edfcore 0.1.5 → 0.1.7

package/dist/record-index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"record-index.d.ts","sourceRoot":"","sources":["../src/record-index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAcH,OAAO,KAAK,EACV,iBAAiB,EACjB,UAAU,EAIV,SAAS,EAET,cAAc,EACd,YAAY,EAEZ,WAAW,EACX,WAAW,EAGZ,MAAM,YAAY,CAAC;AAWpB,8FAA8F;AAC9F,wBAAgB,gBAAgB,CAAC,MAAM,EAAE,SAAS,EAAE,mBAAmB,CAAC,EAAE,MAAM,GAAG,MAAM,CAOxF;AAkKD;;;;;;;;;;GAUG;AACH,wBAAsB,aAAa,CACjC,MAAM,EAAE,UAAU,EAClB,MAAM,EAAE,SAAS,EACjB,OAAO,CAAC,EAAE,WAAW,GACpB,OAAO,CAAC;IAAE,QAAQ,EAAE,WAAW,CAAC;IAAC,KAAK,EAAE,cAAc,CAAA;CAAE,CAAC,CAkE3D;AAmDD;;;;;;;;;;GAUG;AACH,wBAAsB,gBAAgB,CACpC,SAAS,EAAE,YAAY,EACvB,OAAO,CAAC,EAAE,iBAAiB,GAC1B,OAAO,CAAC,cAAc,CAAC,CAyBzB"}
+{"version":3,"file":"record-index.d.ts","sourceRoot":"","sources":["../src/record-index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAeH,OAAO,KAAK,EACV,iBAAiB,EACjB,UAAU,EAIV,SAAS,EAET,cAAc,EACd,YAAY,EAEZ,WAAW,EACX,WAAW,EAGZ,MAAM,YAAY,CAAC;AAWpB,8FAA8F;AAC9F,wBAAgB,gBAAgB,CAAC,MAAM,EAAE,SAAS,EAAE,mBAAmB,CAAC,EAAE,MAAM,GAAG,MAAM,CAOxF;AAwKD;;;;;;;;;;GAUG;AACH,wBAAsB,aAAa,CACjC,MAAM,EAAE,UAAU,EAClB,MAAM,EAAE,SAAS,EACjB,OAAO,CAAC,EAAE,WAAW,GACpB,OAAO,CAAC;IAAE,QAAQ,EAAE,WAAW,CAAC;IAAC,KAAK,EAAE,cAAc,CAAA;CAAE,CAAC,CAkE3D;AAmDD;;;;;;;;;;GAUG;AACH,wBAAsB,gBAAgB,CACpC,SAAS,EAAE,YAAY,EACvB,OAAO,CAAC,EAAE,iBAAiB,GAC1B,OAAO,CAAC,cAAc,CAAC,CAyBzB"}

package/dist/record-index.js

@@ -26,10 +26,11 @@
  * full bytes, and reading less would mean reimplementing that rule here.
  */
 import { DEFAULT_MAX_MATERIALIZE_BYTES } from './constants.js';
+import { appendDiagnostics } from './diagnostics/collector.js';
 import { EdfRangeError } from './errors.js';
 import { readRecordBytes } from './io/read.js';
 import { decodeAnnotations } from './tal/annotations.js';
-import { secondsToTicks, ticksToSeconds } from './tal/ticks.js';
+import { saturateToInt64, secondsToTicks, ticksToSeconds } from './tal/ticks.js';
 import { buildSegmentation } from './time/segments.js';
 import { assertMonotonicOnsetArray, assertMonotonicOnsets, buildTimelineFromProbes, } from './time/timeline.js';
 /**
@@ -54,7 +55,13 @@ export function scanChunkRecords(header, maxMaterializeBytes) {
  * definition for a plain EDF or BDF file, where record onsets are not stored at all.
  */
 function nominalOnsetTicks(header, recordIndex) {
-    return BigInt(recordIndex) * header.recordDurationTicks;
+    // Saturated, because every onset array here is a BigInt64Array and assignment to one wraps
+    // rather than throwing. A file with no annotation channel gets its onsets purely from this
+    // arithmetic, so an overflowing recordDuration produced an array that jumped backwards — read
+    // downstream as one segment per record with negative gaps, reported as a 'complete' index with
+    // no diagnostic at all. decodeAnnotations already saturated its own derived onsets; this path
+    // was the one that did not.
+    return saturateToInt64(BigInt(recordIndex) * header.recordDurationTicks);
 }
 /** True when the file stores per-record onsets, i.e. when probing can learn anything. */
 function hasTimekeeping(header) {
@@ -200,7 +207,7 @@ export async function buildTimeline(source, header, options) {
         // fake a discontinuity in a conforming file and make readWindow refuse every window in it.
         const probe = await probeOnset(source, header, recordIndex, probeOptions(options, memo.get(0)));
         memo.set(recordIndex, probe.ticks);
-        probeDiagnostics.push(...probe.diagnostics);
+        appendDiagnostics(probeDiagnostics, probe.diagnostics);
         probes.push({ recordIndex, onsetTicks: probe.ticks });
     }
     const timeline = buildTimelineFromProbes({ header, probes, probeDiagnostics }, options);

