflateAncientLockfile()
-      await this.#applyUserRequests(options)
-      await this.#buildDeps()
-      await this.#fixDepFlags()
-      await this.#pruneFailedOptional()
-      await this.#checkEngineAndPlatform()
-    } finally {
-      timeEnd()
-      this.finishTracker('idealTree')
-    }
-
-    return treeCheck(this.idealTree)
-  }
-
-  async #checkEngineAndPlatform () {
-    const { engineStrict, npmVersion, nodeVersion } = this.options
-    for (const node of this.idealTree.inventory.values()) {
-      if (!node.optional) {
-        try {
-          // if devEngines is present in the root node we ignore the engines check
-          if (!(node.isRoot && node.package.devEngines)) {
-            checkEngine(node.package, npmVersion, nodeVersion, this.options.force)
-          }
-        } catch (err) {
-          if (engineStrict) {
-            throw err
-          }
-          log.warn(err.code, err.message, {
-            package: err.pkgid,
-            required: err.required,
-            current: err.current,
-          })
-        }
-        checkPlatform(node.package, this.options.force)
-      }
-    }
-  }
-
-  #parseSettings (options) {
-    const update = options.update === true ? { all: true }
-      : Array.isArray(options.update) ? { names: options.update }
-      : options.update || {}
-
-    if (update.all || !Array.isArray(update.names)) {
-      update.names = []
-    }
-
-    this.#complete = !!options.complete
-    this.#preferDedupe = !!options.preferDedupe
-
-    // validates list of update names, they must
-    // be dep names only, no semver ranges are supported
-    for (const name of update.names) {
-      const spec = npa(name)
-      const validationError =
-        new TypeError(`Update arguments must only contain package names, eg:
-    npm update ${spec.name}`)
-      validationError.code = 'EUPDATEARGS'
-
-      // If they gave us anything other than a bare package name
-      if (spec.raw !== spec.name) {
-        throw validationError
-      }
-    }
-    this[_updateNames] = update.names
-
-    this[_updateAll] = update.all
-    // we prune by default unless explicitly set to boolean false
-    this.#prune = options.prune !== false
-
-    // set if we add anything, but also set here if we know we'll make
-    // changes and thus have to maybe prune later.
-    this.#mutateTree = !!(
-      options.add ||
-      options.rm ||
-      update.all ||
-      update.names.length
-    )
-  }
-
-  // load the initial tree, either the virtualTree from a shrinkwrap,
-  // or just the root node from a package.json
-  async #initTree () {
-    const timeEnd = time.start('idealTree:init')
-    let root
-    if (this.options.global) {
-      root = await this.#globalRootNode()
-    } else {
-      try {
-        const pkg = await rpj(this.path + '/package.json')
-        root = await this.#rootNodeFromPackage(pkg)
-      } catch (err) {
-        if (err.code === 'EJSONPARSE') {
-          throw err
-        }
-        root = await this.#rootNodeFromPackage({})
-      }
-    }
-    return this[_setWorkspaces](root)
-      // ok to not have a virtual tree.  probably initial install.
-      // When updating all, we load the shrinkwrap, but don't bother
-      // to build out the full virtual tree from it, since we'll be
-      // reconstructing it anyway.
-      .then(root => {
-        if (this.options.global) {
-          return root
-        } else if (!this[_usePackageLock] || this[_updateAll]) {
-          return Shrinkwrap.reset({
-            path: this.path,
-            lockfileVersion: this.options.lockfileVersion,
-            resolveOptions: this.options,
-          }).then(meta => Object.assign(root, { meta }))
-        } else {
-          return this.loadVirtual({ root })
-            .then(tree => {
-              this.#applyRootOverridesToWorkspaces(tree)
-              return tree
-            })
-        }
-      })
-
-      // if we don't have a lockfile to go from, then start with the
-      // actual tree, so we only make the minimum required changes.
-      // don't do this for global installs or updates, because in those
-      // cases we don't use a lockfile anyway.
-      // Load on a new Arborist object, so the Nodes aren't the same,
-      // or else it'll get super confusing when we change them!
-      .then(async root => {
-        if ((!this[_updateAll] && !this.options.global && !root.meta.loadedFromDisk) || (this.options.global && this[_updateNames].length)) {
-          await new this.constructor(this.options).loadActual({ root })
-          const tree = root.target
-          // even though we didn't load it from a package-lock.json FILE,
-          // we still loaded it "from disk", meaning we have to reset
-          // dep flags before assuming that any mutations were reflected.
-          if (tree.children.size) {
-            root.meta.loadedFromDisk = true
-            // set these so that we don't try to ancient lockfile reload it
-            root.meta.originalLockfileVersion = root.meta.lockfileVersion = this.options.lockfileVersion || defaultLockfileVersion
-          }
-        }
-        root.meta.inferFormattingOptions(root.package)
-        return root
-      })
-
-      .then(tree => {
-        // search the virtual tree for invalid edges, if any are found add their source to
-        // the depsQueue so that we'll fix it later
-        depth({
-          tree,
-          getChildren: (node) => {
-            const children = []
-            for (const edge of node.edgesOut.values()) {
-              children.push(edge.to)
-            }
-            return children
-          },
-          filter: node => node,
-          visit: node => {
-            for (const edge of node.edgesOut.values()) {
-              if (!edge.valid) {
-                this.#depsQueue.push(node)
-                break // no need to continue the loop after the first hit
-              }
-            }
-          },
-        })
-        // null the virtual tree, because we're about to hack away at it
-        // if you want another one, load another copy.
-        this.idealTree = tree
-        this.virtualTree = null
-        timeEnd()
-        return tree
-      })
-  }
-
-  async #globalRootNode () {
-    const root = await this.#rootNodeFromPackage({ dependencies: {} })
-    // this is a gross kludge to handle the fact that we don't save
-    // metadata on the root node in global installs, because the "root"
-    // node is something like /usr/local/lib.
