edfcore 0.2.9 → 0.2.11

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Files changed (19) hide show
  1. package/CHANGELOG.md +24 -0
  2. package/dist/annotations-query.d.ts +8 -1
  3. package/dist/annotations-query.d.ts.map +1 -1
  4. package/dist/annotations-query.js +10 -3
  5. package/dist/annotations-query.js.map +1 -1
  6. package/dist/constants.d.ts +1 -1
  7. package/dist/constants.d.ts.map +1 -1
  8. package/dist/constants.js +1 -1
  9. package/dist/constants.js.map +1 -1
  10. package/dist/tal/annotations.d.ts.map +1 -1
  11. package/dist/tal/annotations.js +4 -0
  12. package/dist/tal/annotations.js.map +1 -1
  13. package/dist/types.d.ts +15 -1
  14. package/dist/types.d.ts.map +1 -1
  15. package/package.json +2 -2
  16. package/src/annotations-query.ts +10 -3
  17. package/src/constants.ts +1 -1
  18. package/src/tal/annotations.ts +4 -0
  19. package/src/types.ts +15 -1
package/CHANGELOG.md CHANGED
@@ -6,6 +6,30 @@ alone does not tell you whether you were affected.
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  edfcore is pre-1.0. Patch releases have carried behaviour changes where the old behaviour was a
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  defect; those are called out below.
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+ ## 0.2.11
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+
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+ - **Added** the first test that runs edfcore anywhere other than Node. All 1,293 of the others ran
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+ under `environment: 'node'`, where `process.env` and `Buffer.from` work perfectly — so nothing
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+ could catch the one mistake that breaks Chrome, Firefox and Safari at once: a bare Node global,
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+ which needs no import and so passes the existing module-graph walk untouched. The built
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+ universal bundle is now driven end to end in a child process whose Node-only globals have been
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+ replaced by getters that throw the way a browser does. Verified by planting one and watching it
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+ fail. `npm run check` builds before it tests, because the test loads `dist/`.
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+
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+ ## 0.2.10
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+
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+ - **Fixed** `filterAnnotationsByTime` and `annotationsAt` answering on the header's timebase while
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+ every read answers on the recording's. EDF+ lets a file put its sub-second start offset in
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+ record 0's timekeeping TAL; `onsetTicks` is the number the file wrote, and `readWindow` puts
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+ `t = 0` at the start of record 0. The two are identical on a file with no offset and up to a
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+ second apart on one that declares an offset, so `readWindow` and `filterAnnotationsByTime` — the
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+ pair that answers "the events in the window I just read" — disagreed on exactly the files
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+ careful enough to state their offset. Events landed in the neighbouring window, and one near the
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+ end landed in no window at all.
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+ - **Added** `EdfAnnotation.onsetTicksFromFirstRecord`: `onsetSecondsFromFirstRecord` without the
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+ float. Only the header-axis form was exact, so a caller comparing on the axis the rest of the
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+ package uses had nothing exact to compare with. This is what the two queries above now use.
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+
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  ## 0.2.9
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  - **Added** `physicalRangeOf(signal)`, the declared physical bounds in ascending order.
package/dist/annotations-query.d.ts CHANGED
@@ -9,7 +9,14 @@
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  * `a.onsetSecondsFromFirstRecord >= from && ... < to`, and those are float64 seconds converted
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  * from exact tick counts. An onset stored as `+30.0000001` and a bound of `30.0000001` need not
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  * compare equal once both have been through a division by 10,000,000. Every comparison here is on
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- * `onsetTicks`, which is exact, and the bounds are converted to ticks once.
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+ * ticks, which are exact, and the bounds are converted to ticks once.
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+ *
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+ * The ticks compared are `onsetTicksFromFirstRecord`, not `onsetTicks`. The window is in the same
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+ * seconds `resolveTimeWindow` and `readWindow` take, and those put `t = 0` at the start of record
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+ * 0; `onsetTicks` is on the header's timebase, which sits up to a second earlier when the file
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+ * declares a sub-second start offset in record 0's timekeeping TAL. Comparing against the wrong
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+ * one puts events in the neighbouring window on exactly the files that bother to state their
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+ * offset.
