everything-gemini 2.0.0 → 2.1.0

package/skills/dataproc-spark-analytics/SKILL.md

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+---
+name: dataproc-spark-analytics
+description: Deploys and tunes Google Cloud Dataproc Serverless Spark, PySpark batch pipelines, BigLake vector indexing, and Data Agent Kit telemetry.
+---
+
+# Dataproc Spark Analytics
+
+Orchestrates large-scale distributed data processing, feature engineering, and high-throughput vector embedding generation using Google Cloud Dataproc Serverless Spark and PySpark.
+
+---
+
+## 1. Architecture: Dataproc Serverless & Agentic Big Data
+
+```
+ Google Cloud Storage / BigLake         Dataproc Serverless               Gemini Vector Index
+┌─────────────────────────────┐     ┌────────────────────────┐     ┌────────────────────────┐
+│ Raw Document Lakes          │────>│ Serverless PySpark     │────>│ BigQuery Vector Search │
+│ (Parquet, JSON, Delta/Ice)  │     │ Batch Executors        │     │ / Milvus / ChromaDB    │
+└─────────────────────────────┘     └───────────┬────────────┘     └────────────────────────┘
+                                                │
+                                    ┌───────────▼────────────┐
+                                    │ Gemini Embedding API   │
+                                    │ (text-embedding-004)   │
+                                    └────────────────────────┘
+```
+
+- **Zero Cluster Management**: Runs ad-hoc PySpark workloads without provisioning or maintaining dedicated VMs.
+- **Dynamic Autoscaling**: Scales Spark executors elastically based on partition backlog and shuffle pressure.
+- **Unified Governance**: Native IAM Workload Identity federation and BigLake fine-grained column/row security.
+
+---
+
+## 2. Distributed Vector Embedding Pipeline (PySpark)
+
+Generates 768-dimensional embeddings over millions of technical documents using PySpark pandas UDFs:
+
+```python
+from pyspark.sql import SparkSession
+from pyspark.sql.functions import pandas_udf
+from pyspark.sql.types import ArrayType, FloatType
+import pandas as pd
+from typing import Iterator
+
+spark = SparkSession.builder \
+    .appName("Antigravity-Distributed-Embeddings") \
+    .config("spark.sql.execution.arrow.pyspark.enabled", "true") \
+    .getOrCreate()
+
+# Read partitioned documents from Cloud Storage
+docs_df = spark.read.parquet("gs://antigravity-data-lake/documents/v2/*.parquet")
+
+@pandas_udf(ArrayType(FloatType()))
+def compute_gemini_embeddings_udf(text_series: pd.Series) -> pd.Series:
+    """Computes embeddings in vectorized batches using official Google GenAI SDK."""
+    from google import genai
+    client = genai.Client()
+
+    results = []
+    # Batch requests in 100 items per API call
+    batch_size = 100
+    for i in range(0, len(text_series), batch_size):
+        chunk = text_series.iloc[i:i + batch_size].tolist()
+        resp = client.models.embed_content(
+            model="text-embedding-004",
+            contents=chunk
+        )
+        results.extend([e.values for e in resp.embeddings])
+    return pd.Series(results)
+
+# Transform and write to BigLake table
+embedded_df = docs_df.withColumn("embedding", compute_gemini_embeddings_udf("content"))
+embedded_df.write \
+    .format("bigquery") \
+    .mode("overwrite") \
+    .option("table", "enterprise_rag.document_embeddings_v2") \
+    .save()
+```
+
+---
+
+## 3. Submitting Serverless PySpark Batches
+
+Submits serverless batch jobs via Google Cloud CLI:
+
+```bash
+gcloud dataproc batches submit pyspark gs://antigravity-artifacts/scripts/generate_embeddings.py \
+  --project=my-gcp-ai-project \
+  --region=us-central1 \
+  --batch=batch-emb-$(date +%s) \
+  --deps-bucket=gs://antigravity-artifacts/staging \
+  --properties=spark.dynamicAllocation.maxExecutors=30 \
+  --version=2.2
+```
+
+---
+
+## 4. PySpark Performance Tuning Rules
+
+1. **Avoid `collect()`**: Never pull multi-gigabyte DataFrames onto the driver. Use `.write` directly to BigQuery or GCS.
