edfcore 0.2.8 → 0.2.10

package/CHANGELOG.md

@@ -6,6 +6,28 @@ alone does not tell you whether you were affected.
 edfcore is pre-1.0. Patch releases have carried behaviour changes where the old behaviour was a
 defect; those are called out below.
 
+## 0.2.10
+
+- **Fixed** `filterAnnotationsByTime` and `annotationsAt` answering on the header's timebase while
+  every read answers on the recording's. EDF+ lets a file put its sub-second start offset in
+  record 0's timekeeping TAL; `onsetTicks` is the number the file wrote, and `readWindow` puts
+  `t = 0` at the start of record 0. The two are identical on a file with no offset and up to a
+  second apart on one that declares an offset, so `readWindow` and `filterAnnotationsByTime` — the
+  pair that answers "the events in the window I just read" — disagreed on exactly the files
+  careful enough to state their offset. Events landed in the neighbouring window, and one near the
+  end landed in no window at all.
+- **Added** `EdfAnnotation.onsetTicksFromFirstRecord`: `onsetSecondsFromFirstRecord` without the
+  float. Only the header-axis form was exact, so a caller comparing on the axis the rest of the
+  package uses had nothing exact to compare with. This is what the two queries above now use.
+
+## 0.2.9
+
+- **Added** `physicalRangeOf(signal)`, the declared physical bounds in ascending order.
+  `physicalMinimum` is not the smaller of the two: a negative amplifier gain is declared by
+  putting the larger value in the minimum field, and reading the fields in field order gives a
+  viewer an inverted y-axis on exactly the channels whose trace is also inverted — two errors
+  that cancel on screen while both are wrong.
+
 ## 0.2.8
 
 - **Added** `mergeChunks(chunks)`. `readWindow` splits at every discontinuity, and joining the

package/dist/annotations-query.d.ts

@@ -9,7 +9,14 @@
  * `a.onsetSecondsFromFirstRecord >= from && ... < to`, and those are float64 seconds converted
  * from exact tick counts. An onset stored as `+30.0000001` and a bound of `30.0000001` need not
  * compare equal once both have been through a division by 10,000,000. Every comparison here is on
- * `onsetTicks`, which is exact, and the bounds are converted to ticks once.
+ * ticks, which are exact, and the bounds are converted to ticks once.
+ *
+ * The ticks compared are `onsetTicksFromFirstRecord`, not `onsetTicks`. The window is in the same
+ * seconds `resolveTimeWindow` and `readWindow` take, and those put `t = 0` at the start of record
+ * 0; `onsetTicks` is on the header's timebase, which sits up to a second earlier when the file
+ * declares a sub-second start offset in record 0's timekeeping TAL. Comparing against the wrong
+ * one puts events in the neighbouring window on exactly the files that bother to state their
+ * offset.
  */
 import type { EdfAnnotation, EdfAnnotationWindow } from './types.js';
 /**

package/dist/annotations-query.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"annotations-query.d.ts","sourceRoot":"","sources":["../src/annotations-query.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;GAmBG;AAGH,OAAO,KAAK,EAAE,aAAa,EAAE,mBAAmB,EAAE,MAAM,YAAY,CAAC;AAErE;;;;;;;GAOG;AACH,wBAAgB,uBAAuB,CACrC,WAAW,EAAE,SAAS,aAAa,EAAE,EACrC,MAAM,EAAE,mBAAmB,GAC1B,SAAS,aAAa,EAAE,CAe1B;AAED;;;;;;;GAOG;AACH,wBAAgB,uBAAuB,CACrC,WAAW,EAAE,SAAS,aAAa,EAAE,EACrC,KAAK,EAAE,MAAM,GAAG,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GACnD,SAAS,aAAa,EAAE,CAQ1B;AAED;;;;;GAKG;AACH,wBAAgB,sBAAsB,CACpC,WAAW,EAAE,SAAS,aAAa,EAAE,GACpC,aAAa,CAAC;IAAE,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAA;CAAE,CAAC,CAQlE;AAED;;;;;;;;GAQG;AACH,wBAAgB,aAAa,CAC3B,WAAW,EAAE,SAAS,aAAa,EAAE,EACrC,OAAO,EAAE,MAAM,GACd,SAAS,aAAa,EAAE,CAS1B"}