-    const meta = new Shrinkwrap({
-      path: this.path,
-      lockfileVersion: this.options.lockfileVersion,
-      resolveOptions: this.options,
-    })
-    meta.reset()
-    root.meta = meta
-    return root
-  }
-
-  async #rootNodeFromPackage (pkg) {
-    // if the path doesn't exist, then we explode at this point. Note that
-    // this is not a problem for reify(), since it creates the root path
-    // before ever loading trees.
-    // TODO: make buildIdealTree() and loadActual handle a missing root path,
-    // or a symlink to a missing target, and let reify() create it as needed.
-    const real = await realpath(this.path, this[_rpcache], this[_stcache])
-    const Cls = real === this.path ? Node : Link
-    const root = new Cls({
-      path: this.path,
-      realpath: real,
-      pkg,
-      extraneous: false,
-      dev: false,
-      devOptional: false,
-      peer: false,
-      optional: false,
-      global: this.options.global,
-      installLinks: this.installLinks,
-      legacyPeerDeps: this.legacyPeerDeps,
-      loadOverrides: true,
-    })
-    if (root.isLink) {
-      root.target = new Node({
-        path: real,
-        realpath: real,
-        pkg,
-        extraneous: false,
-        dev: false,
-        devOptional: false,
-        peer: false,
-        optional: false,
-        global: this.options.global,
-        installLinks: this.installLinks,
-        legacyPeerDeps: this.legacyPeerDeps,
-        root,
-      })
-    }
-    return root
-  }
-
-  // process the add/rm requests by modifying the root node, and the
-  // update.names request by queueing nodes dependent on those named.
-  async #applyUserRequests (options) {
-    const timeEnd = time.start('idealTree:userRequests')
-    const tree = this.idealTree.target
-
-    if (!this.options.workspaces.length) {
-      await this.#applyUserRequestsToNode(tree, options)
-    } else {
-      const nodes = this.workspaceNodes(tree, this.options.workspaces)
-      if (this.options.includeWorkspaceRoot) {
-        nodes.push(tree)
-      }
-      const appliedRequests = nodes.map(
-        node => this.#applyUserRequestsToNode(node, options)
-      )
-      await Promise.all(appliedRequests)
-    }
-
-    timeEnd()
-  }
-
-  async #applyUserRequestsToNode (tree, options) {
-    // If we have a list of package names to update, and we know it's
-    // going to update them wherever they are, add any paths into those
-    // named nodes to the buildIdealTree queue.
-    if (!this.options.global && this[_updateNames].length) {
-      this.#queueNamedUpdates()
-    }
-
-    // global updates only update the globalTop nodes, but we need to know
-    // that they're there, and not reinstall the world unnecessarily.
-    const globalExplicitUpdateNames = []
-    if (this.options.global && (this[_updateAll] || this[_updateNames].length)) {
-      const nm = resolve(this.path, 'node_modules')
-      const paths = await readdirScoped(nm).catch(() => [])
-      for (const p of paths) {
-        const name = p.replace(/\\/g, '/')
-        tree.package.dependencies = tree.package.dependencies || {}
-        const updateName = this[_updateNames].includes(name)
-        if (this[_updateAll] || updateName) {
-          if (updateName) {
-            globalExplicitUpdateNames.push(name)
-          }
-          const dir = resolve(nm, name)
-          const st = await lstat(dir)
-            .catch(/* istanbul ignore next */ () => null)
-          if (st && st.isSymbolicLink()) {
-            const target = await readlink(dir)
-            const real = resolve(dirname(dir), target)
-            tree.package.dependencies[name] = `file:${real}`
-          } else {
-            tree.package.dependencies[name] = '*'
-          }
-        }
-      }
-    }
-
-    if (this.auditReport && this.auditReport.size > 0) {
-      await this.#queueVulnDependents(options)
-    }
-
-    const { add, rm } = options
-
-    if (rm && rm.length) {
-      addRmPkgDeps.rm(tree.package, rm)
-      for (const name of rm) {
-        this.#explicitRequests.add({ from: tree, name, action: 'DELETE' })
-      }
-    }
-
-    if (add && add.length) {
-      await this.#add(tree, options)
-    }
-
-    // triggers a refresh of all edgesOut.  this has to be done BEFORE
-    // adding the edges to explicitRequests, because the package setter
-    // resets all edgesOut.
-    if (add && add.length || rm && rm.length || this.options.global) {
-      tree.package = tree.package
-    }
-
-    for (const spec of this[_resolvedAdd]) {
-      if (spec.tree === tree) {
-        this.#explicitRequests.add(tree.edgesOut.get(spec.name))
-      }
-    }
-    for (const name of globalExplicitUpdateNames) {
-      this.#explicitRequests.add(tree.edgesOut.get(name))
-    }
-
-    this.#depsQueue.push(tree)
-  }
-
-  // This returns a promise because we might not have the name yet, and need to
-  // call pacote.manifest to find the name.
-  async #add (tree, { add, saveType = null, saveBundle = false }) {
-    // If we have a link it will need to be added relative to the target's path
-    const path = tree.target.path
-
-    // get the name for each of the specs in the list.
-    // ie, doing `foo@bar` we just return foo but if it's a url or git, we
-    // don't know the name until we fetch it and look in its manifest.
-    await Promise.all(add.map(async rawSpec => {
-      // We do NOT provide the path to npa here, because user-additions need to
-      // be resolved relative to the tree being added to.
-      let spec = npa(rawSpec)
-
-      // if it's just @'' then we reload whatever's there, or get latest
-      // if it's an explicit tag, we need to install that specific tag version
-      const isTag = spec.rawSpec && spec.type === 'tag'
-
-      // look up the names of file/directory/git specs
-      if (!spec.name || isTag) {
-        const mani = await pacote.manifest(spec, { ...this.options })
-        if (isTag) {
-          // translate tag to a version
-          spec = npa(`${mani.name}@${mani.version}`)
-        }
-        spec.name = mani.name
-      }
-
-      const { name } = spec
-      if (spec.type === 'file') {
-        spec = npa(`file:${relpath(path, spec.fetchSpec)}`, path)
-        spec.name = name
-      } else if (spec.type === 'directory') {
-        try {
-          const real = await realpath(spec.fetchSpec, this[_rpcache], this[_stcache])
-          spec = npa(`file:${relpath(path, real)}`, path)
-          spec.name = name
-        } catch {
-          // TODO: create synthetic test case to simulate realpath failure
-        }
-      }
-      spec.tree = tree
-      this[_resolvedAdd].push(spec)
-    }))
-
-    // now this._resolvedAdd is a list of spec objects with names.