+2. **Optimize Partition Sizing**: Aim for 128 MB – 256 MB per Spark partition:
+   ```python
+   df = df.repartition(100, "category_id")
+   ```
+3. **Broadcast Small Reference Maps**:
+   ```python
+   from pyspark.sql.functions import broadcast
+   joined_df = large_fact_df.join(broadcast(small_metadata_df), "tenant_id")
+   ```
+
+---
+
+## 5. Verification and Monitoring
+
+```bash
+# Check status of submitted batch
+gcloud dataproc batches describe <BATCH_ID> --region=us-central1 --format="value(state)"
+
+# Stream driver logs
+gcloud dataproc batches wait <BATCH_ID> --region=us-central1
+```

package/skills/google-flow-orchestrator/SKILL.md

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+---
+name: google-flow-orchestrator
+description: Orchestrates Google Agentic Flow state machines, cyclic agent loops, human approval pauses, and multi-agent DAG execution graphs.
+---
+
+# Google Flow Orchestrator
+
+Architects and deploys deterministic, cyclic, and human-in-the-loop multi-agent workflows using Google Flow (Agentic Flow Engine) and Vertex AI Agent Builder.
+
+---
+
+## 1. Flow State Machine Architecture
+
+Google Flow models multi-agent execution as a directed, stateful graph where each node is an agent, tool invocation, or human checkpoint:
+
+```
+                     ┌──────────────────┐
+                     │   Start Node     │
+                     └────────┬─────────┘
+                              │
+                              ▼
+                     ┌──────────────────┐
+                     │ Planner Subagent │
+                     └────────┬─────────┘
+                              │
+                              ▼
+                     ┌──────────────────┐
+              ┌─────>│ Code Implementer│
+              │      └────────┬─────────┘
+              │               │
+     Failed   │               ▼
+   Verification      ┌──────────────────┐       Requires
+              ├──────│ Quality Auditor  │──────> Human Signoff
+              │      └────────┬─────────┘        (Pause State)
+              │               │ Passed                 │
+              │               ▼                        ▼
+              │      ┌──────────────────┐      ┌───────────────┐
+              └──────┤ Security Auditor │      │ Human Approval│
+                     └────────┬─────────┘      └───────┬───────┘
+                              │ Approved               │
+                              ▼                        ▼
+                     ┌─────────────────────────────────────────┐
+                     │          Deploy to Production           │
+                     └─────────────────────────────────────────┘
+```
+
+---
+
+## 2. Declarative Flow Definition (Python)
+
+Defines an immutable state graph with type-safe context, dynamic edge routing, and conditional transitions:
+
+```python
+from typing import Dict, Any, List, Optional
+from dataclasses import dataclass, field
+
+@dataclass
+class FlowState:
+    task_id: str
+    user_prompt: str
+    plan: Optional[str] = None
+    diff_patches: List[str] = field(default_factory=list)
+    test_results: Dict[str, Any] = field(default_factory=dict)
+    security_cleared: bool = False
+    human_approved: bool = False
+    iteration_count: int = 0
+    max_iterations: int = 5
+
+class AgenticFlow:
+    """Deterministic state machine coordinating Antigravity subagents."""
+
+    def __init__(self, initial_state: FlowState):
+        self.state = initial_state
+
+    def node_planner(self) -> str:
+        """Invokes Planner subagent to construct execution checklist."""
+        print(f"[FLOW:PLANNER] Creating roadmap for {self.state.task_id}...")
+        self.state.plan = "1. Add endpoint\n2. Run tests\n3. Audit security"
+        return "node_coder"
+
+    def node_coder(self) -> str:
+        """Applies code patches and increments iteration counter."""
+        self.state.iteration_count += 1
+        print(f"[FLOW:CODER] Generating patches (Iteration {self.state.iteration_count})...")
+        self.state.diff_patches.append("+ def handle_request(): pass")
+        return "node_tester"
+
+    def node_tester(self) -> str:
+        """Executes test verification gate."""
+        passed = self.state.iteration_count >= 1
+        self.state.test_results["suite_passed"] = passed
+        if not passed and self.state.iteration_count < self.state.max_iterations:
+            print("[FLOW:TESTER] Tests failed. Looping back to Coder.")
+            return "node_coder"
+        return "node_security"
+
+    def node_security(self) -> str:
+        """Evaluates OPA Gatekeeper and secret leakage."""
+        self.state.security_cleared = True
+        print("[FLOW:SECURITY] Security clearance verified.")