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  */
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  import type { EdfAnnotation, EdfAnnotationWindow } from './types.js';
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  /**
package/dist/annotations-query.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"annotations-query.d.ts","sourceRoot":"","sources":["../src/annotations-query.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAGH,OAAO,KAAK,EAAE,aAAa,EAAE,mBAAmB,EAAE,MAAM,YAAY,CAAC;AAErE;;;;;;;GAOG;AACH,wBAAgB,uBAAuB,CACrC,WAAW,EAAE,SAAS,aAAa,EAAE,EACrC,MAAM,EAAE,mBAAmB,GAC1B,SAAS,aAAa,EAAE,CAe1B;AAED;;;;;;;GAOG;AACH,wBAAgB,uBAAuB,CACrC,WAAW,EAAE,SAAS,aAAa,EAAE,EACrC,KAAK,EAAE,MAAM,GAAG,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GACnD,SAAS,aAAa,EAAE,CAQ1B;AAED;;;;;GAKG;AACH,wBAAgB,sBAAsB,CACpC,WAAW,EAAE,SAAS,aAAa,EAAE,GACpC,aAAa,CAAC;IAAE,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAA;CAAE,CAAC,CAQlE;AAED;;;;;;;;GAQG;AACH,wBAAgB,aAAa,CAC3B,WAAW,EAAE,SAAS,aAAa,EAAE,EACrC,OAAO,EAAE,MAAM,GACd,SAAS,aAAa,EAAE,CAS1B"}
1
+ {"version":3,"file":"annotations-query.d.ts","sourceRoot":"","sources":["../src/annotations-query.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;GAmBG;AAGH,OAAO,KAAK,EAAE,aAAa,EAAE,mBAAmB,EAAE,MAAM,YAAY,CAAC;AAErE;;;;;;;GAOG;AACH,wBAAgB,uBAAuB,CACrC,WAAW,EAAE,SAAS,aAAa,EAAE,EACrC,MAAM,EAAE,mBAAmB,GAC1B,SAAS,aAAa,EAAE,CAe1B;AAED;;;;;;;GAOG;AACH,wBAAgB,uBAAuB,CACrC,WAAW,EAAE,SAAS,aAAa,EAAE,EACrC,KAAK,EAAE,MAAM,GAAG,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GACnD,SAAS,aAAa,EAAE,CAQ1B;AAED;;;;;GAKG;AACH,wBAAgB,sBAAsB,CACpC,WAAW,EAAE,SAAS,aAAa,EAAE,GACpC,aAAa,CAAC;IAAE,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAA;CAAE,CAAC,CAQlE;AAED;;;;;;;;GAQG;AACH,wBAAgB,aAAa,CAC3B,WAAW,EAAE,SAAS,aAAa,EAAE,EACrC,OAAO,EAAE,MAAM,GACd,SAAS,aAAa,EAAE,CAS1B"}
package/dist/annotations-query.js CHANGED
@@ -9,7 +9,14 @@
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  * `a.onsetSecondsFromFirstRecord >= from && ... < to`, and those are float64 seconds converted
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  * from exact tick counts. An onset stored as `+30.0000001` and a bound of `30.0000001` need not
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  * compare equal once both have been through a division by 10,000,000. Every comparison here is on
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- * `onsetTicks`, which is exact, and the bounds are converted to ticks once.
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+ * ticks, which are exact, and the bounds are converted to ticks once.
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+ *
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+ * The ticks compared are `onsetTicksFromFirstRecord`, not `onsetTicks`. The window is in the same
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+ * seconds `resolveTimeWindow` and `readWindow` take, and those put `t = 0` at the start of record
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+ * 0; `onsetTicks` is on the header's timebase, which sits up to a second earlier when the file
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+ * declares a sub-second start offset in record 0's timekeeping TAL. Comparing against the wrong
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+ * one puts events in the neighbouring window on exactly the files that bother to state their
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+ * offset.