package/dist/annotations-query.js

@@ -9,7 +9,14 @@
  * `a.onsetSecondsFromFirstRecord >= from && ... < to`, and those are float64 seconds converted
  * from exact tick counts. An onset stored as `+30.0000001` and a bound of `30.0000001` need not
  * compare equal once both have been through a division by 10,000,000. Every comparison here is on
- * `onsetTicks`, which is exact, and the bounds are converted to ticks once.
+ * ticks, which are exact, and the bounds are converted to ticks once.
+ *
+ * The ticks compared are `onsetTicksFromFirstRecord`, not `onsetTicks`. The window is in the same
+ * seconds `resolveTimeWindow` and `readWindow` take, and those put `t = 0` at the start of record
+ * 0; `onsetTicks` is on the header's timebase, which sits up to a second earlier when the file
+ * declares a sub-second start offset in record 0's timekeeping TAL. Comparing against the wrong
+ * one puts events in the neighbouring window on exactly the files that bother to state their
+ * offset.
  */
 import { secondsToTicks } from './tal/ticks.js';
 /**
@@ -26,7 +33,7 @@ export function filterAnnotationsByTime(annotations, window) {
     if (to <= from)
         return Object.freeze([]);
     return Object.freeze(annotations.filter((annotation) => {
-        const onset = annotation.onsetTicks;
+        const onset = annotation.onsetTicksFromFirstRecord;
         const end = onset + (annotation.durationTicks ?? 0n);
         // Half-open on both sides: [onset, end) against [from, to).
         return (onset < to && (end > from || (annotation.durationTicks === undefined && onset >= from)));
@@ -73,7 +80,7 @@ export function countAnnotationsByText(annotations) {
 export function annotationsAt(annotations, seconds) {
     const at = secondsToTicks(seconds);
     return Object.freeze(annotations.filter((annotation) => {
-        const onset = annotation.onsetTicks;
+        const onset = annotation.onsetTicksFromFirstRecord;
         const duration = annotation.durationTicks ?? 0n;
         return duration === 0n ? onset === at : onset <= at && at < onset + duration;
     }));

package/dist/annotations-query.js.map

@@ -1 +1 @@
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+{"version":3,"file":"annotations-query.js","sourceRoot":"","sources":["../src/annotations-query.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;GAmBG;AAEH,OAAO,EAAE,cAAc,EAAE,MAAM,gBAAgB,CAAC;AAGhD;;;;;;;GAOG;AACH,MAAM,UAAU,uBAAuB,CACrC,WAAqC,EACrC,MAA2B;IAE3B,MAAM,IAAI,GAAG,cAAc,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;IACjD,MAAM,EAAE,GAAG,IAAI,GAAG,cAAc,CAAC,MAAM,CAAC,eAAe,CAAC,CAAC;IACzD,IAAI,EAAE,IAAI,IAAI;QAAE,OAAO,MAAM,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC;IAEzC,OAAO,MAAM,CAAC,MAAM,CAClB,WAAW,CAAC,MAAM,CAAC,CAAC,UAAU,EAAE,EAAE;QAChC,MAAM,KAAK,GAAG,UAAU,CAAC,yBAAyB,CAAC;QACnD,MAAM,GAAG,GAAG,KAAK,GAAG,CAAC,UAAU,CAAC,aAAa,IAAI,EAAE,CAAC,CAAC;QACrD,4DAA4D;QAC5D,OAAO,CACL,KAAK,GAAG,EAAE,IAAI,CAAC,GAAG,GAAG,IAAI,IAAI,CAAC,UAAU,CAAC,aAAa,KAAK,SAAS,IAAI,KAAK,IAAI,IAAI,CAAC,CAAC,CACxF,CAAC;IACJ,CAAC,CAAC,CACH,CAAC;AACJ,CAAC;AAED;;;;;;;GAOG;AACH,MAAM,UAAU,uBAAuB,CACrC,WAAqC,EACrC,KAAoD;IAEpD,MAAM,IAAI,GACR,OAAO,KAAK,KAAK,QAAQ;QACvB,CAAC,CAAC,CAAC,IAAY,EAAW,EAAE,CAAC,IAAI,KAAK,KAAK;QAC3C,CAAC,CAAC,KAAK,YAAY,MAAM;YACvB,CAAC,CAAC,CAAC,IAAY,EAAW,EAAE,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC;YAC7C,CAAC,CAAC,KAAK,CAAC;IACd,OAAO,MAAM,CAAC,MAAM,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,UAAU,EAAE,EAAE,CAAC,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;AAClF,CAAC;AAED;;;;;GAKG;AACH,MAAM,UAAU,sBAAsB,CACpC,WAAqC;IAErC,MAAM,MAAM,GAAG,IAAI,GAAG,EAAkB,CAAC;IACzC,KAAK,MAAM,UAAU,IAAI,WAAW,EAAE,CAAC;QACrC,MAAM,CAAC,GAAG,CAAC,UAAU,CAAC,IAAI,EAAE,CAAC,MAAM,CAAC,GAAG,CAAC,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC;IACtE,CAAC;IACD,OAAO,MAAM,CAAC,MAAM,CAClB,CAAC,GAAG,MAAM,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,EAAE,KAAK,CAAC,EAAE,EAAE,CAAC,CAAC,EAAE,IAAI,EAAE,KAAK,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,KAAK,GAAG,CAAC,CAAC,KAAK,CAAC,CACxF,CAAC;AACJ,CAAC;AAED;;;;;;;;GAQG;AACH,MAAM,UAAU,aAAa,CAC3B,WAAqC,EACrC,OAAe;IAEf,MAAM,EAAE,GAAG,cAAc,CAAC,OAAO,CAAC,CAAC;IACnC,OAAO,MAAM,CAAC,MAAM,CAClB,WAAW,CAAC,MAAM,CAAC,CAAC,UAAU,EAAE,EAAE;QAChC,MAAM,KAAK,GAAG,UAAU,CAAC,yBAAyB,CAAC;QACnD,MAAM,QAAQ,GAAG,UAAU,CAAC,aAAa,IAAI,EAAE,CAAC;QAChD,OAAO,QAAQ,KAAK,EAAE,CAAC,CAAC,CAAC,KAAK,KAAK,EAAE,CAAC,CAAC,CAAC,KAAK,IAAI,EAAE,IAAI,EAAE,GAAG,KAAK,GAAG,QAAQ,CAAC;IAC/E,CAAC,CAAC,CACH,CAAC;AACJ,CAAC"}