-    // find a home for each of them!
-    addRmPkgDeps.add({
-      pkg: tree.package,
-      add: this[_resolvedAdd],
-      saveBundle,
-      saveType,
-    })
-  }
-
-  // TODO: provide a way to fix bundled deps by exposing metadata about
-  // what's in the bundle at each published manifest.  Without that, we
-  // can't possibly fix bundled deps without breaking a ton of other stuff,
-  // and leaving the user subject to getting it overwritten later anyway.
-  async #queueVulnDependents (options) {
-    for (const vuln of this.auditReport.values()) {
-      for (const node of vuln.nodes) {
-        const bundler = node.getBundler()
-
-        // XXX this belongs in the audit report itself, not here.
-        // We shouldn't even get these things here, and they shouldn't
-        // be printed by npm-audit-report as if they can be fixed, because
-        // they can't.
-        if (bundler) {
-          log.warn(`audit fix ${node.name}@${node.version}`,
-            `${node.location}\nis a bundled dependency of\n${
-            bundler.name}@${bundler.version} at ${bundler.location}\n` +
-            'It cannot be fixed automatically.\n' +
-            `Check for updates to the ${bundler.name} package.`)
-          continue
-        }
-
-        for (const edge of node.edgesIn) {
-          this.addTracker('idealTree', edge.from.name, edge.from.location)
-          this.#depsQueue.push(edge.from)
-        }
-      }
-    }
-
-    // note any that can't be fixed at the root level without --force
-    // if there's a fix, we use that.  otherwise, the user has to remove it,
-    // find a different thing, fix the upstream, etc.
-    //
-    // XXX: how to handle top nodes that aren't the root?  Maybe the report
-    // just tells the user to cd into that directory and fix it?
-    if (this.options.force && this.auditReport && this.auditReport.topVulns.size) {
-      options.add = options.add || []
-      options.rm = options.rm || []
-      const nodesTouched = new Set()
-      for (const [name, topVuln] of this.auditReport.topVulns.entries()) {
-        const {
-          simpleRange,
-          topNodes,
-          fixAvailable,
-        } = topVuln
-        for (const node of topNodes) {
-          if (!node.isProjectRoot && !node.isWorkspace) {
-            // not something we're going to fix, sorry.  have to cd into
-            // that directory and fix it yourself.
-            log.warn('audit', 'Manual fix required in linked project ' +
-              `at ./${node.location} for ${name}@${simpleRange}.\n` +
-              `'cd ./${node.location}' and run 'npm audit' for details.`)
-            continue
-          }
-
-          if (!fixAvailable) {
-            log.warn('audit', `No fix available for ${name}@${simpleRange}`)
-            continue
-          }
-
-          // name may be different if parent fixes the dep
-          // see Vuln fixAvailable setter
-          const { isSemVerMajor, version, name: fixName } = fixAvailable
-          const breakingMessage = isSemVerMajor
-            ? 'a SemVer major change'
-            : 'outside your stated dependency range'
-          log.warn('audit', `Updating ${fixName} to ${version}, ` +
-            `which is ${breakingMessage}.`)
-
-          await this.#add(node, { add: [`${fixName}@${version}`] })
-          nodesTouched.add(node)
-        }
-      }
-      for (const node of nodesTouched) {
-        node.package = node.package
-      }
-    }
-  }
-
-  #avoidRange (name) {
-    if (!this.auditReport) {
-      return null
-    }
-    const vuln = this.auditReport.get(name)
-    if (!vuln) {
-      return null
-    }
-    return vuln.range
-  }
-
-  #queueNamedUpdates () {
-    // ignore top nodes, since they are not loaded the same way, and
-    // probably have their own project associated with them.
-
-    // for every node with one of the names on the list, we add its
-    // dependents to the queue to be evaluated.  in buildDepStep,
-    // anything on the update names list will get refreshed, even if
-    // it isn't a problem.
-
-    // XXX this could be faster by doing a series of inventory.query('name')
-    // calls rather than walking over everything in the tree.
-    for (const node of this.idealTree.inventory.values()) {
-      // XXX add any invalid edgesOut to the queue
-      if (this[_updateNames].includes(node.name) &&
-        !node.isTop && !node.inDepBundle && !node.inShrinkwrap) {
-        for (const edge of node.edgesIn) {
-          this.addTracker('idealTree', edge.from.name, edge.from.location)
-          this.#depsQueue.push(edge.from)
-        }
-      }
-    }
-  }
-
-  async #inflateAncientLockfile () {
-    const { meta, inventory } = this.idealTree
-    const ancient = meta.ancientLockfile
-    const old = meta.loadedFromDisk && !(meta.originalLockfileVersion >= 2)
-
-    if (inventory.size === 0 || !ancient && !old) {
-      return
-    }
-
-    // if the lockfile is from node v5 or earlier, then we'll have to reload
-    // all the manifests of everything we encounter.  this is costly, but at
-    // least it's just a one-time hit.
-    const timeEnd = time.start('idealTree:inflate')
-
-    // don't warn if we're not gonna actually write it back anyway.
-    const heading = ancient ? 'ancient lockfile' : 'old lockfile'
-    if (ancient || !this.options.lockfileVersion ||
-        this.options.lockfileVersion >= defaultLockfileVersion) {
-      log.warn(heading,
-        `
-The ${meta.type} file was created with an old version of npm,
-so supplemental metadata must be fetched from the registry.
-
-This is a one-time fix-up, please be patient...
-`)
-    }
-
-    this.addTracker('idealTree:inflate')
-    const queue = []
-    for (const node of inventory.values()) {
-      if (node.isProjectRoot) {
-        continue
-      }
-
-      // if the node's location isn't within node_modules then this is actually
-      // a link target, so skip it. the link node itself will be queued later.