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  */
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  import { secondsToTicks } from './tal/ticks.js';
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  /**
@@ -26,7 +33,7 @@ export function filterAnnotationsByTime(annotations, window) {
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  if (to <= from)
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  return Object.freeze([]);
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  return Object.freeze(annotations.filter((annotation) => {
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- const onset = annotation.onsetTicks;
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+ const onset = annotation.onsetTicksFromFirstRecord;
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  const end = onset + (annotation.durationTicks ?? 0n);
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  // Half-open on both sides: [onset, end) against [from, to).
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  return (onset < to && (end > from || (annotation.durationTicks === undefined && onset >= from)));
@@ -73,7 +80,7 @@ export function countAnnotationsByText(annotations) {
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  export function annotationsAt(annotations, seconds) {
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  const at = secondsToTicks(seconds);
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  return Object.freeze(annotations.filter((annotation) => {
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- const onset = annotation.onsetTicks;
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+ const onset = annotation.onsetTicksFromFirstRecord;
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  const duration = annotation.durationTicks ?? 0n;
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  return duration === 0n ? onset === at : onset <= at && at < onset + duration;
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  }));
package/dist/annotations-query.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"annotations-query.js","sourceRoot":"","sources":["../src/annotations-query.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,gBAAgB,CAAC;AAGhD;;;;;;;GAOG;AACH,MAAM,UAAU,uBAAuB,CACrC,WAAqC,EACrC,MAA2B;IAE3B,MAAM,IAAI,GAAG,cAAc,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;IACjD,MAAM,EAAE,GAAG,IAAI,GAAG,cAAc,CAAC,MAAM,CAAC,eAAe,CAAC,CAAC;IACzD,IAAI,EAAE,IAAI,IAAI;QAAE,OAAO,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;IAEzC,OAAO,MAAM,CAAC,MAAM,CAClB,WAAW,CAAC,MAAM,CAAC,CAAC,UAAU,EAAE,EAAE;QAChC,MAAM,KAAK,GAAG,UAAU,CAAC,UAAU,CAAC;QACpC,MAAM,GAAG,GAAG,KAAK,GAAG,CAAC,UAAU,CAAC,aAAa,IAAI,EAAE,CAAC,CAAC;QACrD,4DAA4D;QAC5D,OAAO,CACL,KAAK,GAAG,EAAE,IAAI,CAAC,GAAG,GAAG,IAAI,IAAI,CAAC,UAAU,CAAC,aAAa,KAAK,SAAS,IAAI,KAAK,IAAI,IAAI,CAAC,CAAC,CACxF,CAAC;IACJ,CAAC,CAAC,CACH,CAAC;AACJ,CAAC;AAED;;;;;;;GAOG;AACH,MAAM,UAAU,uBAAuB,CACrC,WAAqC,EACrC,KAAoD;IAEpD,MAAM,IAAI,GACR,OAAO,KAAK,KAAK,QAAQ;QACvB,CAAC,CAAC,CAAC,IAAY,EAAW,EAAE,CAAC,IAAI,KAAK,KAAK;QAC3C,CAAC,CAAC,KAAK,YAAY,MAAM;YACvB,CAAC,CAAC,CAAC,IAAY,EAAW,EAAE,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC;YAC7C,CAAC,CAAC,KAAK,CAAC;IACd,OAAO,MAAM,CAAC,MAAM,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,UAAU,EAAE,EAAE