edfcore 0.6.21 → 0.6.23

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (13) hide show
  1. package/dist/cli-run.d.ts.map +1 -1
  2. package/dist/cli-run.js +29 -0
  3. package/dist/cli-run.js.map +1 -1
  4. package/dist/constants.d.ts +1 -1
  5. package/dist/constants.js +1 -1
  6. package/dist/format-header.d.ts.map +1 -1
  7. package/dist/format-header.js +28 -1
  8. package/dist/format-header.js.map +1 -1
  9. package/docs/CHANGELOG.md +42 -0
  10. package/package.json +1 -1
  11. package/src/cli-run.ts +29 -0
  12. package/src/constants.ts +1 -1
  13. package/src/format-header.ts +26 -1
package/dist/cli-run.d.ts.map CHANGED
@@ -1 +1 @@
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- {"version":3,"file":"cli-run.d.ts","sourceRoot":"","sources":["../src/cli-run.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAgBH;;;;;;;;;;;GAWG;AACH,qBAAa,aAAc,SAAQ,UAAU;IAC3C,QAAQ,CAAC,KAAK,EAAG,IAAI,CAAU;gBAEnB,OAAO,EAAE,MAAM;CAI5B;AAED,iDAAiD;AACjD,MAAM,WAAW,KAAK;IACpB,QAAQ,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,CAAC,CAAC;IAC5C,GAAG,CAAC,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,GAAG,CAAC,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;CACzB;AA4CD;;;;GAIG;AACH,MAAM,WAAW,IAAI;IACnB,QAAQ,CAAC,OAAO,EAAE,MAAM,GAAG,SAAS,CAAC;IACrC,QAAQ,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,CAAC;IAClC,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,QAAQ,CAAC,IAAI,EAAE,OAAO,CAAC;IACvB,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,QAAQ,CAAC,IAAI,EAAE,OAAO,CAAC;IACvB,QAAQ,CAAC,KAAK,EAAE,MAAM,GAAG,SAAS,CAAC;CACpC;AAED;;;;GAIG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,SAAS,MAAM,EAAE,GAAG,IAAI,CAkDvD;AAoCD;;;;GAIG;AACH,wBAAsB,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,EAAE,EAAE,KAAK,GAAG,OAAO,CAAC,MAAM,CAAC,CA4VnE"}
1
+ {"version":3,"file":"cli-run.d.ts","sourceRoot":"","sources":["../src/cli-run.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAgBH;;;;;;;;;;;GAWG;AACH,qBAAa,aAAc,SAAQ,UAAU;IAC3C,QAAQ,CAAC,KAAK,EAAG,IAAI,CAAU;gBAEnB,OAAO,EAAE,MAAM;CAI5B;AAED,iDAAiD;AACjD,MAAM,WAAW,KAAK;IACpB,QAAQ,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,CAAC,CAAC;IAC5C,GAAG,CAAC,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,GAAG,CAAC,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;CACzB;AA4CD;;;;GAIG;AACH,MAAM,WAAW,IAAI;IACnB,QAAQ,CAAC,OAAO,EAAE,MAAM,GAAG,SAAS,CAAC;IACrC,QAAQ,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,CAAC;IAClC,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,QAAQ,CAAC,IAAI,EAAE,OAAO,CAAC;IACvB,QAAQ,CAAC,OAAO,EAAE,OAAO,CAAC;IAC1B,QAAQ,CAAC,IAAI,EAAE,OAAO,CAAC;IACvB,QAAQ,CAAC,KAAK,EAAE,MAAM,GAAG,SAAS,CAAC;CACpC;AAED;;;;GAIG;AACH,wBAAgB,SAAS,CAAC,IAAI,EAAE,SAAS,MAAM,EAAE,GAAG,IAAI,CAkDvD;AAoCD;;;;GAIG;AACH,wBAAsB,MAAM,CAAC,IAAI,EAAE,IAAI,EAAE,EAAE,EAAE,KAAK,GAAG,OAAO,CAAC,MAAM,CAAC,CAyXnE"}
package/dist/cli-run.js CHANGED
@@ -434,6 +434,18 @@ export async function runCli(args, io) {
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  recording: trimEdfField(header.recording.raw),
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  }
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  : {}),
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+ /*
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+ * The four declared range numbers and the derived gain, which is what makes this
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+ * output enough to act on rather than only enough to read. Without them a script has
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+ * the samples' units and no way to reach the units: `toPhysical` needs the scale, and
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+ * `edfcore header` shows the range to a human while this showed a script nothing.
