facult 2.6.0 → 2.7.1

package/src/audit/tui.ts

@@ -1,9 +1,13 @@
-import { homedir } from "node:os";
+import { mkdtemp } from "node:fs/promises";
+import { homedir, tmpdir } from "node:os";
 import { join } from "node:path";
 import {
+  cancel,
   confirm,
+  group,
   intro,
   isCancel,
+  log,
   multiselect,
   note,
   outro,
@@ -15,7 +19,14 @@ import { buildIndex } from "../index-builder";
 import { facultRootDir, facultStateDir, readFacultConfig } from "../paths";
 import { type QuarantineMode, quarantineItems } from "../quarantine";
 import { type AgentAuditReport, runAgentAudit } from "./agent";
+import { fixInlineMcpSecrets, removeFixedInlineSecretFindings } from "./fix";
 import { runStaticAudit } from "./static";
+import {
+  applyAuditSuppressionsToAgentReport,
+  applyAuditSuppressionsToStaticReport,
+  loadAuditSuppressions,
+  recordAuditSuppressions,
+} from "./suppressions";
 import {
   type AuditFinding,
   type AuditItemResult,
@@ -23,6 +34,10 @@ import {
   type Severity,
   type StaticAuditReport,
 } from "./types";
+import { updateIndexFromAuditReport } from "./update-index";
+
+type InteractiveReviewerTool = "codex" | "claude";
+const AUDIT_RULE_PREFIX_RE = /^(static|agent):/;
 
 function parseFromFlags(argv: string[]): string[] {
   const from: string[] = [];
@@ -196,6 +211,170 @@ function viewFindingDetails(r: AuditItemResult) {
   note(lines.join("\n"), "Findings");
 }
 