-      if (!node.location.startsWith('node_modules')) {
-        continue
-      }
-
-      queue.push(async () => {
-        log.silly('inflate', node.location)
-        const { resolved, version, path, name, location, integrity } = node
-        // don't try to hit the registry for linked deps
-        const useResolved = resolved && (
-          !version || resolved.startsWith('file:')
-        )
-        const id = useResolved ? resolved : version
-        const spec = npa.resolve(name, id, dirname(path))
-        const t = `idealTree:inflate:${location}`
-        this.addTracker(t)
-        try {
-          const mani = await pacote.manifest(spec, {
-            ...this.options,
-            resolved: resolved,
-            integrity: integrity,
-            fullMetadata: false,
-          })
-          node.package = { ...mani, _id: `${mani.name}@${mani.version}` }
-        } catch (er) {
-          const warning = `Could not fetch metadata for ${name}@${id}`
-          log.warn(heading, warning, er)
-        }
-        this.finishTracker(t)
-      })
-    }
-    await promiseCallLimit(queue)
-
-    // have to re-calc dep flags, because the nodes don't have edges
-    // until their packages get assigned, so everything looks extraneous
-    calcDepFlags(this.idealTree)
-
-    // yes, yes, this isn't the "original" version, but now that it's been
-    // upgraded, we need to make sure we don't do the work to upgrade it
-    // again, since it's now as new as can be.
-    if (!this.options.lockfileVersion && !meta.hiddenLockfile) {
-      meta.originalLockfileVersion = defaultLockfileVersion
-    }
-    this.finishTracker('idealTree:inflate')
-    timeEnd()
-  }
-
-  // at this point we have a virtual tree with the actual root node's
-  // package deps, which may be partly or entirely incomplete, invalid
-  // or extraneous.
-  #buildDeps () {
-    const timeEnd = time.start('idealTree:buildDeps')
-    const tree = this.idealTree.target
-    tree.assertRootOverrides()
-    this.#depsQueue.push(tree)
-    // XXX also push anything that depends on a node with a name
-    // in the override list
-    log.silly('idealTree', 'buildDeps')
-    this.addTracker('idealTree', tree.name, '')
-    return this.#buildDepStep().then(timeEnd)
-  }
-
-  async #buildDepStep () {
-    // removes tracker of previous dependency in the queue
-    if (this.#currentDep) {
-      const { location, name } = this.#currentDep
-      time.end(`idealTree:${location || '#root'}`)
-      this.finishTracker('idealTree', name, location)
-      this.#currentDep = null
-    }
-
-    if (!this.#depsQueue.length) {
-      return this.#resolveLinks()
-    }
-
-    const node = this.#depsQueue.pop()
-    const bd = node.package.bundleDependencies
-    const hasBundle = bd && Array.isArray(bd) && bd.length
-    const { hasShrinkwrap } = node
-
-    // if the node was already visited, or has since been removed from the
-    // tree, skip over it and process the rest of the queue.  If a node has
-    // a shrinkwrap, also skip it, because it's going to get its deps
-    // satisfied by whatever's in that file anyway.
-    if (this.#depsSeen.has(node) ||
-        node.root !== this.idealTree ||
-        hasShrinkwrap && !this.#complete) {
-      return this.#buildDepStep()
-    }
-
-    this.#depsSeen.add(node)
-    this.#currentDep = node
-    time.start(`idealTree:${node.location || '#root'}`)
-
-    // if we're loading a _complete_ ideal tree, for a --package-lock-only
-    // installation for example, we have to crack open the tarball and
-    // look inside if it has bundle deps or shrinkwraps.  note that this is
-    // not necessary during a reification, because we just update the
-    // ideal tree by reading bundles/shrinkwraps in place.
-    // Don't bother if the node is from the actual tree and hasn't
-    // been resolved, because we can't fetch it anyway, could be anything!
-    const crackOpen = this.#complete &&
-      node !== this.idealTree &&
-      node.resolved &&
-      (hasBundle || hasShrinkwrap) &&
-      !node.ideallyInert
-    if (crackOpen) {
-      const Arborist = this.constructor
-      const opt = { ...this.options }
-      await cacache.tmp.withTmp(this.cache, opt, async path => {
-        await pacote.extract(node.resolved, path, {
-          ...opt,
-          Arborist,
-          resolved: node.resolved,
-          integrity: node.integrity,
-        })
-
-        if (hasShrinkwrap) {
-          await new Arborist({ ...this.options, path })
-            .loadVirtual({ root: node })
-        }
-
-        if (hasBundle) {
-          await new Arborist({ ...this.options, path })
-            .loadActual({ root: node, ignoreMissing: true })
-        }
-      })
-    }
-
-    // if any deps are missing or invalid, then we fetch the manifest for
-    // the thing we want, and build a new dep node from that.
-    // Then, find the ideal placement for that node.  The ideal placement
-    // searches from the node's deps (or parent deps in the case of non-root
-    // peer deps), and walks up the tree until it finds the highest spot
-    // where it doesn't cause any conflicts.
-    //
-    // A conflict can be:
-    // - A node by that name already exists at that location.
-    // - The parent has a peer dep on that name
-    // - One of the node's peer deps conflicts at that location, unless the
-    //   peer dep is met by a node at that location, which is fine.
-    //
-    // If we create a new node, then build its ideal deps as well.
-    //
-    // Note: this is the same "maximally naive" deduping tree-building
-    // algorithm that npm has used since v3.  In a case like this:
-    //
-    // root -> (a@1, b@1||2)
-    // a -> (b@1)
-    //
-    // You'll end up with a tree like this:
-    //
-    // root
-    // +-- a@1
-    // |   +-- b@1
-    // +-- b@2
-    //
-    // rather than this, more deduped, but just as correct tree:
-    //
-    // root
-    // +-- a@1
-    // +-- b@1
-    //
-    // Another way to look at it is that this algorithm favors getting higher
-    // version deps at higher levels in the tree, even if that reduces
-    // potential deduplication.
-    //
-    // Set `preferDedupe: true` in the options to replace the shallower
-    // dep if allowed.