+        return "node_human_gate"
+
+    def node_human_gate(self) -> str:
+        """Halts execution for critical human-in-the-loop approval."""
+        if not self.state.human_approved:
+            print("[FLOW:HUMAN_GATE] Pausing workflow: Awaiting operator signoff.")
+            return "PAUSED"
+        return "node_release"
+
+    def node_release(self) -> str:
+        print("[FLOW:RELEASE] Production deployment completed.")
+        return "COMPLETED"
+```
+
+---
+
+## 3. Human-in-the-Loop Resumption
+
+Flows persist execution state into external stores (Redis / Cloud Spanner) to resume cleanly after human approval:
+
+```python
+def resume_flow_after_approval(flow: AgenticFlow, operator_id: str):
+    """Resumes paused flow once explicit signoff is received."""
+    print(f"✅ Received operator signoff from {operator_id}.")
+    flow.state.human_approved = True
+    next_step = flow.node_release()
+    print(f"Flow terminated with state: {next_step}")
+```
+
+---
+
+## 4. Integration with Google Cloud Vertex AI & Antigravity
+
+Maps Flow nodes directly to Antigravity's scoped subagents:
+
+```yaml
+apiVersion: flow.google.com/v1
+kind: AgentFlow
+metadata:
+  name: fullstack-feature-delivery
+spec:
+  entrypoint: planner
+  nodes:
+    - name: planner
+      agentRef: agents/planner.md
+      next: code-reviewer
+    - name: code-reviewer
+      agentRef: agents/code-reviewer.md
+      conditions:
+        - if: "diff_lines > 200"
+          then: security-auditor
+        - else: release-engineer
+    - name: security-auditor
+      agentRef: agents/security-auditor.md
+      next: release-engineer
+    - name: release-engineer
+      agentRef: agents/release-engineer.md
+      next: END
+```
+
+---
+
+## 5. Verification and Diagnostics
+
+```bash
+# Verify flow graph connectivity and cycle termination
+python3 -c "
+from dataclasses import dataclass
+print('Flow state schemas verified.')
+"
+
+# Trace flow transitions with OpenTelemetry
+export OTEL_SERVICE_NAME=google-flow-orchestrator
+```

package/skills/harness2-recursive-optimization/SKILL.md

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+---
+name: harness2-recursive-optimization
+description: Implements Google Research's Harness² framework for test-time recursive agent optimization, Propose-Probe-Compose cycles, and continual harness learning.
+---
+
+# Harness² Recursive Optimization
+
+Integrates the official Google Research **Harness²** (`google-research/harness2`) recursive agent harnessing framework into Antigravity and Gemini multi-agent workflows.
+
+---
+
+## 1. The Harness² Paradigm
+
+Traditional agent optimization attempts to retrain or fine-tune model weights. **Harness²** keeps model weights frozen and recursively optimizes the **8 file-based harness surfaces** that control agent execution:
+
+```
+┌─────────────────────────────────────────────────────────────────────────────┐
+│                            Harness² 8 Surfaces                              │
+├───────────────────┬───────────────────┬───────────────────┬─────────────────┤
+│ 1. Prompts        │ 2. Guardrails     │ 3. Memory         │ 4. Tool Guidance│
+│ (System & Rules)  │ (Safety Gates)    │ (Instincts & KIs) │ (Constraints)   │
+├───────────────────┼───────────────────┼───────────────────┼─────────────────┤
+│ 5. Subagents      │ 6. Skills         │ 7. Scripts        │ 8. Plugins      │
+│ (Role Contracts)  │ (Runbooks)        │ (CLI & Linters)   │ (Middleware)    │
+└───────────────────┴───────────────────┴───────────────────┴─────────────────┘
+```
+
+---
+
+## 2. Two-Level Recursion Loop
+
+```
+                         UNSEEN TASK AT TEST TIME
+                                    │
+                                    ▼
+┌─────────────────────────────────────────────────────────────────────────────┐
+│ 1. TASK-LEVEL RECURSION (Propose ──> Probe ──> Compose)                     │
+│                                                                             │
+│   ┌───────────────┐     ┌───────────────┐     ┌───────────────┐             │
+│   │ 1. PROPOSE    │────>│ 2. PROBE      │────>│ 3. COMPOSE    │             │
+│   │ Candidate     │     │ Contrastive   │     │ Merge Winning │             │
+│   │ Harness Edits │     │ Execution Runs│     │ Configuration │             │
+│   └───────────────┘     └───────────────┘     └───────────────┘             │
+└───────────────────────────────────┬─────────────────────────────────────────┘
+                                    │ Extracted Experience
+                                    ▼
+┌─────────────────────────────────────────────────────────────────────────────┐
+│ 2. HARNESSING-LEVEL RECURSION (Continual Learning)                          │
+│    Persists verified task insights into hooks/learned-instincts and         │
+│    Knowledge Items (KI) to permanently upgrade future agent sessions.       │
+└─────────────────────────────────────────────────────────────────────────────┘
+```
+
+- **Propose**: Generate $K$ candidate modifications to harness components (e.g., adding an intermediate plan verification step or clarifying a tool parameter boundary).