package/dist/constants.d.ts

@@ -109,5 +109,5 @@ export declare const SIGNAL_FIELD_BLOCK_OFFSETS: {
     readonly reserved: 224;
 };
 /** Published package version. Kept in sync with package.json by a test. */
-export declare const VERSION = "0.2.8";
+export declare const VERSION = "0.2.10";
 //# sourceMappingURL=constants.d.ts.map

package/dist/constants.d.ts.map

@@ -1 +1 @@
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package/dist/constants.js

@@ -79,5 +79,5 @@ export const SIGNAL_FIELD_BLOCK_OFFSETS = {
     reserved: 224,
 };
 /** Published package version. Kept in sync with package.json by a test. */
-export const VERSION = '0.2.8';
+export const VERSION = '0.2.10';
 //# sourceMappingURL=constants.js.map

package/dist/constants.js.map

@@ -1 +1 @@
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package/dist/decode/physical.d.ts

@@ -25,6 +25,27 @@ export type { MaterializeOptions } from './digital.js';
  * and `decodeDigital` keeps working on such a signal.
  */
 export declare function toPhysical(signal: EdfSignal, digital: ArrayLike<number>, out?: Float64Array, options?: MaterializeOptions): Float64Array;
+/**
+ * The signal's declared physical bounds, in ascending order.
+ *
+ * `signal.physicalMinimum` is not the smaller of the two. A negative amplifier gain is declared
+ * by putting the larger value in the minimum field, it is legal, and edfcore never "fixes" it —
+ * so `{ low: signal.physicalMinimum, high: signal.physicalMaximum }` written by hand gives a
+ * viewer an inverted y-axis on exactly the channels where the trace is also inverted, and the
+ * two mistakes hide each other.
+ *
+ * This is the DECLARED envelope, not the observed one: samples outside it exist (that is what
+ * `outOfDigitalRangeCount` counts) and this function does not look at any. It is what a fixed
+ * axis or a gain control should be built from.
+ *
+ * Throws `RangeError` when either bound is not finite, for the reason `clampToDigitalRange`
+ * does: `Math.min(NaN, x)` is `NaN`, and an axis from `NaN` to `NaN` draws nothing while
+ * reporting no error at all.
+ */
+export declare function physicalRangeOf(signal: EdfSignal): {
+    readonly low: number;
+    readonly high: number;
+};
 /**
  * Clamp to the declared digital range. POST-HOC ONLY — nothing on the read path calls this.
  *

package/dist/decode/physical.d.ts.map

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package/dist/decode/physical.js

@@ -147,6 +147,35 @@ export function toPhysical(signal, digital, out, options) {
     }
     return physical;
 }
+/**
+ * The signal's declared physical bounds, in ascending order.
+ *
+ * `signal.physicalMinimum` is not the smaller of the two. A negative amplifier gain is declared
+ * by putting the larger value in the minimum field, it is legal, and edfcore never "fixes" it —
+ * so `{ low: signal.physicalMinimum, high: signal.physicalMaximum }` written by hand gives a
+ * viewer an inverted y-axis on exactly the channels where the trace is also inverted, and the
+ * two mistakes hide each other.
+ *
+ * This is the DECLARED envelope, not the observed one: samples outside it exist (that is what
+ * `outOfDigitalRangeCount` counts) and this function does not look at any. It is what a fixed
+ * axis or a gain control should be built from.
+ *
+ * Throws `RangeError` when either bound is not finite, for the reason `clampToDigitalRange`
+ * does: `Math.min(NaN, x)` is `NaN`, and an axis from `NaN` to `NaN` draws nothing while
+ * reporting no error at all.
+ */
+export function physicalRangeOf(signal) {
+    const { physicalMinimum, physicalMaximum } = signal;
+    if (!Number.isFinite(physicalMinimum) || !Number.isFinite(physicalMaximum)) {
+        throw new RangeError(`signal ${signal.index} "${signal.label}" declares physical minimum ` +
+            `"${signal.raw.physicalMinimum}" and physical maximum "${signal.raw.physicalMaximum}", ` +
+            'which do not both parse as numbers, so it has no physical range. Next: read ' +
+            'header.diagnostics for this signal.');
+    }
+    return physicalMinimum <= physicalMaximum
+        ? { low: physicalMinimum, high: physicalMaximum }
+        : { low: physicalMaximum, high: physicalMinimum };
+}
 /**
  * Clamp to the declared digital range. POST-HOC ONLY — nothing on the read path calls this.
  *

package/dist/decode/physical.js.map

@@ -1 +1 @@
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package/dist/index.d.ts