+function availableInteractiveReviewerTools(): InteractiveReviewerTool[] {
+  return [
+    ...(Bun.which("codex") ? (["codex"] as const) : []),
+    ...(Bun.which("claude") ? (["claude"] as const) : []),
+  ];
+}
+
+function findingsSummary(findings: AuditFinding[]): string {
+  return findings
+    .map((finding) => {
+      const location = finding.location ? ` @ ${finding.location}` : "";
+      return `- [${finding.severity}] ${finding.ruleId}${location}: ${finding.message}`;
+    })
+    .join("\n");
+}
+
+function buildReviewerPrompt(args: {
+  items: AuditItemResult[];
+  reviewMode: "static" | "agent" | "combined";
+  cwd: string;
+}): string {
+  const itemBlocks = args.items.map((item, index) =>
+    [
+      `${index + 1}. ${item.type}:${item.item}`,
+      `Path: ${item.path}`,
+      `Passed: ${item.passed ? "yes" : "no"}`,
+      item.sourceId ? `Source: ${item.sourceId}` : "",
+      item.notes ? `Notes: ${item.notes}` : "",
+      "Findings:",
+      findingsSummary(item.findings),
+    ]
+      .filter(Boolean)
+      .join("\n")
+  );
+
+  return [
+    "Review these audit findings and help reconcile them.",
+    "These findings came from `fclt audit`.",
+    `Current repo: ${args.cwd}`,
+    `Audit view: ${args.reviewMode}`,
+    "",
+    "What to do:",
+    "- Inspect the listed files directly.",
+    "- Validate whether each finding is real, stale, or acceptable.",
+    "- Group related issues when the same fix addresses multiple findings.",
+    "- Propose the safest order to handle them.",
+    "- If a fix is straightforward, suggest or implement it in this session.",
+    "- Prefer fixing the canonical `.ai` source once when the same MCP issue appears in multiple tool configs.",
+    "- If an MCP secret needs remediation, use the `fclt audit fix ...` flow before suggesting manual edits.",
+    "",
+    "Useful `fclt` commands in this repo:",
+    "- `fclt show mcp:<name>` to inspect the canonical MCP entry.",
+    "- `fclt audit fix <item>` to move inline MCP secrets into the local canonical overlay.",
+    "- `fclt audit safe ...` to suppress a reviewed false positive.",
+    "- `fclt manage <tool>` or `fclt sync [tool]` when a managed tool config needs to be re-rendered.",
+    "",
+    "Selected findings:",
+    ...itemBlocks,
+  ].join("\n");
+}
+
+async function launchInteractiveReviewer(args: {
+  tool: InteractiveReviewerTool;
+  prompt: string;
+  cwd: string;
+}): Promise<number> {
+  const promptDir = await mkdtemp(join(tmpdir(), "facult-audit-review-"));
+  const promptPath = join(promptDir, "prompt.md");
+  await Bun.write(promptPath, `${args.prompt}\n`);
+  const promptText = await Bun.file(promptPath).text();
+
+  const cmd =
+    args.tool === "codex"
+      ? ["codex", "--no-alt-screen", "-C", args.cwd, promptText]
+      : ["claude", promptText];
+
+  const proc = Bun.spawn({
+    cmd,
+    cwd: args.cwd,
+    stdin: "inherit",
+    stdout: "inherit",
+    stderr: "inherit",
+  });
+
+  return await proc.exited;
+}
+
+function viewMultipleFindingDetails(items: AuditItemResult[]) {
+  const blocks = items.map((item) => {
+    const lines: string[] = [];
+    lines.push(`${item.type}:${item.item}`);
+    lines.push(`Path: ${item.path}`);
+    if (item.sourceId) {
+      lines.push(`Source: ${item.sourceId}`);
+    }
+    lines.push(
+      ...item.findings.map((finding) => {
+        const location = finding.location ? ` @ ${finding.location}` : "";
+        return `- [${finding.severity}] ${finding.ruleId}${location}: ${finding.message}`;
+      })
+    );
+    return lines.join("\n");
+  });
+
+  note(blocks.join("\n\n"), "Selected findings");
+}
+
+function inlineSecretSelectionLabel(selection: {
+  result: AuditItemResult;
+  finding: AuditFinding;
+}): string {
+  const location = selection.finding.location
+    ? ` @ ${selection.finding.location}`
+    : "";
+  return `[${selection.finding.severity.toUpperCase()}] ${selection.result.item}${location}`;
+}
+
+function labelForFindingSelection(args: {
+  result: AuditItemResult;
+  finding: AuditFinding;
+}): string {
+  const location = args.finding.location ? ` @ ${args.finding.location}` : "";
+  return `[${args.finding.severity.toUpperCase()}] ${args.result.type}:${args.result.item} — ${args.finding.ruleId}${location}`;
+}
+
+function hintForFindingSelection(args: {
+  result: AuditItemResult;
+  finding: AuditFinding;
+}): string {
+  return `${args.result.path} — ${args.finding.message}`;
+}
+
+function sortReviewQueue(results: AuditItemResult[]): AuditItemResult[] {
+  return results
+    .filter((result) => result.findings.length > 0)
+    .sort((a, b) => {
+      const sa = SEVERITY_ORDER[maxSeverity(a.findings) ?? "low"];
+      const sb = SEVERITY_ORDER[maxSeverity(b.findings) ?? "low"];
+      return (
+        sb - sa || a.type.localeCompare(b.type) || a.item.localeCompare(b.item)
+      );
+    });
+}
+
+function summarizeRoots(args: {
+  includeConfigFrom: boolean;
+  from: string[];
+  cfgRoots: string[];
+}): string {
+  const parts: string[] = [];
+  if (args.includeConfigFrom && args.cfgRoots.length > 0) {
+    parts.push("configured scanFrom roots");
+  }
+  if (args.from.length > 0) {
+    parts.push(args.from.join(", "));
+  }
+  if (parts.length === 0) {
+    return "tool defaults only";
+  }
+  return parts.join(" + ");
+}
+
+const AUDIT_TUI_CANCELLED = "audit-tui-cancelled";
+
 function printHelp() {
   console.log(`fclt audit tui — interactive security audit + quarantine
 
@@ -226,9 +405,8 @@ export async function auditTuiCommand(argv: string[]) {
   intro("fclt audit");
 
   if (cfgRoots.length) {
-    note(
-      `Configured scanFrom roots:\n- ${cfgRoots.join("\n- ")}`,
-      "~/.ai/.facult/config.json"
+    log.info(
+      `Loaded ${cfgRoots.length} configured scan root${cfgRoots.length === 1 ? "" : "s"} from ~/.ai/.facult/config.json.`
     );
   }
 
@@ -237,158 +415,227 @@ export async function auditTuiCommand(argv: string[]) {
     ...(Bun.which("codex") ? ["codex" as const] : []),
   ];
 
-  const mode = await select({
-    message: "What should we run?",
-    options: [
-      {
-        value: "static",
-        label: "Static audit (fast)",
-        hint: "regex + structured checks",
-      },
-      ...(availableAgentTools.length
-        ? [
-            {
-              value: "both",
-              label: "Static + agent audit",
-              hint: "best coverage",
-            },
-            {
-              value: "agent",
-              label: "Agent audit (slower)",
-              hint: "LLM review",
-            },
-          ]
-        : []),
-    ],
-  });
-  if (isCancel(mode)) {
-    outro("Cancelled.");
-    return;
-  }
+  let setup:
+    | {
+        mode?: unknown;
+        scope?: unknown;
+        roots?: unknown;
+        includeGitHooks?: unknown;
+        minSeverity?: unknown;
+        agentTool?: unknown;
+        maxItems?: unknown;
+      }
+    | undefined;
 