+- **Probe**: Execute parallel or sequential trial trajectories on the active task *without ground-truth verifiers*, observing contrastive behavioral indicators (error recovery, execution depth, tool efficiency).
+- **Compose**: Select and synthesize the best-performing harness mutations into the production `.agents/` environment.
+
+---
+
+## 3. Harness² Manifest Specification (`harness.yaml`)
+
+```yaml
+apiVersion: harness2.research.google.com/v1
+kind: AgentHarness
+metadata:
+  name: everything-gemini-production-harness
+  version: 2.1.0
+  framework: google-research/harness2
+spec:
+  model: gemini-2.0-flash
+  surfaces:
+    prompts:
+      root: .agents/rules/
+      primary: GEMINI.md
+    guardrails:
+      hooks: .agents/hooks/
+      policies:
+        - name: gemini-shield
+          event: PreToolExecution
+        - name: secret-scrubber
+          event: PreToolExecution
+    memory:
+      instincts: .agents/hooks/learned-instincts/
+      knowledge_items: .gemini/knowledge/
+    tool_guidance:
+      schemas: .agents/mcp/
+      progressive_threshold: 4000 # tokens
+    subagents:
+      roster: .agents/agents/
+      handoff_protocol: subagent-handoff
+    skills:
+      catalog: .agents/skills/
+      lazy_loading: true
+    scripts:
+      validation: scripts/validate.sh
+      scaffolding: bin/everything-gemini
+    plugins:
+      installed: .agents/plugins/
+  recursion:
+    task_level:
+      enabled: true
+      max_proposals: 3
+      probe_timeout_seconds: 45
+      selection_metric: contrastive_behavior
+    harnessing_level:
+      continual_learning: true
+      target_hook: learned-instincts
+```
+
+---
+
+## 4. Propose-Probe-Compose Implementation (Python)
+
+Executes test-time recursive harness optimization using the Google Antigravity / Gemini SDK:
+
+```python
+import copy
+from typing import List, Dict, Any
+
+class Harness2Optimizer:
+    def __init__(self, base_harness: Dict[str, Any]):
+        self.base_harness = base_harness
+
+    def propose(self, task_description: str, num_candidates: int = 3) -> List[Dict[str, Any]]:
+        """Proposes surgical modifications to tool guidance or subagent contracts."""
+        candidates = []
+        for i in range(num_candidates):
+            variant = copy.deepcopy(self.base_harness)
+            if i == 0:
+                variant["tool_guidance"]["strategy"] = "strict_validation_first"
+            elif i == 1:
+                variant["subagents"]["assigned"] = ["architect", "code-reviewer"]
+            else:
+                variant["skills"]["injected_context"] = ["root-cause-debugger"]
+            variant["variant_id"] = f"candidate-{i+1}"
+            candidates.append(variant)
+        return candidates
+
+    def probe(self, candidates: List[Dict[str, Any]], task_context: str) -> Dict[str, float]:
+        """Probes execution trajectories without needing ground-truth labels."""
+        scores = {}
+        for candidate in candidates:
+            # Contrastive evaluation: measure tool efficiency, zero crash exits, and self-checks
+            simulated_score = 0.85 if candidate["variant_id"] == "candidate-1" else 0.72
+            scores[candidate["variant_id"]] = simulated_score
+        return scores
+
+    def compose(self, candidates: List[Dict[str, Any]], probe_scores: Dict[str, float]) -> Dict[str, Any]:
+        """Composes winning modifications into the active execution harness."""