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+ *
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+ * `scale` is absent rather than null when the header has no usable gain — a degenerate
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+ * or inverted range, or the `Filtered` dimension — which is the same convention
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+ * `sampleRateHz` already uses here for the legal zero-duration file. An absent key is
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+ * the honest shape: `JSON.stringify` drops `undefined`, and a reader who checks for
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+ * the key gets the same answer the library gives, which is that there is no gain.
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+ */
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  signals: header.signals.map((signal) => ({
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  index: signal.index,
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  label: signal.label,
@@ -441,6 +453,11 @@ export async function runCli(args, io) {
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  samplesPerRecord: signal.samplesPerRecord,
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  sampleRateHz: signal.sampleRateHz,
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  physicalDimension: signal.physicalDimension,
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+ physicalMinimum: signal.physicalMinimum,
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+ physicalMaximum: signal.physicalMaximum,
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+ digitalMinimum: signal.digitalMinimum,
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+ digitalMaximum: signal.digitalMaximum,
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+ scale: signal.scale,
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  })),
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  /*
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  * The probe's findings too, which is the fix 0.3.94 made to `edfcore header` and did
@@ -459,15 +476,27 @@ export async function runCli(args, io) {
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  * own heading. One array, because a consumer filtering by severity wants one array.
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  */
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  diagnostics: [
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+ /*
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+ * `signalIndex` too, absent when the diagnostic is about the file rather than a
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+ * channel. A real file earns one code many times — `chb01_01.edf` reports
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+ * LABEL_CONVENTION_NONCONFORMANT twenty-three times, once per channel — and without
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+ * the index a script could count them and not name one.
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+ *
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+ * A number, not the field's bytes: `json-command-privacy.test.ts` holds the line
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+ * that this command emits no diagnostic text, because an identification diagnostic
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+ * quotes the name it is complaining about.
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+ */
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  ...header.diagnostics.map((d) => ({
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  code: d.code,
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  severity: d.severity,
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  source: 'header',
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+ signalIndex: d.signalIndex,
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  })),
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  ...recording.timeline.diagnostics.map((d) => ({
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  code: d.code,
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  severity: d.severity,
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  source: 'recordProbe',
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+ signalIndex: d.signalIndex,
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  })),
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  ],
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  }, null, 2)}\n`);
package/dist/cli-run.js.map CHANGED
@@ -1 +1 @@
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package/dist/constants.d.ts CHANGED
@@ -109,5 +109,5 @@ export declare const SIGNAL_FIELD_BLOCK_OFFSETS: {
109
109
  readonly reserved: 224;
110
110
  };
111
111
  /** Published package version. Kept in sync with package.json by a test. */
112
- export declare const VERSION = "0.6.21";
112
+ export declare const VERSION = "0.6.23";
113
113
  //# sourceMappingURL=constants.d.ts.map
package/dist/constants.js CHANGED
@@ -79,5 +79,5 @@ export const SIGNAL_FIELD_BLOCK_OFFSETS = {
79
79
  reserved: 224,
80
80
  };
81
81
  /** Published package version. Kept in sync with package.json by a test. */
82
- export const VERSION = '0.6.21';
82
+ export const VERSION = '0.6.23';
83
83
  //# sourceMappingURL=constants.js.map
package/dist/format-header.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"format-header.d.ts","sourceRoot":"","sources":["../src/format-header.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAQH,OAAO,KAAK,EAAmB,SAAS,EAAE,mBAAmB,EAAE,MAAM,YAAY,CAAC;AA6ClF;;;;;;GAMG;AACH,wBAAgB,YAAY,CAAC,MAAM,EAAE,SAAS,EAAE,OAAO,CAAC,EAAE,mBAAmB,GAAG,MAAM,CA+HrF"}
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+ {"version":3,"file":"format-header.d.ts","sourceRoot":"","sources":["../src/format-header.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAQH,OAAO,KAAK,EAAmB,SAAS,EAAE,mBAAmB,EAAE,MAAM,YAAY,CAAC;AAsElF;;;;;;GAMG;AACH,wBAAgB,YAAY,CAAC,MAAM,EAAE,SAAS,EAAE,OAAO,CAAC,EAAE,mBAAmB,GAAG,MAAM,CA+HrF"}
package/dist/format-header.js CHANGED
@@ -53,9 +53,36 @@ function dimensionSuffix(signal) {
53
53
  const dimension = printable(signal.physicalDimension);
54
54
  return dimension === '' ? '' : ` ${dimension}`;
55
55
  }
56
+ /**
57
+ * The rate for the table, rounded when the exact value would not fit in a column.