package/dist/record-index.js.map

@@ -1 +1 @@
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package/dist/tal/annotations.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"annotations.d.ts","sourceRoot":"","sources":["../../src/tal/annotations.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAgCG;AAMH,OAAO,KAAK,EACV,wBAAwB,EAExB,oBAAoB,EACpB,SAAS,EAET,WAAW,EACZ,MAAM,aAAa,CAAC;AAmTrB,wBAAgB,iBAAiB,CAC/B,MAAM,EAAE,SAAS,EACjB,WAAW,EAAE,UAAU,EACvB,OAAO,EAAE,WAAW,EACpB,OAAO,CAAC,EAAE,wBAAwB,GACjC,oBAAoB,CA4ItB"}
+{"version":3,"file":"annotations.d.ts","sourceRoot":"","sources":["../../src/tal/annotations.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAgCG;AAMH,OAAO,KAAK,EACV,wBAAwB,EAExB,oBAAoB,EACpB,SAAS,EAET,WAAW,EACZ,MAAM,aAAa,CAAC;AAqSrB,wBAAgB,iBAAiB,CAC/B,MAAM,EAAE,SAAS,EACjB,WAAW,EAAE,UAAU,EACvB,OAAO,EAAE,WAAW,EACpB,OAAO,CAAC,EAAE,wBAAwB,GACjC,oBAAoB,CA4ItB"}

package/dist/tal/annotations.js

@@ -36,7 +36,7 @@ import { TICKS_PER_SECOND } from '../constants.js';
 import { DiagnosticSink } from '../diagnostics/collector.js';
 import { EdfRangeError } from '../errors.js';
 import { parseTalRegion, previewBytes, splitChannelLabel, TAL_PREVIEW_MAX_BYTES, } from './grammar.js';
-import { ticksToSeconds } from './ticks.js';
+import { saturateToInt64, ticksToSeconds } from './ticks.js';
 const ANNOTATIONS_SPEC = "EDF+ specification 2.2 (the 'EDF Annotations' signal)";
 const TIMEKEEPING_SPEC = 'EDF+ specification 2.2.1 (time keeping of data records)';
 const ONSET_SPEC = 'EDF+ specification 2.2.4 (onsets are relative to the startdate/starttime)';
@@ -66,20 +66,6 @@ const ISSUE_SPEC_REFERENCES = {
 };
 /** Enough of a region to show what went wrong, without copying a 60 KB region per diagnostic. */
 const RAW_EVIDENCE_MAX_BYTES = TAL_PREVIEW_MAX_BYTES;
-/**
- * A `BigInt64Array` wraps silently on assignment, so a derived onset is saturated rather than
- * wrapped. Reaching either bound needs a declared geometry that is already impossible (~29,000
- * years of records); saturating keeps the array non-decreasing where wrapping would invert it.
- */
-const INT64_MIN = -(2n ** 63n);
-const INT64_MAX = 2n ** 63n - 1n;
-function saturateToInt64(ticks) {
-    if (ticks > INT64_MAX)
-        return INT64_MAX;
-    if (ticks < INT64_MIN)
-        return INT64_MIN;
-    return ticks;
-}
 function describeRange(range) {
     return `{ start: ${range.start}, count: ${range.count} }`;
 }

package/dist/tal/annotations.js.map

@@ -1 +1 @@
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package/dist/tal/ticks.d.ts

