ezmedicationinput 0.1.15 → 0.1.17

package/dist/maps.js

@@ -1,9 +1,12 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.DEFAULT_UNIT_BY_ROUTE = exports.DEFAULT_UNIT_BY_NORMALIZED_FORM = exports.KNOWN_TMT_DOSAGE_FORM_TO_SNOMED_ROUTE = exports.KNOWN_DOSAGE_FORMS_TO_DOSE = exports.WORD_FREQUENCIES = exports.DAY_OF_WEEK_TOKENS = exports.DISCOURAGED_TOKENS = exports.MEAL_KEYWORDS = exports.EVENT_TIMING_TOKENS = exports.TIMING_ABBREVIATIONS = exports.DEFAULT_UNIT_SYNONYMS = exports.HOUSEHOLD_VOLUME_UNITS = exports.DEFAULT_BODY_SITE_SNOMED = exports.DEFAULT_ROUTE_SYNONYMS = exports.ROUTE_BY_SNOMED = exports.ROUTE_TEXT = exports.ROUTE_SNOMED = void 0;
+exports.DEFAULT_ADDITIONAL_INSTRUCTION_DEFINITIONS = exports.DEFAULT_ADDITIONAL_INSTRUCTION_ENTRIES = exports.DEFAULT_PRN_REASON_DEFINITIONS = exports.DEFAULT_PRN_REASON_ENTRIES = exports.DEFAULT_UNIT_BY_ROUTE = exports.DEFAULT_UNIT_BY_NORMALIZED_FORM = exports.KNOWN_TMT_DOSAGE_FORM_TO_SNOMED_ROUTE = exports.KNOWN_DOSAGE_FORMS_TO_DOSE = exports.WORD_FREQUENCIES = exports.DAY_OF_WEEK_TOKENS = exports.DISCOURAGED_TOKENS = exports.MEAL_KEYWORDS = exports.EVENT_TIMING_TOKENS = exports.TIMING_ABBREVIATIONS = exports.DEFAULT_UNIT_SYNONYMS = exports.HOUSEHOLD_VOLUME_UNITS = exports.DEFAULT_BODY_SITE_SNOMED = exports.DEFAULT_ROUTE_SYNONYMS = exports.ROUTE_BY_SNOMED = exports.ROUTE_TEXT = exports.ROUTE_SNOMED = void 0;
 exports.normalizeBodySiteKey = normalizeBodySiteKey;
+exports.normalizePrnReasonKey = normalizePrnReasonKey;
+exports.normalizeAdditionalInstructionKey = normalizeAdditionalInstructionKey;
 const types_1 = require("./types");
 const object_1 = require("./utils/object");
+const SNOMED_SYSTEM = "http://snomed.info/sct";
 const ROUTE_TEXT_OVERRIDES = {
     [types_1.RouteCode["Oral route"]]: "by mouth",
     [types_1.RouteCode["Sublingual route"]]: "sublingual",
@@ -1251,5 +1254,316 @@ exports.DEFAULT_UNIT_BY_ROUTE = (() => {
     ensure(types_1.RouteCode["Otic route"], "drop");
     ensure(types_1.RouteCode["Respiratory tract route (qualifier value)"], "puff");
     ensure(types_1.RouteCode["Transdermal route"], "patch");
+    ensure(types_1.RouteCode["Per rectum"], "suppository");
     return resolved;
 })();
+function normalizePrnReasonKey(value) {
+    return value
+        .trim()
+        .toLowerCase()
+        .replace(/[^\p{L}\p{N}]+/gu, " ")
+        .replace(/\s+/g, " ")
+        .trim();
+}
+function normalizeAdditionalInstructionKey(value) {
+    return value
+        .trim()
+        .toLowerCase()
+        .replace(/[^\p{L}\p{N}]+/gu, " ")
+        .replace(/\s+/g, " ")
+        .trim();
+}
+const DEFAULT_PRN_REASON_SOURCE = [
+    {
+        names: ["pain", "ache", "aches", "pains"],
+        definition: {
+            coding: { system: SNOMED_SYSTEM, code: "22253000", display: "Pain" },
+            text: "Pain"
+        }
+    },
+    {
+        names: ["nausea", "queasiness", "vomiting", "n/v", "nausea and vomiting"],
+        definition: {
+            coding: { system: SNOMED_SYSTEM, code: "422587007", display: "Nausea" },
+            text: "Nausea"
+        }
+    },
+    {
+        names: ["itch", "itching", "itchy"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "418363000",
+                display: "Itching of skin"
+            },
+            text: "Itching"
+        }
+    },
+    {
+        names: ["anxiety", "nervousness"],
+        definition: {
+            coding: { system: SNOMED_SYSTEM, code: "48694002", display: "Anxiety" },
+            text: "Anxiety"
+        }
+    },
+    {
+        names: ["sleep", "sleeping", "insomnia", "sleep issues"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "193462001",
+                display: "Insomnia"
+            },
+            text: "Sleep"
+        }
+    },
+    {
+        names: ["cough", "coughing"],
+        definition: {
+            coding: { system: SNOMED_SYSTEM, code: "49727002", display: "Cough" },
+            text: "Cough"
+        }
+    },
+    {
+        names: ["fever", "temperature", "pyrexia"],
+        definition: {
+            coding: { system: SNOMED_SYSTEM, code: "386661006", display: "Fever" },
+            text: "Fever"
+        }
+    },
+    {