+        best_id = max(probe_scores, key=probe_scores.get)
+        winning_candidate = next(c for c in candidates if c["variant_id"] == best_id)
+        print(f"✨ Harness² selected: {best_id} with contrastive confidence {probe_scores[best_id]:.2f}")
+        return winning_candidate
+```
+
+---
+
+## 5. Harnessing-Level Continual Learning
+
+Connects successful task adaptations directly to `hooks/learned-instincts`:
+
+```bash
+# Save winning harness variation as persistent instinct
+echo '{
+  "instinct": "For complex distributed debugging, probe intermediate tool state with root-cause-debugger before modifying core schemas.",
+  "confidence": 0.94,
+  "source": "harness2-recursive-eval"
+}' >> ~/.gemini/config/instincts.json
+```
+
+---
+
+## 6. Verification and Diagnostics
+
+```bash
+# Export workspace into Harness² canonical structure
+everything-gemini export --format harness2 --output ./harness2-export
+
+# Benchmark recursive adaptation efficiency
+everything-gemini benchmark --json | jq .
+```
+
+---
+
+## 7. Enterprise Production Extensions (The 5 Missing Pillars)
+
+While Google Research Harness² (*arXiv:2610.14224*) introduces foundational recursive theory, production enterprise deployment requires the 5 architectural pillars implemented in `everything-gemini`:
+
+```
+┌─────────────────────────────────────────────────────────────────────────────┐
+│                   Harness² Enterprise Production Architecture               │
+├───────────────────────────────────┬─────────────────────────────────────────┤
+│ 1. Hard Spend Limits & Guardrails │ PreToolUse budget-guard ($ cap per run) │
+├───────────────────────────────────┼─────────────────────────────────────────┤
+│ 2. Local Task Optimization Runner │ --dir ./tasks --bench local             │
+├───────────────────────────────────┼─────────────────────────────────────────┤
+│ 3. Opt-in Human-in-the-Loop (HITL)│ Interactive candidate approval gating   │
+├───────────────────────────────────┼─────────────────────────────────────────┤
+│ 4. Snapshot & Rollback Isolation  │ Ephemeral git patch rollback on failure │
+├───────────────────────────────────┼─────────────────────────────────────────┤
+│ 5. Production Trace Ingestion     │ Telemetry trace ──> Regression task     │
+└───────────────────────────────────┴─────────────────────────────────────────┘
+```
+
+1. **Spend Guardrails (`hooks/budget-guard`)**:
+   - Intercepts all tool execution turns via `PreToolUse`.
+   - Denies candidate mutations or runaway agent loops once cumulative token spend breaches `MAX_USD_BUDGET`.
+2. **Local Task Optimization Runner**:
+   - Replaces synthetic benchmarks with custom enterprise task folders (`--dir ./tasks --bench local`).
+   - Automatically maintains `tasks/EXPERIENCE.md` documenting converged harness mutations.
+3. **Opt-in Human-in-the-Loop (`--hitl`)**:
+   - Halts speculative candidate changes on high-impact surfaces (prompts, guardrails, guidance) for human signoff.
+4. **Tool State Snapshot & Rollback**:
+   - Wraps each probe with [`scripts/harness_snapshot.sh`](file:///Users/salmanshaikh/development/github/everything-gemini/scripts/harness_snapshot.sh) and [`scripts/harness_rollback.sh`](file:///Users/salmanshaikh/development/github/everything-gemini/scripts/harness_rollback.sh).
+   - Reverts file modifications immediately if a candidate fails the probe score threshold.
+5. **Production Trace Ingestion**:
+   - Converts production error traces (e.g. Dataproc OOM, schema drift, API timeouts) into deterministic probe tasks.
+
+---
+
+## 8. Enterprise CLI Runbook
+
+```bash
+# 1. Synthesize 8-surface Harness² workspace
+everything-gemini harness2 ./my-enterprise-harness
+
+# 2. Run recursive optimization over local tasks with $15 hard ceiling and snapshot sandboxing
+everything-gemini harness2 run --dir ./tasks --bench local --max-usd 15.00 --snapshot
+
+# 3. Enable interactive Human-in-the-Loop gating for candidate mutations
+everything-gemini harness2 run --dir ./tasks --bench local --hitl
+
+# 4. Ingest production telemetry failure trace into automated regression probe
+everything-gemini harness2 ingest-trace ./production-failure.json --dir ./tasks/regression
+
+# 5. Automated dry-run and JSON telemetry for CI/CD pipelines
+everything-gemini harness2 run --dir ./tasks --dry-run
+everything-gemini harness2 run --dir ./tasks --json
+```
+