@@ -28,7 +28,7 @@ export { EdfAmbiguousChannelError, EdfBudgetError, EdfChannelNotFoundError, EdfE
 export { BDF_ANNOTATIONS_LABEL, BDF_DIGITAL_MAX, BDF_DIGITAL_MIN, EDF_ANNOTATIONS_LABEL, EDF_DIGITAL_MAX, EDF_DIGITAL_MIN, EDF_HEADER_BLOCK_BYTES, EDF_RECOMMENDED_MAX_RECORD_BYTES, TICKS_PER_SECOND, VERSION, } from './constants.js';
 export { decodeHeaderLatin1 } from './bytes/latin1.js';
 export { decodeDigital } from './decode/digital.js';
-export { clampToDigitalRange, toPhysical } from './decode/physical.js';
+export { clampToDigitalRange, physicalRangeOf, toPhysical } from './decode/physical.js';
 export { formatDiagnostics } from './diagnostics/format.js';
 export { formatStartTimeNaive } from './header/dates.js';
 export { declaredDurationSeconds, findSignals, getSignal, isAnnotationLabel, matchSignals, } from './header/lookup.js';

package/dist/index.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;GAoBG;AAOH,mFAAmF;AACnF,YAAY,EAAE,kBAAkB,EAAE,MAAM,qBAAqB,CAAC;AAC9D,YAAY,EAAE,wBAAwB,EAAE,MAAM,yBAAyB,CAAC;AACxE,YAAY,EACV,eAAe,EACf,QAAQ,EACR,iBAAiB,EACjB,UAAU,EACV,YAAY,EACZ,wBAAwB,EACxB,aAAa,EACb,oBAAoB,EACpB,mBAAmB,EACnB,eAAe,EACf,QAAQ,EACR,cAAc,EACd,YAAY,EACZ,aAAa,EACb,iBAAiB,EACjB,gBAAgB,EAChB,iBAAiB,EACjB,MAAM,EACN,SAAS,EACT,aAAa,EACb,sBAAsB,EACtB,WAAW,EACX,YAAY,EACZ,mBAAmB,EACnB,kBAAkB,EAClB,kBAAkB,EAClB,cAAc,EACd,YAAY,EACZ,cAAc,EACd,iBAAiB,EACjB,QAAQ,EACR,UAAU,EACV,WAAW,EACX,SAAS,EACT,YAAY,EACZ,aAAa,EACb,WAAW,EACX,eAAe,EACf,UAAU,EACV,iBAAiB,EACjB,SAAS,EACT,mBAAmB,EACnB,gBAAgB,EAChB,iBAAiB,EACjB,WAAW,EACX,YAAY,EACZ,WAAW,EACX,WAAW,EACX,eAAe,EACf,eAAe,EACf,gBAAgB,EAChB,eAAe,GAChB,MAAM,YAAY,CAAC;AAUpB,YAAY,EAAE,WAAW,EAAE,YAAY,EAAE,kBAAkB,EAAE,MAAM,aAAa,CAAC;AACjF,OAAO,EACL,wBAAwB,EACxB,cAAc,EACd,uBAAuB,EACvB,QAAQ,EACR,cAAc,EACd,aAAa,EACb,eAAe,EACf,cAAc,EACd,UAAU,GACX,MAAM,aAAa,CAAC;AAMrB,OAAO,EACL,qBAAqB,EACrB,eAAe,EACf,eAAe,EACf,qBAAqB,EACrB,eAAe,EACf,eAAe,EACf,sBAAsB,EACtB,gCAAgC,EAChC,gBAAgB,EAChB,OAAO,GACR,MAAM,gBAAgB,CAAC;AAOxB,OAAO,EAAE,kBAAkB,EAAE,MAAM,mBAAmB,CAAC;AACvD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,mBAAmB,EAAE,eAAe,EAAE,UAAU,EAAE,MAAM,sBAAsB,CAAC;AACxF,OAAO,EAAE,iBAAiB,EAAE,MAAM,yBAAyB,CAAC;AAC5D,OAAO,EAAE,oBAAoB,EAAE,MAAM,mBAAmB,CAAC;AACzD,OAAO,EACL,uBAAuB,EACvB,WAAW,EACX,SAAS,EACT,iBAAiB,EACjB,YAAY,GACb,MAAM,oBAAoB,CAAC;AAC5B,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AACzD,OAAO,EAAE,iBAAiB,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAC;AAQnE,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAC;AAC3C,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC;AAC9C,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAM1C,OAAO,EAAE,UAAU,EAAE,eAAe,EAAE,MAAM,cAAc,CAAC;AAC3D,OAAO,EAAE,gBAAgB,EAAE,aAAa,EAAE,YAAY,EAAE,MAAM,mBAAmB,CAAC;AAMlF,OAAO,EACL,aAAa,EACb,sBAAsB,EACtB,uBAAuB,EACvB,uBAAuB,GACxB,MAAM,wBAAwB,CAAC;AAChC,OAAO,EAAE,gBAAgB,EAAE,eAAe,EAAE,YAAY,EAAE,MAAM,cAAc,CAAC;AAC/E,OAAO,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAC1C,OAAO,EACL,iBAAiB,EACjB,YAAY,EACZ,wBAAwB,EACxB,kBAAkB,GACnB,MAAM,eAAe,CAAC;AACvB,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,OAAO,EAAE,eAAe,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AACnF,OAAO,EACL,aAAa,EACb,kBAAkB,EAClB,gBAAgB,GACjB,MAAM,kBAAkB,CAAC;AAC1B,OAAO,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC"}