+        names: ["spasm", "spasms", "muscle spasm"],
+        definition: {
+            coding: { system: SNOMED_SYSTEM, code: "45352006", display: "Spasm" },
+            text: "Spasm"
+        }
+    },
+    {
+        names: ["constipation"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "14760008",
+                display: "Constipation"
+            },
+            text: "Constipation"
+        }
+    },
+    {
+        names: ["dyspnea", "shortness of breath", "sob", "breathlessness"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "267036007",
+                display: "Dyspnea"
+            },
+            text: "Shortness of breath"
+        }
+    }
+];
+exports.DEFAULT_PRN_REASON_ENTRIES = DEFAULT_PRN_REASON_SOURCE.map((source) => {
+    var _a, _b, _c;
+    const canonicalTerm = (_c = (_a = source.definition.text) !== null && _a !== void 0 ? _a : (_b = source.definition.coding) === null || _b === void 0 ? void 0 : _b.display) !== null && _c !== void 0 ? _c : source.names[0];
+    return {
+        canonical: normalizePrnReasonKey(canonicalTerm !== null && canonicalTerm !== void 0 ? canonicalTerm : ""),
+        definition: source.definition,
+        terms: [...source.names]
+    };
+});
+exports.DEFAULT_PRN_REASON_DEFINITIONS = (0, object_1.objectFromEntries)(DEFAULT_PRN_REASON_SOURCE.reduce((entries, source) => {
+    for (const name of source.names) {
+        const key = normalizePrnReasonKey(name);
+        if (!key) {
+            continue;
+        }
+        entries.push([key, source.definition]);
+    }
+    if (source.definition.aliases) {
+        for (const alias of source.definition.aliases) {
+            const key = normalizePrnReasonKey(alias);
+            if (!key) {
+                continue;
+            }
+            entries.push([key, source.definition]);
+        }
+    }
+    return entries;
+}, []));
+const DEFAULT_ADDITIONAL_INSTRUCTION_SOURCE = [
+    {
+        names: ["with food", "with meals", "with meal", "after food", "after meals"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "311504000",
+                display: "With or after food"
+            },
+            text: "Take with or after food"
+        }
+    },
+    {
+        names: ["before food", "before meals", "before meal", "1 hour before food"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "311501008",
+                display: "Half to one hour before food"
+            },
+            text: "Take before food"
+        }
+    },
+    {
+        names: ["empty stomach", "on empty stomach"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "717154004",
+                display: "Take on an empty stomach (qualifier value)"
+            },
+            text: "Take on an empty stomach"
+        }
+    },
+    {
+        names: ["with water", "with plenty of water", "drink water", "with lots of water"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "419303009",
+                display: "With plenty of water"
+            },
+            text: "Take with plenty of water"
+        }
+    },
+    {
+        names: ["dissolve in water", "mix with water", "mix in water"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "417995008",
+                display: "Dissolve or mix with water before taking"
+            },
+            text: "Dissolve or mix with water before taking"
+        }
+    },
+    {
+        names: ["avoid alcohol", "no alcohol", "no alc", "avoid alcoholic drink"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "419822006",
+                display: "Warning. Avoid alcoholic drink (qualifier value)"
+            },
+            text: "Avoid alcoholic drinks"
+        }
+    },
+    {
+        names: ["may cause drowsiness", "do not drive", "avoid driving", "no driving", "no drive"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "418954008",
+                display: "Warning. May cause drowsiness. If affected do not drive or operate machinery (qualifier value)"
+            },
+            text: "May cause drowsiness; do not drive if affected"
+        }
+    },
+    {
+        names: [
+            "drowsiness avoid alcohol",
+            "may cause drowsiness avoid alcohol",