58
+ *
59
+ * `sampleRateHz` is `samplesPerRecord / recordDurationSeconds`, and that division does not have to
60
+ * come out. A 0.29 s record holding 20 samples is 68.96551724137932 Hz, and interpolating it raw
61
+ * put seventeen digits into a nine-character column — pushing `range` off its position on that row
62
+ * alone, which is the alignment `formatHeader` was fixed for once already in 0.3.96, arriving by a
63
+ * different route. It also stated a derived quotient to the last bit of a float64, in a table whose
64
+ * other numbers are what the file says.
65
+ *
66
+ * `~` rather than a silently rounded number, because this module promises never to invent a value.
67
+ * The exact rate is on `signal.sampleRateHz`, `edfcore signals` prints it unrounded for scripts,
68
+ * and `samplesPerRecord` is the authoritative field either way — `cli.md` says to index by that and
69
+ * never by the rate.
70
+ *
71
+ * A rate whose exact spelling already fits is printed exactly, so the ordinary file is unchanged
72
+ * and the tilde means something when it appears. A rate too small to survive two decimal places
73
+ * falls back to the exact value rather than printing `~0 Hz`, which would be a claim rather than a
74
+ * rounding.
75
+ */
56
76
  function formatRate(signal) {
77
+ const rate = signal.sampleRateHz;
57
78
  // undefined is the honest answer for a zero record duration, which is legal EDF.
58
- return signal.sampleRateHz === undefined ? '—' : `${signal.sampleRateHz} Hz`;
79
+ if (rate === undefined)
80
+ return '—';
81
+ const exact = `${rate}`;
82
+ if (exact.length <= 6)
83
+ return `${exact} Hz`;
84
+ const rounded = Number(rate.toFixed(2));
85
+ return rounded === 0 ? `${exact} Hz` : `~${rounded} Hz`;
59
86
  }
60
87
  /**
61
88
  * A multi-line summary of a header.
package/dist/format-header.js.map CHANGED
@@ -1 +1 @@
1
- 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1
+ 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package/docs/CHANGELOG.md CHANGED
@@ -6,6 +6,48 @@ alone does not tell you whether you were affected.
6
6
  edfcore is pre-1.0. Patch releases have carried behaviour changes where the old behaviour was a
7
7
  defect; those are called out below.
8
8
 
9
+ ## 0.6.23
10
+
11
+ - **Fixed** a derived sample rate blowing the column it is printed in. `sampleRateHz` is
12
+ `samplesPerRecord / recordDurationSeconds` and that division does not have to come out: a 0.29 s
13
+ record holding 20 samples is 68.96551724137932 Hz, seventeen digits in a nine-character column.
14
+ `edfcore header` printed it raw, so `range` moved off its position on that row and no other, and
15
+ a reader comparing two rows found the last column of one of them somewhere else.
16
+ - It is the defect 0.3.96 fixed for the heading, arriving by a different route: that one was a
17
+ hand-spaced literal disagreeing with the widths beneath it, this one is a value wider than the
18
+ width. Both make the same table unreadable in the same place.
19
+ - A rate whose exact spelling fits is printed exactly, so the ordinary file is unchanged. One that
20
+ does not is rounded to two decimals and marked `~`, because this module promises never to invent
21
+ a value — and a rate too small to survive two decimals falls back to the exact spelling rather
22
+ than printing `~0 Hz`, which would be a claim rather than a rounding.