-
-    const tasks = []
-    const peerSource = this.#peerSetSource.get(node) || node
-    for (const edge of this.#problemEdges(node)) {
-      if (edge.peerConflicted) {
-        continue
-      }
-
-      // peerSetSource is only relevant when we have a peerEntryEdge
-      // otherwise we're setting regular non-peer deps as if they have
-      // a virtual root of whatever brought in THIS node.
-      // so we VR the node itself if the edge is not a peer
-      const source = edge.peer ? peerSource : node
-
-      const virtualRoot = this.#virtualRoot(source, true)
-      // reuse virtual root if we already have one, but don't
-      // try to do the override ahead of time, since we MAY be able
-      // to create a more correct tree than the virtual root could.
-      const vrEdge = virtualRoot && virtualRoot.edgesOut.get(edge.name)
-      const vrDep = vrEdge && vrEdge.valid && vrEdge.to
-      // only re-use the virtualRoot if it's a peer edge we're placing.
-      // otherwise, we end up in situations where we override peer deps that
-      // we could have otherwise found homes for.  Eg:
-      // xy -> (x, y)
-      // x -> PEER(z@1)
-      // y -> PEER(z@2)
-      // If xy is a dependency, we can resolve this like:
-      // project
-      // +-- xy
-      // |   +-- y
-      // |   +-- z@2
-      // +-- x
-      // +-- z@1
-      // But if x and y are loaded in the same virtual root, then they will
-      // be forced to agree on a version of z.
-      const required = new Set([edge.from])
-      const parent = edge.peer ? virtualRoot : null
-      const dep = vrDep && vrDep.satisfies(edge) ? vrDep
-        : await this.#nodeFromEdge(edge, parent, null, required)
-
-      /* istanbul ignore next */
-      debug(() => {
-        if (!dep) {
-          throw new Error('no dep??')
-        }
-      })
-
-      tasks.push({ edge, dep })
-    }
-
-    const placeDeps = tasks.sort((a, b) => localeCompare(a.edge.name, b.edge.name))
-
-    const promises = []
-    for (const { edge, dep } of placeDeps) {
-      const pd = new PlaceDep({
-        edge,
-        dep,
-
-        auditReport: this.auditReport,
-        explicitRequest: this.#explicitRequests.has(edge),
-        force: this.options.force,
-        installLinks: this.installLinks,
-        installStrategy: this.#installStrategy,
-        legacyPeerDeps: this.legacyPeerDeps,
-        preferDedupe: this.#preferDedupe,
-        strictPeerDeps: this.#strictPeerDeps,
-        updateNames: this[_updateNames],
-      })
-      // placing a dep is actually a tree of placing the dep itself
-      // and all of its peer group that aren't already met by the tree
-      depth({
-        tree: pd,
-        getChildren: pd => pd.children,
-        visit: pd => {
-          const { placed, edge, canPlace: cpd } = pd
-          // if we didn't place anything, nothing to do here
-          if (!placed) {
-            return
-          }
-
-          // we placed something, that means we changed the tree
-          if (placed.errors.length) {
-            this.#loadFailures.add(placed)
-          }
-          this.#mutateTree = true
-          if (cpd.canPlaceSelf === OK) {
-            for (const edgeIn of placed.edgesIn) {
-              if (edgeIn === edge) {
-                continue
-              }
-              const { from, valid, peerConflicted } = edgeIn
-              if (!peerConflicted && !valid && !this.#depsSeen.has(from)) {
-                this.addTracker('idealTree', from.name, from.location)
-                this.#depsQueue.push(edgeIn.from)
-              }
-            }
-          } else {
-            /* istanbul ignore else - should be only OK or REPLACE here */
-            if (cpd.canPlaceSelf === REPLACE) {
-              // this may also create some invalid edges, for example if we're
-              // intentionally causing something to get nested which was
-              // previously placed in this location.
-              for (const edgeIn of placed.edgesIn) {
-                if (edgeIn === edge) {
-                  continue
-                }
-
-                const { valid, peerConflicted } = edgeIn
-                if (!valid && !peerConflicted) {
-                  // if it's already been visited, we have to re-visit
-                  // otherwise, just enqueue normally.
-                  this.#depsSeen.delete(edgeIn.from)
-                  this.#depsQueue.push(edgeIn.from)
-                }
-              }
-            }
-          }
-
-          /* istanbul ignore if - should be impossible */
-          if (cpd.canPlaceSelf === CONFLICT) {
-            debug(() => {
-              const er = new Error('placed with canPlaceSelf=CONFLICT')
-              throw Object.assign(er, { placeDep: pd })
-            })
-            return
-          }
-
-          // lastly, also check for the missing deps of the node we placed,
-          // and any holes created by pruning out conflicted peer sets.
-          this.#depsQueue.push(placed)
-          for (const dep of pd.needEvaluation) {
-            this.#depsSeen.delete(dep)
-            this.#depsQueue.push(dep)
-          }
-
-          // pre-fetch any problem edges, since we'll need these soon
-          // if it fails at this point, though, dont' worry because it
-          // may well be an optional dep that has gone missing.  it'll
-          // fail later anyway.
-          for (const e of this.#problemEdges(placed)) {
-            // XXX This is somehow load bearing.  This makes tests that print
-            // the ideal tree of a tree with tarball dependencies fail. This
-            // can't be changed or removed till we figure out why
-            // The test is named "tarball deps with transitive tarball deps"
-            promises.push(() =>
-              this.#fetchManifest(npa.resolve(e.name, e.spec, fromPath(placed, e)))
-                .catch(() => null)
-            )
-          }
-        },
-      })
-    }
-
-    for (const { to } of node.edgesOut.values()) {
-      if (to && to.isLink && to.target) {
-        this.#linkNodes.add(to)
-      }
-    }
-
-    await promiseCallLimit(promises)
-    return this.#buildDepStep()
-  }
-
-  // loads a node from an edge, and then loads its peer deps (and their
-  // peer deps, on down the line) into a virtual root parent.
-  async #nodeFromEdge (edge, parent_, secondEdge, required) {
-    // create a virtual root node with the same deps as the node that
-    // is requesting this one, so that we can get all the peer deps in
-    // a context where they're likely to be resolvable.