+            "do not drive avoid alcohol",
+            "drowsy avoid alc",
+            "drowsy avoid drive",
+            "drowsy avoid driving",
+            "drowsy no drive",
+            "drowsy no driving",
+            "drowsy no alc"
+        ],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "418914006",
+                display: "Warning. May cause drowsiness. If affected do not drive or operate machinery. Avoid alcoholic drink (qualifier value)"
+            },
+            text: "May cause drowsiness; avoid driving or alcohol"
+        }
+    },
+    {
+        names: [
+            "drowsiness next day",
+            "drowsiness next day avoid alcohol",
+            "may cause drowsiness next day",
+            "may next day drowsy",
+            "may drowsy next day"
+        ],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "418071006",
+                display: "Warning. Causes drowsiness which may continue the next day. If affected do not drive or operate machinery. Avoid alcoholic drink (qualifier value)"
+            },
+            text: "May cause next-day drowsiness; avoid driving or alcohol"
+        }
+    },
+    {
+        names: ["avoid sun", "avoid sunlight", "avoid sun lamps"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "418521000",
+                display: "Avoid exposure of skin to direct sunlight or sun lamps (qualifier value)"
+            },
+            text: "Avoid sunlight or sun lamps"
+        }
+    },
+    {
+        names: ["swallow whole", "do not chew", "do not crush", "do not crush or chew", "no chewing"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "418693002",
+                display: "Swallowed whole, not chewed (qualifier value)"
+            },
+            text: "Swallow whole; do not crush or chew"
+        }
+    },
+    {
+        names: ["chew", "chewed", "sucked or chewed", "please chew", "must chew"],
+        definition: {
+            coding: {
+                system: SNOMED_SYSTEM,
+                code: "418991002",
+                display: "Sucked or chewed (qualifier value)"
+            },
+            text: "Suck or chew before swallowing"
+        }
+    }
+];
+exports.DEFAULT_ADDITIONAL_INSTRUCTION_ENTRIES = DEFAULT_ADDITIONAL_INSTRUCTION_SOURCE.map((source) => {
+    var _a, _b, _c;
+    const canonicalTerm = (_c = (_a = source.definition.text) !== null && _a !== void 0 ? _a : (_b = source.definition.coding) === null || _b === void 0 ? void 0 : _b.display) !== null && _c !== void 0 ? _c : source.names[0];
+    return {
+        canonical: normalizeAdditionalInstructionKey(canonicalTerm !== null && canonicalTerm !== void 0 ? canonicalTerm : ""),
+        definition: source.definition,
+        terms: [...source.names]
+    };
+});
+exports.DEFAULT_ADDITIONAL_INSTRUCTION_DEFINITIONS = (0, object_1.objectFromEntries)(DEFAULT_ADDITIONAL_INSTRUCTION_SOURCE.reduce((entries, source) => {
+    for (const name of source.names) {
+        const key = normalizeAdditionalInstructionKey(name);
+        if (!key) {
+            continue;
+        }
+        entries.push([key, source.definition]);
+    }
+    if (source.definition.aliases) {
+        for (const alias of source.definition.aliases) {
+            const key = normalizeAdditionalInstructionKey(alias);
+            if (!key) {
+                continue;
+            }
+            entries.push([key, source.definition]);
+        }
+    }
+    return entries;
+}, []));

package/dist/parser.d.ts

@@ -6,6 +6,8 @@ export declare function parseInternal(input: string, options?: ParseOptions): Pa
  * Resolves parsed site text against SNOMED dictionaries and synchronous
  * callbacks, applying the best match to the in-progress parse result.
  */
+export declare function applyPrnReasonCoding(internal: ParsedSigInternal, options?: ParseOptions): void;
+export declare function applyPrnReasonCodingAsync(internal: ParsedSigInternal, options?: ParseOptions): Promise<void>;
 export declare function applySiteCoding(internal: ParsedSigInternal, options?: ParseOptions): void;
 /**
  * Asynchronous counterpart to {@link applySiteCoding} that awaits resolver and