-  const scope = await select({
-    message: "Audit scope",
-    options: [
+  try {
+    setup = await group(
       {
-        value: "defaults",
-        label: "Defaults only",
-        hint: "tool defaults; fastest",
+        mode: () =>
+          select({
+            message: "What kind of audit do you want to run?",
+            options: [
+              {
+                value: "static",
+                label: "Static only",
+                hint: "fast regex and structured checks",
+              },
+              ...(availableAgentTools.length
+                ? [
+                    {
+                      value: "both",
+                      label: "Static + agent",
+                      hint: "best coverage",
+                    },
+                    {
+                      value: "agent",
+                      label: "Agent only",
+                      hint: "slower LLM review",
+                    },
+                  ]
+                : []),
+            ],
+          }),
+        scope: () =>
+          select({
+            message: "Where should the audit look?",
+            options: [
+              {
+                value: "defaults",
+                label: "Defaults only",
+                hint: "fastest",
+              },
+              {
+                value: "home",
+                label: "Home directory (~)",
+                hint: "broad local discovery",
+              },
+              {
+                value: "custom",
+                label: "Custom roots",
+                hint: "enter a comma-separated list",
+              },
+              ...(cfgRoots.length
+                ? [
+                    {
+                      value: "config",
+                      label: "Configured scanFrom roots",
+                      hint: "from ~/.ai/.facult/config.json",
+                    },
+                  ]
+                : []),
+            ],
+          }),
+        roots: ({ results }) =>
+          results.scope === "custom"
+            ? text({
+                message: "Roots to scan",
+                placeholder: parsedFrom.length
+                  ? parsedFrom.join(", ")
+                  : "~, ~/dev",
+              })
+            : undefined,
+        includeGitHooks: () =>
+          confirm({
+            message: "Include git hooks (.husky and .git/hooks)?",
+            initialValue: false,
+            active: "Include",
+            inactive: "Skip",
+          }),
+        minSeverity: ({ results }) =>
+          results.mode === "static" || results.mode === "both"
+            ? select({
+                message: "Minimum severity to review",
+                options: [
+                  { value: "high", label: "high", hint: "recommended" },
+                  {
+                    value: "critical",
+                    label: "critical",
+                    hint: "critical only",
+                  },
+                  {
+                    value: "medium",
+                    label: "medium",
+                    hint: "medium and above",
+                  },
+                  { value: "low", label: "low", hint: "show everything" },
+                ],
+                initialValue: "high",
+              })
+            : undefined,
+        agentTool: ({ results }) => {
+          if (results.mode !== "agent" && results.mode !== "both") {
+            return undefined;
+          }
+          if (availableAgentTools.length === 0) {
+            return undefined;
+          }
+          if (availableAgentTools.length === 1) {
+            return Promise.resolve(availableAgentTools[0]);
+          }
+          return select({
+            message: "Which agent tool should review the items?",
+            options: availableAgentTools.map((tool) => ({
+              value: tool,
+              label: tool,
+            })),
+          });
+        },
+        maxItems: ({ results }) =>
+          results.mode === "agent" || results.mode === "both"
+            ? text({
+                message: "Max items to send to the agent",
+                placeholder: "50 (or all)",
+                defaultValue: "50",
+              })
+            : undefined,
       },
       {
-        value: "home",
-        label: "Home directory (~)",
-        hint: "broad project discovery",
-      },
-      { value: "custom", label: "Custom roots", hint: "comma-separated list" },
-      ...(cfgRoots.length
-        ? [
-            {
-              value: "config",
-              label: "Use configured scanFrom",
-              hint: "from ~/.ai/.facult/config.json",
-            },
-          ]
-        : []),
-    ],
-  });
-  if (isCancel(scope)) {
-    outro("Cancelled.");
-    return;
+        onCancel: () => {
+          cancel("Cancelled.");
+          throw new Error(AUDIT_TUI_CANCELLED);
+        },
+      }
+    );
+  } catch (err) {
+    if (err instanceof Error && err.message === AUDIT_TUI_CANCELLED) {
+      return;
+    }
+    throw err;
   }
 