,CAAC,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClF,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,sBAAsB,CACpC,WAAqC;IAErC,MAAM,MAAM,GAAG,IAAI,GAAG,EAAkB,CAAC;IACzC,KAAK,MAAM,UAAU,IAAI,WAAW,EAAE,CAAC;QACrC,MAAM,CAAC,GAAG,CAAC,UAAU,CAAC,IAAI,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;IACtE,CAAC;IACD,OAAO,MAAM,CAAC,MAAM,CAClB,CAAC,GAAG,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,EAAE,KAAK,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,IAAI,EAAE,KAAK,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,KAAK,GAAG,CAAC,CAAC,KAAK,CAAC,CACxF,CAAC;AACJ,CAAC;AAED;;;;;;;;GAQG;AACH,MAAM,UAAU,aAAa,CAC3B,WAAqC,EACrC,OAAe;IAEf,MAAM,EAAE,GAAG,cAAc,CAAC,OAAO,CAAC,CAAC;IACnC,OAAO,MAAM,CAAC,MAAM,CAClB,WAAW,CAAC,MAAM,CAAC,CAAC,UAAU,EAAE,EAAE;QAChC,MAAM,KAAK,GAAG,UAAU,CAAC,UAAU,CAAC;QACpC,MAAM,QAAQ,GAAG,UAAU,CAAC,aAAa,IAAI,EAAE,CAAC;QAChD,OAAO,QAAQ,KAAK,EAAE,CAAC,CAAC,CAAC,KAAK,KAAK,EAAE,CAAC,CAAC,CAAC,KAAK,IAAI,EAAE,IAAI,EAAE,GAAG,KAAK,GAAG,QAAQ,CAAC;IAC/E,CAAC,CAAC,CACH,CAAC;AACJ,CAAC"}
1
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package/dist/constants.d.ts CHANGED
@@ -109,5 +109,5 @@ export declare const SIGNAL_FIELD_BLOCK_OFFSETS: {
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  readonly reserved: 224;
110
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  };
111
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  /** Published package version. Kept in sync with package.json by a test. */
112
- export declare const VERSION = "0.2.9";
112
+ export declare const VERSION = "0.2.11";
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  //# sourceMappingURL=constants.d.ts.map
package/dist/constants.d.ts.map CHANGED
@@ -1 +1 @@
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package/dist/constants.js CHANGED
@@ -79,5 +79,5 @@ export const SIGNAL_FIELD_BLOCK_OFFSETS = {
79
79
  reserved: 224,
80
80
  };
81
81
  /** Published package version. Kept in sync with package.json by a test. */
82
- export const VERSION = '0.2.9';
82
+ export const VERSION = '0.2.11';
83
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  //# sourceMappingURL=constants.js.map
package/dist/constants.js.map CHANGED
@@ -1 +1 @@
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package/dist/tal/annotations.d.ts.map CHANGED
@@ -1 +1 @@
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+ {"version":3,"file":"annotations.d.ts","sourceRoot":"","sources":["../../src/tal/annotations.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAgCG;AAMH,OAAO,KAAK,EACV,wBAAwB,EAExB,oBAAoB,EACpB,SAAS,EAET,WAAW,EACZ,MAAM,aAAa,CAAC;AAqSrB,wBAAgB,iBAAiB,CAC/B,MAAM,EAAE,SAAS,EACjB,WAAW,EAAE,UAAU,EACvB,OAAO,EAAE,WAAW,EACpB,OAAO,CAAC,EAAE,wBAAwB,GACjC,oBAAoB,CAgJtB"}
package/dist/tal/annotations.js CHANGED
@@ -340,6 +340,10 @@ export function decodeAnnotations(header, recordBytes, records, options) {
340
340
  onsetSecondsFromHeaderStart: ticksToSeconds(item.onsetTicks),
341
341
  onsetSecondsFromFirstRecord: ticksToSeconds(item.onsetTicks - startOffsetTicks),
342
342
  onsetTicks: item.onsetTicks,
343
+ // The exact form of the line above. Saturating rather than wrapping, for the same reason
344
+ // record onsets do: an onset already at the edge of the int64 range must not come back as a
345
+ // large positive number after a subtraction.