-    // Note that the virtual root will also have virtual copies of the
-    // targets of any child Links, so that they resolve appropriately.
-    const parent = parent_ || this.#virtualRoot(edge.from)
-
-    const spec = npa.resolve(edge.name, edge.spec, edge.from.path)
-    const first = await this.#nodeFromSpec(edge.name, spec, parent, edge)
-
-    // we might have a case where the parent has a peer dependency on
-    // `foo@*` which resolves to v2, but another dep in the set has a
-    // peerDependency on `foo@1`.  In that case, if we force it to be v2,
-    // we're unnecessarily triggering an ERESOLVE.
-    // If we have a second edge to worry about, and it's not satisfied
-    // by the first node, try a second and see if that satisfies the
-    // original edge here.
-    const spec2 = secondEdge && npa.resolve(
-      edge.name,
-      secondEdge.spec,
-      secondEdge.from.path
-    )
-    const second = secondEdge && !secondEdge.valid
-      ? await this.#nodeFromSpec(edge.name, spec2, parent, secondEdge)
-      : null
-
-    // pick the second one if they're both happy with that, otherwise first
-    const node = second && edge.valid ? second : first
-    // ensure the one we want is the one that's placed
-    node.parent = parent
-
-    if (required.has(edge.from) && edge.type !== 'peerOptional' ||
-        secondEdge && (
-          required.has(secondEdge.from) && secondEdge.type !== 'peerOptional')) {
-      required.add(node)
-    }
-
-    // keep track of the thing that caused this node to be included.
-    const src = parent.sourceReference
-    this.#peerSetSource.set(node, src)
-
-    // do not load the peers along with the set if this is a global top pkg
-    // otherwise we'll be tempted to put peers as other top-level installed
-    // things, potentially clobbering what's there already, which is not
-    // what we want.  the missing edges will be picked up on the next pass.
-    if (this.options.global && edge.from.isProjectRoot) {
-      return node
-    }
-
-    // otherwise, we have to make sure that our peers can go along with us.
-    return this.#loadPeerSet(node, required)
-  }
-
-  #virtualRoot (node, reuse = false) {
-    if (reuse && this.#virtualRoots.has(node)) {
-      return this.#virtualRoots.get(node)
-    }
-
-    const vr = new Node({
-      path: node.realpath,
-      sourceReference: node,
-      installLinks: this.installLinks,
-      legacyPeerDeps: this.legacyPeerDeps,
-      overrides: node.overrides,
-    })
-
-    // also need to set up any targets from any link deps, so that
-    // they are properly reflected in the virtual environment
-    for (const child of node.children.values()) {
-      if (child.isLink) {
-        new Node({
-          path: child.realpath,
-          sourceReference: child.target,
-          root: vr,
-        })
-      }
-    }
-
-    this.#virtualRoots.set(node, vr)
-    return vr
-  }
-
-  #problemEdges (node) {
-    // skip over any bundled deps, they're not our problem.
-    // Note that this WILL fetch bundled meta-deps which are also dependencies
-    // but not listed as bundled deps.  When reifying, we first unpack any
-    // nodes that have bundleDependencies, then do a loadActual on them, move
-    // the nodes into the ideal tree, and then prune.  So, fetching those
-    // possibly-bundled meta-deps at this point doesn't cause any worse
-    // problems than a few unnecessary packument fetches.
-
-    // also skip over any nodes in the tree that failed to load, since those
-    // will crash the install later on anyway.
-    const bd = node.isProjectRoot || node.isWorkspace ? null
-      : node.package.bundleDependencies
-    const bundled = new Set(bd || [])
-
-    const problems = []
-    for (const edge of node.edgesOut.values()) {
-      // If it's included in a bundle, we take whatever is specified.
-      if (bundled.has(edge.name)) {
-        continue
-      }
-
-      // If it's already been logged as a load failure, skip it.
-      if (edge.to && this.#loadFailures.has(edge.to)) {
-        continue
-      }
-
-      // If it's shrinkwrapped, we use what the shrinkwap wants.
-      if (edge.to && edge.to.inShrinkwrap) {
-        continue
-      }
-
-      // If the edge has no destination, that's a problem, unless
-      // if it's peerOptional and not explicitly requested.
-      if (!edge.to) {
-        if (edge.type !== 'peerOptional' ||
-          this.#explicitRequests.has(edge)) {
-          problems.push(edge)
-        }
-        continue
-      }
-
-      // If the edge has an error, there's a problem.
-      if (!edge.valid) {
-        problems.push(edge)
-        continue
-      }
-
-      // If the edge is a workspace, and it's valid, leave it alone
-      if (edge.to.isWorkspace) {
-        continue
-      }
-
-      // user explicitly asked to update this package by name, problem
-      if (this[_updateNames].includes(edge.name)) {
-        problems.push(edge)
-        continue
-      }
-
-      // fixing a security vulnerability with this package, problem
-      if (this.auditReport && this.auditReport.isVulnerable(edge.to)) {
-        problems.push(edge)
-        continue
-      }
-
-      // user has explicitly asked to install this package, problem
-      if (this.#explicitRequests.has(edge)) {
-        problems.push(edge)
-        continue
-      }
-    }
-    return problems
-  }
-
-  async #fetchManifest (spec) {
-    const options = {
-      ...this.options,
-      avoid: this.#avoidRange(spec.name),
-      fullMetadata: true,
-    }
-    // get the intended spec and stored metadata from yarn.lock file,
-    // if available and valid.
-    spec = this.idealTree.meta.checkYarnLock(spec, options)
-
-    if (this.#manifests.has(spec.raw)) {
-      return this.#manifests.get(spec.raw)
-    } else {
-      log.silly('fetch manifest', spec.raw.replace(spec.rawSpec, redact(spec.rawSpec)))
-      const mani = await pacote.manifest(spec, options)
-      this.#manifests.set(spec.raw, mani)
-      return mani
-    }
-  }
-
-  #nodeFromSpec (name, spec, parent, edge) {
-    // pacote will slap integrity on its options, so we have to clone
-    // the object so it doesn't get mutated.