package/dist/index.js

@@ -30,7 +30,7 @@ export { BDF_ANNOTATIONS_LABEL, BDF_DIGITAL_MAX, BDF_DIGITAL_MIN, EDF_ANNOTATION
 // ===========================================================================
 export { decodeHeaderLatin1 } from './bytes/latin1.js';
 export { decodeDigital } from './decode/digital.js';
-export { clampToDigitalRange, toPhysical } from './decode/physical.js';
+export { clampToDigitalRange, physicalRangeOf, toPhysical } from './decode/physical.js';
 export { formatDiagnostics } from './diagnostics/format.js';
 export { formatStartTimeNaive } from './header/dates.js';
 export { declaredDurationSeconds, findSignals, getSignal, isAnnotationLabel, matchSignals, } from './header/lookup.js';

package/dist/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;GAoBG;AA0EH,OAAO,EACL,wBAAwB,EACxB,cAAc,EACd,uBAAuB,EACvB,QAAQ,EACR,cAAc,EACd,aAAa,EACb,eAAe,EACf,cAAc,EACd,UAAU,GACX,MAAM,aAAa,CAAC;AAErB,8EAA8E;AAC9E,YAAY;AACZ,8EAA8E;AAE9E,OAAO,EACL,qBAAqB,EACrB,eAAe,EACf,eAAe,EACf,qBAAqB,EACrB,eAAe,EACf,eAAe,EACf,sBAAsB,EACtB,gCAAgC,EAChC,gBAAgB,EAChB,OAAO,GACR,MAAM,gBAAgB,CAAC;AAExB,8EAA8E;AAC9E,2EAA2E;AAC3E,2CAA2C;AAC3C,8EAA8E;AAE9E,OAAO,EAAE,kBAAkB,EAAE,MAAM,mBAAmB,CAAC;AACvD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,mBAAmB,EAAE,UAAU,EAAE,MAAM,sBAAsB,CAAC;AACvE,OAAO,EAAE,iBAAiB,EAAE,MAAM,yBAAyB,CAAC;AAC5D,OAAO,EAAE,oBAAoB,EAAE,MAAM,mBAAmB,CAAC;AACzD,OAAO,EACL,uBAAuB,EACvB,WAAW,EACX,SAAS,EACT,iBAAiB,EACjB,YAAY,GACb,MAAM,oBAAoB,CAAC;AAC5B,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AACzD,OAAO,EAAE,iBAAiB,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAC;AAEnE,8EAA8E;AAC9E,yEAAyE;AACzE,2EAA2E;AAC3E,6CAA6C;AAC7C,8EAA8E;AAE9E,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAC;AAC3C,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC;AAC9C,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAE1C,8EAA8E;AAC9E,uCAAuC;AACvC,8EAA8E;AAE9E,OAAO,EAAE,UAAU,EAAE,eAAe,EAAE,MAAM,cAAc,CAAC;AAC3D,OAAO,EAAE,gBAAgB,EAAE,aAAa,EAAE,YAAY,EAAE,MAAM,mBAAmB,CAAC;AAElF,8EAA8E;AAC9E,oBAAoB;AACpB,8EAA8E;AAE9E,OAAO,EACL,aAAa,EACb,sBAAsB,EACtB,uBAAuB,EACvB,uBAAuB,GACxB,MAAM,wBAAwB,CAAC;AAChC,OAAO,EAAE,gBAAgB,EAAE,eAAe,EAAE,YAAY,EAAE,MAAM,cAAc,CAAC;AAC/E,OAAO,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAC1C,OAAO,EACL,iBAAiB,EACjB,YAAY,EACZ,wBAAwB,EACxB,kBAAkB,GACnB,MAAM,eAAe,CAAC;AACvB,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,OAAO,EAAE,eAAe,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AACnF,OAAO,EACL,aAAa,EACb,kBAAkB,EAClB,gBAAgB,GACjB,MAAM,kBAAkB,CAAC;AAC1B,OAAO,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;GAoBG;AA0EH,OAAO,EACL,wBAAwB,EACxB,cAAc,EACd,uBAAuB,EACvB,QAAQ,EACR,cAAc,