+  const mode = setup?.mode as "static" | "agent" | "both";
+  const scope = setup?.scope as "defaults" | "home" | "custom" | "config";
+  const includeGitHooks = setup?.includeGitHooks === true;
+
   let includeConfigFrom = !noConfigFrom;
   let from: string[] = [];
   if (scope === "defaults") {
     includeConfigFrom = false;
-    from = [];
   } else if (scope === "home") {
     from = parsedFrom.length ? parsedFrom : ["~"];
   } else if (scope === "config") {
     from = parsedFrom;
   } else {
-    const raw = await text({
-      message: "Roots to scan (comma-separated)",
-      placeholder: parsedFrom.length ? parsedFrom.join(", ") : "~, ~/dev",
-    });
-    if (isCancel(raw)) {
-      outro("Cancelled.");
-      return;
-    }
-    from = String(raw)
+    from = String(setup?.roots ?? "")
       .split(",")
-      .map((s) => s.trim())
+      .map((value) => value.trim())
       .filter(Boolean);
   }
 
-  const includeGitHooks = await confirm({
-    message: "Include git hooks (husky + .git/hooks)?",
-    initialValue: false,
-  });
-  if (isCancel(includeGitHooks)) {
-    outro("Cancelled.");
-    return;
-  }
-
   let minSeverity: Severity = "high";
-  if (mode === "static" || mode === "both") {
-    const sev = await select({
-      message: "Minimum severity to show",
-      options: [
-        { value: "critical", label: "critical", hint: "only critical" },
-        { value: "high", label: "high", hint: "high + critical" },
-        { value: "medium", label: "medium", hint: "medium + above" },
-        { value: "low", label: "low", hint: "everything" },
-      ],
-    });
-    if (isCancel(sev)) {
-      outro("Cancelled.");
-      return;
-    }
-    minSeverity = sev as Severity;
+  if (
+    (setup?.minSeverity === "critical" ||
+      setup?.minSeverity === "high" ||
+      setup?.minSeverity === "medium" ||
+      setup?.minSeverity === "low") &&
+    (mode === "static" || mode === "both")
+  ) {
+    minSeverity = setup.minSeverity;
   }
 
   let agentTool: "claude" | "codex" | null = null;
+  if (setup?.agentTool === "claude" || setup?.agentTool === "codex") {
+    agentTool = setup.agentTool;
+  }
+
   let maxItems = 50;
   if (mode === "agent" || mode === "both") {
     if (availableAgentTools.length === 0) {
-      note('No agent tool found. Install "claude" or "codex".', "Agent audit");
-    } else if (availableAgentTools.length === 1) {
-      agentTool = availableAgentTools[0] ?? null;
-    } else {
-      const chosen = await select({
-        message: "Agent tool",
-        options: availableAgentTools.map((t) => ({
-          value: t,
-          label: t,
-        })),
-      });
-      if (isCancel(chosen)) {
-        outro("Cancelled.");
-        return;
-      }
-      agentTool = chosen as "claude" | "codex";
-    }
-
-    const rawMax = await text({
-      message: "Max items to send to the agent",
-      placeholder: "50 (or 'all')",
-      defaultValue: String(maxItems),
-    });
-    if (isCancel(rawMax)) {
-      outro("Cancelled.");
-      return;
+      log.warn(
+        'No agent tool found. Install "claude" or "codex" to run an agent audit.'
+      );
     }
-    const raw = String(rawMax).trim().toLowerCase();
+    const raw = String(setup?.maxItems ?? "")
+      .trim()
+      .toLowerCase();
     if (raw === "all" || raw === "0") {
       maxItems = 0;
     } else {
-      const n = Number(raw);
-      if (Number.isFinite(n) && n > 0) {
-        maxItems = Math.floor(n);
+      const parsed = Number(raw);
+      if (Number.isFinite(parsed) && parsed > 0) {
+        maxItems = Math.floor(parsed);
       }
     }
   }
 
+  note(
+    [
+      `Mode: ${mode}`,
+      `Roots: ${summarizeRoots({ includeConfigFrom, from, cfgRoots })}`,
+      `Git hooks: ${includeGitHooks ? "included" : "skipped"}`,
+      ...(mode === "static" || mode === "both"
+        ? [`Minimum severity: ${minSeverity}`]
+        : []),
+      ...(mode === "agent" || mode === "both"
+        ? [
+            `Agent tool: ${agentTool ?? "not available"}`,
+            `Agent max items: ${maxItems === 0 ? "all" : String(maxItems)}`,
+          ]
+        : []),
+    ].join("\n"),
+    "Plan"
+  );
+
   const reports: { static?: StaticAuditReport; agent?: AgentAuditReport } = {};
 
   if (mode === "static" || mode === "both") {
@@ -404,6 +651,9 @@ export async function auditTuiCommand(argv: string[]) {
         from,
       });
       sp.stop("Static audit complete.");
+      if (reports.static) {
+        log.success(`Static summary: ${summarizeReportStatic(reports.static)}`);
+      }
     } catch (err) {
       sp.stop("Static audit failed.");
       outro(err instanceof Error ? err.message : String(err));
@@ -436,6 +686,9 @@ export async function auditTuiCommand(argv: string[]) {
         },
       });
       sp.stop("Agent audit complete.");
+      if (reports.agent) {
+        log.success(`Agent summary: ${summarizeReportAgent(reports.agent)}`);
+      }
     } catch (err) {
       sp.stop("Agent audit failed.");
       outro(err instanceof Error ? err.message : String(err));
@@ -444,30 +697,16 @@ export async function auditTuiCommand(argv: string[]) {
     }
   }
 