@@ -54,6 +54,21 @@ export declare function parseUnsignedTicks(text: string): TickParse;
  * the sum is correct for negative onsets.
  */
 export declare function ticksToSeconds(ticks: bigint): number;
+/**
+ * Clamps a tick count to what a `BigInt64Array` element can hold.
+ *
+ * Assignment to a `BigInt64Array` wraps modulo 2^64 rather than throwing, and every onset array
+ * in edfcore is one. Wrapping turns a monotonically increasing series into one that jumps
+ * backwards, which downstream code reads as a genuine discontinuity: a file whose declared
+ * record duration overflows the range then indexes as one segment per record, with negative
+ * gaps between them and no diagnostic anywhere.
+ *
+ * Saturating keeps the array non-decreasing, so an absurd geometry stays visibly absurd instead
+ * of becoming plausibly wrong. Reaching either bound needs a declared geometry that is already
+ * impossible — over 29,000 years of records — but `recordDuration` is a free-form ASCII field
+ * that accepts exponent notation, so three bytes are enough to ask for it.
+ */
+export declare function saturateToInt64(ticks: bigint): bigint;
 /**
  * Seconds to ticks, rounded to the NEAREST tick (ties away from zero is not required; ties go
  * toward +Infinity, as `Math.round` does).

package/dist/tal/ticks.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ticks.d.ts","sourceRoot":"","sources":["../../src/tal/ticks.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAIH;;;;GAIG;AACH,MAAM,WAAW,SAAS;IACxB;;;OAGG;IACH,QAAQ,CAAC,EAAE,EAAE,OAAO,CAAC;IACrB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;IACvB,wFAAwF;IACxF,QAAQ,CAAC,GAAG,EAAE,MAAM,CAAC;IACrB,mDAAmD;IACnD,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;CAC1B;AAwED;;;;;;;;;;GAUG;AACH,wBAAgB,gBAAgB,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,CAOxD;AAED;;;;;GAKG;AACH,wBAAgB,kBAAkB,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,CAQ1D;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,cAAc,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAIpD;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,cAAc,CAAC,OAAO,EAAE,MAAM,GAAG,MAAM,CAQtD"}
+{"version":3,"file":"ticks.d.ts","sourceRoot":"","sources":["../../src/tal/ticks.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAIH;;;;GAIG;AACH,MAAM,WAAW,SAAS;IACxB;;;OAGG;IACH,QAAQ,CAAC,EAAE,EAAE,OAAO,CAAC;IACrB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;IACvB,wFAAwF;IACxF,QAAQ,CAAC,GAAG,EAAE,MAAM,CAAC;IACrB,mDAAmD;IACnD,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;CAC1B;AAwED;;;;;;;;;;GAUG;AACH,wBAAgB,gBAAgB,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,CAOxD;AAED;;;;;GAKG;AACH,wBAAgB,kBAAkB,CAAC,IAAI,EAAE,MAAM,GAAG,SAAS,CAQ1D;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,cAAc,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAIpD;AAKD;;;;;;;;;;;;;GAaG;AACH,wBAAgB,eAAe,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAIrD;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,cAAc,CAAC,OAAO,EAAE,MAAM,GAAG,MAAM,CAQtD"}

package/dist/tal/ticks.js

@@ -116,6 +116,29 @@ export function ticksToSeconds(ticks) {
     const remainder = ticks % TICKS_PER_SECOND;
     return Number(wholeSeconds) + Number(remainder) / TICKS_PER_SECOND_FLOAT;
 }
+const INT64_MIN = -(2n ** 63n);
+const INT64_MAX = 2n ** 63n - 1n;
+/**
+ * Clamps a tick count to what a `BigInt64Array` element can hold.
+ *
+ * Assignment to a `BigInt64Array` wraps modulo 2^64 rather than throwing, and every onset array
+ * in edfcore is one. Wrapping turns a monotonically increasing series into one that jumps
+ * backwards, which downstream code reads as a genuine discontinuity: a file whose declared
+ * record duration overflows the range then indexes as one segment per record, with negative
+ * gaps between them and no diagnostic anywhere.
+ *
+ * Saturating keeps the array non-decreasing, so an absurd geometry stays visibly absurd instead
+ * of becoming plausibly wrong. Reaching either bound needs a declared geometry that is already
+ * impossible — over 29,000 years of records — but `recordDuration` is a free-form ASCII field
+ * that accepts exponent notation, so three bytes are enough to ask for it.
+ */
+export function saturateToInt64(ticks) {
+    if (ticks > INT64_MAX)
+        return INT64_MAX;
+    if (ticks < INT64_MIN)
+        return INT64_MIN;
+    return ticks;
+}
 /**
  * Seconds to ticks, rounded to the NEAREST tick (ties away from zero is not required; ties go
  * toward +Infinity, as `Math.round` does).