EACd,aAAa,EACb,eAAe,EACf,cAAc,EACd,UAAU,GACX,MAAM,aAAa,CAAC;AAErB,8EAA8E;AAC9E,YAAY;AACZ,8EAA8E;AAE9E,OAAO,EACL,qBAAqB,EACrB,eAAe,EACf,eAAe,EACf,qBAAqB,EACrB,eAAe,EACf,eAAe,EACf,sBAAsB,EACtB,gCAAgC,EAChC,gBAAgB,EAChB,OAAO,GACR,MAAM,gBAAgB,CAAC;AAExB,8EAA8E;AAC9E,2EAA2E;AAC3E,2CAA2C;AAC3C,8EAA8E;AAE9E,OAAO,EAAE,kBAAkB,EAAE,MAAM,mBAAmB,CAAC;AACvD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,mBAAmB,EAAE,eAAe,EAAE,UAAU,EAAE,MAAM,sBAAsB,CAAC;AACxF,OAAO,EAAE,iBAAiB,EAAE,MAAM,yBAAyB,CAAC;AAC5D,OAAO,EAAE,oBAAoB,EAAE,MAAM,mBAAmB,CAAC;AACzD,OAAO,EACL,uBAAuB,EACvB,WAAW,EACX,SAAS,EACT,iBAAiB,EACjB,YAAY,GACb,MAAM,oBAAoB,CAAC;AAC5B,OAAO,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AAChD,OAAO,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AACzD,OAAO,EAAE,iBAAiB,EAAE,YAAY,EAAE,MAAM,kBAAkB,CAAC;AAEnE,8EAA8E;AAC9E,yEAAyE;AACzE,2EAA2E;AAC3E,6CAA6C;AAC7C,8EAA8E;AAE9E,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAC;AAC3C,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC;AAC9C,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAE1C,8EAA8E;AAC9E,uCAAuC;AACvC,8EAA8E;AAE9E,OAAO,EAAE,UAAU,EAAE,eAAe,EAAE,MAAM,cAAc,CAAC;AAC3D,OAAO,EAAE,gBAAgB,EAAE,aAAa,EAAE,YAAY,EAAE,MAAM,mBAAmB,CAAC;AAElF,8EAA8E;AAC9E,oBAAoB;AACpB,8EAA8E;AAE9E,OAAO,EACL,aAAa,EACb,sBAAsB,EACtB,uBAAuB,EACvB,uBAAuB,GACxB,MAAM,wBAAwB,CAAC;AAChC,OAAO,EAAE,gBAAgB,EAAE,eAAe,EAAE,YAAY,EAAE,MAAM,cAAc,CAAC;AAC/E,OAAO,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAC1C,OAAO,EACL,iBAAiB,EACjB,YAAY,EACZ,wBAAwB,EACxB,kBAAkB,GACnB,MAAM,eAAe,CAAC;AACvB,OAAO,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAClD,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,OAAO,EAAE,eAAe,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,gBAAgB,CAAC;AACnF,OAAO,EACL,aAAa,EACb,kBAAkB,EAClB,gBAAgB,GACjB,MAAM,kBAAkB,CAAC;AAC1B,OAAO,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC"}

package/dist/tal/annotations.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"annotations.d.ts","sourceRoot":"","sources":["../../src/tal/annotations.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAgCG;AAMH,OAAO,KAAK,EACV,wBAAwB,EAExB,oBAAoB,EACpB,SAAS,EAET,WAAW,EACZ,MAAM,aAAa,CAAC;AAqSrB,wBAAgB,iBAAiB,CAC/B,MAAM,EAAE,SAAS,EACjB,WAAW,EAAE,UAAU,EACvB,OAAO,EAAE,WAAW,EACpB,OAAO,CAAC,EAAE,wBAAwB,GACjC,oBAAoB,CA4ItB"}
+{"version":3,"file":"annotations.d.ts","sourceRoot":"","sources":["../../src/tal/annotations.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAgCG;AAMH,OAAO,KAAK,EACV,wBAAwB,EAExB,oBAAoB,EACpB,SAAS,EAET,WAAW,EACZ,MAAM,aAAa,CAAC;AAqSrB,wBAAgB,iBAAiB,CAC/B,MAAM,EAAE,SAAS,EACjB,WAAW,EAAE,UAAU,EACvB,OAAO,EAAE,WAAW,EACpB,OAAO,CAAC,EAAE,wBAAwB,GACjC,oBAAoB,CAgJtB"}