-  const summaries: string[] = [];
   if (reports.static) {
-    summaries.push(`Static: ${summarizeReportStatic(reports.static)}`);
-    summaries.push(
-      `Wrote ${join(facultStateDir(homedir()), "audit", "static-latest.json")}`
+    log.info(
+      `Static report saved to ${join(facultStateDir(homedir()), "audit", "static-latest.json")}`
     );
   }
   if (reports.agent) {
-    summaries.push(`Agent: ${summarizeReportAgent(reports.agent)}`);
-    summaries.push(
-      `Wrote ${join(facultStateDir(homedir()), "audit", "agent-latest.json")}`
+    log.info(
+      `Agent report saved to ${join(facultStateDir(homedir()), "audit", "agent-latest.json")}`
     );
   }
-  if (summaries.length) {
-    note(summaries.join("\n"), "Summary");
-  }
-
-  const combined = uniqueByKey(
-    mergeStaticAndAgentResults({
-      static: reports.static?.results ?? [],
-      agent: reports.agent?.results ?? [],
-    }),
-    keyForResult
-  );
 
   let review: "static" | "agent" | "combined" = reports.agent
     ? "agent"
@@ -491,42 +730,77 @@ export async function auditTuiCommand(argv: string[]) {
     }
   }
 
-  const results =
-    review === "combined"
-      ? combined
-      : review === "agent"
-        ? (reports.agent?.results ?? [])
-        : (reports.static?.results ?? []);
+  const suppressions = await loadAuditSuppressions(homedir());
+  let staticReport = reports.static
+    ? applyAuditSuppressionsToStaticReport(reports.static, suppressions)
+    : undefined;
+  let agentReport = reports.agent
+    ? applyAuditSuppressionsToAgentReport(reports.agent, suppressions)
+    : undefined;
 
-  const withFindings = results
-    .filter((r) => r.findings.length > 0)
-    .sort((a, b) => {
-      const sa = SEVERITY_ORDER[maxSeverity(a.findings) ?? "low"];
-      const sb = SEVERITY_ORDER[maxSeverity(b.findings) ?? "low"];
-      return (
-        sb - sa || a.type.localeCompare(b.type) || a.item.localeCompare(b.item)
-      );
-    });
+  let results: AuditItemResult[] = [];
+  let withFindings: AuditItemResult[] = [];
+  const refreshReviewState = () => {
+    const combined = uniqueByKey(
+      mergeStaticAndAgentResults({
+        static: staticReport?.results ?? [],
+        agent: agentReport?.results ?? [],
+      }),
+      keyForResult
+    );
+    results =
+      review === "combined"
+        ? combined
+        : review === "agent"
+          ? (agentReport?.results ?? [])
+          : (staticReport?.results ?? []);
+    withFindings = sortReviewQueue(results);
+  };
+  refreshReviewState();
 
   if (withFindings.length === 0) {
-    outro("No findings.");
+    outro("No findings above the selected threshold.");
     return;
   }
 
   const failCount = withFindings.filter((r) => !r.passed).length;
   const warnCount = withFindings.length - failCount;
-  note(`fail=${failCount} warn=${warnCount}`, "Review");
+  log.warn(`Review queue: ${failCount} fail, ${warnCount} warn.`);
 