346
+ onsetTicksFromFirstRecord: saturateToInt64(item.onsetTicks - startOffsetTicks),
343
347
  onsetRaw: item.onsetRaw,
344
348
  durationSeconds: item.durationTicks === undefined ? undefined : ticksToSeconds(item.durationTicks),
345
349
  durationTicks: item.durationTicks,
package/dist/tal/annotations.js.map CHANGED
@@ -1 +1 @@
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package/dist/types.d.ts CHANGED
@@ -409,8 +409,22 @@ export interface EdfAnnotation {
409
409
  readonly onsetSecondsFromHeaderStart: number;
410
410
  /** Rebased to the first record's true start — the EDFlib/pyEDFlib/MNE convention. */
411
411
  readonly onsetSecondsFromFirstRecord: number;
412
- /** Exact, in 100 ns units. Compare event times with this, never with the floats. */
412
+ /**
413
+ * Exact, in 100 ns units, on the HEADER's timebase — the number the file wrote, unrebased.
414
+ *
415
+ * This is the right field for comparing one annotation against another, and the wrong one for
416
+ * comparing an annotation against a window: `resolveTimeWindow`, `readWindow` and `readEnvelope`
417
+ * all put `t = 0` at the start of record 0, which is `onsetTicksFromFirstRecord`.
418
+ */
413
419
  readonly onsetTicks: bigint;
420
+ /**
421
+ * Exact, in 100 ns units, on the same axis as every read in the package: `t = 0` is the start of
422
+ * record 0. This is `onsetSecondsFromFirstRecord` without the float.
423
+ *
424
+ * It differs from `onsetTicks` by the sub-second start offset a file may declare in record 0's
425
+ * timekeeping TAL, so the two are equal on most files and up to a second apart on some.
426
+ */
427
+ readonly onsetTicksFromFirstRecord: bigint;
414
428
  /** The original digits, so precision is never lost to a round-trip. */
415
429
  readonly onsetRaw: string;
416
430
  readonly durationSeconds: number | undefined;
package/dist/types.d.ts.map CHANGED
@@ -1 +1 @@
1
- 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package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "edfcore",
3
- "version": "0.2.9",
3
+ "version": "0.2.11",
4
4
  "description": "Modern, typed, zero-dependency reader for EDF, EDF+, BDF and BDF+ biosignal files. Works in browsers and Node with true random access.",
5
5
  "keywords": [
6
6
  "edf",
@@ -68,7 +68,7 @@
68
68
  "test:watch": "vitest",
69
69
  "lint": "biome check .",
70
70
  "format": "biome format --write .",
71
- "check": "npm run lint && npm run typecheck && npm run test",
71
+ "check": "npm run lint && npm run typecheck && npm run build && npm run test",
72
72
  "corpus:fetch": "node scripts/fetch-corpus.mjs",
73
73
  "release": "node scripts/release.mjs",
74
74
  "prepublishOnly": "npm run check && npm run build"
package/src/annotations-query.ts CHANGED
@@ -9,7 +9,14 @@
9
9
  * `a.onsetSecondsFromFirstRecord >= from && ... < to`, and those are float64 seconds converted
10
10
  * from exact tick counts. An onset stored as `+30.0000001` and a bound of `30.0000001` need not
11
11
  * compare equal once both have been through a division by 10,000,000. Every comparison here is on
12
- * `onsetTicks`, which is exact, and the bounds are converted to ticks once.
12
+ * ticks, which are exact, and the bounds are converted to ticks once.
13
+ *
14
+ * The ticks compared are `onsetTicksFromFirstRecord`, not `onsetTicks`. The window is in the same
15
+ * seconds `resolveTimeWindow` and `readWindow` take, and those put `t = 0` at the start of record
16
+ * 0; `onsetTicks` is on the header's timebase, which sits up to a second earlier when the file
17
+ * declares a sub-second start offset in record 0's timekeeping TAL. Comparing against the wrong
18
+ * one puts events in the neighbouring window on exactly the files that bother to state their
19
+ * offset.