package/dist/tal/annotations.js

@@ -340,6 +340,10 @@ export function decodeAnnotations(header, recordBytes, records, options) {
         onsetSecondsFromHeaderStart: ticksToSeconds(item.onsetTicks),
         onsetSecondsFromFirstRecord: ticksToSeconds(item.onsetTicks - startOffsetTicks),
         onsetTicks: item.onsetTicks,
+        // The exact form of the line above. Saturating rather than wrapping, for the same reason
+        // record onsets do: an onset already at the edge of the int64 range must not come back as a
+        // large positive number after a subtraction.
+        onsetTicksFromFirstRecord: saturateToInt64(item.onsetTicks - startOffsetTicks),
         onsetRaw: item.onsetRaw,
         durationSeconds: item.durationTicks === undefined ? undefined : ticksToSeconds(item.durationTicks),
         durationTicks: item.durationTicks,

package/dist/tal/annotations.js.map

@@ -1 +1 @@
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package/dist/types.d.ts

@@ -409,8 +409,22 @@ export interface EdfAnnotation {
     readonly onsetSecondsFromHeaderStart: number;
     /** Rebased to the first record's true start — the EDFlib/pyEDFlib/MNE convention. */
     readonly onsetSecondsFromFirstRecord: number;
-    /** Exact, in 100 ns units. Compare event times with this, never with the floats. */
+    /**
+     * Exact, in 100 ns units, on the HEADER's timebase — the number the file wrote, unrebased.
+     *
+     * This is the right field for comparing one annotation against another, and the wrong one for
+     * comparing an annotation against a window: `resolveTimeWindow`, `readWindow` and `readEnvelope`
+     * all put `t = 0` at the start of record 0, which is `onsetTicksFromFirstRecord`.
+     */
     readonly onsetTicks: bigint;
+    /**
+     * Exact, in 100 ns units, on the same axis as every read in the package: `t = 0` is the start of
+     * record 0. This is `onsetSecondsFromFirstRecord` without the float.
+     *
+     * It differs from `onsetTicks` by the sub-second start offset a file may declare in record 0's
+     * timekeeping TAL, so the two are equal on most files and up to a second apart on some.
+     */
+    readonly onsetTicksFromFirstRecord: bigint;
     /** The original digits, so precision is never lost to a round-trip. */
     readonly onsetRaw: string;
     readonly durationSeconds: number | undefined;

package/dist/types.d.ts.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "edfcore",
-  "version": "0.2.8",
+  "version": "0.2.10",
   "description": "Modern, typed, zero-dependency reader for EDF, EDF+, BDF and BDF+ biosignal files. Works in browsers and Node with true random access.",
   "keywords": [
     "edf",

package/src/annotations-query.ts

@@ -9,7 +9,14 @@
  * `a.onsetSecondsFromFirstRecord >= from && ... < to`, and those are float64 seconds converted
  * from exact tick counts. An onset stored as `+30.0000001` and a bound of `30.0000001` need not
  * compare equal once both have been through a division by 10,000,000. Every comparison here is on
- * `onsetTicks`, which is exact, and the bounds are converted to ticks once.
+ * ticks, which are exact, and the bounds are converted to ticks once.
+ *
+ * The ticks compared are `onsetTicksFromFirstRecord`, not `onsetTicks`. The window is in the same
+ * seconds `resolveTimeWindow` and `readWindow` take, and those put `t = 0` at the start of record
+ * 0; `onsetTicks` is on the header's timebase, which sits up to a second earlier when the file
+ * declares a sub-second start offset in record 0's timekeeping TAL. Comparing against the wrong
+ * one puts events in the neighbouring window on exactly the files that bother to state their
+ * offset.
  */
 
 import { secondsToTicks } from './tal/ticks.js';
@@ -33,7 +40,7 @@ export function filterAnnotationsByTime(
 
   return Object.freeze(
     annotations.filter((annotation) => {
-      const onset = annotation.onsetTicks;
+      const onset = annotation.onsetTicksFromFirstRecord;
       const end = onset + (annotation.durationTicks ?? 0n);
       // Half-open on both sides: [onset, end) against [from, to).
       return (
@@ -98,7 +105,7 @@ export function annotationsAt(
   const at = secondsToTicks(seconds);
   return Object.freeze(
     annotations.filter((annotation) => {
-      const onset = annotation.onsetTicks;
+      const onset = annotation.onsetTicksFromFirstRecord;
       const duration = annotation.durationTicks ?? 0n;
       return duration === 0n ? onset === at : onset <= at && at < onset + duration;
     }),

package/src/constants.ts

@@ -93,4 +93,4 @@ export const SIGNAL_FIELD_BLOCK_OFFSETS = {
 } as const;
 