   while (true) {
     const action = await select({
-      message: "Next action",
+      message: "What do you want to do next?",
       options: [
         {
           value: "quarantine",
           label: "Quarantine items",
           hint: "move/copy to ~/.ai/.facult/quarantine",
         },
-        { value: "view", label: "View item details", hint: "inspect findings" },
+        {
+          value: "view",
+          label: "Inspect one item",
+          hint: "open finding details",
+        },
+        {
+          value: "view-many",
+          label: "Inspect several items",
+          hint: "review multiple findings together",
+        },
+        {
+          value: "review-ai",
+          label: "Review with AI",
+          hint: "hand off selected findings to Codex or Claude",
+        },
+        {
+          value: "fix-inline-secrets",
+          label: "Fix inline MCP secrets",
+          hint: "move secrets into local canonical overlay and re-sync",
+        },
+        {
+          value: "mark-safe",
+          label: "Mark findings safe",
+          hint: "suppress reviewed false positives in future audits",
+        },
         { value: "exit", label: "Exit", hint: "leave files unchanged" },
       ],
     });
@@ -538,7 +812,7 @@ export async function auditTuiCommand(argv: string[]) {
     if (action === "view") {
       const viewList = withFindings.slice(0, 200);
       const chosen = await select({
-        message: "Pick an item to view",
+        message: "Pick an item to inspect",
         options: viewList.map((r, idx) => ({
           value: String(idx),
           label: labelForResult(r),
@@ -556,6 +830,343 @@ export async function auditTuiCommand(argv: string[]) {
       continue;
     }
 