13
20
  */
14
21
 
15
22
  import { secondsToTicks } from './tal/ticks.js';
@@ -33,7 +40,7 @@ export function filterAnnotationsByTime(
33
40
 
34
41
  return Object.freeze(
35
42
  annotations.filter((annotation) => {
36
- const onset = annotation.onsetTicks;
43
+ const onset = annotation.onsetTicksFromFirstRecord;
37
44
  const end = onset + (annotation.durationTicks ?? 0n);
38
45
  // Half-open on both sides: [onset, end) against [from, to).
39
46
  return (
@@ -98,7 +105,7 @@ export function annotationsAt(
98
105
  const at = secondsToTicks(seconds);
99
106
  return Object.freeze(
100
107
  annotations.filter((annotation) => {
101
- const onset = annotation.onsetTicks;
108
+ const onset = annotation.onsetTicksFromFirstRecord;
102
109
  const duration = annotation.durationTicks ?? 0n;
103
110
  return duration === 0n ? onset === at : onset <= at && at < onset + duration;
104
111
  }),
package/src/constants.ts CHANGED
@@ -93,4 +93,4 @@ export const SIGNAL_FIELD_BLOCK_OFFSETS = {
93
93
  } as const;
94
94
 
95
95
  /** Published package version. Kept in sync with package.json by a test. */
96
- export const VERSION = '0.2.9';
96
+ export const VERSION = '0.2.11';
package/src/tal/annotations.ts CHANGED
@@ -463,6 +463,10 @@ export function decodeAnnotations(
463
463
  onsetSecondsFromHeaderStart: ticksToSeconds(item.onsetTicks),
464
464
  onsetSecondsFromFirstRecord: ticksToSeconds(item.onsetTicks - startOffsetTicks),
465
465
  onsetTicks: item.onsetTicks,
466
+ // The exact form of the line above. Saturating rather than wrapping, for the same reason
467
+ // record onsets do: an onset already at the edge of the int64 range must not come back as a
468
+ // large positive number after a subtraction.
469
+ onsetTicksFromFirstRecord: saturateToInt64(item.onsetTicks - startOffsetTicks),
466
470
  onsetRaw: item.onsetRaw,
467
471
  durationSeconds:
468
472
  item.durationTicks === undefined ? undefined : ticksToSeconds(item.durationTicks),
package/src/types.ts CHANGED
@@ -481,8 +481,22 @@ export interface EdfAnnotation {
481
481
  readonly onsetSecondsFromHeaderStart: number;
482
482
  /** Rebased to the first record's true start — the EDFlib/pyEDFlib/MNE convention. */
483
483
  readonly onsetSecondsFromFirstRecord: number;
484
- /** Exact, in 100 ns units. Compare event times with this, never with the floats. */
484
+ /**
485
+ * Exact, in 100 ns units, on the HEADER's timebase — the number the file wrote, unrebased.
486
+ *
487
+ * This is the right field for comparing one annotation against another, and the wrong one for
488
+ * comparing an annotation against a window: `resolveTimeWindow`, `readWindow` and `readEnvelope`
489
+ * all put `t = 0` at the start of record 0, which is `onsetTicksFromFirstRecord`.
490
+ */
485
491
  readonly onsetTicks: bigint;
492
+ /**
493
+ * Exact, in 100 ns units, on the same axis as every read in the package: `t = 0` is the start of
494
+ * record 0. This is `onsetSecondsFromFirstRecord` without the float.
495
+ *
496
+ * It differs from `onsetTicks` by the sub-second start offset a file may declare in record 0's
497
+ * timekeeping TAL, so the two are equal on most files and up to a second apart on some.
498
+ */
499
+ readonly onsetTicksFromFirstRecord: bigint;
486
500
  /** The original digits, so precision is never lost to a round-trip. */
487
501
  readonly onsetRaw: string;
488
502
  readonly durationSeconds: number | undefined;