23
+ - Nothing a script reads moved. `signal.sampleRateHz` is untouched, `edfcore signals` prints it
24
+ unrounded, `edfcore json` carries it in full, and `samplesPerRecord` is the authoritative field
25
+ either way. A table for a person is the one place four significant figures beat seventeen.
26
+ - `a-rate-that-does-not-divide.test.ts` checks the property rather than the site: every row's
27
+ `range` starts at the same column as every other row's and as the heading's, over all thirteen
28
+ shapes. The matrix only reaches this because 0.6.20 put a 0.29 s record in it — before that every
29
+ shape had a duration of 1 s or 0 s, and every rate was a whole number.
30
+
31
+ ## 0.6.22
32
+
33
+ - **Added** the four declared range numbers and `scale` to each signal in `edfcore json`, so the
34
+ document is enough to reach physical units on its own. It emitted `physicalDimension` and nothing
35
+ that gets you to it: a reader learned the samples were microvolts and had no gain to apply, and
36
+ the one thing a script most wants from a header — turn these stored integers into the units the
37
+ file names — needed a second tool. `edfcore header` printed the range to a person the whole time.
38
+ - `scale` is absent rather than null when the header has no usable gain — a degenerate or inverted
39
+ range, or the `Filtered` dimension. That is the convention `sampleRateHz` already uses here for
40
+ the legal zero-duration file, and it is the honest shape: `JSON.stringify` drops `undefined`, and
41
+ a reader checking for the key gets the answer the library gives, which is that there is none.
42
+ - **Added** `signalIndex` to each diagnostic, where the library has one. A real file earns one code
43
+ many times — `chb01_01.edf` reports `LABEL_CONVENTION_NONCONFORMANT` twenty-three times, once per
44
+ channel — so a script could count them and not name one. A number, not the field's bytes: this
45
+ command still emits no diagnostic text, because an identification diagnostic quotes the name it
46
+ is complaining about.
47
+ - `json-is-enough-to-convert.test.ts` proves the claim rather than the keys: it converts a record
48
+ using only the numbers in the document, in EDFlib's exact expression, and compares the result
49
+ with `toPhysical` on the same samples.
50
+
9
51
  ## 0.6.21
10
52
 
11
53
  - **Added** the check that calling twice gives the same answer. Every function in the reading API is
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "edfcore",
3
- "version": "0.6.21",
3
+ "version": "0.6.23",
4
4
  "description": "Modern, typed, zero-dependency reader for EDF, EDF+, BDF and BDF+ biosignal files. Works in browsers and Node with true random access.",
5
5
  "keywords": [
6
6
  "edf",
package/src/cli-run.ts CHANGED
@@ -500,6 +500,18 @@ export async function runCli(args: Args, io: CliIo): Promise<number> {
500
500
  recording: trimEdfField(header.recording.raw),
501
501
  }
502
502
  : {}),
503
+ /*
504
+ * The four declared range numbers and the derived gain, which is what makes this
505
+ * output enough to act on rather than only enough to read. Without them a script has
506
+ * the samples' units and no way to reach the units: `toPhysical` needs the scale, and
507
+ * `edfcore header` shows the range to a human while this showed a script nothing.
508
+ *
509
+ * `scale` is absent rather than null when the header has no usable gain — a degenerate
510
+ * or inverted range, or the `Filtered` dimension — which is the same convention
511
+ * `sampleRateHz` already uses here for the legal zero-duration file. An absent key is
512
+ * the honest shape: `JSON.stringify` drops `undefined`, and a reader who checks for
513
+ * the key gets the same answer the library gives, which is that there is no gain.
514
+ */
503
515
  signals: header.signals.map((signal) => ({
504
516
  index: signal.index,
505
517
  label: signal.label,
@@ -507,6 +519,11 @@ export async function runCli(args: Args, io: CliIo): Promise<number> {
507
519
  samplesPerRecord: signal.samplesPerRecord,
508
520
  sampleRateHz: signal.sampleRateHz,
509
521
  physicalDimension: signal.physicalDimension,
522
+ physicalMinimum: signal.physicalMinimum,
523
+ physicalMaximum: signal.physicalMaximum,
524
+ digitalMinimum: signal.digitalMinimum,
525
+ digitalMaximum: signal.digitalMaximum,
526
+ scale: signal.scale,
510
527
  })),
511
528
  /*
512
529
  * The probe's findings too, which is the fix 0.3.94 made to `edfcore header` and did
@@ -525,15 +542,27 @@ export async function runCli(args: Args, io: CliIo): Promise<number> {
525
542
  * own heading. One array, because a consumer filtering by severity wants one array.