+    if (action === "view-many") {
+      const viewList = withFindings.slice(0, 100);
+      const picked = await multiselect({
+        message: "Select findings to inspect together",
+        options: viewList.map((r, idx) => ({
+          value: String(idx),
+          label: labelForResult(r),
+          hint: hintForResult(r),
+        })),
+        required: true,
+      });
+      if (isCancel(picked)) {
+        continue;
+      }
+      const selected = (picked as string[])
+        .map((value) => viewList[Number(value)])
+        .filter(Boolean) as AuditItemResult[];
+      if (selected.length === 0) {
+        continue;
+      }
+      viewMultipleFindingDetails(selected);
+      continue;
+    }
+
+    if (action === "review-ai") {
+      const tools = availableInteractiveReviewerTools();
+      if (tools.length === 0) {
+        log.warn('No interactive reviewer found. Install "codex" or "claude".');
+        continue;
+      }
+
+      const reviewList = withFindings.slice(0, 100);
+      const picked = await multiselect({
+        message: "Select findings to review with AI",
+        options: reviewList.map((r, idx) => ({
+          value: String(idx),
+          label: labelForResult(r),
+          hint: hintForResult(r),
+        })),
+        initialValues: reviewList
+          .slice(0, Math.min(reviewList.length, 8))
+          .map((_, idx) => String(idx)),
+        required: true,
+      });
+      if (isCancel(picked)) {
+        continue;
+      }
+      const selected = (picked as string[])
+        .map((value) => reviewList[Number(value)])
+        .filter(Boolean) as AuditItemResult[];
+      if (selected.length === 0) {
+        continue;
+      }
+
+      const tool =
+        tools.length === 1
+          ? tools[0]
+          : ((await select({
+              message: "Which reviewer should take this handoff?",
+              options: tools.map((candidate) => ({
+                value: candidate,
+                label: candidate,
+                hint:
+                  candidate === "codex"
+                    ? "interactive code-focused review"
+                    : "interactive Claude review",
+              })),
+            })) as InteractiveReviewerTool | symbol);
+      if (isCancel(tool) || !tool) {
+        continue;
+      }
+
+      const prompt = buildReviewerPrompt({
+        items: selected,
+        reviewMode: review,
+        cwd: process.cwd(),
+      });
+
+      const ok = await confirm({
+        message: `Start an interactive ${tool} session with ${selected.length} selected finding${selected.length === 1 ? "" : "s"}?`,
+        initialValue: true,
+        active: "Start session",
+        inactive: "Cancel",
+      });
+      if (isCancel(ok) || ok !== true) {
+        continue;
+      }
+
+      log.step(`Launching ${tool} with the selected audit context...`);
+      const exitCode = await launchInteractiveReviewer({
+        tool,
+        prompt,
+        cwd: process.cwd(),
+      });
+      if (exitCode === 0) {
+        outro(
+          `Returned from ${tool}. Re-run audit when you want a fresh review queue.`
+        );
+      } else {
+        outro(`${tool} exited with code ${exitCode}.`);
+      }
+      return;
+    }
+
+    if (action === "fix-inline-secrets") {
+      const candidates = withFindings
+        .flatMap((result) =>
+          result.findings.map((finding) => ({
+            result,
+            finding,
+          }))
+        )
+        .filter(
+          (selection) =>
+            selection.result.type === "mcp" &&
+            selection.finding.ruleId.replace(AUDIT_RULE_PREFIX_RE, "") ===
+              "mcp-env-inline-secret"
+        )
+        .slice(0, 300);
+      if (candidates.length === 0) {
+        log.info("No fixable inline MCP secret findings in the current queue.");
+        continue;
+      }
+
+      const picked = await multiselect({
+        message: "Select inline MCP secret findings to fix",
+        options: candidates.map((candidate, idx) => ({
+          value: String(idx),
+          label: inlineSecretSelectionLabel(candidate),
+          hint: hintForFindingSelection(candidate),
+        })),
+        required: true,
+      });
+      if (isCancel(picked)) {
+        continue;
+      }
+
+      const selected = (picked as string[])
+        .map((value) => candidates[Number(value)])
+        .filter(Boolean) as {
+        result: AuditItemResult;
+        finding: AuditFinding;
+      }[];
+      if (selected.length === 0) {
+        continue;
+      }
+
+      const ok = await confirm({
+        message: `Fix ${selected.length} selected inline MCP secret finding${selected.length === 1 ? "" : "s"}?`,
+        initialValue: true,
+        active: "Fix now",
+        inactive: "Cancel",
+      });
+      if (isCancel(ok) || ok !== true) {
+        continue;
+      }
+
+      const fixResult = await fixInlineMcpSecrets({
+        findings: selected,
+        homeDir: homedir(),
+      });
+      if (fixResult.fixed === 0) {
+        log.warn("No selected findings could be fixed automatically.");
+        for (const skipped of fixResult.skipped.slice(0, 6)) {
+          log.info(`${skipped.label}: ${skipped.reason}`);
+        }
+        continue;
+      }
+
+      staticReport = staticReport
+        ? applyAuditSuppressionsToStaticReport(
+            {
+              ...staticReport,
+              results: removeFixedInlineSecretFindings({
+                results: staticReport.results,
+                fixed: fixResult.fixedSelections,
+              }),
+            },
+            []
+          )
+        : undefined;
+      agentReport = agentReport
+        ? applyAuditSuppressionsToAgentReport(
+            {
+              ...agentReport,
+              results: removeFixedInlineSecretFindings({
+                results: agentReport.results,
+                fixed: fixResult.fixedSelections,
+              }),
+            },
+            []
+          )
+        : undefined;
+      refreshReviewState();
+
+      if (staticReport) {
+        await Bun.write(
+          join(facultStateDir(homedir()), "audit", "static-latest.json"),
+          `${JSON.stringify(staticReport, null, 2)}\n`
+        );
+      }
+      if (agentReport) {
+        await Bun.write(
+          join(facultStateDir(homedir()), "audit", "agent-latest.json"),
+          `${JSON.stringify(agentReport, null, 2)}\n`
+        );
+      }
+
+      await updateIndexFromAuditReport({
+        homeDir: homedir(),
+        timestamp: new Date().toISOString(),
+        results: uniqueByKey(
+          mergeStaticAndAgentResults({
+            static: staticReport?.results ?? [],
+            agent: agentReport?.results ?? [],
+          }),
+          keyForResult
+        ),
+      });
+
+      log.success(
+        `Fixed ${fixResult.fixed} inline MCP secret finding${fixResult.fixed === 1 ? "" : "s"}.`
+      );
+      if (fixResult.trackedPath && fixResult.localPath) {
+        log.info(`Tracked MCP config: ${fixResult.trackedPath}`);
+        log.info(`Local MCP overlay: ${fixResult.localPath}`);
+      }
+      if (fixResult.syncedTools.length > 0) {
+        log.info(
+          `Re-synced managed tools: ${fixResult.syncedTools.join(", ")}`
+        );
+      }
+      if (fixResult.riskyManagedOutputs.length > 0) {
+        for (const output of fixResult.riskyManagedOutputs) {
+          log.warn(
+            `${output.path} is ${output.state === "tracked" ? "git-tracked" : "repo-local and not gitignored"}.`
+          );
+        }
+      }
+      if (fixResult.skipped.length > 0) {
+        log.warn(
+          `Skipped ${fixResult.skipped.length} finding${fixResult.skipped.length === 1 ? "" : "s"} that still need manual review.`
+        );
+      }
+      continue;
+    }
+
+    if (action === "mark-safe") {
+      const candidates = withFindings
+        .flatMap((result) =>
+          result.findings.map((finding) => ({
+            result,
+            finding,
+          }))
+        )
+        .slice(0, 300);
+      const picked = await multiselect({
+        message: "Select findings to mark safe",
+        options: candidates.map((candidate, idx) => ({
+          value: String(idx),
+          label: labelForFindingSelection(candidate),
+          hint: hintForFindingSelection(candidate),
+        })),
+        required: true,
+      });
+      if (isCancel(picked)) {
+        continue;
+      }
+
+      const selected = (picked as string[])
+        .map((value) => candidates[Number(value)])
+        .filter(Boolean) as {
+        result: AuditItemResult;
+        finding: AuditFinding;
+      }[];
+      if (selected.length === 0) {
+        continue;
+      }
+
+      const why = await text({
+        message: "Why is this safe?",
+        placeholder: "optional note for future reviews",
+      });
+      if (isCancel(why)) {
+        continue;
+      }
+
+      const ok = await confirm({
+        message: `Suppress ${selected.length} selected finding${selected.length === 1 ? "" : "s"} in future audits?`,
+        initialValue: true,
+        active: "Mark safe",
+        inactive: "Cancel",
+      });
+      if (isCancel(ok) || ok !== true) {
+        continue;
+      }
+
+      const saved = await recordAuditSuppressions({
+        homeDir: homedir(),
+        selected,
+        note: String(why ?? ""),
+      });
+      const nextSuppressions = await loadAuditSuppressions(homedir());
+      staticReport = staticReport
+        ? applyAuditSuppressionsToStaticReport(staticReport, nextSuppressions)
+        : undefined;
+      agentReport = agentReport
+        ? applyAuditSuppressionsToAgentReport(agentReport, nextSuppressions)
+        : undefined;
+      refreshReviewState();
+
+      await updateIndexFromAuditReport({
+        homeDir: homedir(),
+        timestamp: new Date().toISOString(),
+        results: uniqueByKey(
+          mergeStaticAndAgentResults({
+            static: staticReport?.results ?? [],
+            agent: agentReport?.results ?? [],
+          }),
+          keyForResult
+        ),
+      });
+
+      log.success(
+        `Marked ${selected.length} finding${selected.length === 1 ? "" : "s"} safe. Saved ${saved.added} new suppression${saved.added === 1 ? "" : "s"}.`
+      );
+      if (withFindings.length === 0) {
+        outro("All reviewed findings are now suppressed.");
+        return;
+      }
+
+      const failCount = withFindings.filter((result) => !result.passed).length;
+      const warnCount = withFindings.length - failCount;
+      log.info(`Updated review queue: ${failCount} fail, ${warnCount} warn.`);
+      continue;
+    }
+
     // quarantine
     const quarantineList = withFindings.slice(0, 500);
     const picked = await multiselect({
@@ -579,19 +1190,19 @@ export async function auditTuiCommand(argv: string[]) {
       .map((i) => quarantineList[i])
       .filter(Boolean) as AuditItemResult[];
     if (selected.length === 0) {
-      note("No items selected.", "Quarantine");
+      log.info("Quarantine: no items selected.");
       continue;
     }
 