-    // Don't bother to load the manifest for link deps, because the target
-    // might be within another package that doesn't exist yet.
-    const { installLinks, legacyPeerDeps } = this
-    const isWorkspace = this.idealTree.workspaces && this.idealTree.workspaces.has(spec.name)
-
-    // spec is a directory, link it unless installLinks is set or it's a workspace
-    // TODO post arborist refactor, will need to check for installStrategy=linked
-    if (spec.type === 'directory' && (isWorkspace || !installLinks)) {
-      return this.#linkFromSpec(name, spec, parent, edge)
-    }
-
-    // if the spec matches a workspace name, then see if the workspace node will
-    // satisfy the edge. if it does, we return the workspace node to make sure it
-    // takes priority.
-    if (isWorkspace) {
-      const existingNode = this.idealTree.edgesOut.get(spec.name).to
-      if (existingNode && existingNode.isWorkspace && existingNode.satisfies(edge)) {
-        return existingNode
-      }
-    }
-
-    // spec isn't a directory, and either isn't a workspace or the workspace we have
-    // doesn't satisfy the edge. try to fetch a manifest and build a node from that.
-    return this.#fetchManifest(spec)
-      .then(pkg => new Node({ name, pkg, parent, installLinks, legacyPeerDeps }), error => {
-        error.requiredBy = edge.from.location || '.'
-
-        // failed to load the spec, either because of enotarget or
-        // fetch failure of some other sort.  save it so we can verify
-        // later that it's optional, otherwise the error is fatal.
-        const n = new Node({
-          name,
-          parent,
-          error,
-          installLinks,
-          legacyPeerDeps,
-        })
-        this.#loadFailures.add(n)
-        return n
-      })
-  }
-
-  #linkFromSpec (name, spec, parent) {
-    const realpath = spec.fetchSpec
-    const { installLinks, legacyPeerDeps } = this
-    return rpj(realpath + '/package.json').catch(() => ({})).then(pkg => {
-      const link = new Link({ name, parent, realpath, pkg, installLinks, legacyPeerDeps })
-      this.#linkNodes.add(link)
-      return link
-    })
-  }
-
-  // load all peer deps and meta-peer deps into the node's parent
-  // At the end of this, the node's peer-type outward edges are all
-  // resolved, and so are all of theirs, but other dep types are not.
-  // We prefer to get peer deps that meet the requiring node's dependency,
-  // if possible, since that almost certainly works (since that package was
-  // developed with this set of deps) and will typically be more restrictive.
-  // Note that the peers in the set can conflict either with each other,
-  // or with a direct dependency from the virtual root parent!  In strict
-  // mode, this is always an error.  In force mode, it never is, and we
-  // prefer the parent's non-peer dep over a peer dep, or the version that
-  // gets placed first.  In non-strict mode, we behave strictly if the
-  // virtual root is based on the root project, and allow non-peer parent
-  // deps to override, but throw if no preference can be determined.
-  async #loadPeerSet (node, required) {
-    const peerEdges = [...node.edgesOut.values()]
-      // we typically only install non-optional peers, but we have to
-      // factor them into the peerSet so that we can avoid conflicts
-      .filter(e => e.peer && !(e.valid && e.to))
-      .sort(({ name: a }, { name: b }) => localeCompare(a, b))
-
-    for (const edge of peerEdges) {
-      // already placed this one, and we're happy with it.
-      if (edge.valid && edge.to) {
-        continue
-      }
-
-      const parentEdge = node.parent.edgesOut.get(edge.name)
-      const { isProjectRoot, isWorkspace } = node.parent.sourceReference
-      const isMine = isProjectRoot || isWorkspace
-      const conflictOK = this.options.force || !isMine && !this.#strictPeerDeps
-
-      if (!edge.to) {
-        if (!parentEdge) {
-          // easy, just put the thing there
-          await this.#nodeFromEdge(edge, node.parent, null, required)
-          continue
-        } else {
-          // if the parent's edge is very broad like >=1, and the edge in
-          // question is something like 1.x, then we want to get a 1.x, not
-          // a 2.x.  pass along the child edge as an advisory guideline.
-          // if the parent edge doesn't satisfy the child edge, and the
-          // child edge doesn't satisfy the parent edge, then we have
-          // a conflict.  this is always a problem in strict mode, never
-          // in force mode, and a problem in non-strict mode if this isn't
-          // on behalf of our project.  in all such cases, we warn at least.
-          const dep = await this.#nodeFromEdge(
-            parentEdge,
-            node.parent,
-            edge,
-            required
-          )
-
-          // hooray! that worked!
-          if (edge.valid) {
-            continue
-          }
-
-          // allow it.  either we're overriding, or it's not something
-          // that will be installed by default anyway, and we'll fail when
-          // we get to the point where we need to, if we need to.
-          if (conflictOK || !required.has(dep)) {
-            edge.peerConflicted = true
-            continue
-          }
-
-          // problem
-          this.#failPeerConflict(edge, parentEdge)
-        }
-      }
-
-      // There is something present already, and we're not happy about it
-      // See if the thing we WOULD be happy with is also going to satisfy
-      // the other dependents on the current node.
-      const current = edge.to
-      const dep = await this.#nodeFromEdge(edge, null, null, required)
-      if (dep.canReplace(current)) {
-        await this.#nodeFromEdge(edge, node.parent, null, required)
-        continue
-      }
-
-      // at this point we know that there is a dep there, and
-      // we don't like it.  always fail strictly, always allow forcibly or
-      // in non-strict mode if it's not our fault.  don't warn here, because
-      // we are going to warn again when we place the deps, if we end up
-      // overriding for something else.  If the thing that has this dep
-      // isn't also required, then there's a good chance we won't need it,
-      // so allow it for now and let it conflict if it turns out to actually
-      // be necessary for the installation.