package/dist/tal/ticks.js.map

@@ -1 +1 @@
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package/dist/types.d.ts

@@ -307,6 +307,55 @@ export interface EdfChunk {
     readonly precededByGap: EdfGap | undefined;
     readonly diagnostics: readonly EdfDiagnostic[];
 }
+/**
+ * One signal's min/max envelope over a window, at a resolution the caller chose.
+ *
+ * The unit is the bucket, not the sample: `min[i]` and `max[i]` are the extremes of every sample
+ * that fell in bucket `i`. Drawing a twelve-hour recording into a thousand pixels needs exactly
+ * this and nothing else — the peaks are what a reader of an EEG trace is looking at, and they
+ * are the first thing naive subsampling throws away.
+ */
+export interface EdfEnvelopeSignal {
+    readonly signalIndex: number;
+    /** Digital extremes per bucket. Convert with `toPhysicalEnvelope`, never with `toPhysical`. */
+    readonly min: Int32Array;
+    readonly max: Int32Array;
+    /** Samples that landed in each bucket. Zero where the window had no samples to cover it. */
+    readonly counts: Int32Array;
+    /** Total samples reduced, i.e. the sum of `counts`. */
+    readonly sampleCount: number;
+    readonly firstSampleIndex: number;
+    readonly startSeconds: number;
+    readonly outOfDigitalRangeCount: number;
+}
+/** A contiguous run of records, reduced to buckets. One per run, exactly as `readWindow` splits. */
+export interface EdfEnvelopeChunk {
+    readonly records: RecordRange;
+    readonly startSeconds: number;
+    readonly durationSeconds: number;
+    /** Buckets actually filled. Never more than requested, and fewer for a short run. */
+    readonly bucketCount: number;
+    readonly secondsPerBucket: number;
+    readonly byteLength: number;
+    readonly signals: readonly EdfEnvelopeSignal[];
+    readonly precededByGap: EdfGap | undefined;
+    readonly diagnostics: readonly EdfDiagnostic[];
+}
+export interface EnvelopeSelection extends WindowSelection {
+    /**
+     * How many buckets to reduce the window into — in a viewer, the pixel width of the plot.
+     *
+     * A bucket per pixel is the point: asking for more buckets than the window has samples wastes
+     * work and yields empty buckets, so the count is clamped to the sample count of the densest
+     * signal in the run.
+     */
+    readonly buckets: number;
+}
+/** A physical-unit envelope. Separate from the digital one for the same reason `toPhysical` is. */
+export interface EdfPhysicalEnvelope {
+    readonly min: Float64Array;
+    readonly max: Float64Array;
+}
 export interface EdfAnnotation {
     /** Verbatim on-disk value, relative to the header startdate/starttime (EDF+ 2.2.4). */
     readonly onsetSecondsFromHeaderStart: number;

package/dist/types.d.ts.map

@@ -1 +1 @@
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package/dist/validate.js