     const modeChoice = await select({
-      message: "Quarantine mode",
+      message: "How should quarantine behave?",
       options: [
         {
           value: "move",
-          label: "Move (quarantine)",
+          label: "Move",
           hint: "removes from original location",
         },
-        { value: "copy", label: "Copy (snapshot)", hint: "non-destructive" },
+        { value: "copy", label: "Copy", hint: "non-destructive snapshot" },
       ],
     });
     if (isCancel(modeChoice)) {
@@ -636,12 +1247,14 @@ export async function auditTuiCommand(argv: string[]) {
       .join("\n");
     note(
       `${preview}${plan.manifest.entries.length > 12 ? `\n... (${plan.manifest.entries.length - 12} more)` : ""}`,
-      "Planned quarantine"
+      "Quarantine plan"
     );
 
     const ok = await confirm({
       message: "Proceed with quarantine?",
       initialValue: false,
+      active: "Proceed",
+      inactive: "Cancel",
     });
     if (isCancel(ok) || ok === false) {
       continue;
@@ -657,13 +1270,8 @@ export async function auditTuiCommand(argv: string[]) {
         destDir,
       });
       sp.stop("Quarantine complete.");
-      note(
-        `Quarantine directory:\n${res.quarantineDir}\n\nManifest:\n${join(
-          res.quarantineDir,
-          "manifest.json"
-        )}`,
-        "Quarantine"
-      );
+      log.success(`Quarantine directory: ${res.quarantineDir}`);
+      log.info(`Manifest: ${join(res.quarantineDir, "manifest.json")}`);
 
       // If we quarantined canonical-store paths, offer to rebuild the index so list/show stay accurate.
       if (qMode === "move") {
@@ -683,10 +1291,12 @@ export async function auditTuiCommand(argv: string[]) {
             try {
               const { outputPath } = await buildIndex({ force: false });
               isp.stop("Index rebuilt.");
-              note(`Index written to:\n${outputPath}`, "Index");
+              log.success(`Index rebuilt: ${outputPath}`);
             } catch (e: unknown) {
               isp.stop("Index rebuild failed.");
-              note(e instanceof Error ? e.message : String(e), "Index");
+              log.error(
+                `Index rebuild failed: ${e instanceof Error ? e.message : String(e)}`
+              );
             }
           }
         }