-      if (conflictOK || !required.has(edge.from)) {
-        continue
-      }
-
-      // ok, it's the root, or we're in unforced strict mode, so this is bad
-      this.#failPeerConflict(edge, parentEdge)
-    }
-    return node
-  }
-
-  #failPeerConflict (edge, currentEdge) {
-    const expl = this.#explainPeerConflict(edge, currentEdge)
-    throw Object.assign(new Error('unable to resolve dependency tree'), expl)
-  }
-
-  #explainPeerConflict (edge, currentEdge) {
-    const node = edge.from
-    const curNode = node.resolve(edge.name)
-    const current = curNode.explain()
-    return {
-      code: 'ERESOLVE',
-      current,
-      // it SHOULD be impossible to get here without a current node in place,
-      // but this at least gives us something report on when bugs creep into
-      // the tree handling logic.
-      currentEdge: currentEdge ? currentEdge.explain() : null,
-      edge: edge.explain(),
-      strictPeerDeps: this.#strictPeerDeps,
-      force: this.options.force,
-    }
-  }
-
-  // go through all the links in the this.#linkNodes set
-  // for each one:
-  // - if outside the root, ignore it, assume it's fine, it's not our problem
-  // - if a node in the tree already, assign the target to that node.
-  // - if a path under an existing node, then assign that as the fsParent,
-  //   and add it to the _depsQueue
-  //
-  // call buildDepStep if anything was added to the queue, otherwise we're done
-  #resolveLinks () {
-    for (const link of this.#linkNodes) {
-      this.#linkNodes.delete(link)
-
-      // link we never ended up placing, skip it
-      if (link.root !== this.idealTree) {
-        continue
-      }
-
-      const tree = this.idealTree.target
-      const external = !link.target.isDescendantOf(tree)
-
-      // outside the root, somebody else's problem, ignore it
-      if (external && !this.#follow) {
-        continue
-      }
-
-      // didn't find a parent for it or it has not been seen yet
-      // so go ahead and process it.
-      const unseenLink = (link.target.parent || link.target.fsParent) &&
-        !this.#depsSeen.has(link.target)
-
-      if (this.#follow &&
-          !link.target.parent &&
-          !link.target.fsParent ||
-          unseenLink) {
-        this.addTracker('idealTree', link.target.name, link.target.location)
-        this.#depsQueue.push(link.target)
-      }
-    }
-
-    if (this.#depsQueue.length) {
-      return this.#buildDepStep()
-    }
-  }
-
-  #fixDepFlags () {
-    const timeEnd = time.start('idealTree:fixDepFlags')
-    const metaFromDisk = this.idealTree.meta.loadedFromDisk
-    const flagsSuspect = this[_flagsSuspect]
-    const mutateTree = this.#mutateTree
-    // if the options set prune:false, then we don't prune, but we still
-    // mark the extraneous items in the tree if we modified it at all.
-    // If we did no modifications, we just iterate over the extraneous nodes.
-    // if we started with an empty tree, then the dep flags are already
-    // all set to true, and there can be nothing extraneous, so there's
-    // nothing to prune, because we built it from scratch.  if we didn't
-    // add or remove anything, then also nothing to do.
-    if (metaFromDisk && mutateTree) {
-      resetDepFlags(this.idealTree)
-    }
-
-    // update all the dev/optional/etc flags in the tree
-    // either we started with a fresh tree, or we
-    // reset all the flags to find the extraneous nodes.
-    //
-    // if we started from a blank slate, or changed something, then
-    // the dep flags will be all set to true.
-    if (!metaFromDisk || mutateTree) {
-      calcDepFlags(this.idealTree)
-    } else {
-      // otherwise just unset all the flags on the root node
-      // since they will sometimes have the default value
-      this.idealTree.extraneous = false
-      this.idealTree.dev = false
-      this.idealTree.optional = false
-      this.idealTree.devOptional = false
-      this.idealTree.peer = false
-    }
-
-    // at this point, any node marked as extraneous should be pruned.
-    // if we started from a shrinkwrap, and then added/removed something,
-    // then the tree is suspect.  Prune what is marked as extraneous.
-    // otherwise, don't bother.
-    const needPrune = metaFromDisk && (mutateTree || flagsSuspect)
-    if (this.#prune && needPrune) {
-      this.#idealTreePrune()
-      for (const node of this.idealTree.inventory.values()) {
-        if (node.extraneous) {
-          node.parent = null
-        }
-      }
-    }
-
-    timeEnd()
-  }
-
-  #applyRootOverridesToWorkspaces (tree) {
-    const rootOverrides = tree.root.package.overrides || {}
-
-    for (const node of tree.root.inventory.values()) {
-      if (!node.isWorkspace) {
-        continue
-      }
-
-      for (const depName of Object.keys(rootOverrides)) {
-        const edge = node.edgesOut.get(depName)
-        const rootNode = tree.root.children.get(depName)
-
-        // safely skip if either edge or rootNode doesn't exist yet
-        if (!edge || !rootNode) {
-          continue
-        }
-
-        const resolvedRootVersion = rootNode.package.version
-        if (!semver.satisfies(resolvedRootVersion, edge.spec)) {
-          edge.detach()
-          node.children.delete(depName)
-        }
-      }
-    }
-  }
-
-  #idealTreePrune () {
-    for (const node of this.idealTree.inventory.values()) {
-      if (node.extraneous) {
-        node.parent = null
-      }
-    }
-  }
-
-  #pruneFailedOptional () {
-    for (const node of this.#loadFailures) {
-      if (!node.optional) {
-        throw node.errors[0]
-      }
-
-      const set = optionalSet(node)
-      for (const node of set) {
-        node.ideallyInert = true
-      }
-    }
-  }
-
-  async prune (options = {}) {
-    // allow the user to set options on the ctor as well.
-    // XXX: deprecate separate method options objects.
-    options = { ...this.options, ...options }
-
-    await this.buildIdealTree(options)
-
-    this.#idealTreePrune()
-
-    if (!this.options.workspacesEnabled) {
-      const excludeNodes = this.excludeWorkspacesDependencySet(this.idealTree)
-      for (const node of this.idealTree.inventory.values()) {
-        if (
-          node.parent !== null
-          && !node.isProjectRoot
-          && !excludeNodes.has(node)
-          && !node.ideallyInert
-        ) {
-          this[_addNodeToTrashList](node)
-        }
-      }
-    }
-
-    return this.reify(options)
-  }
-}