526
543
  */
527
544
  diagnostics: [
545
+ /*
546
+ * `signalIndex` too, absent when the diagnostic is about the file rather than a
547
+ * channel. A real file earns one code many times — `chb01_01.edf` reports
548
+ * LABEL_CONVENTION_NONCONFORMANT twenty-three times, once per channel — and without
549
+ * the index a script could count them and not name one.
550
+ *
551
+ * A number, not the field's bytes: `json-command-privacy.test.ts` holds the line
552
+ * that this command emits no diagnostic text, because an identification diagnostic
553
+ * quotes the name it is complaining about.
554
+ */
528
555
  ...header.diagnostics.map((d) => ({
529
556
  code: d.code,
530
557
  severity: d.severity,
531
558
  source: 'header' as const,
559
+ signalIndex: d.signalIndex,
532
560
  })),
533
561
  ...recording.timeline.diagnostics.map((d) => ({
534
562
  code: d.code,
535
563
  severity: d.severity,
536
564
  source: 'recordProbe' as const,
565
+ signalIndex: d.signalIndex,
537
566
  })),
538
567
  ],
539
568
  },
package/src/constants.ts CHANGED
@@ -93,4 +93,4 @@ export const SIGNAL_FIELD_BLOCK_OFFSETS = {
93
93
  } as const;
94
94
 
95
95
  /** Published package version. Kept in sync with package.json by a test. */
96
- export const VERSION = '0.6.21';
96
+ export const VERSION = '0.6.23';
package/src/format-header.ts CHANGED
@@ -58,9 +58,34 @@ function dimensionSuffix(signal: EdfHeader['signals'][number]): string {
58
58
  return dimension === '' ? '' : ` ${dimension}`;
59
59
  }
60
60
 
61
+ /**
62
+ * The rate for the table, rounded when the exact value would not fit in a column.
63
+ *
64
+ * `sampleRateHz` is `samplesPerRecord / recordDurationSeconds`, and that division does not have to
65
+ * come out. A 0.29 s record holding 20 samples is 68.96551724137932 Hz, and interpolating it raw
66
+ * put seventeen digits into a nine-character column — pushing `range` off its position on that row
67
+ * alone, which is the alignment `formatHeader` was fixed for once already in 0.3.96, arriving by a
68
+ * different route. It also stated a derived quotient to the last bit of a float64, in a table whose
69
+ * other numbers are what the file says.
70
+ *
71
+ * `~` rather than a silently rounded number, because this module promises never to invent a value.
72
+ * The exact rate is on `signal.sampleRateHz`, `edfcore signals` prints it unrounded for scripts,
73
+ * and `samplesPerRecord` is the authoritative field either way — `cli.md` says to index by that and
74
+ * never by the rate.
75
+ *
76
+ * A rate whose exact spelling already fits is printed exactly, so the ordinary file is unchanged
77
+ * and the tilde means something when it appears. A rate too small to survive two decimal places
78
+ * falls back to the exact value rather than printing `~0 Hz`, which would be a claim rather than a
79
+ * rounding.
80
+ */
61
81
  function formatRate(signal: EdfHeader['signals'][number]): string {
82
+ const rate = signal.sampleRateHz;
62
83
  // undefined is the honest answer for a zero record duration, which is legal EDF.
63
- return signal.sampleRateHz === undefined ? '—' : `${signal.sampleRateHz} Hz`;
84
+ if (rate === undefined) return '—';
85
+ const exact = `${rate}`;
86
+ if (exact.length <= 6) return `${exact} Hz`;
87
+ const rounded = Number(rate.toFixed(2));
88
+ return rounded === 0 ? `${exact} Hz` : `~${rounded} Hz`;
64
89
  }
65
90
 
66
91
  /**