 /** Published package version. Kept in sync with package.json by a test. */
-export const VERSION = '0.2.8';
+export const VERSION = '0.2.10';

package/src/decode/physical.ts

@@ -197,6 +197,41 @@ export function toPhysical(
   return physical;
 }
 
+/**
+ * The signal's declared physical bounds, in ascending order.
+ *
+ * `signal.physicalMinimum` is not the smaller of the two. A negative amplifier gain is declared
+ * by putting the larger value in the minimum field, it is legal, and edfcore never "fixes" it —
+ * so `{ low: signal.physicalMinimum, high: signal.physicalMaximum }` written by hand gives a
+ * viewer an inverted y-axis on exactly the channels where the trace is also inverted, and the
+ * two mistakes hide each other.
+ *
+ * This is the DECLARED envelope, not the observed one: samples outside it exist (that is what
+ * `outOfDigitalRangeCount` counts) and this function does not look at any. It is what a fixed
+ * axis or a gain control should be built from.
+ *
+ * Throws `RangeError` when either bound is not finite, for the reason `clampToDigitalRange`
+ * does: `Math.min(NaN, x)` is `NaN`, and an axis from `NaN` to `NaN` draws nothing while
+ * reporting no error at all.
+ */
+export function physicalRangeOf(signal: EdfSignal): {
+  readonly low: number;
+  readonly high: number;
+} {
+  const { physicalMinimum, physicalMaximum } = signal;
+  if (!Number.isFinite(physicalMinimum) || !Number.isFinite(physicalMaximum)) {
+    throw new RangeError(
+      `signal ${signal.index} "${signal.label}" declares physical minimum ` +
+        `"${signal.raw.physicalMinimum}" and physical maximum "${signal.raw.physicalMaximum}", ` +
+        'which do not both parse as numbers, so it has no physical range. Next: read ' +
+        'header.diagnostics for this signal.',
+    );
+  }
+  return physicalMinimum <= physicalMaximum
+    ? { low: physicalMinimum, high: physicalMaximum }
+    : { low: physicalMaximum, high: physicalMinimum };
+}
+
 /**
  * Clamp to the declared digital range. POST-HOC ONLY — nothing on the read path calls this.
  *

package/src/index.ts

@@ -128,7 +128,7 @@ export {
 
 export { decodeHeaderLatin1 } from './bytes/latin1.js';
 export { decodeDigital } from './decode/digital.js';
-export { clampToDigitalRange, toPhysical } from './decode/physical.js';
+export { clampToDigitalRange, physicalRangeOf, toPhysical } from './decode/physical.js';
 export { formatDiagnostics } from './diagnostics/format.js';
 export { formatStartTimeNaive } from './header/dates.js';
 export {

package/src/tal/annotations.ts

@@ -463,6 +463,10 @@ export function decodeAnnotations(
     onsetSecondsFromHeaderStart: ticksToSeconds(item.onsetTicks),
     onsetSecondsFromFirstRecord: ticksToSeconds(item.onsetTicks - startOffsetTicks),
     onsetTicks: item.onsetTicks,
+    // The exact form of the line above. Saturating rather than wrapping, for the same reason
+    // record onsets do: an onset already at the edge of the int64 range must not come back as a
+    // large positive number after a subtraction.
+    onsetTicksFromFirstRecord: saturateToInt64(item.onsetTicks - startOffsetTicks),
     onsetRaw: item.onsetRaw,
     durationSeconds:
       item.durationTicks === undefined ? undefined : ticksToSeconds(item.durationTicks),

package/src/types.ts

@@ -481,8 +481,22 @@ export interface EdfAnnotation {
   readonly onsetSecondsFromHeaderStart: number;
   /** Rebased to the first record's true start — the EDFlib/pyEDFlib/MNE convention. */
   readonly onsetSecondsFromFirstRecord: number;
-  /** Exact, in 100 ns units. Compare event times with this, never with the floats. */
+  /**
+   * Exact, in 100 ns units, on the HEADER's timebase — the number the file wrote, unrebased.
+   *
+   * This is the right field for comparing one annotation against another, and the wrong one for
+   * comparing an annotation against a window: `resolveTimeWindow`, `readWindow` and `readEnvelope`
+   * all put `t = 0` at the start of record 0, which is `onsetTicksFromFirstRecord`.
+   */
   readonly onsetTicks: bigint;
+  /**
+   * Exact, in 100 ns units, on the same axis as every read in the package: `t = 0` is the start of
+   * record 0. This is `onsetSecondsFromFirstRecord` without the float.
+   *
+   * It differs from `onsetTicks` by the sub-second start offset a file may declare in record 0's
+   * timekeeping TAL, so the two are equal on most files and up to a second apart on some.
+   */
+  readonly onsetTicksFromFirstRecord: bigint;
   /** The original digits, so precision is never lost to a round-trip. */
   readonly onsetRaw: string;
   readonly durationSeconds: number | undefined;