@@ -20,7 +20,7 @@
 import { trimEdfField } from './bytes/latin1.js';
 import { DEFAULT_MAX_MATERIALIZE_BYTES, EDF_RECOMMENDED_MAX_RECORD_BYTES } from './constants.js';
 import { decodeDigitalCounted } from './decode/digital.js';
-import { createDiagnostic } from './diagnostics/collector.js';
+import { appendDiagnostics, createDiagnostic } from './diagnostics/collector.js';
 import { EdfBudgetError } from './errors.js';
 import { calendarDatesEqual, formatCalendarDate, isValidCalendarDate } from './header/dates.js';
 import { signalFieldOffset } from './header/signals.js';
@@ -420,7 +420,7 @@ async function traverse(recording, options, scanSamples) {
             originTicks: recording.timeline.startOffsetTicks,
         });
         onsets.set(decoded.recordOnsetTicks, records.start);
-        diagnostics.push(...decoded.diagnostics);
+        appendDiagnostics(diagnostics, decoded.diagnostics);
         for (const accumulator of accumulators) {
             const digital = decodeDigitalCounted(header, bytes, records, accumulator.signalIndex, scratch, options);
             const samples = digital.digital;
@@ -476,7 +476,7 @@ export async function validateRecording(recording, options) {
     const mustReadOnsets = supplied === undefined && !onsetsAreArithmetic;
     const traversal = scanSamples || mustReadOnsets ? await traverse(recording, options, scanSamples) : undefined;
     if (traversal !== undefined)
-        diagnostics.push(...traversal.diagnostics);
+        appendDiagnostics(diagnostics, traversal.diagnostics);
     let segmentCount;
     let gaps;
     if (supplied?.segments !== undefined && supplied.gaps !== undefined) {

package/dist/validate.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "edfcore",
-  "version": "0.1.5",
+  "version": "0.1.7",
   "description": "Modern, typed, zero-dependency reader for EDF, EDF+, BDF and BDF+ biosignal files. Works in browsers and Node with true random access.",
   "keywords": [
     "edf",

package/src/constants.ts

@@ -93,4 +93,4 @@ export const SIGNAL_FIELD_BLOCK_OFFSETS = {
 } as const;
 
 /** Published package version. Kept in sync with package.json by a test. */
-export const VERSION = '0.1.5';
+export const VERSION = '0.1.7';

package/src/diagnostics/codes.ts

@@ -36,6 +36,7 @@ export type EdfKnownDiagnosticCode =
   | 'RECORD_SIZE_ZERO'
   | 'EDFPLUS_WITHOUT_ANNOTATION_SIGNAL'
   | 'TIMELINE_NOT_MONOTONIC'
+  | 'RECORDING_SPAN_UNREPRESENTABLE'
   // Deferred-fatal: header parses, scaling does not
   | 'DEGENERATE_DIGITAL_RANGE'
   | 'DEGENERATE_PHYSICAL_RANGE'
@@ -95,6 +96,7 @@ const DISPOSITIONS: Readonly<Record<EdfKnownDiagnosticCode, EdfDiagnosticDisposi
   EDFPLUS_WITHOUT_ANNOTATION_SIGNAL: 'fatal',
   /** Record onsets went backwards. Every time-based answer would be wrong. */
   TIMELINE_NOT_MONOTONIC: 'fatal',
+  RECORDING_SPAN_UNREPRESENTABLE: 'fatal',
 
   // ---- Deferred-fatal: header parses, scaling does not -----------------------
   /** digitalMinimum === digitalMaximum. Division by zero. EDF+ spec item 5. */

package/src/diagnostics/collector.ts

@@ -39,6 +39,23 @@ export interface DiagnosticInit {
   readonly specReference?: string;
 }
 
+/**
+ * Appends every diagnostic in `source` to `target`, without an argument spread.
+ *
+ * `target.push(...source)` passes each element as a separate call argument, and V8 throws
+ * `RangeError: Maximum call stack size exceeded` past roughly 125,000 of them. Several
+ * diagnostics are deliberately reported once per record — `TIMEKEEPING_TAL_MISSING` names the
+ * record whose onset it had to derive — so a long recording with a systematically damaged
+ * annotation section reaches that count honestly. A 32 MiB file with 130,000 records is enough.
+ *
+ * The failure was worse than a crash: the thrown value is a bare `RangeError` about the call
+ * stack, so it is neither an `EdfError` nor a caller mistake, and it lands in the one function
+ * whose whole purpose is to survive being pointed at an untrusted file.
+ */
+export function appendDiagnostics(target: EdfDiagnostic[], source: readonly EdfDiagnostic[]): void {
+  for (const diagnostic of source) target.push(diagnostic);
+}
+
 export function createDiagnostic(init: DiagnosticInit): EdfDiagnostic {
   return {
     code: init.code,